BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00025251
         (1137 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [A...   291   3e-76
ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, ...   280   8e-73
ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II su...   280   8e-73
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   278   2e-72
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   278   2e-72
ref|XP_007042502.1| DNA-directed RNA polymerase family protein [...   276   1e-71
ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polype...   275   3e-71
ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   275   3e-71
ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II su...   275   3e-71
ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Caps...   274   4e-71
ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prun...   274   4e-71
ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II su...   274   6e-71
gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus not...   273   1e-70
ref|NP_179145.1| DNA-directed RNA polymerase II subunit RPB3-A [...   272   2e-70
ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata] gi...   271   3e-70
ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phas...   271   4e-70
ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citr...   270   8e-70
gb|AAM65319.1| DNA-directed RNA polymerase II, third largest sub...   269   1e-69
ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutr...   268   3e-69
ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II su...   268   3e-69

>ref|XP_006853170.1| hypothetical protein AMTR_s00038p00194050 [Amborella trichopoda]
           gi|548856809|gb|ERN14637.1| hypothetical protein
           AMTR_s00038p00194050 [Amborella trichopoda]
          Length = 324

 Score =  291 bits (745), Expect = 3e-76
 Identities = 146/175 (83%), Positives = 161/175 (92%), Gaps = 1/175 (0%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPK+KIREMKD+YLKFELRETD SMANALRRIM+AEVPTIAI+LVEIE NS+
Sbjct: 1   MEGVSYQRFPKVKIREMKDDYLKFELRETDPSMANALRRIMLAEVPTIAIDLVEIEANSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEFLAHRLGLIPLTS+KAM MRFSRDCDACDGDGQCEYCSVEF LSV+CD DQTLDV
Sbjct: 61  VLNDEFLAHRLGLIPLTSEKAMSMRFSRDCDACDGDGQCEYCSVEFQLSVKCDSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAAR-STSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TSADL+++D +VIPVDVA     S  FD++E +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSADLVSSDIHVIPVDVAGRGMDSNGFDASEQRGIIIVKLRRGQELRLRAIARKG 175


>ref|XP_006348609.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 3-like
           [Solanum tuberosum]
          Length = 319

 Score =  280 bits (716), Expect = 8e-73
 Identities = 138/174 (79%), Positives = 160/174 (91%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPKIKIRE+KD+++KFELRETD S+ANALRRIMIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGVSYQRFPKIKIREVKDDFMKFELRETDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF++HRLGL+PLTS++AM MRFSRDCDACDGDGQCEYCSVEF+L V+C  DQTLDV
Sbjct: 61  VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DLL++D  V+PVD ++   S+SFD+  NKGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLLSSDHTVVPVDYSDT--SSSFDNTPNKGIIIVKLRRGQELRLRAIARKG 172


>ref|XP_004238992.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Solanum lycopersicum]
          Length = 319

 Score =  280 bits (716), Expect = 8e-73
 Identities = 137/174 (78%), Positives = 161/174 (92%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPKIK+RE+KD+++KFELR+TD S+ANALRRIMIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGVSYQRFPKIKVREVKDDFMKFELRDTDASIANALRRIMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF++HRLGL+PLTS++AM MRFSRDCDACDGDGQCEYCSVEF+L V+C  DQTLDV
Sbjct: 61  VLNDEFISHRLGLVPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DLL++D  V+PVD ++A  S+SFD+  NKGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLLSSDHTVVPVDYSDA--SSSFDNTPNKGIIIVKLRRGQELRLRAIARKG 172


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score =  278 bits (712), Expect = 2e-72
 Identities = 136/174 (78%), Positives = 158/174 (90%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPKIKIRE+KD+Y KFELRETD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL+++D  V+PVD ++   S+ +DSA+ KGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLISSDHTVVPVDFSD---SSGYDSADKKGIIIVKLRRGQELRLRAIARKG 171


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  278 bits (712), Expect = 2e-72
 Identities = 136/174 (78%), Positives = 158/174 (90%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPKIKIRE+KD+Y KFELRETD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1   MEGVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  D+TLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL+++D  V+PVD ++   S+ +DSA+ KGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLISSDHTVVPVDFSD---SSGYDSADKKGIIIVKLRRGQELRLRAIARKG 171


>ref|XP_007042502.1| DNA-directed RNA polymerase family protein [Theobroma cacao]
           gi|508706437|gb|EOX98333.1| DNA-directed RNA polymerase
           family protein [Theobroma cacao]
          Length = 318

 Score =  276 bits (706), Expect = 1e-71
 Identities = 135/174 (77%), Positives = 156/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG+SYQRFPK+KIRE+KD+Y KFELR+TD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGVSYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D  V+PVD  ++A    +DS+E +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHTVVPVDFTDSA---GYDSSEQRGIIIVKLRRGQELRLRAIARKG 171


>ref|XP_002313865.2| DNA-directed RNA polymerase II 36 kDa polypeptide B family protein
           [Populus trichocarpa] gi|550331423|gb|EEE87820.2|
           DNA-directed RNA polymerase II 36 kDa polypeptide B
           family protein [Populus trichocarpa]
          Length = 323

 Score =  275 bits (703), Expect = 3e-71
 Identities = 140/176 (79%), Positives = 156/176 (88%), Gaps = 2/176 (1%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           ME +SYQRFPKIKIREMKD+YLKFELRETD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MESVSYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AMGMRFSRDCDACDGDGQCEYCSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTS-FDSAE-NKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D  VIPVD ++ + +   FD  E  +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQELRLRAIARKG 176


>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score =  275 bits (703), Expect = 3e-71
 Identities = 134/174 (77%), Positives = 156/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SYQRFP+IKIRE+KD+Y KFELR+TD SMANALRR+MIAEVPT+AI+LVEIEVNS+
Sbjct: 1   MEGASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQC+YCSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D  V+PVD ++   S+ +DS+E +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHTVVPVDFSD---SSGYDSSEQRGIIIVKLRRGQELRLRAIARKG 171


>ref|XP_004304034.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Fragaria vesca subsp. vesca]
          Length = 318

 Score =  275 bits (702), Expect = 3e-71
 Identities = 132/174 (75%), Positives = 157/174 (90%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SYQRFP++KIREM+ +YLKFELR+TD S+ANALRR+MIAEVPT+AI+LVEIE+NS+
Sbjct: 1   MEGKSYQRFPRVKIREMRHDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTSD+AM MRFSRDCDACDGDGQCEYCSVEFHL  RC  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEYCSVEFHLRARCHSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS +LL++D  V+PVD ++A   + ++++E +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKELLSSDHTVVPVDFSDA---SGYEASEQRGIIIVKLRRGQELRLRAIARKG 171


>ref|XP_006298158.1| hypothetical protein CARUB_v10014208mg [Capsella rubella]
           gi|482566867|gb|EOA31056.1| hypothetical protein
           CARUB_v10014208mg [Capsella rubella]
          Length = 319

 Score =  274 bits (701), Expect = 4e-71
 Identities = 136/174 (78%), Positives = 156/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           M+G +YQRFPK+KIRE+KD+Y KFELRETDVSMANALRR+MI+EVPT+AI+LVEIEVNS+
Sbjct: 1   MDGATYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEF LS +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL +ADP V PVD      S++ DS+E+KGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSRDLYSADPTVTPVDF--TIDSSASDSSEHKGIIIVKLRRGQELRLRAIARKG 172


>ref|XP_007201816.1| hypothetical protein PRUPE_ppa008812mg [Prunus persica]
           gi|462397216|gb|EMJ03015.1| hypothetical protein
           PRUPE_ppa008812mg [Prunus persica]
          Length = 318

 Score =  274 bits (701), Expect = 4e-71
 Identities = 132/174 (75%), Positives = 156/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SYQR P++KIREM+D+Y+KFELR+TD S+ANALRR+MIAEVPT+AI+LVEIE+NS+
Sbjct: 1   MEGKSYQRLPRVKIREMRDDYMKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTSD+AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DLL++D  V+PVD +++A     +S+E KGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLLSSDHTVVPVDFSDSA---GMESSEQKGIIIVKLRRGQELRLRAIARKG 171


>ref|XP_004138895.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cucumis sativus]
          Length = 320

 Score =  274 bits (700), Expect = 6e-71
 Identities = 133/174 (76%), Positives = 156/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SYQRFPK+KIRE++D+Y KFELR+TD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGSSYQRFPKVKIRELRDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D  V+PVD +++A +T  ++ + KGIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHTVVPVDFSDSAAATG-EALDTKGIIIVKLRRGQELRLRAIARKG 173


>gb|EXC17267.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
          Length = 588

 Score =  273 bits (698), Expect = 1e-70
 Identities = 136/174 (78%), Positives = 153/174 (87%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SYQRFPK+KIREMKD+YLKFELR+TD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGKSYQRFPKVKIREMKDDYLKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTSD+AM MRFSRDCDACDGDGQCE+CSVEF L  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFLLRAKCISDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL TAD  V+P+D ++ A     +S + +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYTADHTVVPIDFSDPAGD---ESGDQRGIIIVKLRRGQELRLRAIARKG 171


>ref|NP_179145.1| DNA-directed RNA polymerase II subunit RPB3-A [Arabidopsis
           thaliana] gi|11134646|sp|Q39211.1|NRPB3_ARATH RecName:
           Full=DNA-directed RNA polymerases II, IV and V subunit
           3; AltName: Full=DNA-directed RNA polymerase II 36 kDa
           polypeptide A; AltName: Full=DNA-directed RNA polymerase
           II subunit RPB3-A; Short=RNA polymerase II subunit 3-A;
           Short=RNA polymerase II subunit B3-A
           gi|514318|gb|AAB03741.1| RNA polymerase II third largest
           subunit [Arabidopsis thaliana] gi|4544370|gb|AAD22281.1|
           DNA-directed RNA polymerase II, third largest subunit
           [Arabidopsis thaliana] gi|17381018|gb|AAL36321.1|
           putative DNA-directed RNA polymerase II third largest
           subunit [Arabidopsis thaliana]
           gi|20465883|gb|AAM20046.1| putative DNA-directed RNA
           polymerase II [Arabidopsis thaliana]
           gi|330251306|gb|AEC06400.1| DNA-directed RNA polymerase
           II subunit RPB3-A [Arabidopsis thaliana]
          Length = 319

 Score =  272 bits (696), Expect = 2e-70
 Identities = 136/174 (78%), Positives = 155/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           M+G +YQRFPKIKIRE+KD+Y KFELRETDVSMANALRR+MI+EVPT+AI+LVEIEVNS+
Sbjct: 1   MDGATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEF LS +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL +ADP V PVD      S+  DS+E+KGIIIVKLRRGQEL+LRAIARKG
Sbjct: 121 TSRDLYSADPTVTPVDF--TIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKG 172


>ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
           gi|297329735|gb|EFH60154.1| RBP36A [Arabidopsis lyrata
           subsp. lyrata]
          Length = 319

 Score =  271 bits (694), Expect = 3e-70
 Identities = 135/174 (77%), Positives = 154/174 (88%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           M+G +YQRFPKI IRE+KD+Y KFELRETDVSMANALRR+MI+EVPT+AI+LVEIEVNS+
Sbjct: 1   MDGATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEF LS +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL +ADP V PVD      S++ DS+E KGIIIVKLRRGQEL+LRAIARKG
Sbjct: 121 TSRDLYSADPTVTPVDF--TIDSSASDSSEQKGIIIVKLRRGQELKLRAIARKG 172


>ref|XP_007157771.1| hypothetical protein PHAVU_002G097400g [Phaseolus vulgaris]
           gi|561031186|gb|ESW29765.1| hypothetical protein
           PHAVU_002G097400g [Phaseolus vulgaris]
          Length = 318

 Score =  271 bits (693), Expect = 4e-70
 Identities = 132/174 (75%), Positives = 157/174 (90%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SY R P++KIRE+KD+Y KFELR+TD S+ANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MEGASYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL V+C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           +S DL ++DP+V+PVD ++ A   S DS+E++G+IIVKLRRGQELRLRAIARKG
Sbjct: 121 SSKDLYSSDPSVVPVDFSDPA---STDSSESRGVIIVKLRRGQELRLRAIARKG 171


>ref|XP_006422955.1| hypothetical protein CICLE_v10028849mg [Citrus clementina]
           gi|568867393|ref|XP_006487022.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 3-like [Citrus
           sinensis] gi|557524889|gb|ESR36195.1| hypothetical
           protein CICLE_v10028849mg [Citrus clementina]
          Length = 319

 Score =  270 bits (690), Expect = 8e-70
 Identities = 133/174 (76%), Positives = 153/174 (87%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           M+G SYQRFPK+KIRE+KD+Y KFELR+TD SMANALRR+MIAEVPTIAI+LVEIEVNS+
Sbjct: 1   MDGASYQRFPKVKIRELKDDYAKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEFHL  +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D +V+PVD  + A   S D  + +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHSVVPVDFVDPAGYDSTD--QQRGIIIVKLRRGQELRLRAIARKG 172


>gb|AAM65319.1| DNA-directed RNA polymerase II, third largest subunit [Arabidopsis
           thaliana]
          Length = 319

 Score =  269 bits (688), Expect = 1e-69
 Identities = 135/174 (77%), Positives = 154/174 (88%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           M+G +YQRFPKIKIRE+KD+Y KFELRETDVSMANALRR+MI+EVPT+AI+LVEIEVNS+
Sbjct: 1   MDGATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLI LTS++AM MRFSRDCDACDGDGQCE+CSVEF LS +C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLISLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL +ADP V PVD      S+  DS+E+KGIIIVKLRRGQEL+LRAIARKG
Sbjct: 121 TSRDLYSADPTVTPVDF--TIDSSVSDSSEHKGIIIVKLRRGQELKLRAIARKG 172


>ref|XP_006393120.1| hypothetical protein EUTSA_v10011661mg [Eutrema salsugineum]
           gi|557089698|gb|ESQ30406.1| hypothetical protein
           EUTSA_v10011661mg [Eutrema salsugineum]
          Length = 320

 Score =  268 bits (685), Expect = 3e-69
 Identities = 132/172 (76%), Positives = 151/172 (87%)
 Frame = -2

Query: 518 GMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNSTVL 339
           G SYQRFPK+KIRE+KD+Y KFELRETDVSMANALRR+MI+EVPT+AI+LVEI +NS+VL
Sbjct: 4   GASYQRFPKVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIMINSSVL 63

Query: 338 NDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDVTS 159
           NDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCE+CSVEF L  +C  DQTLDVTS
Sbjct: 64  NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFQLGAKCVTDQTLDVTS 123

Query: 158 ADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
            DL +ADP V PVD A    +T  DS+E +GIIIVKLRRGQEL+LRAIARKG
Sbjct: 124 RDLYSADPTVTPVDFATDPSAT--DSSEQRGIIIVKLRRGQELKLRAIARKG 173


>ref|XP_004505300.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Cicer arietinum]
          Length = 319

 Score =  268 bits (685), Expect = 3e-69
 Identities = 131/174 (75%), Positives = 155/174 (89%)
 Frame = -2

Query: 524 MEGMSYQRFPKIKIREMKDEYLKFELRETDVSMANALRRIMIAEVPTIAIELVEIEVNST 345
           MEG SY R P++KIRE+KD+Y+KFELR+TD S+ANALRR+MI+EVPTIAI+LVEIEVNS+
Sbjct: 1   MEGASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSS 60

Query: 344 VLNDEFLAHRLGLIPLTSDKAMGMRFSRDCDACDGDGQCEYCSVEFHLSVRCDQDQTLDV 165
           VLNDEF+AHRLGLIPLTS++AM MRFSRDCDACDGDGQCEYCSVEFHL V+C  DQTLDV
Sbjct: 61  VLNDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDV 120

Query: 164 TSADLLTADPNVIPVDVANAARSTSFDSAENKGIIIVKLRRGQELRLRAIARKG 3
           TS DL ++D  V+PVD   +A  +S +S++ +GIIIVKLRRGQELRLRAIARKG
Sbjct: 121 TSKDLYSSDHTVVPVDF--SADPSSLESSDGRGIIIVKLRRGQELRLRAIARKG 172