BLASTX nr result
ID: Papaver27_contig00024447
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00024447
(2282 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A... 201 1e-74
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 201 4e-74
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 190 1e-72
ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein A... 190 2e-70
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 201 1e-68
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 194 2e-68
gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlise... 200 3e-68
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun... 206 4e-68
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 197 8e-68
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 179 1e-67
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 197 5e-67
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 189 4e-65
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 192 5e-65
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 200 7e-65
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 194 9e-65
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 201 1e-64
ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein A... 193 2e-64
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 204 6e-64
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 189 8e-64
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 191 2e-63
>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 765
Score = 201 bits (510), Expect(3) = 1e-74
Identities = 106/279 (37%), Positives = 159/279 (56%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NG+P G KP RGLRQG PLSPYLF+ C + + + A I+G K + +
Sbjct: 24 SVLINGNPVGLIKPERGLRQGCPLSPYLFILCAEAFSNLLNQAEREQKIRGLKFAQDI-T 82
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+THLLFADD LVF +AS L IF + KASGQ+ N KS +FFS + +++I
Sbjct: 83 ITHLLFADDSLVFSKASVADCKYLKGIFDCYAKASGQIFNFEKSSMFFSGKASSEQISAI 142
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+S +K +P +KYLG P R+K+ F+ + V +++ + + GK ++IK+
Sbjct: 143 KSIFQLKVVPKYEKYLGLPPMLGRNKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKA 202
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MS FKLP FWWG ++ G + WDS K+ GGLG
Sbjct: 203 VAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWGTK-KDKHGIHWARWDSMSKAKRRGGLG 261
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNT 837
+++ N+A++AK GWRL + P+SL ++KA YY N+
Sbjct: 262 FRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNS 300
Score = 100 bits (248), Expect(3) = 1e-74
Identities = 92/404 (22%), Positives = 163/404 (40%), Gaps = 13/404 (3%)
Frame = +2
Query: 1046 SDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLY--- 1216
+DLI + W + +L F + I +I +P+ ED+ +W K +SVKS Y
Sbjct: 368 ADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLA 427
Query: 1217 ------NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTC 1378
N+ S+ S+ W W L + +K+FMW+ +ILP + + + C
Sbjct: 428 LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPIC 487
Query: 1379 LRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINS-WFRDKTRDSNFI 1555
RC ET++H+ ++C A ++W+ + K+ I W R T ++ +
Sbjct: 488 QRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELM 547
Query: 1556 EWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNSSSHIKNDSYNINQTMYYN 1735
+C W IW AR +F+ K +S ++L + K DS
Sbjct: 548 --IVYC----WVIWSARNKFIFEGKKSDS--------RFLAA----KADSVLKAYQRVSK 589
Query: 1736 PLNDPDLKITPIN--GWHLPEHFRYRINIAISMLPELCDSAIGLTLIDDTGKCKEARGNS 1909
P N K I+ W P ++N+ ++ + +G + D GK
Sbjct: 590 PGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKILAVGIKQ 649
Query: 1910 SGWNSR-DLLEQEGAEAAFQWAMELSGHHIEFQSDSEPILKRLIEMYAKAREERFNNSNQ 2086
+ + R L E E Q A ++S + +SD + +++ L E + S+
Sbjct: 650 AQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDV 709
Query: 2087 FESQKFKLFNFKALSFNVVTRPNNFLAASISKMCNRSIINSRWV 2218
K +FK + F+ + R N A +++K R+ WV
Sbjct: 710 RRESK----DFKQVQFSFIPRTCNTYAHALAKFALRNSSTDVWV 749
Score = 30.0 bits (66), Expect(3) = 1e-74
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 903 WDWHIMQPNCFWSLGKGNKIRIWTDYWIP 989
W +++ W +G G K+ ++ D WIP
Sbjct: 320 WGSQVIKKGVRWRIGDGKKVLVYKDKWIP 348
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 201 bits (510), Expect(3) = 4e-74
Identities = 106/279 (37%), Positives = 159/279 (56%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NG+P G KP RGLRQG PLSPYLF+ C + + + A I+G K + +
Sbjct: 711 SVLINGNPVGLIKPERGLRQGCPLSPYLFILCAEAFSNLLNQAEREQKIRGLKFAQDI-T 769
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+THLLFADD LVF +AS L IF + KASGQ+ N KS +FFS + +++I
Sbjct: 770 ITHLLFADDSLVFSKASVADCKYLKGIFDCYAKASGQIFNFEKSSMFFSGKASSEQISAI 829
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+S +K +P +KYLG P R+K+ F+ + V +++ + + GK ++IK+
Sbjct: 830 KSIFQLKVVPKYEKYLGLPPMLGRNKMSFFKEVKLKVTSKISSWHHKLFSAGGKEILIKA 889
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MS FKLP FWWG ++ G + WDS K+ GGLG
Sbjct: 890 VAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWGTK-KDKHGIHWARWDSMSKAKRRGGLG 948
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNT 837
+++ N+A++AK GWRL + P+SL ++KA YY N+
Sbjct: 949 FRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNS 987
Score = 98.6 bits (244), Expect(3) = 4e-74
Identities = 92/404 (22%), Positives = 162/404 (40%), Gaps = 13/404 (3%)
Frame = +2
Query: 1046 SDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLY--- 1216
+DLI + W + +L F + I +I +P+ ED+ +W K +SVKS Y
Sbjct: 1055 ADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLA 1114
Query: 1217 ------NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTC 1378
N+ S+ S+ W W L + +K+FMW+ +ILP + + + C
Sbjct: 1115 LNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMWRALKNILPTAENLWKRRSLQEPIC 1174
Query: 1379 LRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINS-WFRDKTRDSNFI 1555
RC ET++H+ ++C A ++W+ + K+ I W R T ++ +
Sbjct: 1175 QRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKDHNQDFFSAIQEMWSRSSTAEAELM 1234
Query: 1556 EWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNSSSHIKNDSYNINQTMYYN 1735
+C W IW AR +F+ K +S ++L + K DS
Sbjct: 1235 --IVYC----WVIWSARNKFIFEGKKSDS--------RFLAA----KADSVLKAYQRVSK 1276
Query: 1736 PLNDPDLKITPIN--GWHLPEHFRYRINIAISMLPELCDSAIGLTLIDDTGKCKEARGNS 1909
P N K I+ W P ++N+ ++ + +G + D GK
Sbjct: 1277 PGNVHGAKDRGIDQQKWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKILAVGIKQ 1336
Query: 1910 SGWNSR-DLLEQEGAEAAFQWAMELSGHHIEFQSDSEPILKRLIEMYAKAREERFNNSNQ 2086
+ + R L E E Q A ++S + +SD + +++ L E + S+
Sbjct: 1337 AQFRERVSLAEAEAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHWILSDV 1396
Query: 2087 FESQKFKLFNFKALSFNVVTRPNNFLAASISKMCNRSIINSRWV 2218
K FK + F+ + R N A +++K R+ WV
Sbjct: 1397 RRESK----EFKQVQFSFIPRTCNTYAHALAKFALRNSSTDVWV 1436
Score = 30.0 bits (66), Expect(3) = 4e-74
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +3
Query: 903 WDWHIMQPNCFWSLGKGNKIRIWTDYWIP 989
W +++ W +G G K+ ++ D WIP
Sbjct: 1007 WGSQVIKKGVRWRIGDGKKVLVYKDKWIP 1035
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 190 bits (482), Expect(3) = 1e-72
Identities = 102/282 (36%), Positives = 153/282 (54%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++++NG+P GFF P RGLRQG PLSPYLF+ C + +L A + I G + ++ +
Sbjct: 594 SVIINGTPKGFFHPERGLRQGCPLSPYLFIICTEVFSSLLLQAETKKRISGLRFAEDV-T 652
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++HLLFADD LVF AS +L IF + KASGQ+ N KS +FF E +I
Sbjct: 653 ISHLLFADDSLVFSTASVAECKHLKGIFDRYAKASGQIFNFEKSSMFFGGKIPEEQKAAI 712
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
++ N+ + +KYLG P R K F + V +++ Q + + GK ++IK+
Sbjct: 713 RNIFNLNVVSKYEKYLGLPSMIGRKKTSFFREVKLRVLSKINNWQHKMFSSGGKEILIKA 772
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MS FKLP FWWG ++ +G + WD + GGLG
Sbjct: 773 VAQAVPAYAMSVFKLPKGLCEEIQSEIAKFWWGSK-KDKRGIHWARWDKLSCAKSRGGLG 831
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIM 846
++ N+AM+AK GWRL Q P+SL +L+A Y+ + +
Sbjct: 832 FRDFISFNQAMVAKQGWRLIQFPNSLVSKVLRARYFKSCSFL 873
Score = 103 bits (256), Expect(3) = 1e-72
Identities = 98/424 (23%), Positives = 178/424 (41%), Gaps = 17/424 (4%)
Frame = +2
Query: 1001 PLTKPN--IDTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIW 1174
P++ P IDTT +L+ + W++ KLN F I +I +P + D+ +W
Sbjct: 925 PISPPTLPIDTT----VGELMDDENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVDEMMW 980
Query: 1175 SLTKDNNFSVKSLYN---KLNISD-PSTAD-----WGKIWNLKVSPSIKLFMWKIANSIL 1327
K +SVKS Y KL D PS + W +W++++ +K+FMW+ A ++L
Sbjct: 981 HYDKHGEYSVKSGYQIALKLKAPDEPSNSGSNSKRWKAVWSMELPEKMKIFMWRAARNLL 1040
Query: 1328 PNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHL--NFQMDYVKNG--AT 1495
P + + + + C CN ET+ H LDC A ++W H + Q+ +N
Sbjct: 1041 PTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQDILE 1100
Query: 1496 TCHDWINSWFRDKTRDSNFIEWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYL 1675
++ ++W + K + FC W IW AR ++F+ K + +A L
Sbjct: 1101 FIYEVWSTWGKTKAEQT-----IAFC----WAIWFARNKRIFEGKKSDPRASAAKAESLL 1151
Query: 1676 NSSSHI-KNDSYNINQTMYYNPLNDPDLKITPINGWHLPEHFRYRINIAISMLPELCDSA 1852
+ K D+ +I+ ++K W P ++N+ ++ +
Sbjct: 1152 EAYHRARKPDASHIH-----------NVKRIVQKKWEPPPGNFLKVNVDAAINNRDQVAG 1200
Query: 1853 IGLTLIDDTGKCKEARGNSSGWNSR-DLLEQEGAEAAFQWAMELSGHHIEFQSDSEPILK 2029
+G + D +GK A E E E Q A ELS + ++D K
Sbjct: 1201 LGAVIKDPSGKIVAAGTKQVPLREGVSFAEAEAMEWGLQIARELSLSALIMETD----CK 1256
Query: 2030 RLIEMYAKAREERFNNSNQFESQKFKLFNFKALSFNVVTRPNNFLAASISKMCNRSIINS 2209
++++ + R S + + +FK + F + R N A S++K+ + ++
Sbjct: 1257 EVVDLLNNTKGSRTGISWVISDIQEQRRDFKEVKFRHIPRTCNTCAHSLAKLAVGANTSA 1316
Query: 2210 RWVD 2221
W+D
Sbjct: 1317 VWLD 1320
Score = 31.2 bits (69), Expect(3) = 1e-72
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 903 WDWHIMQPNCFWSLGKGNKIRIWTDYWIP 989
W ++Q W +G G+ I ++ D WIP
Sbjct: 890 WGRQVIQKGARWRIGNGSNILVYKDNWIP 918
>ref|XP_006493121.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform X1
[Citrus sinensis]
Length = 968
Score = 190 bits (482), Expect(3) = 2e-70
Identities = 101/286 (35%), Positives = 153/286 (53%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NG G +P RGLRQG PLSPYLF+ C T + A S LI G K N S
Sbjct: 231 SVLINGVAKGLIQPQRGLRQGCPLSPYLFIICAEVFTNLLHQAESNQLIHGLKFSGNL-S 289
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+THLLFADD LVF A+ + NL ++F + ASGQ+ N KS +FFS + + + +I
Sbjct: 290 ITHLLFADDSLVFTRATKEDCTNLKQLFDCYAAASGQIFNFEKSSMFFSENAKQGQITTI 349
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ ++ + +KYLG P R K F I + ++ Q + GK ++IK+
Sbjct: 350 KDIFQLQVVSRHEKYLGLPSMVGRKKTSFFNEIKLRIINKISNWQANFFSSGGKEILIKA 409
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MS FKLP FWWGK E + + W+ C++ + GGLG
Sbjct: 410 VAQAVPAYAMSVFKLPLGLCEDMQKAIAGFWWGKKREK-RSIHWSKWERLCQAKKRGGLG 468
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
+++ N+A++AK WR+ Q P+SL ++K Y+ ++ M +
Sbjct: 469 FRDLSSFNQALVAKQSWRIIQAPESLVARVMKEKYFRHSCFMEAQI 514
Score = 101 bits (252), Expect(3) = 2e-70
Identities = 90/361 (24%), Positives = 146/361 (40%), Gaps = 20/361 (5%)
Frame = +2
Query: 1001 PLTKPNI--DTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIW 1174
P++ P++ DTT S LI D+ W + F I +I +P S D+ +W
Sbjct: 562 PISPPSLPLDTT----VSVLIDEDQCWRDDVIRQHFHQEDAAQILKIPLPRQLSPDQVLW 617
Query: 1175 SLTKDNNFSVKSLY---------NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSIL 1327
K N+SVKS Y N+ + S W IW L++ +K+FMW+ N +L
Sbjct: 618 HYDKKGNYSVKSGYQLALQMKFPNRPSSSKEDNNSWNSIWYLQIPEKVKIFMWRATNDLL 677
Query: 1328 PNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHD 1507
P S + + C RC +H ET+ H DC + ++W F+ + VK A C D
Sbjct: 678 PTSENLWKRRILQTPWCQRCRSHRETIFHSLFDCKASRKIWKLTTFE-EEVK--ALKCKD 734
Query: 1508 WINSWF-----RDKTRDSNFIEWAYFCSTINWHIWKARCDKVFKNKDQN---SWQTANTI 1663
++ R KT + + W IW +R +F+NK ++ S A I
Sbjct: 735 VLSLLLALADRRSKTEMELIV-------AVCWSIWHSRNLFIFQNKKEDFQLSVAGAEAI 787
Query: 1664 IKYLNSSSHIKNDSYNINQTMYYNPLNDPDLKITPINGWHLPEHFRYRINIAISMLPELC 1843
++ SY Q +D DL W P +++N+ ++ E
Sbjct: 788 VQ-----------SYKRIQMPQLQAFSDQDL--VSHKHWKCPPAGWFKVNVDAAIKLENQ 834
Query: 1844 DSAIGLTLIDDTGKCKEARGNSSGWNSR-DLLEQEGAEAAFQWAMELSGHHIEFQSDSEP 2020
+G+ + + GK A S W R D E E + A + ++DS+
Sbjct: 835 RVGLGIVIRNSEGKFITAAIKPSKWIDRVDYAEAEATRFGLEVAESAGCLPLIVETDSKE 894
Query: 2021 I 2023
+
Sbjct: 895 V 895
Score = 25.4 bits (54), Expect(3) = 2e-70
Identities = 6/29 (20%), Positives = 15/29 (51%)
Frame = +3
Query: 903 WDWHIMQPNCFWSLGKGNKIRIWTDYWIP 989
W +++ W +G G ++++ W+P
Sbjct: 527 WGREVIRKGLRWRIGDGKLVKVYQSGWLP 555
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 201 bits (512), Expect(3) = 1e-68
Identities = 109/278 (39%), Positives = 162/278 (58%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+I++NG P F P RGLRQG PLSPYLFL L+ + A + G K+ P+
Sbjct: 55 SIVLNGCPGKSFFPGRGLRQGDPLSPYLFLIISEVLSVRLTRAVQDKSLLGIKLCRRGPT 114
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++H+ FADD L F +A+ L++IF ++ KASGQLIN KS +FS +T + +
Sbjct: 115 LSHMFFADDALFFLKATLGNVCRLMEIFKEYCKASGQLINGEKSSAYFSPNTPDQMSRLL 174
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
M + KYLG P RSK + IV+ V+ +L+G ++R+L+ AGK ++IKS
Sbjct: 175 GELMGFAEVEDPGKYLGLPTLWGRSKKEAVGYIVDRVQRKLVGWKQRSLSWAGKEILIKS 234
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V +++ Y M+CFK P +FWWG + + K+W+ K+ E GGLG
Sbjct: 235 VATAIPAYPMACFKFPKGVCDTINSALSNFWWGSTSTGNR-IHWKSWELLGKTKEEGGLG 293
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPN 834
+++ Q N ++LAK WRL ++P+SLW S+LKA Y+PN
Sbjct: 294 FRDLHQFNMSLLAKQCWRLVEEPNSLWASVLKARYFPN 331
Score = 78.6 bits (192), Expect(3) = 1e-68
Identities = 51/201 (25%), Positives = 85/201 (42%), Gaps = 17/201 (8%)
Frame = +2
Query: 1073 WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLYNKLNISDPSTAD 1252
W + + + + I+ I I + D+ +W +K+ +F+VKS Y+ L+ A
Sbjct: 413 WRLDGVANVLSREAEDRIRCIPIGEEDGNDRLLWPWSKNGSFTVKSGYHWLHQQSSMNAS 472
Query: 1253 ---------------WGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTCLRC 1387
W +W + P +KLF W++ + PN + + + C C
Sbjct: 473 PLVITGTSHRVGKKMWRLLWGMPTLPKVKLFFWQVMGGVGPNFSNLYKRKLTSSPMCPLC 532
Query: 1388 NNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDW-INSWFR-DKTRDSNFIEW 1561
+ET HL L C++ S +W + K T W INS+ T+ F +
Sbjct: 533 GLEDETFEHLLLLCSWVSPIWFGSPMGLRIDKQQITMVDSWFINSYSSIVGTKQKEF--F 590
Query: 1562 AYFCSTINWHIWKARCDKVFK 1624
S I W IWKARC+ ++K
Sbjct: 591 LTMSSMICWMIWKARCNYLYK 611
Score = 30.8 bits (68), Expect(3) = 1e-68
Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 7/36 (19%)
Frame = +3
Query: 903 WDW-------HIMQPNCFWSLGKGNKIRIWTDYWIP 989
W W ++ C W + G I+IW D WIP
Sbjct: 345 WSWASLIEARDLVFQGCCWQVVNGKSIQIWHDSWIP 380
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 194 bits (492), Expect(3) = 2e-68
Identities = 100/287 (34%), Positives = 164/287 (57%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NG P F P+RGLRQG PLSP+LF+ C L+ + A +I G KI
Sbjct: 625 SVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSP 684
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++HL FADD L+F A+ + N++ I S + ASGQ +N+ KS + +S + + +N++
Sbjct: 685 ISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRNLEPDKINTL 744
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
Q + KT+ +KYLG P F SK + F+ I + V +L G + + L+ AG+ V+IK+
Sbjct: 745 QMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKA 804
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y M CF +P R+F+WG+ E + ++ AW+ + GGLG
Sbjct: 805 VAQAIPTYAMQCFVIPKSIIDGIEKMCRNFFWGQKEEERRVAWV-AWEKLFLPKKEGGLG 863
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNLT 861
++N + N+A+LAK WR+ PDSL ++K Y+P ++ + ++
Sbjct: 864 IRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVS 910
Score = 91.7 bits (226), Expect(3) = 2e-68
Identities = 60/204 (29%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Frame = +2
Query: 1049 DLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLYNKLN 1228
+LI++D+ W++ LN+ F I++I + D+ +W ++K+ F+V+S Y
Sbjct: 974 ELISNDR-WNVELLNTLFQPWESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYYHEL 1032
Query: 1229 ISD----PSTAD------WGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTC 1378
+ D PST+ W KIW K+ P +KLF WK ++ L + + NI+ C
Sbjct: 1033 LEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGAC 1092
Query: 1379 LRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINSWFRDKTRDSNFIE 1558
RC ET HL C+ +S+ W ++ A + W+ S D +D+ +
Sbjct: 1093 PRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVES-LLDTHKDTEW-- 1149
Query: 1559 WAYFCSTINWHIWKARCDKVFKNK 1630
WA F I W+IW R VF+ K
Sbjct: 1150 WALFW-MICWNIWLGRNKWVFEKK 1172
Score = 25.0 bits (53), Expect(3) = 2e-68
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWIPNLNSH 1004
+G G IW D W+P+L +
Sbjct: 935 IGDGRDTTIWGDPWVPSLERY 955
>gb|EPS72636.1| hypothetical protein M569_02121, partial [Genlisea aurea]
Length = 1503
Score = 200 bits (509), Expect(3) = 3e-68
Identities = 104/281 (37%), Positives = 152/281 (54%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++++NG G P RGLRQG PLSPYLFLFC L+ + A I G ++ PS
Sbjct: 955 SLVINGDRVGLINPQRGLRQGDPLSPYLFLFCAEGLSSALRAAEQSQSITGFRVTRRGPS 1014
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++HL FADD ++FCEAS A + + I D+ +ASGQ +N +KS + FS +T ++
Sbjct: 1015 ISHLFFADDAMIFCEASCAALSRVSDILQDYERASGQKVNTHKSAMVFSPNTPDSEKEIW 1074
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ D YLG P T SK + F ++E V ++ G + L+ AGK V+IK+
Sbjct: 1075 SRGLGFLVKSHHDIYLGLPSLTGSSKKRLFSGLLERVNRKIEGWNSKFLSQAGKLVLIKA 1134
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MSCF LP +WW N KG + K+WD +S + GGLG
Sbjct: 1135 VLQAIPAYTMSCFALPKSFLGDLQSAISRYWWRN--RNGKGIHWKSWDFISRSFKEGGLG 1192
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDI 843
+++ N A+L K WR+ P S+ + +A Y+PN DI
Sbjct: 1193 FRDLHDFNLALLGKQVWRIASAPHSILSRVFRAKYFPNGDI 1233
Score = 84.0 bits (206), Expect(3) = 3e-68
Identities = 63/230 (27%), Positives = 104/230 (45%), Gaps = 23/230 (10%)
Frame = +2
Query: 1013 PNIDTTNL-------NYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAI 1171
P TNL + A+ + + K WD+ ++ FD N I I + + SEDK +
Sbjct: 1282 PTFKPTNLLGERRRASVATLIDSRTKWWDVGRIREKFDPVDANHIISIPLSESPSEDKIL 1341
Query: 1172 WSLTKDNNFSVKSLYN-----KLNISDPSTAD------WGKIWNLKVSPSIKLFMWKIAN 1318
W +K ++V+S Y+ ++ +S S+ W IW P I LFMW++A+
Sbjct: 1342 WHYSKSGTYTVRSAYHLVRSLRVEVSSSSSDSRVTPKVWDLIWKHACCPKIGLFMWRLAH 1401
Query: 1319 SILPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYV---KNG 1489
LP + + + I+ C C N E+ H+ L+C A QVW + + ++G
Sbjct: 1402 GCLPTNETLWRRRIPIDKECSICLNRTESDRHILLECPPAIQVWALSDLPWGAINTWRDG 1461
Query: 1490 ATTCHDWINSWFRDKTRDSNFIEWAYF--CSTINWHIWKARCDKVFKNKD 1633
A+ DWI+S S ++ A F TI W +W R ++ + D
Sbjct: 1462 ASAI-DWISS-------VSATLKPAAFSRLMTIAWFLWWKRNSRIHEGAD 1503
Score = 25.0 bits (53), Expect(3) = 3e-68
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWIP 989
+G G+ + IW D WIP
Sbjct: 1264 IGDGSSVDIWHDPWIP 1279
>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
gi|462398983|gb|EMJ04651.1| hypothetical protein
PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 206 bits (524), Expect(3) = 4e-68
Identities = 114/286 (39%), Positives = 158/286 (55%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+ L+NG P PTRGLRQG PLSPYLFL C T + A ++G I AP+
Sbjct: 1034 SFLVNGEPTRILYPTRGLRQGDPLSPYLFLLCAEGFTTLLSKAERQGQLQGIVICRGAPT 1093
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
V+HL FADD VF +A+ L IF + ASGQ IN KS V FSA+ + +T + +
Sbjct: 1094 VSHLFFADDSFVFAKATDNNCGVLKHIFEVYEHASGQQINCQKSCVAFSANIHMDTQSRL 1153
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
S + + + YLG P+ R+K CF + E V +L G +++ L+ AGK V++K
Sbjct: 1154 ASVLGVPRVDSHATYLGLPMMLGRNKTVCFRYLKERVWKKLQGWREQTLSIAGKEVLLKV 1213
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V S+ +Y MSCF LP FWWG+ EN K +++ W+ CK+ GG+G
Sbjct: 1214 VAQSIPLYVMSCFLLPQGLCHEIEQMMARFWWGQQGENRKIHWMR-WERLCKAKTEGGMG 1272
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
+ ++ N AMLAK GWRL +P SL +LKA Y+P T+ L
Sbjct: 1273 FRCLQAFNMAMLAKQGWRLVHNPHSLASRLLKAKYFPQTNFWEATL 1318
Score = 74.7 bits (182), Expect(3) = 4e-68
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Frame = +2
Query: 1004 LTKPNIDTTNLNYASDLITHD--KLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWS 1177
+T P +D S+LI ++ WD+ KLN+ F V I +I + D+ +W+
Sbjct: 1367 ITSP-LDGMENTKVSELICNEGSPQWDLQKLNNLFLPVDVVDIVRIPLSIRAPPDRIVWN 1425
Query: 1178 LTKDNNFSVKSLYNKL--------NISDPSTAD----WGKIWNLKVSPSIKLFMWKIANS 1321
K F+VKS Y + S S +D W IWN V +K+F W++A+
Sbjct: 1426 YDKHGLFTVKSAYRVALRVTSGDEDESSSSNSDTGMLWRHIWNATVPTKLKIFAWRVAHD 1485
Query: 1322 ILPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWN 1453
ILP + K ++ C+ C + E+ H+ C FA WN
Sbjct: 1486 ILPTKANLIKKGVDMQDMCMFCGDITESALHVLAMCPFAVATWN 1529
Score = 28.1 bits (61), Expect(3) = 4e-68
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = +3
Query: 915 IMQPNCFWSLGKGNKIRIWTDYWIP 989
+++ + +G G +RIW D W+P
Sbjct: 1335 VLEMGSRFQIGDGKSVRIWGDKWVP 1359
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 197 bits (501), Expect(2) = 8e-68
Identities = 108/287 (37%), Positives = 150/287 (52%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+ ++NG+P GF P+RGLRQG PLSPYLFL C LT I +KG I AP+
Sbjct: 261 SFVINGTPHGFLHPSRGLRQGDPLSPYLFLLCAEGLTALIAQKEREGFLKGVSICRGAPA 320
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++HL FADD +F A+ L I + +A GQ +N KS V FS + + +
Sbjct: 321 ISHLFFADDSFLFAWANMADCMALKDILDTYERALGQQVNFQKSAVCFSKNVHRGDQLML 380
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
M I + +YLG P+ + K F + E + +L + + L+ AGK ++IK
Sbjct: 381 AQFMGIPCVDHHSQYLGLPMVLDKKKGASFNHLKERLWKKLQTWKGKLLSGAGKEILIKV 440
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ IY MSCF LP FWW + EN K + AWD C E GGLG
Sbjct: 441 VAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKK-IHWMAWDRLCAPKEEGGLG 499
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNLT 861
+N+ N A+LAK GWRL Q+PDSL +LKA Y+P + ++
Sbjct: 500 FRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVS 546
Score = 89.7 bits (221), Expect(2) = 8e-68
Identities = 86/373 (23%), Positives = 145/373 (38%), Gaps = 18/373 (4%)
Frame = +2
Query: 971 DRLLDTKS*LPLTKPNIDTTNLNYASDLITHD-KLWDIVKLNSCFDNHTVNLIKQIKIPT 1147
DR L + + P + + + SDLI D + W+ L + F V LI+ I +
Sbjct: 582 DRWLPQPNSFQIFSPRPEHSAITKVSDLIHGDSREWNAPLLQNVFFPEEVMLIRSIPLSL 641
Query: 1148 NNSEDKAIWSLTKDNNFSVKSLYN------------KLNISDPSTADWGKIWNLKVSPSI 1291
+ D +W K F+VKS Y+ + SD +W +W V +
Sbjct: 642 RLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGRASSSNSDAVARNWSLLWKAIVPARV 701
Query: 1292 KLFMWKIANSILPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQM 1471
K F W++ + ILP +A K +++ C+ C ++L H+ DC WN
Sbjct: 702 KTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVKSLIHILRDC-----PWN------ 750
Query: 1472 DYVKNGATTCHDWINSWFRDKTRDSNFIEWAYFCSTINWHIWKARCDKVFKNK----DQN 1639
NGA + DW+ + ++A F + W IW+AR ++ NK +Q
Sbjct: 751 ----NGAHSPKDWVCRCAEQLSSQ----DFATFL-MVGWAIWEARNGLLWNNKKSRHEQV 801
Query: 1640 SWQTANTIIKYLNSSSHIKNDSYNINQTMYYNPLNDPDLKITPINGWHLPEHFRYRINIA 1819
S + + +L S+ + + S + P ++ LKI W
Sbjct: 802 SLHASLRLHDFLRVSNCLGSQSRQGQIKQMWQPPHENSLKINVDGAWK------------ 849
Query: 1820 ISMLPELCDSAIGLTLIDDTGKCKEARGNS-SGWNSRDLLEQEGAEAAFQWAMELSGHHI 1996
P + +G+ + D TGK + S +E A AME ++
Sbjct: 850 ----PGTTEGGVGVVVRDSTGKFVAGCATKLTNVFSAPQVEALAARTNTILAMERGYQNV 905
Query: 1997 EFQSDSEPILKRL 2035
F+SD+ I+ L
Sbjct: 906 VFESDALQIVTAL 918
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 179 bits (453), Expect(3) = 1e-67
Identities = 96/281 (34%), Positives = 158/281 (56%)
Frame = +1
Query: 4 ILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPSV 183
+++NG G F P+RG+RQG P+SPYLFLF L+ I +A +L++G K+ P++
Sbjct: 11 VVINGQQGGAFSPSRGIRQGDPISPYLFLFISEVLSLLIKNACETDLLQGIKLNSGGPTL 70
Query: 184 THLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSIQ 363
+HLLFADD L+F +A+TQ N+ ++ + ASGQ ++L KS V FS++T S+
Sbjct: 71 SHLLFADDTLIFLKATTQNCQNISRLLQAYCAASGQQVSLTKSNVVFSSNTPSYVRASMC 130
Query: 364 SNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKSV 543
+ + + + KYLG P R+K + + + + ++ G + L+ AG+ ++IKSV
Sbjct: 131 AILGMPDVTDAGKYLGLPTSWGRAKKEELVYVKDRILRKVHGWNQHCLSQAGREILIKSV 190
Query: 544 TSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLGL 723
++ Y M+ FK P FW G+ +N K ++ WD+ + GG+
Sbjct: 191 ALAVPAYPMNIFKFPTTLCKEIDSVLAGFWCGQIGDNRKLHWIN-WDTLGQPKHEGGMDF 249
Query: 724 QNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIM 846
+N+ + N A+LAK WR+ +P SLW +LK Y+PN +
Sbjct: 250 RNLHKFNLALLAKQCWRILMEPQSLWVKVLKGRYFPNVSFL 290
Score = 97.8 bits (242), Expect(3) = 1e-67
Identities = 78/316 (24%), Positives = 138/316 (43%), Gaps = 38/316 (12%)
Frame = +2
Query: 1022 DTTNLNYASDLITHDKL--WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNN 1195
+T + N + I + +L W++ + + I ++K ++ D+ IW + ++ +
Sbjct: 348 ETLDRNLRVEAIINRELDEWNLDPIRHAISDSDARAITRVKFGSSRLPDRLIWPMERNGS 407
Query: 1196 FSVKSLYNKLNISD-------PSTAD------WGKIWNLKVSPSIKLFMWKIANSILPNS 1336
+SV+S Y+ L+ ++ PS++ W +IW V P I+ F+W+ + L S
Sbjct: 408 YSVRSGYHWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRNFLWRALRNCLATS 467
Query: 1337 MRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWI- 1513
+ K + C CN+H ET H+ L C + VW + + + T+ W+
Sbjct: 468 ANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVWFRCSLNLRINRQAVTSFGQWLG 527
Query: 1514 NSWFRDKT---RDSNFIEWAYFCSTINWHIWKARCDKVFKNKDQNSWQTAN----TIIKY 1672
N + KT R AYFC W IWK +C V ++ + +T + I ++
Sbjct: 528 NVIEKGKTPQERSRCLTVIAYFC----WQIWKDKCKAVLEHISPSPARTTHAASIAINEF 583
Query: 1673 LNSSSHIKNDS-----YNINQTMYYNPLNDPDLKITPINGWHLPEHFRYRINIAI----- 1822
L S H ++ + N NQ +NP P +K+ W+ P R I I I
Sbjct: 584 LGSLDHGRHQTEHPTLSNDNQQQLWNPPTSPFVKVNVDASWN-PNSKRVGIGILIRNTHG 642
Query: 1823 -----SMLPELCDSAI 1855
S +P + +SAI
Sbjct: 643 DFIKGSSIPSVANSAI 658
Score = 30.8 bits (68), Expect(3) = 1e-67
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
Frame = +3
Query: 891 GDKKWDW-------HIMQPNCFWSLGKGNKIRIWTDYWIPN 992
G W W I+ W + G IR+W D W+PN
Sbjct: 296 GRTSWAWASLLEGRDILLRGAHWQVMNGAHIRLWIDRWLPN 336
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 197 bits (501), Expect(3) = 5e-67
Identities = 106/275 (38%), Positives = 152/275 (55%)
Frame = +1
Query: 4 ILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPSV 183
+L+NG P G P RGLRQG PLSPYLF+ C L I A NLI G K+ +P+V
Sbjct: 401 VLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAV 460
Query: 184 THLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSIQ 363
+HLLFADD L FC+A+ + +++I + SGQ IN +KS + F ++ I+
Sbjct: 461 SHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIK 520
Query: 364 SNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKSV 543
+ I + YLG P SK K F + + +++R+ G + L+ GK V+IKSV
Sbjct: 521 LILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSV 580
Query: 544 TSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLGL 723
+++ Y MSCF+LP FWW N ++ +G + AWD C S +GGLG
Sbjct: 581 AATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDS-RGMHWMAWDKLCSSKSDGGLGF 639
Query: 724 QNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYY 828
+N++ N A+LAK WRL PDSL+ + K Y+
Sbjct: 640 RNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYF 674
Score = 83.2 bits (204), Expect(3) = 5e-67
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Frame = +2
Query: 1031 NLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKS 1210
+L S + + W+I L FD V LI + I N ED W TK N++VKS
Sbjct: 742 SLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKS 801
Query: 1211 LYN--KLNISDPSTADW-------GKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPN 1363
Y+ +L++++ +T IW ++ P ++ F+W+I + +P S + +
Sbjct: 802 GYHTARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGIL 861
Query: 1364 INTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQMD---YVKNGATTCHDWINSWFRDK 1534
+ C+ C E++ H C+ A Q+W + N T D + W
Sbjct: 862 CDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGIFPSNSIFTNLDHL-FWRIPS 920
Query: 1535 TRDSNFIEWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNS 1681
DS W I W+IWKAR +KVF+N D++ + +K S
Sbjct: 921 GVDSAPYPW------IIWYIWKARNEKVFENVDKDPMEILLLAVKEAQS 963
Score = 25.0 bits (53), Expect(3) = 5e-67
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWIP 989
+G G I +W D WIP
Sbjct: 710 VGSGASISVWNDPWIP 725
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 189 bits (480), Expect(3) = 4e-65
Identities = 101/282 (35%), Positives = 155/282 (54%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NG P G PTRG+RQG PLSP LF+ C +L + A I G + D S
Sbjct: 615 SVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVS 674
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
V HLLFADD L+ C+A+ Q L++ S +G+ SGQ+INLNKS + F + + + I
Sbjct: 675 VNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWI 734
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+S I KYLG P SK F I E +++RL G + L+ GK V++KS
Sbjct: 735 KSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKS 794
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
+ ++ +Y MSCFKLP DFWW +++ + + +W + GG G
Sbjct: 795 IALALPVYVMSCFKLPKNLCQKLTTVMMDFWW-NSMQQKRKIHWLSWQRLTLPKDQGGFG 853
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIM 846
++++ N+A+LAK WR+ Q+ SL+ + ++ Y+ N+D +
Sbjct: 854 FKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFL 895
Score = 85.5 bits (210), Expect(3) = 4e-65
Identities = 68/285 (23%), Positives = 119/285 (41%), Gaps = 19/285 (6%)
Frame = +2
Query: 1001 PLTKPNIDTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSL 1180
PL + +L + + + W++ L F V +I + + P ED W
Sbjct: 947 PLNRRRFINVDLKVSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQR-PLFFKEDSFCWLH 1005
Query: 1181 TKDNNFSVKS------------LYNKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSI 1324
+ + +SVK+ LY + + + + KIWNL +P I++F+WK +
Sbjct: 1006 SHNGLYSVKTGYEFLSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGA 1065
Query: 1325 LPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVW--NHLNFQMDYVKNGATT 1498
+P R+ + + CL C+ NET+ H+ +C A QVW HL+ N T
Sbjct: 1066 IPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYT 1125
Query: 1499 CHDWINSWFRDKTRDSNFIEWAYFCST-INWHIWKARCDKVFKNKDQNSWQTANTII--- 1666
S D T+ ++ F S I W +WK R +F+ K + +
Sbjct: 1126 ----NMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAY 1181
Query: 1667 -KYLNSSSHIKNDSYNINQTMYYNPLNDPDLKITPINGWHLPEHF 1798
++ ++ +H++ND ++ T + PL +LK W HF
Sbjct: 1182 HEWFSAQTHMQNDEKHLKITKWCPPL-PGELKCNIGFAWSKQHHF 1225
Score = 24.3 bits (51), Expect(3) = 4e-65
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWI 986
+G G K +WTD W+
Sbjct: 925 IGNGQKTFVWTDKWL 939
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 192 bits (489), Expect(3) = 5e-65
Identities = 110/284 (38%), Positives = 146/284 (51%)
Frame = +1
Query: 4 ILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPSV 183
+L+NGSP G P+RG+RQG PLSPYLFLFC L+ + A I G KI + ++
Sbjct: 979 VLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAI 1038
Query: 184 THLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSIQ 363
+HLLFADD L FC AS Q L IF + +ASGQ IN KS + F +
Sbjct: 1039 SHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLH 1098
Query: 364 SNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKSV 543
+ I + KYLG P R K++ FE IV VK R G L+PAGK ++IK++
Sbjct: 1099 RLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAI 1158
Query: 544 TSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLGL 723
++ +Y M+CF LP FWWGK E G LG
Sbjct: 1159 AMALPVYSMNCFLLPTLICNEINSLITAFWWGKENE-------------------GDLGF 1199
Query: 724 QNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLN 855
+++ Q N+A+LAK WR+ +P SL + K LYYPNT + N
Sbjct: 1200 KDLHQFNRALLAKQAWRILTNPQSLLARLYKGLYYPNTTYLRAN 1243
Score = 79.7 bits (195), Expect(3) = 5e-65
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Frame = +2
Query: 1073 WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLY--------NKLN 1228
WD V + L K + + + D W+ T++ ++V+S Y +
Sbjct: 1314 WDPVIFEGVLNPEDQQLAKSLYLSNYAARDSYKWAYTRNTQYTVRSGYWVATHVNLTEEE 1373
Query: 1229 ISDPSTADWG---KIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTCLRCNNHN 1399
I +P D +IW LK++P IK F+W+ + L + ++ + + TC RC N +
Sbjct: 1374 IINPLEGDVPLKQEIWRLKITPKIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNAD 1433
Query: 1400 ETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINSWFRDKTRDSNFIEWAYFCST 1579
ET+ H+ C++A VW NF + I + K + I
Sbjct: 1434 ETINHIIFTCSYAQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFW 1493
Query: 1580 INWHIWKARCDKVFKNKDQNSWQTA 1654
I W +WK+R + +F+ D+ W+ A
Sbjct: 1494 IMWRLWKSRNEYLFQQLDRFPWKVA 1518
Score = 26.2 bits (56), Expect(3) = 5e-65
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWIPNL 995
LG G +IW D W+P L
Sbjct: 1270 LGDGQTTKIWEDPWLPTL 1287
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 200 bits (509), Expect(2) = 7e-65
Identities = 111/291 (38%), Positives = 166/291 (57%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NGSP G+ PTRG+RQG PLSPYLF+ C L+ I S ++G +I + AP+
Sbjct: 998 SVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPA 1057
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+THL FADD L FC+A+ + L +F + SGQ IN+ KS + F + +T + +
Sbjct: 1058 ITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRL 1117
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ + I KYLG P R K + FE I++ VK R R L+PAGK +++KS
Sbjct: 1118 KQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKS 1177
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V +M +Y MSCFKLP +FWW K N +G AW S + GGLG
Sbjct: 1178 VALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEK-ASNQRGIPWVAWKRLQYSKKEGGLG 1236
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNLTQKRT 873
+++ + N A+LAK WRL Q P+SL+ ++KA Y+ + I+ + ++++
Sbjct: 1237 FRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQS 1287
Score = 76.6 bits (187), Expect(2) = 7e-65
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 20/245 (8%)
Frame = +2
Query: 968 MDRLLDTKS*LPL-TKPNIDTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIP 1144
+D ++D+ PL T+ +N + WD K++ D I +I +
Sbjct: 1318 LDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLA 1377
Query: 1145 TNNSEDKAIWSLTKDNNFSVKSLYNKLNISDPSTADWG------------KIWNLKVSPS 1288
+ DK IW+ ++V+S Y L DPST +IWNL + P
Sbjct: 1378 KSKKPDKIIWNYNTTGEYTVRSGYWLLT-HDPSTNIPAINPPHGSIDLKTRIWNLPIMPK 1436
Query: 1289 IKLFMWKIANSILPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQ 1468
+K F+W+ + L + R+ + I+ +C RC+ NE++ H C FA+ W +
Sbjct: 1437 LKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSS 1496
Query: 1469 MDYVKNGATTCHDWINSWFRDKTRDSNFIEWAYFCS-------TINWHIWKARCDKVFKN 1627
+ ++N + N + + + NF++ + W IWKAR + VF N
Sbjct: 1497 L--IRNQLMS-----NDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF-N 1548
Query: 1628 KDQNS 1642
K + S
Sbjct: 1549 KFRES 1553
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 194 bits (494), Expect(3) = 9e-65
Identities = 100/285 (35%), Positives = 157/285 (55%)
Frame = +1
Query: 4 ILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPSV 183
+L+NG+P G P+RGLRQG PLSPYLF+ C L + + A N I G K+ AP +
Sbjct: 617 VLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPI 676
Query: 184 THLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSIQ 363
+HLLFADD + +C+ + +A +++I ++ ASGQ +N KS ++F H +E ++
Sbjct: 677 SHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVK 736
Query: 364 SNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKSV 543
+ I+ E YLG P SK+ + + + ++LG Q L+P GK +++K+V
Sbjct: 737 RKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAV 796
Query: 544 TSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLGL 723
++ Y MSCFK+P +FWW KN + +G + KAW + GGLG
Sbjct: 797 AMALPTYTMSCFKIPKTICQQIESVMAEFWW-KNKKEGRGLHWKAWCHLSRPKAVGGLGF 855
Query: 724 QNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
+ IE N A+L K WR+ + DSL + K+ Y+ +D ++ L
Sbjct: 856 KEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPL 900
Score = 77.8 bits (190), Expect(3) = 9e-65
Identities = 87/379 (22%), Positives = 151/379 (39%), Gaps = 34/379 (8%)
Frame = +2
Query: 1073 WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLY-----------N 1219
W++V L F ++T I ++ + D+ W ++ ++SVKS Y N
Sbjct: 981 WNLVSL--LFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNN 1038
Query: 1220 KLNISDPSTAD-WGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTCLRCNNH 1396
+ PS + +IW L V P I F+W+ N+ L + +A + +C+RC +H
Sbjct: 1039 PQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSH 1098
Query: 1397 NETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINSWFR-------------DKT 1537
ET+ HL C FA W A +W S FR +++
Sbjct: 1099 GETVNHLLFKCPFARLTWAISPLP-------APPGGEWAESLFRNMHHVLSVHKSQPEES 1151
Query: 1538 RDSNFIEWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNSSSHIKNDSYNIN 1717
I W I W +WK R D VFK ++ + Q + +++ ++ K
Sbjct: 1152 DHHALIPW------ILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEP----- 1200
Query: 1718 QTMYYNPLNDPDLKITPINGWHLPEHFRYRINIAISMLPELCDSAIGLTLIDDTGKCKEA 1897
Q + D +K W P H + N + +L + +G L + TG+
Sbjct: 1201 QPQVTSSTRDRCVK------WQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWL 1254
Query: 1898 RGNSSGWNSRDLLEQEGAEAAFQWAM----ELSGHHIEFQSDSEPILKRL-----IEMYA 2050
G + + + +LE E A +WA+ + + F+SDS+ ++ + I A
Sbjct: 1255 -GLRALPSQQSVLETE--VEALRWAVLSLSRFNYRRVIFESDSQYLVSLIQNEMDIPSLA 1311
Query: 2051 KAREERFNNSNQFESQKFK 2107
++ N FE KF+
Sbjct: 1312 PRIQDIRNLLRHFEEVKFQ 1330
Score = 25.4 bits (54), Expect(3) = 9e-65
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 942 LGKGNKIRIWTDYWI 986
+G G I +WTD WI
Sbjct: 926 IGNGETINVWTDPWI 940
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 201 bits (510), Expect(2) = 1e-64
Identities = 111/291 (38%), Positives = 166/291 (57%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+NGSP G+ PTRG+RQG PLSPYLF+ C L+ I S ++G +I + AP+
Sbjct: 772 SVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPA 831
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+THL FADD L FC+A+ + L +F + SGQ IN+ KS + F + +T + +
Sbjct: 832 ITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKL 891
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ + I KYLG P R K + FE I++ VK R R L+PAGK +++KS
Sbjct: 892 KQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKS 951
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V +M +Y MSCFKLP +FWW K N +G AW S + GGLG
Sbjct: 952 VALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEK-ASNQRGIPWVAWKRLQYSKKEGGLG 1010
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNLTQKRT 873
+++ + N A+LAK WRL Q P+SL+ ++KA Y+ + I+ + ++++
Sbjct: 1011 FRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQS 1061
Score = 75.9 bits (185), Expect(2) = 1e-64
Identities = 92/438 (21%), Positives = 165/438 (37%), Gaps = 33/438 (7%)
Frame = +2
Query: 968 MDRLLDTKS*LPL-TKPNIDTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIP 1144
+D ++D+ PL T+ +N + WD K++ D I +I +
Sbjct: 1092 LDNIVDSHPPRPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLA 1151
Query: 1145 TNNSEDKAIWSLTKDNNFSVKSLYNKLNISDPSTADWG------------KIWNLKVSPS 1288
+ DK IW+ ++V+S Y L DPST +IWNL + P
Sbjct: 1152 KSKKPDKIIWNYNTTGEYTVRSGYWLLT-HDPSTNIPAINPPHGSIDLKTRIWNLPIMPK 1210
Query: 1289 IKLFMWKIANSILPNSMRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQ 1468
+K F+W+ + L + R+ + I+ C RC+ NE++ H C FA+ W
Sbjct: 1211 LKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAW------ 1264
Query: 1469 MDYVKNGATTCHDWINSWFRDKTRD-SNFIEWAYFCS-------TINWHIWKARCDKVFK 1624
++ + + + +++ F + + NF++ + W IWKAR + VF
Sbjct: 1265 --WLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVF- 1321
Query: 1625 NKDQNSWQTANTIIKYLNSSSHIKNDSYNINQTMYYNPLNDPDLKITPINGWHLPEHFRY 1804
NK + S + T++ S+ +D N Q+ P + I W P
Sbjct: 1322 NKFRES--PSKTVL----SAKAETHDWLNATQSHKKTPSPTRQIAENKIE-WRNPPATYV 1374
Query: 1805 RINIAISMLPELCDSAIGLTLIDDTGK--CKEARGNSSGWNSRDL--------LEQEGAE 1954
+ N D+ + ++ TG + G W S L E +
Sbjct: 1375 KCNF---------DAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALL 1425
Query: 1955 AAFQWAMELSGHHIEFQSDSEPILKRL--IEMYAKAREERFNNSNQFESQKFKLFNFKAL 2128
AA Q + + D + ++ + I ++ +N E F F ++
Sbjct: 1426 AALQQTWIRGYTQVFMEGDCQTLINLINGISFHSSL-------ANHLEDISFWANKFASI 1478
Query: 2129 SFNVVTRPNNFLAASISK 2182
F + R N LA ++K
Sbjct: 1479 QFGFIRRKGNKLAHVLAK 1496
>ref|XP_004305156.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 813
Score = 193 bits (490), Expect(3) = 2e-64
Identities = 107/287 (37%), Positives = 157/287 (54%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+ L+NG G+ PT GLRQ PLSPYLFL + + S L+KG I D+AP
Sbjct: 117 SFLINGQVRGYLTPTWGLRQSDPLSPYLFLLGAEVFSALLNQKASQGLLKGISICDSAPV 176
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
+ HLLFADD L+F A+ ++ + +D+ KASGQL+N KS + FS T + +SI
Sbjct: 177 IHHLLFADDSLLFGVANHAECGHIKAVLADYEKASGQLVNFGKSNIVFSKGTPVSLQSSI 236
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ + + +KYLG P + +SK + F I E + +L G Q + L+ AGK ++I+
Sbjct: 237 AGELGVGVVVKHEKYLGLPTYVGKSKTETFAFIKERLSKKLEGWQGKLLSGAGKGILIRV 296
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MSCF LP FW G E+ K +L +W+ C+ E GG+G
Sbjct: 297 VAQALPSYSMSCFLLPKSFYAALHQKCARFWLGSKQEDRKIHWL-SWEKLCRPKERGGMG 355
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNLT 861
+++ N AMLAK GWR+ Q PDSL + +A Y+P++ T
Sbjct: 356 FRDLYAHNIAMLAKQGWRILQFPDSLVARLFRARYFPSSSFWSATAT 402
Score = 75.5 bits (184), Expect(3) = 2e-64
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 9/239 (3%)
Frame = +2
Query: 1001 PLTKPNIDTTNLNYASDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSL 1180
PL + N T++ S+LI+ D +W+ +N FD LI I I + D+ +W
Sbjct: 448 PLYRVN---THIVLVSELIS-DFVWNRNLVNILFDASDAELILSIPISSRGRADRLVWHH 503
Query: 1181 TKDNNFSVKSLY--------NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSILPNS 1336
F+ KS Y + + S W IW V +K+ WK SILP
Sbjct: 504 DAKGAFTTKSAYWQAAQWLHSSASTSSQVEQIWHHIWRSNVPRKVKINAWKACGSILPTV 563
Query: 1337 MRVAAKIPNINTTCLRCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWIN 1516
++ K I+ C CN+ E + H+ DC + +V + + +C DW+
Sbjct: 564 SQLRTKHVYIDALCYLCNSAVEIVEHVVRDCPYVREVLCCSALEECFEVEPNISCLDWLE 623
Query: 1517 SWFRDKTRD-SNFIEWAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNSSSH 1690
++ + W W +WK R +++KN Q+ Q + +S H
Sbjct: 624 LCHSQIPKELFEKLLWGI------WSVWKERNCRLWKNTQQHVGQIKANVDAAFDSVLH 676
Score = 28.5 bits (62), Expect(3) = 2e-64
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 936 WSLGKGNKIRIWTDYWIP 989
W +G G ++ IW D W+P
Sbjct: 424 WQVGDGTRVCIWEDPWLP 441
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 204 bits (518), Expect(3) = 6e-64
Identities = 112/286 (39%), Positives = 161/286 (56%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
++L+ G+P G KP+RGLRQG P+SPYLFL L+ I A I G I APS
Sbjct: 904 SVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPS 963
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
V+HL +ADD L+FC+A+ L IFS + ASGQ IN +KS + FS + +
Sbjct: 964 VSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICFSPKSPAAIKEAC 1023
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ +++ +P ++YLG P + + K K F+ + + V R+ G + + L+ AGK V+IK+
Sbjct: 1024 SAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKT 1083
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y MS F+LP FWWGK E KG + + W C S ++GGLG
Sbjct: 1084 VAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGK--EGGKGIHWRRWSDLCFSKKDGGLG 1141
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
+++ N+A+L K GWRL PDSL +LKA Y+P D M L
Sbjct: 1142 FRDLSLFNQALLGKQGWRLMMYPDSLVARMLKAKYFPWDDFMEAEL 1187
Score = 58.9 bits (141), Expect(3) = 6e-64
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Frame = +2
Query: 1046 SDLITHDKLWDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLY--- 1216
SDL+ ++ W++ LN F + I I + D +W+ K+ ++VKS Y
Sbjct: 1248 SDLLHNNGGWNMEALNYWFTDDECEAISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLA 1307
Query: 1217 ------NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTC 1378
+NI W +W LK+ P I F+W+ + +P + K + +C
Sbjct: 1308 CEENREEAINIVLAPRNFWKHLWKLKLPPKINHFLWRCSMGFIPCMEVLLWKHIAHSASC 1367
Query: 1379 LRCNNHNETLTHLFLDCNFASQVWNHLNF 1465
RC E+ H C+ V+ F
Sbjct: 1368 FRCQQGRESPVHATWGCSCCVAVFERAGF 1396
Score = 32.3 bits (72), Expect(3) = 6e-64
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +3
Query: 903 WDWHIMQPNCFWSLGKGNKIRIWTDYWIPNLNS 1001
W +++ W +G G ++R++ D W+P L S
Sbjct: 1200 WGRELLRKGVRWRIGDGKEVRVFIDPWVPGLPS 1232
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 189 bits (479), Expect(3) = 8e-64
Identities = 98/286 (34%), Positives = 158/286 (55%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+ ++NGS CG P RGLRQG PLSPYLF+ + ++ I + G K + P
Sbjct: 620 SFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPE 679
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
++HL FADD L+F A+ Q +V I + + ASGQ IN KS V +S + + + +
Sbjct: 680 ISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDEL 739
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ +N++ + +KYLG P + RSK F+ +++ + +L G +++ L+ AGK V++KS
Sbjct: 740 TNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKS 799
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V ++ Y M +K P FWWG + + + + K WDS C GG+G
Sbjct: 800 VIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSS-DTQRKIHWKNWDSMCNLKCFGGMG 858
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
+++ N A+L + WRL ++P SL G ++KA Y+PN D ++ L
Sbjct: 859 FKDLTIFNDALLGRQAWRLTREPQSLLGRVMKAKYFPNCDFLNAPL 904
Score = 77.4 bits (189), Expect(3) = 8e-64
Identities = 90/399 (22%), Positives = 160/399 (40%), Gaps = 14/399 (3%)
Frame = +2
Query: 1031 NLNYASDLITHDKL-WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVK 1207
++ + S+LI D++ W L S + + I + D+ W+ TKD +SVK
Sbjct: 959 SIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFTKDATYSVK 1018
Query: 1208 SLY--NKLNISDPSTADWGKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTCL 1381
+ Y K D W IW+L VSP ++ F+W++ + LP + + + C
Sbjct: 1019 TAYMIGKGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRSLLKHRHLTDDDLCP 1078
Query: 1382 RCNNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGATTCHDWINSWFRDKTRDSNF-IE 1558
ET H DC +W Q ++ + + D + SW ++ D I+
Sbjct: 1079 WGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDASMSMCDLLVSW---RSLDGKLRIK 1135
Query: 1559 WAYFCSTINWHIWKARCDKVFKNKDQNSWQTANTIIKYLNSSSHIKNDSYNINQTMYYNP 1738
AY + W IW R K+F NK T ++++ S +N S+ Y P
Sbjct: 1136 GAY----LAWCIWGERNAKIFNNK-----TTPSSVLMQRVSRLVEENGSH---ARRIYQP 1183
Query: 1739 LNDPDLKITPINGWHLPEHFRYRINIAISMLPELCDSAIGLTLI---DDTGKCKEARGNS 1909
L P +P W P ++N+ S+ D +GL++I D G A
Sbjct: 1184 L-VPRRTGSP-RQWIAPPADSIKLNVDASL---AVDGWVGLSVIARRSDGGVLFAAVRRV 1238
Query: 1910 SGWNSRDLLEQEGAEAAFQWAMELSGHHIEFQSDSEPILKRLIEMYAKAREERFNNSNQF 2089
+ + ++ E + E A + + +SD + ++ RL + N+
Sbjct: 1239 RAYWAPEIAEAKAVELAVKLGRRYGLQRVILESDCQVVINRLSK-----------NAIFL 1287
Query: 2090 ESQKFKLFN-------FKALSFNVVTRPNNFLAASISKM 2185
LFN F ++ ++ V R N++A ++K+
Sbjct: 1288 SDLDLVLFNILASCTYFSSVVWSHVKRDGNYVAHHLAKL 1326
Score = 28.5 bits (62), Expect(3) = 8e-64
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = +3
Query: 915 IMQPNCFWSLGKGNKIRIWTDYWI 986
+++ W +G G++I +W+D W+
Sbjct: 921 LLKEGVIWRVGNGSQINMWSDPWV 944
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 191 bits (486), Expect(3) = 2e-63
Identities = 109/286 (38%), Positives = 155/286 (54%)
Frame = +1
Query: 1 AILMNGSPCGFFKPTRGLRQGGPLSPYLFLFCM*SLTRTILHA*SLNLIKGHKIIDNAPS 180
+ L+NG+P G PTRGLRQG PLSP LF+ C L+ A L + G ++ N P
Sbjct: 511 SFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPR 570
Query: 181 VTHLLFADDCLVFCEASTQASNNLVKIFSDFGKASGQLINLNKSGVFFSAHTNENTMNSI 360
V HLLFADD + F ++ ++ N L +I S +GKASGQ IN +KS V FS+ T + +
Sbjct: 571 VNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQV 630
Query: 361 QSNMNIKTIPLEDKYLGAPLFTHRSKIKCFEPIVEIVKTRLLGIQKRNLNPAGKTVIIKS 540
+ + I+ KYLG P R K F I++ ++ + R L+ AGK V++K+
Sbjct: 631 KRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKA 690
Query: 541 VTSSMSIYQMSCFKLPXXXXXXXXXXQRDFWWGKNIENPKGTYLKAWDSFCKSIENGGLG 720
V +SM +Y MSCFKLP FWW + K +++ AW GGLG
Sbjct: 691 VLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWV-AWSKLTNPKNAGGLG 749
Query: 721 LQNIEQSNKAMLAKMGWRLQQDPDSLWGSILKALYYPNTDIMHLNL 858
++IE+ N ++LAK+GWRL P+SL IL Y ++ M L
Sbjct: 750 FRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKL 795
Score = 76.3 bits (186), Expect(3) = 2e-63
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
Frame = +2
Query: 1046 SDLITHDKL-WDIVKLNSCFDNHTVNLIKQIKIPTNNSEDKAIWSLTKDNNFSVKSLYNK 1222
S LI + L WD K+ N+ NLIKQ+ P++ DK W K ++ +S Y
Sbjct: 857 SALINQNTLQWDWNKIAVILPNYE-NLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYGI 915
Query: 1223 LNISD---PSTA-DW-GKIWNLKVSPSIKLFMWKIANSILPNSMRVAAKIPNINTTCLRC 1387
+++ P T +W +W L+ P IK MWK A LP +++ + + + C RC
Sbjct: 916 ASVASIPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRC 975
Query: 1388 NNHNETLTHLFLDCNFASQVWNHLNFQMDYVKNGAT 1495
E+ THLF C FA+QVW Q V G++
Sbjct: 976 -GAPESTTHLFFHCEFAAQVWELAPLQETTVPPGSS 1010
Score = 25.8 bits (55), Expect(3) = 2e-63
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +3
Query: 915 IMQPNCFWSLGKGNKIRIWTDYWI 986
I++ W + G K+ IW D W+
Sbjct: 812 ILKEGLGWLITNGEKVSIWNDPWL 835