BLASTX nr result

ID: Papaver27_contig00024163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00024163
         (1455 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850652.1| hypothetical protein AMTR_s00034p00211890 [A...    48   6e-07

>ref|XP_006850652.1| hypothetical protein AMTR_s00034p00211890 [Amborella trichopoda]
           gi|548854321|gb|ERN12233.1| hypothetical protein
           AMTR_s00034p00211890 [Amborella trichopoda]
          Length = 282

 Score = 48.1 bits (113), Expect(2) = 6e-07
 Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
 Frame = -1

Query: 381 KFSLIGRLDLQKIKFVDASVILRSQWKLVGDCRLIPLGRGFFAIKLDNDQNK-------- 226
           KF+LIGRL+L+ +   +    +R  WKL+G   LI LG+GF   + +++ +         
Sbjct: 166 KFALIGRLNLRNLTIENLKKYVRENWKLIGRVTLIVLGKGFILFRFNSEADMTTIWRRGP 225

Query: 225 -----QHIKFQRWE 199
                Q ++FQRW+
Sbjct: 226 YRIDGQLLRFQRWQ 239



 Score = 33.9 bits (76), Expect(2) = 6e-07
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -3

Query: 175 RNWVHNFRPATQRTSKAMVWVRFPGLGLEFWNEIFCLQYVRKL 47
           + W  +F    Q TS A+ W+RFP L  E W++   L   R+L
Sbjct: 236 QRWQPDFN-VNQNTSHALQWIRFPDLPQEHWHDEILLHLQRQL 277


Top