BLASTX nr result

ID: Papaver27_contig00024919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00024919
         (472 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like ...    55   8e-06
ref|XP_002304634.2| hypothetical protein POPTR_0003s15960g, part...    55   1e-05

>ref|XP_004140655.1| PREDICTED: 40S ribosomal protein S27-2-like [Cucumis sativus]
           gi|449487447|ref|XP_004157631.1| PREDICTED: 40S
           ribosomal protein S27-2-like [Cucumis sativus]
          Length = 161

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +1

Query: 364 SVKLIEKVLSNDIDLMNPSAELEKRSHKIKRLVQSP 471
           SV    +VL NDIDL+NP AELEKR HK+KRLVQSP
Sbjct: 70  SVSSFNQVLQNDIDLLNPPAELEKRKHKLKRLVQSP 105


>ref|XP_002304634.2| hypothetical protein POPTR_0003s15960g, partial [Populus
           trichocarpa] gi|550343279|gb|EEE79613.2| hypothetical
           protein POPTR_0003s15960g, partial [Populus trichocarpa]
          Length = 125

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = +1

Query: 367 VKLIEKVLSNDIDLMNPSAELEKRSHKIKRLVQSP 471
           V  I+ VL NDIDL+NP AELEKR HK+KRLVQSP
Sbjct: 35  VSRIKMVLQNDIDLLNPPAELEKRKHKLKRLVQSP 69


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