BLASTX nr result
ID: Papaver27_contig00022784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00022784
(4889 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 159 e-123
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 174 e-121
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 189 e-121
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 184 e-118
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 166 e-117
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 149 e-117
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 148 e-111
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 163 e-110
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 170 e-104
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 170 e-104
gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea] 186 e-104
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 149 e-103
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 147 e-103
ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobrom... 130 1e-98
gb|ABA96650.1| retrotransposon protein, putative, unclassified [... 142 5e-96
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 186 7e-95
ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobrom... 130 1e-93
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana] 138 6e-90
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana] 138 1e-89
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 150 2e-87
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 159 bits (402), Expect(5) = e-123
Identities = 102/385 (26%), Positives = 176/385 (45%), Gaps = 12/385 (3%)
Frame = +2
Query: 776 SKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIV----PPVGSAGG 943
S+ L D L PD++FL ETK + + ++ + V G+ GG
Sbjct: 291 SRARTFRDLKDFLFVHKPDLIFLIETKMTEAQMGKLKARLRMDGVLCVGRNEDNGGARGG 350
Query: 944 LILAWKNNVNLTIIDYCENQ---INARILDQTTNSYWILSCFYGSPYRPLKFSSWQMIRG 1114
+ L W N V ++DY + INA + + FYG P + SW ++R
Sbjct: 351 MCLFWNNKV---VVDYISSSFYFINAMVTWEDKKKCRFTG-FYGHPETSQRHLSWDLLRS 406
Query: 1115 MATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYPFTWN 1294
+ +EPW+ G N +L NEK +Q + D F + G ++ F+G+ +TW+
Sbjct: 407 LRRVCSEPWLCCGDFNEILDFNEKTGAVQRSQRQIDGFRHAVEDCGLYEFAFTGFQYTWD 466
Query: 1295 NRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGA---- 1462
NRR G ++RLDRG N A + + + HL + SDH P+ N + G
Sbjct: 467 NRRKGDANVKERLDRGFGNLALIQQWGGISCHHLVSMSSDHCPLLFENDPPMSRGGNWRR 526
Query: 1463 -KPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINT 1639
+ F + + H CR ++E+ W ++ +L V L++WN+E +G++
Sbjct: 527 KRRFLFEDMWLTHEGCRGVVERQWLFGVNS-----VVGKLEQVAGGLKRWNQETFGSVKK 581
Query: 1640 NIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTH 1819
+ + +E+LD + P++ + ++ L + +E WK +++ GDRNT
Sbjct: 582 KVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLEREELLWKQRARVSWFKCGDRNTQ 641
Query: 1820 YFHDSARIRYRRNRIDTLSDGNGNW 1894
+FH +A+ R R NRI + + W
Sbjct: 642 FFHQTAKQRGRSNRICGILGEDNRW 666
Score = 149 bits (375), Expect(5) = e-123
Identities = 98/339 (28%), Positives = 159/339 (46%), Gaps = 13/339 (3%)
Frame = +2
Query: 3032 KLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNK 3211
K + F+ + + R+ GW+ L+ G+ ++IK V ++ Y M+ F+LP +NK
Sbjct: 1049 KKKLFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINK 1108
Query: 3212 IQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTS 3391
FWWGK + KG++ + W S DGGLGF++++LFN A++ K GWRL P S
Sbjct: 1109 CVARFWWGK--EGGKGIHWRRWSDLCFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDS 1166
Query: 3392 LCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTD 3571
L A +LKAKYFP D M + +L + S++ + G ++ W +G G ++ ++ D
Sbjct: 1167 LVARMLKAKYFPWDDFM--EAELGSSPSYLWRSFLWGRELLRKGVRWRIGDGKEVRVFID 1224
Query: 3572 FWIP--DKRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLD 3745
W+P P+L+ G F +V DL+ + LN F D I I +
Sbjct: 1225 PWVPGLPSFRPILR--QGAPLFLRVSDLLHNNGGWNMEALNYWFTDDECEAISSITVGAT 1282
Query: 3746 NREDTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXM---------IWNMKVSPSIKLFT 3898
R D W +NG++TV + +W +K+ P I F
Sbjct: 1283 RRPDVYMWNYCKNGRYTVKSGYWLACEENREEAINIVLAPRNFWKHLWKLKLPPKINHFL 1342
Query: 3899 WKMAHSILPNSMRVDAILPYI--NTTCLLCNEHDESLTH 4009
W+ + +P M V + +I + +C C + ES H
Sbjct: 1343 WRCSMGFIP-CMEV-LLWKHIAHSASCFRCQQGRESPVH 1379
Score = 110 bits (276), Expect(5) = e-123
Identities = 53/130 (40%), Positives = 79/130 (60%)
Frame = +1
Query: 2194 LKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAF 2373
+ + N S I+LIPK P TE+RPI LCN YK++SK++ANR+K +L ++I+ QSAF
Sbjct: 769 IADFNHSLIALIPKVQNPKKVTEYRPISLCNVVYKLVSKVLANRLKSVLPEVIAENQSAF 828
Query: 2374 IPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQ 2553
+ R + DNI A E+IH +DM+K +DRVEW FL ++ MGF
Sbjct: 829 MSQRIIHDNIIAAFEIIHCLKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMMEVMGFPD 888
Query: 2554 KWYNIIIQCL 2583
++ +I+ C+
Sbjct: 889 RFVFLIMDCV 898
Score = 83.2 bits (204), Expect(5) = e-123
Identities = 49/108 (45%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Frame = +3
Query: 2595 SIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVNHAPS 2774
S++L G+P G KPSRGLRQGDP+SPYLFL E LS I AE IHG I APS
Sbjct: 904 SVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQIHGVAIARGAPS 963
Query: 2775 ASHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQ-LSKPKQVGCF 2915
SH T L IF + ASGQ ++K K CF
Sbjct: 964 VSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICF 1011
Score = 33.5 bits (75), Expect(5) = e-123
Identities = 19/93 (20%), Positives = 41/93 (44%)
Frame = +3
Query: 1911 DISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
DI +F+++ T ++DE + + + ++ + L+ + EI+ L +M P+
Sbjct: 672 DIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVDATSKKSLDQVYRREEIELALKDMNPS 731
Query: 2091 KXXXXXXXXXXXXQRNWETISSDLVQMIQTFFS 2189
K Q+ W I +D+V + F +
Sbjct: 732 KSPGSDGMPARFFQKFWNIIGNDVVDVCLRFLN 764
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 174 bits (441), Expect(4) = e-121
Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 12/407 (2%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F + + +++ W++ + G+ I+IK V ++ Y M+ F+LPK +C+++
Sbjct: 742 FREVKLRVLSKINNWQHKMFSSGGKEILIKAVAQAVPAYAMSVFKLPKGLCEEIQSEIAK 801
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG D +G++ WD S + + GGLGF++ FN AM+AK GWRL + P SL +
Sbjct: 802 FWWGSKKDK-RGIHWARWDKLSCAKSRGGLGFRDFISFNQAMVAKQGWRLIQFPNSLVSK 860
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWI- 3580
+L+A+YF + LD K N S+I + I G + IQ + W +G G I ++ D WI
Sbjct: 861 VLRARYFKSCS--FLDAKPGSNPSFIWRSILWGRQVIQKGARWRIGNGSNILVYKDNWIP 918
Query: 3581 -PDKRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNRED 3757
PD P+ P+ V +L+ + KLN F ++ I +I +P + D
Sbjct: 919 RPDTFKPISPPTLPI--DTTVGELMDDENNWNVAKLNQHFMQEDTEAILKIPLPRSQKVD 976
Query: 3758 TTTWTLNRNGKFTV---------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKMA 3910
W +++G+++V +W+M++ +K+F W+ A
Sbjct: 977 EMMWHYDKHGEYSVKSGYQIALKLKAPDEPSNSGSNSKRWKAVWSMELPEKMKIFMWRAA 1036
Query: 3911 HSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDYVKNDSH 4090
++LP + + + C CN E++ H LD A ++W H S+ +
Sbjct: 1037 RNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNAQNQ 1096
Query: 4091 TCHDWI-NSWCTLSERNGIKMGRAELRSTVTWHFWKARCGKVFEKKK 4228
++I W T + +AE W W AR ++FE KK
Sbjct: 1097 DILEFIYEVWSTWGKT------KAEQTIAFCWAIWFARNKRIFEGKK 1137
Score = 152 bits (383), Expect(4) = e-121
Identities = 93/359 (25%), Positives = 162/359 (45%), Gaps = 9/359 (2%)
Frame = +2
Query: 860 QTKNVEIILRKINIQNYWIVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNS 1039
+ K V + N +N++ V G GGL L W +NV + I Y + I+A ++
Sbjct: 2 RAKQVNFENKHFNFENHFAVDRNGLGGGLALFWTSNVEVEIKSYSLHHIDA-LVKTGNGK 60
Query: 1040 YWILSCFYGSPYRPLKFSSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEA 1219
W + YG P K ++W +++ +A + PW G N +L EK N
Sbjct: 61 VWRCTGVYGHPETNQKHNTWTLLKRLAGIFSYPWCCFGDFNEILNLQEKSGGNEKNIDMV 120
Query: 1220 DNFIDMLNSLGQHDLGFSGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLP 1399
F + + + D+G+ G+PFTW+NRR G F E+RLDR + +N W N+ T+L
Sbjct: 121 VQFREAVQACNLVDVGYRGHPFTWSNRRYGQHFIEERLDRFLCSNDWSENFHDMAATNLV 180
Query: 1400 PLLSDHVPISLNNHVTWNDGAKPFK------YFGPRIDHPQCRRLIEKAWSVHISG---S 1552
+SDH PI + D + K Y + C+ ++ W+ G +
Sbjct: 181 NWVSDHCPILMEVRERSKDRSHGKKSIHREHYEDMWSSYEACKNIVRNEWASMGRGAREN 240
Query: 1553 PAF*FTKRLGNVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPSNIKSRELAKITHE 1732
P F + N +L+ W+K + + +L A + ++ +I ++
Sbjct: 241 PVKHFQQAAKNSLANLKIWSKSEFADRKKKQDQLINQLIHAKHGSAQRMNGDQIRRIENQ 300
Query: 1733 LTNWYKIKEEFWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSKK 1909
+ +E +W+ +S+ + + GDRNT YFH A R R+N+I + + +G W ++
Sbjct: 301 INGMLMDEEIYWRQRSRAEWLKEGDRNTKYFHSKASARRRKNKIWGIENSHGQWTEDQR 359
Score = 148 bits (373), Expect(4) = e-121
Identities = 100/289 (34%), Positives = 143/289 (49%), Gaps = 9/289 (3%)
Frame = +1
Query: 2194 LKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAF 2373
L +N +FI+LIPKT KP TEFRPI LCN Y+I++K IANR+KP+L+QIISP QSAF
Sbjct: 459 LSALNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAF 518
Query: 2374 IPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQ 2553
IP R +SDN+ + +E +H +D+SK +DRVEW FL + +K+GFS+
Sbjct: 519 IPNRLISDNVIIGYECLHKIRHSQGKKKGLVALKLDISKAYDRVEWTFLKQTMKKLGFSR 578
Query: 2554 KWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGRE---------IPCLLTYSSFAWKHYL 2706
KW +I+ C+ ++ E R+ I C +SS L
Sbjct: 579 KWLELIMGCITSVSFSVIINGTPKGFFHPERGLRQGCPLSPYLFIICTEVFSSL----LL 634
Query: 2707 EPFHMLKTSISFMATKLSIMHLLPVIYYLQMTAFFSVMLLLMQVKTLSEFSRISVKLLAN 2886
+ + S A ++I HLL + + FS + + K L K
Sbjct: 635 QAETKKRISGLRFAEDVTISHLL----FADDSLVFST-ASVAECKHLKGIFDRYAKASGQ 689
Query: 2887 *VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
N KS +FF I ++ I +I N+ +S +KYLG P R K
Sbjct: 690 IFNFEKSSMFFGGKIPEEQKAAIRNIFNLNVVSKYEKYLGLPSMIGRKK 738
Score = 36.6 bits (83), Expect(4) = e-121
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Frame = +3
Query: 1905 KKDISDCLTKHFQHISTTVSPT---IDENLIGLIPTCINNSENALLETIPFYTE-IKNIL 2072
++++ ++FQ++ TT SP I + L G+ P N + L E PF E I L
Sbjct: 358 QREVEKEFCEYFQNLFTTSSPNQSQIQDALDGISPKVTTNMNHQLEE--PFTEEEIVEAL 415
Query: 2073 FNMEPNKXXXXXXXXXXXXQRNWETISSDLV 2165
M P K Q++W+T+ S ++
Sbjct: 416 HQMSPTKAPGPDGLPAAFFQKHWQTVRSSVI 446
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 189 bits (481), Expect(4) = e-121
Identities = 111/389 (28%), Positives = 190/389 (48%), Gaps = 2/389 (0%)
Frame = +2
Query: 734 IKTIAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYW 913
+K ++WN QGL NP N+L+ L + P+I+F+ ET ++ +E I ++ N
Sbjct: 1 MKLLSWNCQGLANPW---TVNALHSLCWRDRPNIVFVMETMVDSQVLEKIRKRCGFMNGL 57
Query: 914 IVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFS 1093
+ G++GG+ L W N +++T+ + + I+A +LD+ N W YG P K
Sbjct: 58 CLSSNGNSGGMGLWW-NEMDVTVESFSAHHIHAVVLDENKNPIWNAMGIYGWPETSNKHL 116
Query: 1094 SWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFS 1273
+W ++R + + P + G N + EK+ + D F ++++ DLG+
Sbjct: 117 TWSLLRRLKQQCSLPVLFFGDFNEITSIEEKEGGAPRCERVMDAFREVIDDCAVKDLGYV 176
Query: 1274 GYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHV--T 1447
G FTW +RLDR + N+ W +N+P+ + HLP SDH P+ L V +
Sbjct: 177 GNRFTWQRGNSPSTLIRERLDRMLANDEWCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDS 236
Query: 1448 WNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYG 1627
+ G K FK+ + +C +++E+AW+ GS T RL V L W + +G
Sbjct: 237 FRRGNKLFKFEAMWLSKEECGKIVEEAWN----GSAGEDITNRLDEVSRSLSTWATKTFG 292
Query: 1628 NINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGD 1807
N+ + L+ + P + ++ +L ++++E +W +++ I GD
Sbjct: 293 NLKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLEESYWHARARANEIRDGD 352
Query: 1808 RNTHYFHDSARIRYRRNRIDTLSDGNGNW 1894
+NT YFH A R RRN I+ L D NG W
Sbjct: 353 KNTKYFHHKASQRKRRNTINELLDENGVW 381
Score = 139 bits (349), Expect(4) = e-121
Identities = 90/352 (25%), Positives = 158/352 (44%), Gaps = 12/352 (3%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F I + + +L GWK L+ G+ ++IK V ++ Y M+ F LP + +++ +
Sbjct: 768 FACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLAR 827
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG DT + ++ WD+ + GGLGF+++ FN +++AK WRL +L
Sbjct: 828 FWWGSS-DTNRKMHWHSWDTLCYPKSMGGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYR 886
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWI- 3580
LL+A+YF ++++ L+ + N S+ + I + W VG G++I +W D WI
Sbjct: 887 LLQARYFKSSEL--LEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWIL 944
Query: 3581 PDKRHPLLKPSTGTYNFNQVCDLITQAK-TLDETKLNTCFDRDTIIKIKQIQIPLDNRED 3757
+ H + P + +VCDLI A+ + + F + + I + +D
Sbjct: 945 GEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDD 1004
Query: 3758 TTTWTLNRNGKFTV----------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKM 3907
W +RNG F+V +W ++ P + F W+
Sbjct: 1005 HRYWWPSRNGIFSVRSCYWLGRLGPVRTWQLQHGERETELWRRVWQLQGPPKLSHFLWRA 1064
Query: 3908 AHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFS 4063
L R+ + ++ TC +C + DES+ H D FA +W F+
Sbjct: 1065 CKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFA 1116
Score = 134 bits (338), Expect(4) = e-121
Identities = 96/295 (32%), Positives = 140/295 (47%), Gaps = 18/295 (6%)
Frame = +1
Query: 2203 INSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAFIPG 2382
+N + I LIPK P + +FRPI LC YKI+SK +ANR+K +L IISP QSAF+P
Sbjct: 487 VNKTCIVLIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRLKVILPAIISPNQSAFVPR 546
Query: 2383 RKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQKWY 2562
R ++DN VA E+ H +DMSK +DRVEW FL ++ +KMGF W
Sbjct: 547 RLITDNALVAFEIFHAMKRKDANKNGVCALKLDMSKAYDRVEWCFLERVMKKMGFCDGWI 606
Query: 2563 NIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHMLKTSISF 2742
+ ++ C ++ S V G L + P+ L + +F
Sbjct: 607 DRVMAC------------ISSVSFTFNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAF 654
Query: 2743 MATKLS------------IMHLLPVIYYLQMTAFFSVMLLLMQVKTLSEFSRIS------ 2868
+T LS I PV+ +L FF+ +L ++ E S ++
Sbjct: 655 -STLLSKAASEKKIHGAQICRGAPVVSHL----FFADDSILFTKASVQECSMVADIISKY 709
Query: 2869 VKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
+ VNLSK+ V FS +D + I+++L VK + +KYLG P RSK
Sbjct: 710 ERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSK 764
Score = 45.8 bits (107), Expect(4) = e-121
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +3
Query: 1905 KKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNME 2084
+++I + +F+ + T SP E + + C++ N L +P E+K LF M
Sbjct: 385 REEICGVVQHYFEGLFATDSPVNMELALEGLSHCVSTDMNTALLMLPSGDEVKEALFAMH 444
Query: 2085 PNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
PNK Q+ W + SD++ +Q+++
Sbjct: 445 PNKAPGIDGLHALFFQKFWHILGSDVISFVQSWW 478
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 184 bits (466), Expect(4) = e-118
Identities = 110/397 (27%), Positives = 194/397 (48%), Gaps = 9/397 (2%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
++WN +G+G+PS ++L LL ENP I+FLSETK ++ +E + +K+ ++ V
Sbjct: 5 LSWNCRGMGSPSA---LSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVD 61
Query: 923 PVGSA----GGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKF 1090
G GGL + W++ + + ++ N I+ ++ + W + YG P K
Sbjct: 62 CEGECRKRRGGLAMLWRSEIKVQVMSMSSNHIDI-VVGEEAQGEWRFTGIYGYPEEEHKD 120
Query: 1091 SSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGF 1270
+ ++ +A PW+ G N++L +EKK FN EAD F + + DLGF
Sbjct: 121 KTGALLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGF 180
Query: 1271 SGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPI-----SLN 1435
GY FTW N R G ++RLDR + N+ W +P S ++HLP SDHVPI
Sbjct: 181 VGYEFTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQ 240
Query: 1436 NHVTWNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNK 1615
+ T +K F++ + + ++++ W + G+ A L + L W+K
Sbjct: 241 SAATRTKKSKRFRFEAMWLREGESDEVVKETW---MRGTDA---GINLARTANKLLSWSK 294
Query: 1616 EIYGNINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHI 1795
+ +G++ I+ C+ ++ ++ PS + + + K +E +W +S++ I
Sbjct: 295 QKFGHVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWI 354
Query: 1796 ALGDRNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSK 1906
GD+NT +FH A R +RN + + + G W +
Sbjct: 355 KSGDKNTKFFHQKASHREQRNNVRRIRNEAGEWFEDE 391
Score = 172 bits (437), Expect(4) = e-118
Identities = 117/413 (28%), Positives = 186/413 (45%), Gaps = 13/413 (3%)
Frame = +2
Query: 3032 KLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNK 3211
K R F+ I + +L GWK +L+ GR ++IK V ++ Y M CF +PK I + K
Sbjct: 770 KKRVFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEK 829
Query: 3212 IQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTS 3391
+ R+F+WG+ + + V W+ +GGLG +N +FN A++AK WR+ P S
Sbjct: 830 MCRNFFWGQK-EEERRVAWVAWEKLFLPKKEGGLGIRNFDVFNRALLAKQAWRILTKPDS 888
Query: 3392 LCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTD 3571
L A ++K KYFP ++ L+ ++ N S+ K I S IQ V+G G IW D
Sbjct: 889 LMARVIKGKYFPRSN--FLEARVSPNMSFTCKSILSARAVIQKGMCRVIGDGRDTTIWGD 946
Query: 3572 FWIPDKRHPLLKPSTGTYNFN---QVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPL 3742
W+P + + G + +VC+LI+ + E LNT F I++I + L
Sbjct: 947 PWVPSLERYSIAATEGVSEDDGPQKVCELISNDRWNVEL-LNTLFQPWESTAIQRIPVAL 1005
Query: 3743 DNREDTTTWTLNRNGKFTV----------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKL 3892
+ D W +++NG+FTV IW K+ P +KL
Sbjct: 1006 QKKPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKL 1065
Query: 3893 FTWKMAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDY 4072
F+WK H+ L + I+ C C E +E+ HL + + + W +
Sbjct: 1066 FSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHT 1125
Query: 4073 VKNDSHTCHDWINSWCTLSERNGIKMGRAELRSTVTWHFWKARCGKVFEKKKI 4231
++ + W+ S L + L + W+ W R VFEKKK+
Sbjct: 1126 GNIEAGSFRIWVES--LLDTHKDTEWW--ALFWMICWNIWLGRNKWVFEKKKL 1174
Score = 112 bits (279), Expect(4) = e-118
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 15/292 (5%)
Frame = +1
Query: 2203 INSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAFIPG 2382
+N + I LIPK + +FRPI LCN YKI++K++ANRMK +L +I QS F+PG
Sbjct: 493 VNQTHIVLIPKKKHCESPVDFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPG 552
Query: 2383 RKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQKWY 2562
R ++DN+ VA+E H +DMSK +DRVEW FL + K+GF ++
Sbjct: 553 RLITDNVLVAYECFHFLRKKKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYT 612
Query: 2563 NIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKH--YLEPFHML---- 2724
+++ C+ +S VL P + S + L PF +
Sbjct: 613 KLVMNCV--------------TSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAE 658
Query: 2725 -KTSISFMATKLSIMHLLPVIYYLQMTA--FFSVMLLLM------QVKTLSEFSRISVKL 2877
+++ A + ++H + + + + + FF+ LL +V+ + +
Sbjct: 659 GLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAA 718
Query: 2878 LAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
+N+ KS + +S +++P+K + L K + +KYLG P F SK
Sbjct: 719 SGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSK 770
Score = 31.2 bits (69), Expect(4) = e-118
Identities = 16/96 (16%), Positives = 39/96 (40%)
Frame = +3
Query: 1911 DISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
D+++C +F+++ + + + ++ ++ I + L+ E+ L M PN
Sbjct: 393 DVTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELGTQLDAPFRREEVSAALAQMHPN 452
Query: 2091 KXXXXXXXXXXXXQRNWETISSDLVQMIQTFFSHAE 2198
K Q W+TI D+ + ++ +
Sbjct: 453 KAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVD 488
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 166 bits (420), Expect(4) = e-117
Identities = 100/370 (27%), Positives = 187/370 (50%)
Frame = +2
Query: 797 SLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVPPVGSAGGLILAWKNNVNL 976
+L + NP+ILFL ET+QQ ++ R + ++ +V P+ + GL L W + V +
Sbjct: 623 TLRRICKKHNPEILFLMETRQQEGIIKEWKRNLKFTDHHVVDPIATGRGLALFWGDAVQV 682
Query: 977 TIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQMIRGMATFITEPWIILG* 1156
+I+D N ++ + + ++ YG+P+ K + W+++ + PW++LG
Sbjct: 683 SILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRFPVQSLPWLVLGD 742
Query: 1157 CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYPFTWNNRRIGPDFTEQRLD 1336
N VL +EK F D LN+ DL F G F+W R G F ++RLD
Sbjct: 743 FNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLD 802
Query: 1337 RGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGAKPFKYFGPRIDHPQCRRL 1516
R + N AW ++ P + I HLP + SDH P+ L+++ + + F++ H + +
Sbjct: 803 RALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDV 862
Query: 1517 IEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPSN 1696
I+++W GS + + L + L+ W+KE + N + + + ++ +++ P +
Sbjct: 863 IQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSNPPD 922
Query: 1697 IKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLS 1876
++ +T ++T + E +W +S+ + LGD+N+ +FH + R + N+I L
Sbjct: 923 -AHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLK 981
Query: 1877 DGNGNWLHSK 1906
D +GNWL S+
Sbjct: 982 DDHGNWLDSE 991
Score = 154 bits (389), Expect(4) = e-117
Identities = 96/300 (32%), Positives = 149/300 (49%), Gaps = 13/300 (4%)
Frame = +1
Query: 2185 SHMLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQ 2364
S +L+ +N + ++LIPK P + +RPI LCN SYKI++K+IA+R++P ++++IS Q
Sbjct: 1087 SSLLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSELISDNQ 1146
Query: 2365 SAFIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMG 2544
SAF+ R++ DN+ +AHE+ H +DM+K +DRVEWNFL + RKMG
Sbjct: 1147 SAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWNFLEAVLRKMG 1206
Query: 2545 FSQKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHML 2724
F W +++ C+ S L + + G+ P L L PF L
Sbjct: 1207 FVDSWIGLVMSCVTTSSL------------SVLINGKPGPSFLPSRGLRQGDPLSPFLFL 1254
Query: 2725 KTS--ISFMATKLSIMHL----------LPVIY-YLQMTAFFSVMLLLMQVKTLSEFSRI 2865
+ +S M K+ L LPV + + + F + L +TLS+
Sbjct: 1255 FVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHT 1314
Query: 2866 SVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSKIKRL 3045
+N+ KS +FFSP+ P + SI+ + +S YLG P F +RSK K L
Sbjct: 1315 YCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKAL 1374
Score = 149 bits (377), Expect(4) = e-117
Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 5/247 (2%)
Frame = +2
Query: 3074 RLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRDFWWGKHIDTP 3253
++ GWK L+ G+ ++IK V +++ Y M CF+ P +CK+LN I DFWWG ++DT
Sbjct: 1384 KVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWWG-NVDT- 1441
Query: 3254 KGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCASLLKAKYFPNT 3433
+G++ K WD ++ DGG+GF+N+ FN++++AK WRL++NP +L A +L+ Y+P +
Sbjct: 1442 RGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALWARVLEQLYYPRS 1501
Query: 3434 DVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIPDKRHPLLKPS 3613
L+ N SWI + G I + W +G G +NI D WIP + PS
Sbjct: 1502 S--FLEAPKGPNPSWIWNSLLIGRNFIHKEALWNIGNGFSVNIVGDNWIPS-----IPPS 1554
Query: 3614 TGTYNFNQ----VCDLIT-QAKTLDETKLNTCFDRDTIIKIKQIQIPLDNREDTTTWTLN 3778
T + N+ VC+LI K+ + + I I I DT W
Sbjct: 1555 TVSLPLNEDNSRVCELINWDTKSWELDHFAETITPTQRLLISAIPITSLAAPDTLIWPYT 1614
Query: 3779 RNGKFTV 3799
++G ++V
Sbjct: 1615 KDGVYSV 1621
Score = 26.2 bits (56), Expect(4) = e-117
Identities = 15/82 (18%), Positives = 31/82 (37%)
Frame = +3
Query: 1911 DISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
D++ +F + + P E ++ + T + N +L + E+K +F++
Sbjct: 993 DVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGAT 1052
Query: 2091 KXXXXXXXXXXXXQRNWETISS 2156
K Q WE + S
Sbjct: 1053 KAPGPDGFSGIFYQNQWEWVQS 1074
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 149 bits (377), Expect(6) = e-117
Identities = 100/396 (25%), Positives = 185/396 (46%), Gaps = 8/396 (2%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
++WN +GLGNP +L L ++PD++FL ETK++ + + I + + +V
Sbjct: 4 VSWNVRGLGNP---HTFRALKKFLRAKDPDLVFLMETKKKKQEMANICFDLGFEGCSVVG 60
Query: 923 PVG-SAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSW 1099
VG S+GGL + WKN + + + + I+ +L + ++ FYG+P L+ SW
Sbjct: 61 KVGFSSGGLAMCWKNKMEVRPVGSSQGHIDVAVLFK--GQVIRVTGFYGNPDSQLRHFSW 118
Query: 1100 QMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGY 1279
++R +A + PWI+ G N +L +K+ + + F + ++ G ++ FSG
Sbjct: 119 DLLRRIAKSVRGPWIVFGDFNELLCIGDKRGGGERPEAQIRRFREAVDECGLQEVEFSGP 178
Query: 1280 PFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVT---- 1447
FTW + +RLDR +N +P H+ SDH+ + L +
Sbjct: 179 TFTWKRGTL-----LERLDRCFINEEAGVLFPRFHEAHVDVGASDHLSLVLFSEGLNCGR 233
Query: 1448 ---WNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKE 1618
W G + F++ + ++++ AW G+ +L V +L++WN+
Sbjct: 234 KGGWK-GLRRFQFEPFWAKEQESKQVVADAWQS--DGNQLNNVRAKLAGVSKELQRWNEN 290
Query: 1619 IYGNINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIA 1798
+G I I+ ++L+ + + I EL +I+E W+ +S+ +
Sbjct: 291 KFGLIPKKIRQLNKELEQCPFDSSDEVVQNRRNAIVAELNKSLEIEESIWRQRSRINWLQ 350
Query: 1799 LGDRNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSK 1906
GDRNT +FH A+ R R+NR+ + G W+ +
Sbjct: 351 EGDRNTKFFHGFAKGRGRKNRVLGIMSSTGEWIEQE 386
Score = 137 bits (344), Expect(6) = e-117
Identities = 112/420 (26%), Positives = 173/420 (41%), Gaps = 23/420 (5%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F+ I + + L GW++ L+ G+TI+IK V ++ Y M+ F+L K +C+ +
Sbjct: 769 FKRIHERLDQHLQGWQSRLLSKAGKTILIKAVAQAIPSYTMSVFKLSKGVCRIYQSKVAN 828
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
+WWG G++ WD ++ DGGLGF++I FN A++AK WR+ PTSL
Sbjct: 829 YWWGSG-GKKNGIHWCKWDLLCRNKMDGGLGFRDIECFNQALLAKTVWRIVMQPTSLANR 887
Query: 3404 LLKAKYFPNTD--VMHLDPK---LKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWT 3568
+L+AKY D + PK + ++ W K + +GIR W VG G I IW
Sbjct: 888 VLQAKYVHGGDWAAAPIGPKPSFIWRSLVWGKKLLCAGIR-------WRVGNGTAIRIWE 940
Query: 3569 DFWIPDKRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDN 3748
D W+P + + +V L+T D + T F KI I + +
Sbjct: 941 DKWLPSPWSFRVVTPRFMDSNTRVSTLMTSPSMWDVIFIQTHFLPVDADKILSIPVCERS 1000
Query: 3749 REDTTTWTLNRNGKFTV---------------XXXXXXXXXXXXXXXXXXMIWNMKVSPS 3883
D W +G +TV +IW + V
Sbjct: 1001 GSDVAIWHYTNDGYYTVKSGYWLAMELKQVGKSTSSSGEKGETNSNSVWSIIWGLSVPNK 1060
Query: 3884 IKLFTWKMAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFS 4063
+KLF W+ H+ LP R+ + C C ES+ H A +VW + ++
Sbjct: 1061 VKLFLWRACHAFLPCVERLFKRKVCSSDICSRCGGASESVLHSLWACRIAQKVWKY-SWL 1119
Query: 4064 MDYVKNDSHTCHDW-INSWCTLSERNGIKMGRAELR--STVTWHFWKARCGKVFEKKKIK 4234
VK W S+ L R ++ EL V W WK R + K+ +K
Sbjct: 1120 AGVVKL-------WKFQSFSDLLHRVAMEGTNKELDLFGLVCWWIWKCRNDTIHGKEGLK 1172
Score = 126 bits (316), Expect(6) = e-117
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 2194 LKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAF 2373
+K++N + ++LIPK P +FRPI LCN YK+ISK + NRMK LL ++IS YQSAF
Sbjct: 485 VKDLNHTLLALIPKIENPQGVADFRPISLCNVLYKLISKAMVNRMKVLLPEVISCYQSAF 544
Query: 2374 IPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQ 2553
+PGR + DN+ A E+IH +D+SK +DRVEW FL I K+GFS+
Sbjct: 545 VPGRCIHDNVVTAFEVIHSIRNKQTGTHPYCVLKLDISKAYDRVEWIFLRNIMLKLGFSE 604
Query: 2554 KWYNIIIQCL 2583
+W ++++C+
Sbjct: 605 RWVELVMKCV 614
Score = 68.2 bits (165), Expect(6) = e-117
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +3
Query: 2595 SIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVNHAPS 2774
SI+ NG G SRGLRQGDPLSPYLFL C E L+ + E L+HG K+ +P
Sbjct: 620 SILWNGKAMGMINLSRGLRQGDPLSPYLFLLCSEGLTSLFQNVEREGLVHGAKVSEGSPP 679
Query: 2775 ASH 2783
SH
Sbjct: 680 ISH 682
Score = 32.7 bits (73), Expect(6) = e-117
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +1
Query: 2890 VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
VN KS V F P + ++ I + L V + +KYLG P R+K
Sbjct: 718 VNFQKSAVAFGPGLLEEQKSLIATFLGVLVVPFHEKYLGLPTVAGRNK 765
Score = 22.7 bits (47), Expect(6) = e-117
Identities = 16/84 (19%), Positives = 29/84 (34%)
Frame = +3
Query: 1911 DISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
+I HF + T+ E ++ + + + NA L +I L M P+
Sbjct: 388 EIQQAFNTHFSQLFTSEGCDHMELVLDTVQRKVTDDMNAKLNKPFTKLDIDEALKQMGPD 447
Query: 2091 KXXXXXXXXXXXXQRNWETISSDL 2162
K Q WE + ++
Sbjct: 448 KSPGEDGFSARFYQAYWEIVGDEV 471
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 148 bits (373), Expect(6) = e-111
Identities = 113/417 (27%), Positives = 175/417 (41%), Gaps = 14/417 (3%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F I+ ++ R W L+ G+ I++K V SSM Y M CF+LP +CK + +
Sbjct: 706 FSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTR 765
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWW D K ++ WD + I +GGLGF+ I AK+ WR+ + P SL +
Sbjct: 766 FWWDSKPDKRKMAWV-SWDKLTLPINEGGLGFREIE-------AKLSWRILKEPHSLLSR 817
Query: 3404 LLKAKYFPNTDVMHLDPKLK-QNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWI 3580
+L KY + M + W +GI +G ++ W +G+GD IN+WT+ W+
Sbjct: 818 VLLGKYCNTSSFMDCSASPSFASHGW--RGILAGRDLLRKGLGWSIGQGDSINVWTEAWL 875
Query: 3581 -PDKRHPLLKPSTGTYNFNQVCDLI---TQAKTLDETKLNTCFDRDTIIKIKQIQIPLDN 3748
P + P T T V DLI ++ ++ + + D I KI +PL
Sbjct: 876 SPSSPQTPIGPPTETNKDLSVHDLICHDVKSWNVEAIRKHLPQYEDQIRKITINALPL-- 933
Query: 3749 REDTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXM-----IWNMKVSPSIKLFTWKMAH 3913
+D+ W ++G++T IW + SP +K F WK
Sbjct: 934 -QDSLVWLPVKSGEYTTKTGYALAKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMK 992
Query: 3914 SILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDYVKNDSHT 4093
LP + TC C + + SL HL L +A +VW + N S
Sbjct: 993 GALPVGEALSRRNIEAEVTCKRCGQTESSL-HLMLLCPYAKKVWE----LAPVLFNPSEA 1047
Query: 4094 CHDWINSWCTLSER----NGIKMGRAELRSTVTWHFWKARCGKVFEKKKIKTVGIHL 4252
H + ++R +G A L + WH WKAR +F+ G+ L
Sbjct: 1048 THSSVALLLVDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRLIFDNHSCSEEGLVL 1104
Score = 124 bits (311), Expect(6) = e-111
Identities = 51/137 (37%), Positives = 88/137 (64%)
Frame = +1
Query: 2173 FKLFSHMLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQII 2352
F + S + +N + ++LIPK + P +++RPI LCN YKI++K++ R++P L+++I
Sbjct: 415 FFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELI 474
Query: 2353 SPYQSAFIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKIT 2532
S +QSAF+PGR ++DN+ + HE++H DMSK +DR++WNFL ++
Sbjct: 475 SLHQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVL 534
Query: 2533 RKMGFSQKWYNIIIQCL 2583
++GF KW ++QC+
Sbjct: 535 MRLGFHDKWIRWVMQCV 551
Score = 118 bits (295), Expect(6) = e-111
Identities = 92/356 (25%), Positives = 153/356 (42%), Gaps = 1/356 (0%)
Frame = +2
Query: 848 ETKQQTKNVEIILRKINIQNYWIVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQ 1027
ETK Q + + + + + +PP G +GGL L WK NV + I++ N I+ R
Sbjct: 2 ETKNQDEFISKTFDWMGYAHRFTIPPEGLSGGLALYWKENVEVEILEAAPNFIDNR---- 57
Query: 1028 TTNSYWILSCFYGSPYRPLKFSSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFN 1207
S F W I + + W++ G N +L +EK+
Sbjct: 58 --------SVF------------WDKISSLGAQRSSAWLLTGDFNDILDNSEKQGGPLRW 97
Query: 1208 QVEADNFIDMLNSLGQHDLGFSGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTI 1387
+ F ++ G D+ +G +W R F + RLDR + N +W +P S
Sbjct: 98 EGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRYS-HFIKSRLDRALGNCSWSELFPMSKC 156
Query: 1388 THLPPLLSDHVPISLNNHVTWNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*F 1567
+L SDH P+ +KPF++ + + R L+++ W + S +
Sbjct: 157 EYLRFEGSDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELARQDSVLY-- 214
Query: 1568 TKRLGNVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPSNIKSREL-AKITHELTNW 1744
++ + + KW KE N I+ ++ L+ A L ++I L IT EL
Sbjct: 215 --KISRCRQSIIKWTKEQNSNSAKAIKKAQQALESA---LSADIPDPSLIGSITQELEAA 269
Query: 1745 YKIKEEFWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSKKR 1912
Y+ +E FWK S+ Q + GDRN YFH + R R N + + DG+G H +++
Sbjct: 270 YRQEELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQ 325
Score = 68.9 bits (167), Expect(6) = e-111
Identities = 38/101 (37%), Positives = 49/101 (48%)
Frame = +3
Query: 2583 TTILSIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVN 2762
T S ++NGSP G PSRGLRQGDPLSPYLF+ C E LS A+ ++ G ++
Sbjct: 553 TVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVAR 612
Query: 2763 HAPSASHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQ 2885
+P +H L I K + ASGQ
Sbjct: 613 GSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQ 653
Score = 33.1 bits (74), Expect(6) = e-111
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +3
Query: 1905 KKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNME 2084
++ I+ ++ +FQ+I TT + + + + + I++ N L I EIK LF++
Sbjct: 323 EEQIASTISSYFQNIFTTSNNSDLQVVQEALSPIISSHCNEELIKISSLLEIKEALFSIS 382
Query: 2085 PNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
+K W+ I +D+ + I++FF
Sbjct: 383 ADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFF 416
Score = 23.9 bits (50), Expect(6) = e-111
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 2890 VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
+NL+KS + FS + +R + L + KYLG P R K
Sbjct: 655 INLAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEHFGRRK 702
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 155 bits (391), Expect(5) = e-110
Identities = 102/391 (26%), Positives = 185/391 (47%), Gaps = 4/391 (1%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
+ WN +G+GN + + +L+ ++FL ET+Q + + + ++ ++ +
Sbjct: 4 LIWNCRGIGNAATVRDLCALS---REAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGEN 60
Query: 923 PVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQ 1102
G +GGL L W +V + I E I+A + + W ++ YG P + W
Sbjct: 61 CNGMSGGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGEPRVEHRHRMWS 120
Query: 1103 MIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYP 1282
M+ + PW++LG N L++ E S+ ++V+ F D+L + HDLGF G P
Sbjct: 121 MLNSIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKGLP 180
Query: 1283 FTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGA 1462
+T++N+R G + RLDR + ++ W + + +S + HL S+H P+ L V N A
Sbjct: 181 YTYDNKREGINNVRVRLDRVVADDGWRDMFRSSQVEHLISPCSNHCPVVLKFCVDTNQPA 240
Query: 1463 K----PFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGN 1630
+ ++ F R + +I+++W+ S ++ L V L W++ N
Sbjct: 241 RRKCLHYEIFWER--EAELVEVIDESWAALGDKSDLADISRALSQVMAKLHSWSRRKCKN 298
Query: 1631 INTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDR 1810
+ I+ +++L + + S SR + + L +E W +S+ + GDR
Sbjct: 299 VGREIEKGRKRLAEL---IESGADSRSIRSASDNLHELLYREEMLWLQRSRVNWLKEGDR 355
Query: 1811 NTHYFHDSARIRYRRNRIDTLSDGNGNWLHS 1903
NT +FH A R ++NRI L D G +HS
Sbjct: 356 NTRFFHSKAVWRAKKNRITKLKDREGT-VHS 385
Score = 126 bits (316), Expect(5) = e-110
Identities = 61/168 (36%), Positives = 100/168 (59%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F+ + + + RL+ W L+ G+ ++IK V ++ +Y M F+LP+ +C++L K+ R+
Sbjct: 770 FQSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRN 829
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG K + K W+ ++ ++GGLGF++ LFN A++A+ WRL NP SLCA
Sbjct: 830 FWWGVEKGKRK-THWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCAR 888
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKG 3547
+LKAKYFPN + +D N S + K I+ G+ ++ W +G G
Sbjct: 889 VLKAKYFPNGSL--VDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNG 934
Score = 114 bits (285), Expect(5) = e-110
Identities = 51/131 (38%), Positives = 81/131 (61%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M + +N + I LIPK +P+ +FRPI LCN YK++SK + NR++P+L++++SP QSA
Sbjct: 485 MPEGVNDTAIVLIPKIEQPMELRDFRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSA 544
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+ GR ++DN +A E H +D+SK +DRV+W FL + K+GF+
Sbjct: 545 FVLGRMITDNAILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFA 604
Query: 2551 QKWYNIIIQCL 2583
+W I+ C+
Sbjct: 605 HRWVRWIMVCI 615
Score = 64.7 bits (156), Expect(5) = e-110
Identities = 38/119 (31%), Positives = 52/119 (43%)
Frame = +3
Query: 2583 TTILSIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVN 2762
T S+ NG+ F PSRGLRQGDPLSP+LFLF + LS + + KI
Sbjct: 617 TVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQGALSPVKICR 676
Query: 2763 HAPSASHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQLSKPKQVGCFL*PTHRPQ 2939
AP SH ++ + + D+ A+GQL P + + PQ
Sbjct: 677 QAPGISHLLFADDTLLFFKADNVQAQAVKEVISDYASATGQLINPAKCSIMFGESSPPQ 735
Score = 33.9 bits (76), Expect(5) = e-110
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 1914 ISDCLTKHFQHISTTVSPTIDENLIG-LIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
+ D T++F+ + + P +D++ + LI ++ + N L + EI N +F + P
Sbjct: 390 LEDMATEYFKEVFSA-DPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPL 448
Query: 2091 KXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
K QR+W + +D+V+ ++ FF
Sbjct: 449 KAPGPDGFPARFYQRHWGFMKNDIVRAVKLFF 480
Score = 163 bits (412), Expect(5) = 2e-91
Identities = 87/257 (33%), Positives = 143/257 (55%), Gaps = 5/257 (1%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F+ + + + RL+ W L+ G+ ++IK V ++ +Y M F+LP+ +C++L K+ R+
Sbjct: 1468 FQSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRN 1527
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG K + K W+ ++ ++GGLGF++ LFN A++A+ WRL NP SLCA
Sbjct: 1528 FWWGVEKGKRK-THWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCAR 1586
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIP 3583
+LKAKYFPN + +D N S + K I+ G+ ++ W +G G + IW D W+P
Sbjct: 1587 VLKAKYFPNGSL--VDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLP 1644
Query: 3584 D--KRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLNTCF---DRDTIIKIKQIQIPLDN 3748
R P+ + G V DL+++ DET++N F D +TI I+ +
Sbjct: 1645 RDFSRRPITR--KGNCRLKWVSDLLSENGAWDETRVNQVFLPVDAETICSIR---VSSRQ 1699
Query: 3749 REDTTTWTLNRNGKFTV 3799
+D W +++GKF+V
Sbjct: 1700 EDDFVAWHPDKHGKFSV 1716
Score = 114 bits (285), Expect(5) = 2e-91
Identities = 51/131 (38%), Positives = 81/131 (61%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M + +N + I LIPK +P+ +FRPI LCN YK++SK + NR++P+L++++SP QSA
Sbjct: 1183 MPEGVNDTAIVLIPKIEQPMELRDFRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSA 1242
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+ GR ++DN +A E H +D+SK +DRV+W FL + K+GF+
Sbjct: 1243 FVLGRMITDNAILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFA 1302
Query: 2551 QKWYNIIIQCL 2583
+W I+ C+
Sbjct: 1303 HRWVRWIMVCI 1313
Score = 64.7 bits (156), Expect(5) = 2e-91
Identities = 38/119 (31%), Positives = 52/119 (43%)
Frame = +3
Query: 2583 TTILSIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVN 2762
T S+ NG+ F PSRGLRQGDPLSP+LFLF + LS + + KI
Sbjct: 1315 TVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQGALSPVKICR 1374
Query: 2763 HAPSASHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQLSKPKQVGCFL*PTHRPQ 2939
AP SH ++ + + D+ A+GQL P + + PQ
Sbjct: 1375 QAPGISHLLFADDTLLFFKADNVQAQAVKEVISDYASATGQLINPAKCSIMFGESSPPQ 1433
Score = 53.9 bits (128), Expect(5) = 2e-91
Identities = 35/130 (26%), Positives = 63/130 (48%)
Frame = +2
Query: 1514 LIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPS 1693
+I+++W+ S ++ L V L W++ N+ I+ +++L + ++
Sbjct: 958 VIDESWAASGDKSDLADISRALSQVMAKLHSWSRRKCKNVGREIEKGRKRLAELIESGAD 1017
Query: 1694 NIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTL 1873
+ R + HEL Y+ +E W +S+ + GDRNT +FH A R ++NRI L
Sbjct: 1018 STSIRSASDNLHELL--YR-EEMLWLQRSRVNWLKEGDRNTRFFHSKAVWRAKKNRITKL 1074
Query: 1874 SDGNGNWLHS 1903
D G +HS
Sbjct: 1075 KDREGT-VHS 1083
Score = 33.9 bits (76), Expect(5) = 2e-91
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 1914 ISDCLTKHFQHISTTVSPTIDENLIG-LIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
+ D T++F+ + + P +D++ + LI ++ + N L + EI N +F + P
Sbjct: 1088 LEDMATEYFKEVFSA-DPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPL 1146
Query: 2091 KXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
K QR+W + +D+V+ ++ FF
Sbjct: 1147 KALGPDGFPARFYQRHWGFMKNDIVRAVKLFF 1178
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 170 bits (431), Expect(4) = e-104
Identities = 101/363 (27%), Positives = 169/363 (46%), Gaps = 14/363 (3%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F+ + + + +++ W +L+ G+ ++IK V ++ +Y M F+LP+ +C+DL + R+
Sbjct: 1162 FQSLRERIWKKILQWGENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRN 1221
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG K + K W S +KS + GGLGF++I LFN A++A+ WRL +NP SLCA
Sbjct: 1222 FWWGAEKGKRK-THWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCAR 1280
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIP 3583
+LKAKY+PN ++ + W + I+ G+ ++ W +G G + +W D W+P
Sbjct: 1281 VLKAKYYPNGSIVDTSFGGNASPGW--QAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLP 1338
Query: 3584 DKRHPLLKPSTGTYN--FNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNRED 3757
R +P T N V DL+ D K+N F + I +++ + ED
Sbjct: 1339 --RDLSRRPITPKNNCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILKLRTSSRDEED 1396
Query: 3758 TTTWTLNRNGKFTV-----------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWK 3904
W ++ G F+V ++W V +K+FTW+
Sbjct: 1397 FIAWHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWR 1456
Query: 3905 MAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDY-VKN 4081
+ LP I+ TC++C E H A +W + S D ++
Sbjct: 1457 ATSNCLPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRM 1516
Query: 4082 DSH 4090
D H
Sbjct: 1517 DDH 1519
Score = 135 bits (341), Expect(4) = e-104
Identities = 95/388 (24%), Positives = 171/388 (44%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
++WN +G+GN + + L L+ + +FL ET+Q ++ + ++ ++ + V
Sbjct: 465 LSWNCRGIGNATTVQE---LCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 521
Query: 923 PVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQ 1102
G +GGL L W +V++ I++ E I+A I + W + YG P + W
Sbjct: 522 SDGMSGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMWS 581
Query: 1103 MIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYP 1282
++ + W+++G N L++ E SR + + F D+L++ HDLG SG P
Sbjct: 582 LLNSIKQSSNLSWLVIGDFNEALWQFEHFSRKPRSDAQMQAFRDVLDTCELHDLGISGLP 641
Query: 1283 FTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGA 1462
T++NRR G + + RLDR + ++ W + + + HL S+H PI L H + D
Sbjct: 642 HTYDNRRGGWNNVKVRLDRALADDEWRDLFSQYQVQHLVSPCSNHCPIVLKLHGSVPD-- 699
Query: 1463 KPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINTN 1642
+ W+K+ Y NI
Sbjct: 700 ----------------------------------------------QSWSKKKYKNIGRE 713
Query: 1643 IQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTHY 1822
++ ++KL + + R+ + +EL Y+ +E W +S+ + GDRNT +
Sbjct: 714 LEKTRKKLSNLLEAGTDKAAIRQTSDYMNELL--YR-EEMLWLQRSRVNWLKEGDRNTKF 770
Query: 1823 FHDSARIRYRRNRIDTLSDGNGNWLHSK 1906
FH+ R ++N+I L D G + SK
Sbjct: 771 FHNRVAWRAKKNKITKLRDAAGTFHRSK 798
Score = 112 bits (281), Expect(4) = e-104
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
ML+ +N + I LIPK +P +FRPI LCN YK++SK + NR++P L+++IS QSA
Sbjct: 896 MLEGVNDTAIVLIPKIEQPRDLRDFRPISLCNVIYKVLSKCLVNRLRPFLDELISKNQSA 955
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+P R ++DN +A E H +D+SK +DRV+W FL + K GFS
Sbjct: 956 FVPRRMITDNALLAFECFHFIQRNKNPRSAACAYKLDLSKAYDRVDWRFLEQSMYKWGFS 1015
Query: 2551 QKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHMLKT 2730
W + ++ C+ C D + P L + + LE + +
Sbjct: 1016 HCWVSWVMTCISTVC---------DKGTRCD------PFLFLFVADGLSLLLEE-KVEQG 1059
Query: 2731 SISFMATKLSIMHLLPVIYYLQMT----AFFSVMLLLMQVKTLSEFSRISVKLLAN*VNL 2898
+IS + + H P I +L FF L Q + + E +N
Sbjct: 1060 AIS----PIRVCHQAPGISHLLFADDTLLFFKADL--SQSQAIKEVFGSYATSTGQLINP 1113
Query: 2899 SKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSP 3012
+K + F + I + L + +DKYLG P
Sbjct: 1114 TKCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLP 1151
Score = 34.7 bits (78), Expect(4) = e-104
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 1929 TKHFQHISTTVSPTIDENLIG-LIPTCINNSENALLETIPFYTEIKNILFNMEPNKXXXX 2105
T++F+ + T P +D + + LI + N L + EI N LF + P K
Sbjct: 806 TQYFKDMFTA-DPNLDHSPVTRLIQPKVTEEMNNRLCSEFSEDEIANALFQIGPLKAPGT 864
Query: 2106 XXXXXXXXQRNWETISSDLVQMIQTFF 2186
QRNW I +D+V+ ++ FF
Sbjct: 865 DGFLARFYQRNWGCIKNDIVRAVKEFF 891
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 170 bits (431), Expect(4) = e-104
Identities = 101/363 (27%), Positives = 169/363 (46%), Gaps = 14/363 (3%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F+ + + + +++ W +L+ G+ ++IK V ++ +Y M F+LP+ +C+DL + R+
Sbjct: 1134 FQSLRERIWKKILQWGENYLSSGGKEVLIKAVIQAIPVYVMGIFKLPESVCEDLTSLTRN 1193
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
FWWG K + K W S +KS + GGLGF++I LFN A++A+ WRL +NP SLCA
Sbjct: 1194 FWWGAEKGKRK-THWKAWKSLTKSKSLGGLGFKDIRLFNQALLARQAWRLIDNPDSLCAR 1252
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIP 3583
+LKAKY+PN ++ + W + I+ G+ ++ W +G G + +W D W+P
Sbjct: 1253 VLKAKYYPNGSIVDTSFGGNASPGW--QAIEHGLELVKKGIIWRIGNGRSVRVWQDPWLP 1310
Query: 3584 DKRHPLLKPSTGTYN--FNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNRED 3757
R +P T N V DL+ D K+N F + I +++ + ED
Sbjct: 1311 --RDLSRRPITPKNNCRIKWVADLMLDNGMWDANKINQIFLPVDVEIILKLRTSSRDEED 1368
Query: 3758 TTTWTLNRNGKFTV-----------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWK 3904
W ++ G F+V ++W V +K+FTW+
Sbjct: 1369 FIAWHPDKLGNFSVRTAYRLAENWAKEEASSSSSDVNIRKAWELLWKCNVPSKVKIFTWR 1428
Query: 3905 MAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDY-VKN 4081
+ LP I+ TC++C E H A +W + S D ++
Sbjct: 1429 ATSNCLPTWDNKKKRNLEISDTCVICGMEKEDTMHALCRCPQAKHLWLAMKESNDLSLRM 1488
Query: 4082 DSH 4090
D H
Sbjct: 1489 DDH 1491
Score = 135 bits (341), Expect(4) = e-104
Identities = 95/388 (24%), Positives = 171/388 (44%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
++WN +G+GN + + L L+ + +FL ET+Q ++ + ++ ++ + V
Sbjct: 437 LSWNCRGIGNATTVQE---LCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVS 493
Query: 923 PVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQ 1102
G +GGL L W +V++ I++ E I+A I + W + YG P + W
Sbjct: 494 SDGMSGGLALFWHESVHVEILNKNERFIDAYIRLSPNDPLWHATFVYGEPRVENRHKMWS 553
Query: 1103 MIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYP 1282
++ + W+++G N L++ E SR + + F D+L++ HDLG SG P
Sbjct: 554 LLNSIKQSSNLSWLVIGDFNEALWQFEHFSRKPRSDAQMQAFRDVLDTCELHDLGISGLP 613
Query: 1283 FTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGA 1462
T++NRR G + + RLDR + ++ W + + + HL S+H PI L H + D
Sbjct: 614 HTYDNRRGGWNNVKVRLDRALADDEWRDLFSQYQVQHLVSPCSNHCPIVLKLHGSVPD-- 671
Query: 1463 KPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINTN 1642
+ W+K+ Y NI
Sbjct: 672 ----------------------------------------------QSWSKKKYKNIGRE 685
Query: 1643 IQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTHY 1822
++ ++KL + + R+ + +EL Y+ +E W +S+ + GDRNT +
Sbjct: 686 LEKTRKKLSNLLEAGTDKAAIRQTSDYMNELL--YR-EEMLWLQRSRVNWLKEGDRNTKF 742
Query: 1823 FHDSARIRYRRNRIDTLSDGNGNWLHSK 1906
FH+ R ++N+I L D G + SK
Sbjct: 743 FHNRVAWRAKKNKITKLRDAAGTFHRSK 770
Score = 112 bits (281), Expect(4) = e-104
Identities = 80/278 (28%), Positives = 124/278 (44%), Gaps = 4/278 (1%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
ML+ +N + I LIPK +P +FRPI LCN YK++SK + NR++P L+++IS QSA
Sbjct: 868 MLEGVNDTAIVLIPKIEQPRDLRDFRPISLCNVIYKVLSKCLVNRLRPFLDELISKNQSA 927
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+P R ++DN +A E H +D+SK +DRV+W FL + K GFS
Sbjct: 928 FVPRRMITDNALLAFECFHFIQRNKNPRSAACAYKLDLSKAYDRVDWRFLEQSMYKWGFS 987
Query: 2551 QKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHMLKT 2730
W + ++ C+ C D + P L + + LE + +
Sbjct: 988 HCWVSWVMTCISTVC---------DKGTRCD------PFLFLFVADGLSLLLEE-KVEQG 1031
Query: 2731 SISFMATKLSIMHLLPVIYYLQMT----AFFSVMLLLMQVKTLSEFSRISVKLLAN*VNL 2898
+IS + + H P I +L FF L Q + + E +N
Sbjct: 1032 AIS----PIRVCHQAPGISHLLFADDTLLFFKADL--SQSQAIKEVFGSYATSTGQLINP 1085
Query: 2899 SKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSP 3012
+K + F + I + L + +DKYLG P
Sbjct: 1086 TKCSILFGNSLPIASRDAITNCLQIASTEFEDKYLGLP 1123
Score = 34.7 bits (78), Expect(4) = e-104
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +3
Query: 1929 TKHFQHISTTVSPTIDENLIG-LIPTCINNSENALLETIPFYTEIKNILFNMEPNKXXXX 2105
T++F+ + T P +D + + LI + N L + EI N LF + P K
Sbjct: 778 TQYFKDMFTA-DPNLDHSPVTRLIQPKVTEEMNNRLCSEFSEDEIANALFQIGPLKAPGT 836
Query: 2106 XXXXXXXXQRNWETISSDLVQMIQTFF 2186
QRNW I +D+V+ ++ FF
Sbjct: 837 DGFLARFYQRNWGCIKNDIVRAVKEFF 863
>gb|EPS63383.1| hypothetical protein M569_11401 [Genlisea aurea]
Length = 1469
Score = 186 bits (471), Expect(4) = e-104
Identities = 117/390 (30%), Positives = 194/390 (49%), Gaps = 5/390 (1%)
Frame = +2
Query: 743 IAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVP 922
+AWN +GL + S L D+++ + P ++FLSETK +VE + ++ V
Sbjct: 372 LAWNCRGLRSAS---TVRRLRDVISSDAPSMIFLSETKCLASHVEWLKECLSYFGV-AVS 427
Query: 923 PVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQ 1102
G +GGL L W+ +V ++++ +C + I+ + T W + FYG+P L+ SW
Sbjct: 428 ATGLSGGLALFWRKDVCVSLLSFCSSYIDVLVRLTPTLPEWRFTGFYGNPAVQLRPRSWD 487
Query: 1103 MIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYP 1282
++R + PW++ G N V+ +NE +S + F D L D+GF+G+P
Sbjct: 488 LLRQIRHHSICPWLVAGDFNEVVMQNEVESLNSRPASQMRAFRDALLDCQLQDIGFTGFP 547
Query: 1283 FTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGA 1462
FTW N+R PD RLDR + W N +P + + HLP SDH+P+ +
Sbjct: 548 FTWCNKRKAPDTVRARLDRAVATTTWNNLFPRAIVKHLPYGSSDHLPLLIFLDPAAPTSI 607
Query: 1463 KP----FKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGN 1630
+P FK+ P C +I ++W+ S F R+ + L KW + G
Sbjct: 608 RPNKRRFKFEAFWTTIPGCADVIHQSWA---PNSQPTNFNYRIQKTRMSLLKWYQSKVGP 664
Query: 1631 INTNIQNCKEKLD-DANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGD 1807
I + +Q +LD A +++ +IK E A + E + +K +E +WK + K + GD
Sbjct: 665 IKSRLQKIATELDLLARQSITDDIKHCESA-LKEEQASLWKQEEMYWKQRGKIHWLRCGD 723
Query: 1808 RNTHYFHDSARIRYRRNRIDTLSDGNGNWL 1897
RNT +FH SA + +NRI + + +G W+
Sbjct: 724 RNTAFFHASASEKRTQNRIAGIKNAHGLWI 753
Score = 130 bits (327), Expect(4) = e-104
Identities = 85/343 (24%), Positives = 148/343 (43%), Gaps = 20/343 (5%)
Frame = +2
Query: 3032 KLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNK 3211
K F + ++ R++ W L+ G+ ++IK V S+ Y M CF++P + ++LN
Sbjct: 1137 KKAAFRSLKDRIQGRILHWHTKFLSKAGKMVLIKSVLQSIPSYTMQCFKIPTTLIRELNS 1196
Query: 3212 IQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTS 3391
+ FWW + ++L WD ++ GGLGF+N+T FN A++AK WR+
Sbjct: 1197 LFSQFWWSDRGHSK--MHLLAWDKLCEAPVQGGLGFRNLTTFNQALLAKQCWRIFTKDDL 1254
Query: 3392 LCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTD 3571
L + +L+ KY+ NT L+ +L +N S+ + + + + + W G G IN+W
Sbjct: 1255 LLSRVLQGKYYKNTS--FLEARLGRNPSFTWRSLLTAKNLLLSGLRWRPGDGVHINVWNS 1312
Query: 3572 FWIPDK-------RHPLLKPSTGTYNFNQVCDLIT-QAKTLDETKLNTCFDRDTIIKIKQ 3727
W+P R+P L P +V DLI+ + + + F I
Sbjct: 1313 PWLPRAGSFKPMFRNPALSPHL------RVSDLISPDTCDWNRSYIQQVFLPADAATILS 1366
Query: 3728 IQIPLDNREDTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXM------------IWNMK 3871
I + D W +R G +TV +W +
Sbjct: 1367 IPLGSSGHHDRMIWHYSREGTYTVKSGYLHARSIESNRNPGPAHSNPEISAFWKHLWKVA 1426
Query: 3872 VSPSIKLFTWKMAHSILPNSMRVDAILPYINTTCLLCNEHDES 4000
+ P I LF W++ ILP + ++ C +C++H+E+
Sbjct: 1427 LPPKIILFGWRLCKGILPTKDLLFHRKICPDSLCEICHQHEET 1469
Score = 111 bits (278), Expect(4) = e-104
Identities = 93/301 (30%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M ++N S I LIPK + P +RPI L N +YKI SK++ANR+KP++ +I+S Q+A
Sbjct: 856 MEPQLNHSHIVLIPKKSNPQEPAHYRPISLSNVAYKIASKMVANRLKPIMERIVSKEQAA 915
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGF- 2547
F+ GR ++DNI +A+EL H +D+SK FDR+EW FL ++ R+ GF
Sbjct: 916 FLSGRSITDNILLAYELNHSIKLARRQSKRYGALKLDVSKAFDRLEWPFLEQVLRRHGFP 975
Query: 2548 -----------SQKWYNIIIQCLP-----PSCL*C*MDPLADSSNLLEVLGREIPCLLTY 2679
S Y+I+I P P+ DP++ +L C T
Sbjct: 976 ASTTDTIMRLVSSATYSILINGSPEGHIVPTRGIRQGDPMSPYLFIL--------CSDTL 1027
Query: 2680 SSFAWKHYLEPFHMLKTSISFMATKLSIMHLLPVIYYLQMTAFFSVMLLLMQV---KTLS 2850
S + E H I T I HLL + T FS L L+
Sbjct: 1028 SRLL---HEEGAHNPDLGIQLSPTVPKISHLL----FADDTLIFSAATLTAMEGIRSVLT 1080
Query: 2851 EFSRISVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRS 3030
++ IS +L +NL KS + DP+ + + + + V KYLG P S
Sbjct: 1081 RYAAISGQL----INLEKSALSVPSEADPHYRQLLSTAVGVPLTDSLGKYLGLPSMIGIS 1136
Query: 3031 K 3033
K
Sbjct: 1137 K 1137
Score = 24.3 bits (51), Expect(4) = e-104
Identities = 16/75 (21%), Positives = 28/75 (37%)
Frame = +3
Query: 1950 STTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPNKXXXXXXXXXXXX 2129
S+ P E + +IP I + A+LE E+ + M+P
Sbjct: 773 SSPPDPIEMERALSIIPRTITDDMRAILERPYNAAEVWPAVRRMKPLSSPGPDGFPPVFY 832
Query: 2130 QRNWETISSDLVQMI 2174
Q+ W T+ V+ +
Sbjct: 833 QKYWPTVGQATVEAV 847
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 149 bits (375), Expect(4) = e-103
Identities = 102/381 (26%), Positives = 173/381 (45%), Gaps = 9/381 (2%)
Frame = +2
Query: 749 WNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYWIVPPV 928
WN +G + E C+ D + N IL L ETK Q+ ++ + ++ +P +
Sbjct: 6 WNVRGGCRKNVMEECS---DFCKNNNIKILMLCETKSQSPPSQLAVSAAGFLHHDSIPAM 62
Query: 929 GSAGGLILAWK----NNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSS 1096
G +GGL L W+ N +L +I I I N ++ Y + K S
Sbjct: 63 GYSGGLWLFWRDCILNPFSLVVIYKSVRFIACSINLLNQNLQFVAIFIYAPAQKEFKSSF 122
Query: 1097 WQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSG 1276
W + + ++ P+IILG N + ++K F+ A ++ + + ++ F+G
Sbjct: 123 WDELIAYVSSLSFPFIILGDFNEINSPSDKLGGAPFSSSRAYYMQNLFSQVDCTEISFTG 182
Query: 1277 YPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWND 1456
FTW ++ GP+ +RLDRG+ + +WL +P + + H SDH ISL
Sbjct: 183 QIFTWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYLANNKS 242
Query: 1457 GAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNIN 1636
A PF++ L+++ W GS F F ++ VK + ++WNK +GNI
Sbjct: 243 KAPPFRFEKMWCTRKDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQFGNIF 302
Query: 1637 TNIQNCKEKLDDANKNLPSNIKSRELAKITHEL-----TNWYKIKEEFWKIKSKEQHIAL 1801
++ E+L++ +NL + + L K EL + +WK K K + L
Sbjct: 303 RQLRQVDERLEEIQRNLLIDHNNTSL-KTQQELFLAKRNKLLEYNTTYWKQKCKSDFMVL 361
Query: 1802 GDRNTHYFHDSARIRYRRNRI 1864
GD N+ ++H A IR RN+I
Sbjct: 362 GDTNSKFYHTHASIRKYRNQI 382
Score = 134 bits (338), Expect(4) = e-103
Identities = 98/392 (25%), Positives = 168/392 (42%), Gaps = 8/392 (2%)
Frame = +2
Query: 3074 RLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRDFWWGKHIDTP 3253
+L WK L+ GRT++I+ +S + +QM F LPKK+ L+ R+F+W K
Sbjct: 791 QLPKWKANSLSQAGRTVLIQSNLASKASFQMQSFTLPKKVLTTLDTTYRNFFWNKD-PAA 849
Query: 3254 KGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCASLLKAKYFPNT 3433
K GW+ + + GG+GF+ + N A+ K+ W++ + ++ L+ KY
Sbjct: 850 KSANFIGWNKICQPKSVGGVGFRKAEVTNIALQMKLLWKIMVSKDNIWVKLVTQKYLKEQ 909
Query: 3434 DVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIPDKRHPL---L 3604
++ L K+ N SW K + W++G G I+ WTD WI ++PL
Sbjct: 910 NL--LVCKIPSNASWQWKNLLRHRNFFSKGLRWLIGDGQDISFWTDNWI--FQYPLNSKY 965
Query: 3605 KPSTGTYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNREDTTTWTLNRN 3784
P+ G+ N +V + D KL T + + I + IP +++D W L
Sbjct: 966 VPTVGSENI-KVAECFNGLGGWDIPKLLTLVPPNIVKAISSVFIPSSSQQDRLLWGLTPT 1024
Query: 3785 GKFTV---XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKMAHSILPNSMRVDAILP 3955
G+++V IW + P IK F WK + L + R++
Sbjct: 1025 GQYSVKSGASLIREVNGGTIEKVEFNWIWGIHAPPKIKNFLWKACNDGLATTSRLERSHI 1084
Query: 3956 YINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDYVKNDSHTCHDWINSWCTLSER 4135
++ C C+ E++ HL F +++HL + S ++S+ ++ E
Sbjct: 1085 FVPQNCCFCDCPSETICHLCFQCPFTLDIYSHLEDKFQWPAYPSWFSTLQLSSFRSVLEA 1144
Query: 4136 NGIKMGRAELR--STVTWHFWKARCGKVFEKK 4225
I + L S V WH W R +F +
Sbjct: 1145 CHINLTLEYLTKLSIVWWHVWYFRNKLIFNNE 1176
Score = 126 bits (316), Expect(4) = e-103
Identities = 99/313 (31%), Positives = 144/313 (46%), Gaps = 25/313 (7%)
Frame = +1
Query: 2164 CK*FKLFSH---MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKP 2334
C+ + F H MLKE+N +F++LIPK KP+ A FRPI LC+T YK+ISK+I NR+K
Sbjct: 484 CRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIITNRLKI 543
Query: 2335 LLNQIISPYQSAFIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWN 2514
L +II P Q AFIP R + DNI +AHE+ H +DM K +DR+EW
Sbjct: 544 TLGKIIHPLQGAFIPERLIQDNILIAHEVFH-SFKNKTGRGGWIAIKLDMEKAYDRLEWK 602
Query: 2515 FLIKITRKMGFSQKWYNIIIQCLPPSCL*C*M-----------------DPLADSSNLL- 2640
++ KMGFS W I C+ + + DPL+ +L
Sbjct: 603 YIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFILC 662
Query: 2641 -EVLGREIPCLLTYSSFAWKHYLEPFHMLKTSISFMATKLSIMHLLPVIYYLQMTAFFSV 2817
E+L RE K EP ++ I T+ +P + + T F+
Sbjct: 663 AELLAREFS----------KACHEPGKLIGVPIGRTRTR------IPFLTFADDTMIFAK 706
Query: 2818 MLLLMQVK---TLSEFSRISVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISL 2988
K L ++ +S +L VN KS SP++ + + SIL ++ S
Sbjct: 707 ATEASCHKIRQILDKYCLMSGQL----VNYHKSAFQCSPNVRDIDKVNFASILGMQESSE 762
Query: 2989 DDKYLGSPLFTNR 3027
YLG P+ +R
Sbjct: 763 LGDYLGCPIINSR 775
Score = 39.3 bits (90), Expect(4) = e-103
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +3
Query: 1899 ILKKDISDCLTKHF-QHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILF 2075
+++K+I+ K F + + + +D NL+ I ++ ++NA L + EIKN +F
Sbjct: 398 LIEKEITLAFKKRFISNPACKFNQNVDFNLLSPI---VSEADNAYLTSAVSPEEIKNAVF 454
Query: 2076 NMEPNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
++ P+K Q+ W I + + +Q FF
Sbjct: 455 DLAPDKSPGPDGFPPYFFQKYWTLIGKSVCRAVQAFF 491
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 147 bits (371), Expect(4) = e-103
Identities = 92/354 (25%), Positives = 161/354 (45%), Gaps = 19/354 (5%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F + + + ++ GWK L+ G+ I++K V ++ IY MNCF +PK +C ++ ++
Sbjct: 1128 FNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYMMNCFLIPKCLCNEIQQVMAR 1187
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
+WW + D + ++ W+ +GGLGF+N+ FN A++AK WRL + P SL A
Sbjct: 1188 YWWVEQ-DGQRKIHWLSWNKLCLPKQEGGLGFRNLYAFNMALLAKQLWRLIQTPNSLVAC 1246
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIP 3583
+LKA+YF N + L+ ++ + S+I + + I+ S W +G G + IW D W+P
Sbjct: 1247 ILKARYFKNCSI--LEAQIGHSPSYIWQSLCKARVLIEKGSRWRIGNGHSVRIWGDRWLP 1304
Query: 3584 D-KRHPLLKPSTGTYNFNQVCDLITQAKTLD--ETKLNTCFDRDTIIKIKQIQIPLDNRE 3754
+ + + P + +V LI TL E L F + + I+ I + +
Sbjct: 1305 NSESFQVSSPQVEGFEEAKVNSLINPV-TLQWKEDLLQAWFSAEEVNCIRNIPLSFRHPP 1363
Query: 3755 DTTTWTLNRNGKFTV----------------XXXXXXXXXXXXXXXXXXMIWNMKVSPSI 3886
D W R+G++TV IW +V P +
Sbjct: 1364 DILIWHFERDGQYTVRSGHDVARRVLLQQDGDDTNMNGGPIVACEQVWKKIWKARVPPKV 1423
Query: 3887 KLFTWKMAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWN 4048
++F W+ +ILP + C+ C +E++ H+ L A W+
Sbjct: 1424 RIFIWRALLNILPTKDNLIHRRISELRGCVFCGA-EETVAHVLLRCPMAIASWS 1476
Score = 136 bits (342), Expect(4) = e-103
Identities = 87/322 (27%), Positives = 144/322 (44%)
Frame = +2
Query: 929 GSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSSWQMI 1108
G++GGL L W + +T + N I+ + W + FYG P + SW ++
Sbjct: 448 GASGGLCLMWTEELVVTARSFGTNHIDTEVEILGVRGKWRFTGFYGCPVTAERHRSWDLL 507
Query: 1109 RGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSGYPFT 1288
R + PW+ G N +L +EK + +++ DLG++G +T
Sbjct: 508 RRLGATNYLPWLCCGDFNEILRADEKLA---------------IDTCRFKDLGYTGPKYT 552
Query: 1289 WNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWNDGAKP 1468
W R P RLDR + W + + + + HL P SDH+P+ K
Sbjct: 553 W--WRNNPMEIRIRLDRALATADWCSRFLGTKVIHLNPTKSDHLPLK-----------KL 599
Query: 1469 FKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNINTNIQ 1648
F++ +H C + I+ W GS F T++L +H L W+K +G++ I+
Sbjct: 600 FRFEEMWAEHVNCMQTIQDGWQRTCRGSAPFTTTEKLKCTRHKLLGWSKCNFGHLPNQIK 659
Query: 1649 NCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDRNTHYFH 1828
+EKL + PS+ + +T +L + E +W+ S+ + GDRN+ +FH
Sbjct: 660 ITREKLGELLDAPPSHHTAELRNALTKQLDSLMAKNEVYWRQCSRATWLKAGDRNSKFFH 719
Query: 1829 DSARIRYRRNRIDTLSDGNGNW 1894
A R RRN I L D +G+W
Sbjct: 720 YKASSRRRRNTISALEDEHGHW 741
Score = 129 bits (325), Expect(4) = e-103
Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 14/295 (4%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
+LK IN + ++LIPK +P + RPI LCN YKI +K++ R+K +L +IS QSA
Sbjct: 843 LLKRINFTHVALIPKVHEPKNMMQLRPISLCNVLYKIGAKVLTTRLKAILPTLISDTQSA 902
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+PGR +SDN VA EL+H IDMSK +DRVEW+FL + + MGF+
Sbjct: 903 FVPGRAISDNSIVAFELLHMMHKKNQGRQGYLALKIDMSKAYDRVEWSFLEALMKGMGFA 962
Query: 2551 QKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHML-- 2724
+W +I++C + S + G + ++ L P+ L
Sbjct: 963 PRWIQLIMEC------------VTTVSYSFMLNGNPVGYVIPQRGLRQGDPLSPYLFLLC 1010
Query: 2725 ---KTSISFMATKLSIMHLL------PVIYYLQMTAFFSVMLLLMQVKTLSEFSRISVK- 2874
+S+ A + +++H + P + +L A S + L + + S I K
Sbjct: 1011 AEALSSLILQAERRNLLHGVNLCRGAPSVSHL-FFADDSFLFLRADQQDCEQLSIIFQKY 1069
Query: 2875 --LLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSK 3033
+ ++L KS V FS ++D + ++ ++L V+ + D YLG P RS+
Sbjct: 1070 EMVSGQKIHLEKSCVSFSINMDRTDQDNLAAVLGVRRVDQHDVYLGLPTHVGRSR 1124
Score = 34.3 bits (77), Expect(4) = e-103
Identities = 19/94 (20%), Positives = 39/94 (41%)
Frame = +3
Query: 1905 KKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNME 2084
++ ++ + +FQH+ ++ + ++ + + N L + EIK LF M
Sbjct: 745 EQGLTQTVVNYFQHLFSSTGSSEYTEVVDGVRGRVTEEMNQALLAVFTPEEIKIALFQMH 804
Query: 2085 PNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
P+K Q+ W + D+V + FF
Sbjct: 805 PSKAPGPDGFSPFFYQKYWPIVGEDVVAAVLHFF 838
>ref|XP_007017131.1| Uncharacterized protein TCM_033752 [Theobroma cacao]
gi|508722459|gb|EOY14356.1| Uncharacterized protein
TCM_033752 [Theobroma cacao]
Length = 2251
Score = 130 bits (326), Expect(5) = 1e-98
Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 3/275 (1%)
Frame = +2
Query: 1097 WQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSG 1276
W +R +A EPW++ G N++L E+ ++ ++F +L G D GF G
Sbjct: 1001 WDCLRRLAADNEEPWLVGGDFNIILKREERLYGSAPHEGSMEDFASVLLDCGLLDGGFEG 1060
Query: 1277 YPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWND 1456
PFTW N R+ QRLDR + N+ W+N +P + I HL SDH P+ ++ ++
Sbjct: 1061 NPFTWTNNRMF-----QRLDRVVYNHQWINMFPITRIQHLNRDGSDHCPLLISCFISSEK 1115
Query: 1457 GAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGNIN 1636
F++ + H + +E W++ I+GS F + +K L+ WNK ++G+I
Sbjct: 1116 SPSSFRFQHAWVLHHDFKTSVEGNWNLPINGSGLQAFWIKQHRLKQHLKWWNKAVFGDIF 1175
Query: 1637 TNIQNCKEKLDDAN--KNLPSNIKSR-ELAKITHELTNWYKIKEEFWKIKSKEQHIALGD 1807
+ ++ ++++++ + SR L K +L ++E FWK KS + + G+
Sbjct: 1176 SKLKEAEKRVEECEILHQQEQTVGSRINLNKSYAQLNKQLNVEEIFWKQKSGVKWVVEGE 1235
Query: 1808 RNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSKKR 1912
RNT +FH + + R+ I + + +G W+ +++
Sbjct: 1236 RNTKFFHMRMQKKRIRSHIFKVQEPDGRWIEDQEQ 1270
Score = 128 bits (322), Expect(5) = 1e-98
Identities = 88/359 (24%), Positives = 160/359 (44%), Gaps = 1/359 (0%)
Frame = +2
Query: 3044 FEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRD 3223
F ++ ++ R+ GW+N L+P GR +++ V +S+ IY + + P + + +N++
Sbjct: 1648 FNDLVAKIEERITGWENKILSPGGRITLLRSVLASLPIYLLQVLKPPVCVLERVNRLFNS 1707
Query: 3224 FWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCAS 3403
F WG K ++ W + +T+GGL +++ A K+ WR SL
Sbjct: 1708 FLWGGSA-ASKRIHWASWAKIALPVTEGGLDIRSLAEVFEAFSMKLWWRF-RTTDSLWTR 1765
Query: 3404 LLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIP 3583
++ KY M PKL + +W K + + + H W VG+G+ + W D W+
Sbjct: 1766 FMRMKYCRGQLPMQTQPKLHDSQTW--KRMLTSSTITEQHMRWRVGQGN-VFFWHDCWMG 1822
Query: 3584 DKRHPLLKPSTG-TYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNREDT 3760
+ PL+ + T + QVCD T + + KL T ++ + +I +I I N+ D
Sbjct: 1823 EA--PLISSNQEFTSSMVQVCDFFTN-NSWNIEKLKTVLQQEVVDEIAKIPIDTMNK-DE 1878
Query: 3761 TTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKMAHSILPNSMRV 3940
WT NG F+ IW+ V + F W++ H +P +++
Sbjct: 1879 AYWTPTPNGDFSTKSAWQLIRKRKVVNPVFNFIWHKTVPLTTSFFLWRLLHDWIPVELKM 1938
Query: 3941 DAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWNHLNFSMDYVKNDSHTCHDWINSW 4117
+ + + C C + +ES+ H+ D A QVWN+ + + T + I +W
Sbjct: 1939 KSKGLQLASRCRCC-KSEESIMHVMWDNPVAMQVWNYFAKLFQILIINPCTINQIIGAW 1996
Score = 98.2 bits (243), Expect(5) = 1e-98
Identities = 49/127 (38%), Positives = 77/127 (60%)
Frame = +1
Query: 2203 INSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAFIPG 2382
+ S+ + L+PK + +EFRPI LC KII+KL++NR+ +L II+ QS F+ G
Sbjct: 1370 VTSTTLVLLPKKSSASKWSEFRPISLCTVMNKIITKLLSNRLAKILPSIITENQSGFVGG 1429
Query: 2383 RKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQKWY 2562
R +SDNI +A ELI +DM K +DR++W+FLIK+ + GF+++W
Sbjct: 1430 RLISDNILLAQELIR--KLDTKSRGGNLALKLDMMKAYDRLDWSFLIKVLQHFGFNEQWI 1487
Query: 2563 NIIIQCL 2583
+I +C+
Sbjct: 1488 GMIQKCI 1494
Score = 50.4 bits (119), Expect(5) = 1e-98
Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Frame = +3
Query: 2595 SIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHG-----HKIV 2759
S++LNG G+FK RGLRQGD +SP LF+ E LSR +N ++ H
Sbjct: 1500 SLLLNGRIEGYFKSERGLRQGDSISPQLFILAAEYLSR------GLNALYDQYPSLHYSS 1553
Query: 2760 NHAPSASHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQLSKPKQVGCFL*PTHRP 2936
S SH + A + ++ +++ E SGQ Q CF+ T+ P
Sbjct: 1554 GVPLSVSHLAFADDVLIFTNGSKSALQRILVFLQEYEEISGQRIN-AQKSCFVTHTNIP 1611
Score = 47.4 bits (111), Expect(5) = 1e-98
Identities = 24/68 (35%), Positives = 37/68 (54%)
Frame = +3
Query: 1992 LIPTCINNSENALLETIPFYTEIKNILFNMEPNKXXXXXXXXXXXXQRNWETISSDLVQM 2171
LIP+ I+NSEN LL P E+K+ +F+++P Q+ W TI+ DL+
Sbjct: 1297 LIPSIISNSENELLCAEPNLQEVKDAVFDIDPESAAGPDGFSSYFYQQCWNTIAHDLLDA 1356
Query: 2172 IQTFFSHA 2195
++ FF A
Sbjct: 1357 VRDFFHGA 1364
>gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1100
Score = 142 bits (358), Expect(4) = 5e-96
Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 2/210 (0%)
Frame = +2
Query: 3029 LKLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLN 3208
+K F+ I + RL+ W HL G+ ++IK V ++ Y M+ F+LP C++
Sbjct: 877 MKADRFQSIKERFFKRLIDWAEKHLPMGGKEVLIKSVIQALPTYMMSVFKLPPSFCEEYM 936
Query: 3209 KIQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPT 3388
++ R FWWG+ K V+ W K + GG+GF+++ +FN A++A+ WRL + P
Sbjct: 937 QLVRKFWWGEDRSQRK-VHWASWQQLIKPKSMGGMGFKDMKIFNQALLARQAWRLVQFPD 995
Query: 3389 SLCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWT 3568
SLCA +LKAKY+PN D++ +DSW KGI G+ ++ W +G G K++IW
Sbjct: 996 SLCARVLKAKYYPNGDLLDTAFSSVSSDSW--KGIVHGLELLKKGVIWRIGTGRKVHIWR 1053
Query: 3569 DFWIPDKRHPL--LKPSTGTYNFNQVCDLI 3652
D W+P + H L + TGT V DL+
Sbjct: 1054 DDWLP-REHGLKVMGKKTGT-RLKWVSDLL 1081
Score = 134 bits (336), Expect(4) = 5e-96
Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 3/334 (0%)
Frame = +2
Query: 917 VPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFSS 1096
V VGS GGL L W + +L ++ Y I+ + + + W + YG P + +
Sbjct: 170 VDGVGSGGGLALFWDESFHLDLLSYTNRHIDVLVKEDRSAMQWRCTFVYGEPKAHERHNM 229
Query: 1097 WQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFSG 1276
W ++R + T PW ++G N +++ E S + + +F ++L+ DLGF G
Sbjct: 230 WTLLRRIKPNSTAPWCLMGDFNEAMWQFEHFSEHKRKEKQMLDFREILSHCDVFDLGFIG 289
Query: 1277 YPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTWND 1456
P+T++N+R G RLDR + + +W YP + + HL SDH PI L D
Sbjct: 290 TPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHLVSSRSDHCPI-LVQCTPDED 348
Query: 1457 GAKPFKYFGPRIDHPQCRRLIEK---AWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYG 1627
KP + I + L E+ AW H + + + +L V L+ W++E +G
Sbjct: 349 KDKPSRCMRYEILWEREESLSEEIRTAWEQHHAATDLGSVSSKLKLVMGALQHWSREKFG 408
Query: 1628 NINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGD 1807
++N + ++K+++ + +E + + +E W +S+ + GD
Sbjct: 409 SVNKELGALRKKMEELQLG-GRHTHDQEYQSCSRRMEEILYREEMMWLQRSRVAWLREGD 467
Query: 1808 RNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSKK 1909
RNT FH A R+R+N+I L +G+W +K
Sbjct: 468 RNTS-FHRKAAWRHRKNKISKLFLPDGSWTDQRK 500
Score = 113 bits (282), Expect(4) = 5e-96
Identities = 94/315 (29%), Positives = 143/315 (45%), Gaps = 22/315 (6%)
Frame = +1
Query: 2164 CK*FKLFSH---MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKP 2334
CK KLF M + +N++ I LIPK + +FRPI LCN YK+++K + N ++P
Sbjct: 585 CKAVKLFFDQKVMPEGVNTTAIVLIPKKKESKELKDFRPISLCNVIYKVVAKCLVNHLRP 644
Query: 2335 LLNQIISPYQSAFIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWN 2514
+L IIS QSAFIPGR ++DN +A E H +D++K +DRV+W
Sbjct: 645 ILESIISQEQSAFIPGRMITDNALIAFECFHNIAQSKRESQEFCAYKLDLAKAYDRVDWQ 704
Query: 2515 FLIKITRKMGFSQKWYNIIIQCL-----------------PPSCL*C*MDPLADSSNLLE 2643
+L + +MGFS W ++ C+ PS DPL S L
Sbjct: 705 YLEGVLDRMGFSNTWIQWMMACVTSVRYAVRFNGSMLKSFQPSRGLRQGDPL--SPYLFL 762
Query: 2644 VLGREIPCLLTYSSFAWKHYLEPFHMLKTSISFMATKLSIMHLLPVIYYLQMTAFF--SV 2817
+ + +L SS L P + + + I HLL + FF +V
Sbjct: 763 FVADGLSTIL--SSAVRTGDLVPLKVCRQA-------PGISHLL---FADDSLLFFKANV 810
Query: 2818 MLLLMQVKTLSEFSRISVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDK 2997
+ + L+ + R + +LL+ +K + F H + I S+L+V+ S +DK
Sbjct: 811 EQATVVKEALNLYERCTSQLLSP----AKCSMLFGKHCSDQTQPGIKSLLDVQQNSFEDK 866
Query: 2998 YLGSPLFTNRSKIKR 3042
YLG P R K R
Sbjct: 867 YLGLPTPEGRMKADR 881
Score = 35.4 bits (80), Expect(4) = 5e-96
Identities = 23/94 (24%), Positives = 39/94 (41%)
Frame = +3
Query: 1905 KKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNME 2084
+K++ T F+ + T + L+ LI + N L EI + LF +
Sbjct: 499 RKEMETMATNFFKDLYTKDPLVTPQPLLDLIMLKVTEQMNEDLCKAFSDKEISDALFQIG 558
Query: 2085 PNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFF 2186
P K QRNWE + +D+ + ++ FF
Sbjct: 559 PIKAPGPDGFPARFFQRNWEVLKNDVCKAVKLFF 592
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 186 bits (472), Expect(4) = 7e-95
Identities = 115/387 (29%), Positives = 197/387 (50%), Gaps = 2/387 (0%)
Frame = +2
Query: 734 IKTIAWNFQGLGNPSKPENCNSLNDLLNHENPDILFLSETKQQTKNVEIILRKINIQNYW 913
++ ++WN QG+GN + + L P+++FL ETK++ +E ++ + +
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYF---PEVIFLCETKKRRNYLENVVGHLGFFDLH 57
Query: 914 IVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKFS 1093
V P+G +GGL L WK++V + ++ + I+A ++ Q Y L+C YG P + +
Sbjct: 58 TVEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALLIWQDKEFY--LTCIYGEPVQAERGE 115
Query: 1094 SWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGFS 1273
W+ + + + PW++ G N ++ +EK + F MLNS G ++ S
Sbjct: 116 LWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHS 175
Query: 1274 GYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHV--T 1447
GY F+W R + + RLDR + N AW+ +P + T+L + SDH P+ +NN V
Sbjct: 176 GYQFSWYGNR-NDELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPL-INNLVGDN 233
Query: 1448 WNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYG 1627
W A FKY + + L+ WS + + A +++ + + ++ KW +
Sbjct: 234 WRKWAG-FKYDKRWVQREGFKDLLCNFWSQQSTKTNAL-MMEKIASCRREISKWKRVSKP 291
Query: 1628 NINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGD 1807
+ IQ + KLD A K +P + RELA++ EL+ Y +E+FW+ KS+ + GD
Sbjct: 292 SSAVRIQELQFKLDAATKQIPFD--RRELARLKKELSQEYNNEEQFWQEKSRIMWMRNGD 349
Query: 1808 RNTHYFHDSARIRYRRNRIDTLSDGNG 1888
RNT YFH + + R +NRI L D G
Sbjct: 350 RNTKYFHAATKNRRAQNRIQKLIDEEG 376
Score = 119 bits (298), Expect(4) = 7e-95
Identities = 58/127 (45%), Positives = 79/127 (62%)
Frame = +1
Query: 2203 INSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAFIPG 2382
+N + I LIPK K T+FRPI LCN YK+I KL+ANR+K +L +IS Q+AF+ G
Sbjct: 484 MNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKG 543
Query: 2383 RKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQKWY 2562
R +SDNI +AHEL+H D+SK +DRVEW FL K R +GF+ W
Sbjct: 544 RLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWI 603
Query: 2563 NIIIQCL 2583
+I++C+
Sbjct: 604 RLIMECV 610
Score = 79.7 bits (195), Expect(4) = 7e-95
Identities = 41/96 (42%), Positives = 54/96 (56%)
Frame = +3
Query: 2598 IMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVNHAPSA 2777
+++NG+P G PSRGLRQGDPLSPYLF+ C E L + + AE N I G K+ AP
Sbjct: 617 VLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPI 676
Query: 2778 SHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQ 2885
SH +A +IRI +++ ASGQ
Sbjct: 677 SHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQ 712
Score = 35.8 bits (81), Expect(4) = 7e-95
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +3
Query: 1950 STTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPNKXXXXXXXXXXXX 2129
S V T++E L L P + N LL I E++ F++ P+K
Sbjct: 399 SEDVGYTVEE-LENLTPLVSDQMNNNLLAPIT-KEEVQRATFSINPHKCPGPDGMNGFLY 456
Query: 2130 QRNWETISSDLVQMIQTFF 2186
Q+ WET+ + +M+Q FF
Sbjct: 457 QQFWETMGDQITEMVQAFF 475
Score = 139 bits (349), Expect = 2e-29
Identities = 93/349 (26%), Positives = 157/349 (44%), Gaps = 25/349 (7%)
Frame = +2
Query: 3074 RLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRDFWWGKHIDTP 3253
+++GW++ L+P G+ I++K V ++ Y M+CF++PK IC+ + + +FWW K+
Sbjct: 775 KVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAEFWW-KNKKEG 833
Query: 3254 KGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCASLLKAKYFPNT 3433
+G++ K W S+ GGLGF+ I FN A++ K WR+ SL A + K++YF +
Sbjct: 834 RGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKS 893
Query: 3434 DVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWI---PDKRHPLL 3604
D ++ + + +W K I I+ V+G G+ IN+WTD WI P K +
Sbjct: 894 DPLNAPLGSRPSFAW--KSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAKPAKAAQAV 951
Query: 3605 KPS--TGTYNFNQVCD----LITQAKTLDETKLNTCFDRDTIIKIKQIQIPLDNREDTTT 3766
K S Y N + L+ + + ++ F +T I ++ D T
Sbjct: 952 KRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFT 1011
Query: 3767 WTLNRNGKFTV------------XXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKMA 3910
W +R+G ++V IW + V P I F W+
Sbjct: 1012 WEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCV 1071
Query: 3911 HSILPNSMRVDAILPYIN----TTCLLCNEHDESLTHLFLDYNFACQVW 4045
+ N + V + L Y + +C+ C H E++ HL FA W
Sbjct: 1072 N----NCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTW 1116
>ref|XP_007046404.1| Uncharacterized protein TCM_011923 [Theobroma cacao]
gi|508710339|gb|EOY02236.1| Uncharacterized protein
TCM_011923 [Theobroma cacao]
Length = 1954
Score = 130 bits (328), Expect(5) = 1e-93
Identities = 86/340 (25%), Positives = 155/340 (45%), Gaps = 1/340 (0%)
Frame = +2
Query: 3032 KLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNK 3211
K+ F+ ++ ++ R+ GW+N L+P GR +++ V SS+ +Y + + P + + + +
Sbjct: 1347 KVTLFDSLITKIRDRISGWENKTLSPGGRITLLRSVLSSLPLYLLQVLKPPVVVIEKIER 1406
Query: 3212 IQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTS 3391
+ F WG + K ++ W + ++GGL + +T A K+ WR +
Sbjct: 1407 LFNSFLWGDSTN-DKRIHWAAWHKLTFPCSEGGLDIRRLTDMFDAFSLKLWWRFS-TCEG 1464
Query: 3392 LCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTD 3571
L LK KY ++ PKL + W K + G ++ W +GKG + W D
Sbjct: 1465 LWTKFLKTKYCMGQIPHYVHPKLHDSQVW--KRMVRGREVAIQNTRWRIGKG-SLFFWHD 1521
Query: 3572 FWIPDKRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLNTCFDRDTIIKIKQIQIPLD-N 3748
W+ D+ PL+ N D KLN + + +I +QIP+D +
Sbjct: 1522 CWMGDQ--PLVTSFPHFRNDMSTVHNFFNGHNWDVDKLNLYLPMNLVDEI--LQIPIDRS 1577
Query: 3749 REDTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXMIWNMKVSPSIKLFTWKMAHSILPN 3928
++D W+L NG+F+ ++W+ + SI F W++ H+ +P
Sbjct: 1578 QDDVAYWSLTSNGEFSTRSAWEAIRLRKSPNVLCSLLWHKSIPLSISFFLWRVFHNWIPV 1637
Query: 3929 SMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVWN 4048
+R+ ++ + C+ CN +ESL H+ D A QVWN
Sbjct: 1638 DIRLKEKGFHLASKCICCNS-EESLIHVLWDNPIAKQVWN 1676
Score = 121 bits (304), Expect(5) = 1e-93
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Frame = +2
Query: 1061 YGSPYRPLKFSSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDML 1240
Y R + W +R +++ + PW++ G N ++ E+ + + ++F+ L
Sbjct: 692 YAKCTRQERLELWNCLRSLSSDMQGPWMVGGDFNTIVSCAERLNGAPPHGGSMEDFVATL 751
Query: 1241 NSLGQHDLGFSGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHV 1420
G D GF G FTW N + QRLDR + N W + + ++ + HL SDH
Sbjct: 752 FDCGLIDAGFEGNSFTWTNNHMF-----QRLDRVVYNPEWAHCFSSTRVQHLNRDGSDHC 806
Query: 1421 PISLNNHVTWNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDL 1600
P+ ++ G F++ H +E++W V ++ S F + +K DL
Sbjct: 807 PLLISCATASQKGPSTFRFLHAWTKHHDFLPFVERSWQVPLNSSGLTAFWIKQQRLKRDL 866
Query: 1601 RKWNKEIYGNINTNIQNCK---EKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWK 1771
+ WNK+I+G+I ++ + EK + + PS+I + K +L I+E FW+
Sbjct: 867 KWWNKQIFGDIFEKLKRAEIEAEKREKEFQQDPSSINRNLMNKAYAKLNRQLSIEELFWQ 926
Query: 1772 IKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLSDGNGNWLHSKKRYI 1918
KS + + G+RNT +FH R + RN I + D GN ++ +YI
Sbjct: 927 QKSGVKWLVEGERNTKFFHLRMRKKRVRNNIFRIQDSEGN-IYEDPQYI 974
Score = 91.3 bits (225), Expect(5) = 1e-93
Identities = 46/131 (35%), Positives = 75/131 (57%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M + + S+ + L+PK ++FRPI LC KI++K +ANR+ +L IIS QS
Sbjct: 1069 MPQGVTSTTLVLLPKKPNSCQWSDFRPISLCTVLNKIVTKTLANRLSKILPSIISENQSG 1128
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+ GR +SDNI +A EL+ +DM+K +DR+ W+FL + ++ GF+
Sbjct: 1129 FVNGRLISDNILLAQELV--GKLDAKARGGNVVLKLDMAKAYDRLNWDFLYLMMKQFGFN 1186
Query: 2551 QKWYNIIIQCL 2583
+W ++I C+
Sbjct: 1187 DRWISMIKACI 1197
Score = 52.4 bits (124), Expect(5) = 1e-93
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 2595 SIMLNGSPCGFFKPSRGLRQGDPLSPYLFLFCMEALSRTISHAENINLIHGHKIVNHAPS 2774
S+++NGS G+FK RGLRQGD +SP LF+ + LSR I+ L + HK + +
Sbjct: 1203 SLLINGSLVGYFKSERGLRQGDSISPLLFVLAADYLSRGIN-----QLFNRHKSLLYLSG 1257
Query: 2775 A----SHXXXXXXXXXXXXXTTDASENLIRIFKDFGEASGQLSKPKQVGCFL 2918
SH A + ++ +++ E SGQ Q CF+
Sbjct: 1258 CFMPISHLAFADDIVIFTNGCRPALQKILVFLQEYEEVSGQ-QVNHQKSCFI 1308
Score = 41.6 bits (96), Expect(5) = 1e-93
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +3
Query: 1914 ISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPNK 2093
I + ++FQ++ T LIP I+ ++N L P EIK ++FN++ +
Sbjct: 974 IQNSAVQYFQNLLTAEQCDFSRFDPSLIPRTISITDNEFLCAAPSLKEIKEVVFNIDKDS 1033
Query: 2094 XXXXXXXXXXXXQRNWETISSDLVQMIQTFFS 2189
Q W+ I DL++ + FF+
Sbjct: 1034 VAGPDGFSSLFYQHCWDIIKQDLLEAVLDFFN 1065
>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
Length = 1254
Score = 138 bits (348), Expect(4) = 6e-90
Identities = 93/327 (28%), Positives = 153/327 (46%), Gaps = 26/327 (7%)
Frame = +2
Query: 3065 MKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRDFWWGKHI 3244
+K +L W L+ G+ +++K V +M ++ M+CF+LP C++L FWW
Sbjct: 738 LKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDS-C 796
Query: 3245 DTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCASLLKAKYF 3424
D + ++ + W+ GGLGF++I FN A++AK WRL P L + LLK++YF
Sbjct: 797 DHSRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYF 856
Query: 3425 PNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIPDK--RHP 3598
TD LD L Q S+ + I G + VG G + +W D WI D R P
Sbjct: 857 DATD--FLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAP 914
Query: 3599 LLKPSTGTYNFNQVCDLITQAKTL--------DETKLNTCFDRDTIIKIKQIQIPLDNRE 3754
K N + D+ + K L DE L+ F + I++IK I+ P+ ++
Sbjct: 915 WRK--------NLIYDVTLKVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQA 965
Query: 3755 DTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXM------------IWNMKVSPSIKLFT 3898
D W LN++G F+V + +WN++ P IK+F
Sbjct: 966 DFFVWKLNKSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFL 1025
Query: 3899 WKMAHSILPNSMRVD----AILPYINT 3967
WK+ ILP + ++ +++P++ +
Sbjct: 1026 WKVLSGILPVAENLNGRGMSLIPHVRS 1052
Score = 122 bits (306), Expect(4) = 6e-90
Identities = 91/348 (26%), Positives = 156/348 (44%)
Frame = +2
Query: 848 ETKQQTKNVEIILRKINIQNYWIVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQ 1027
ET ++ I + + V PVG GGL L WK++V + + +N ++A++
Sbjct: 2 ETMHSRDDLVDIQSWLEYDQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFG 61
Query: 1028 TTNSYWILSCFYGSPYRPLKFSSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFN 1207
N + +SC YG P R + +W+ I + + W + G N +L EK +
Sbjct: 62 AVN--FCVSCVYGDPDRSKRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRS 119
Query: 1208 QVEADNFIDMLNSLGQHDLGFSGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTI 1387
++ F +M+ ++ G FTW RR G + + RLDR N W +P S
Sbjct: 120 DLDCKAFNEMIKGCDLVEMPAHGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQ 178
Query: 1388 THLPPLLSDHVPISLNNHVTWNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*F 1567
T L SDH P+ + + + F++ + + I + WS G+
Sbjct: 179 TFLDFRGSDHRPVLIKLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNIS-V 237
Query: 1568 TKRLGNVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWY 1747
RL + L W K+ N I + L+ ++L I R ++ + +L Y
Sbjct: 238 ADRLRACRKSLSSWKKQNNLNSLDKINQLEAALEK-EQSLVWPIFQR-VSVLKKDLAKAY 295
Query: 1748 KIKEEFWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLSDGNGN 1891
+ +E +WK KS+++ + G+RN+ YFH + + +R RI+ L D NGN
Sbjct: 296 REEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGN 343
Score = 114 bits (286), Expect(4) = 6e-90
Identities = 88/300 (29%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M E N + + LIPKT P + RPI LC+ YKIISK++A R++P L +I+S QSA
Sbjct: 446 MPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSA 505
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+ R ++DNI VAHEL+H DMSK +DRVEW++L + +GF
Sbjct: 506 FVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFH 565
Query: 2551 QKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIP--CLLTYSSFAWKHYLEPF--- 2715
KW N I+ C+ SS VL + P ++ L PF
Sbjct: 566 LKWVNWIMVCV--------------SSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFV 611
Query: 2716 -------HML-KTSISFMATKLSIMHLLPVIYYLQMT--AFFSVMLLLMQVKTLSEFSRI 2865
H+L K + P++++L + F Q L + ++
Sbjct: 612 LCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKV 671
Query: 2866 SVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSKIKRL 3045
+NL+KS + F +D + I + L + YLG P + SK+ L
Sbjct: 672 YGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDML 731
Score = 28.9 bits (63), Expect(4) = 6e-90
Identities = 21/105 (20%), Positives = 38/105 (36%)
Frame = +3
Query: 1875 VMAMETGYILKKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYT 2054
V A G + K T F + VS ++E+L+G +
Sbjct: 354 VAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSA----------------Q 397
Query: 2055 EIKNILFNMEPNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFFS 2189
EIK +F+++P Q W T+ + + ++ FF+
Sbjct: 398 EIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFA 442
>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
Length = 1270
Score = 138 bits (348), Expect(4) = 1e-89
Identities = 108/409 (26%), Positives = 169/409 (41%), Gaps = 24/409 (5%)
Frame = +2
Query: 3065 MKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKICKDLNKIQRDFWWGKHI 3244
+K +L W L+ G+ +++K V +M ++ M+CF+LP C++L FWW
Sbjct: 735 LKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDS-C 793
Query: 3245 DTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLNENPTSLCASLLKAKYF 3424
D + ++ + W+ GGLGF++I FN A++AK WRL P L + LLK++YF
Sbjct: 794 DHSRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYF 853
Query: 3425 PNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKINIWTDFWIPDK--RHP 3598
TD LD L Q S+ + I G + VG G + +W D WI D R P
Sbjct: 854 DATD--FLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAP 911
Query: 3599 LLKPSTGTYNFNQVCDLITQAKTL--------DETKLNTCFDRDTIIKIKQIQIPLDNRE 3754
K N + D+ + K L DE L+ F + I++IK I+ P+ ++
Sbjct: 912 WRK--------NLIYDVTLKVKALLNPRTGFWDEEVLHDLFLPEDILRIKAIK-PVISQA 962
Query: 3755 DTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXXM------------IWNMKVSPSIKLFT 3898
D W LN++G F+V + +WN++ P IK+F
Sbjct: 963 DFFVWKLNKSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFL 1022
Query: 3899 WKMAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVW--NHLNFSMDY 4072
WK +C E ES H + Q+W + F D
Sbjct: 1023 WK------------------------VCGELGESTNHTLFLCPLSRQIWALSDYPFPPDG 1058
Query: 4073 VKNDSHTCHDWINSWCTLSERNGIKMGRAELRSTVTWHFWKARCGKVFE 4219
N S + IN + + ++ + W WK R +FE
Sbjct: 1059 FSNGS--IYSNINHLLENKDNKEWPINLRKIFPWILWRIWKNRNSFIFE 1105
Score = 121 bits (304), Expect(4) = 1e-89
Identities = 88/327 (26%), Positives = 150/327 (45%)
Frame = +2
Query: 911 WIVPPVGSAGGLILAWKNNVNLTIIDYCENQINARILDQTTNSYWILSCFYGSPYRPLKF 1090
+ V PVG GGL L WK++V + + +N ++A++ N + +SC YG P R +
Sbjct: 20 YTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAVN--FCVSCVYGDPDRSKRS 77
Query: 1091 SSWQMIRGMATFITEPWIILG*CNVVLFENEKKSRFFFNQVEADNFIDMLNSLGQHDLGF 1270
+W+ I + + W + G N +L EK + ++ F +M+ ++
Sbjct: 78 QAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPA 137
Query: 1271 SGYPFTWNNRRIGPDFTEQRLDRGIVNNAWLNNYPTSTITHLPPLLSDHVPISLNNHVTW 1450
G FTW RR G + + RLDR N W +P S T L SDH P+ + +
Sbjct: 138 HGNGFTWAGRR-GDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKLMSSQ 196
Query: 1451 NDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLGNVKHDLRKWNKEIYGN 1630
+ F++ + + I + WS G+ RL + L W K+ N
Sbjct: 197 DSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNIS-VADRLRACRKSLSSWKKQNNLN 255
Query: 1631 INTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEEFWKIKSKEQHIALGDR 1810
I + L+ ++L I R ++ + +L Y+ +E +WK KS+++ + G+R
Sbjct: 256 SLDKINQLEAALEK-EQSLVWPIFQR-VSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNR 313
Query: 1811 NTHYFHDSARIRYRRNRIDTLSDGNGN 1891
N+ YFH + + +R RI+ L D NGN
Sbjct: 314 NSKYFHAAVKQNRQRKRIEKLKDVNGN 340
Score = 114 bits (286), Expect(4) = 1e-89
Identities = 88/300 (29%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Frame = +1
Query: 2191 MLKEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSA 2370
M E N + + LIPKT P + RPI LC+ YKIISK++A R++P L +I+S QSA
Sbjct: 443 MPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDTQSA 502
Query: 2371 FIPGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFS 2550
F+ R ++DNI VAHEL+H DMSK +DRVEW++L + +GF
Sbjct: 503 FVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSLGFH 562
Query: 2551 QKWYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIP--CLLTYSSFAWKHYLEPF--- 2715
KW N I+ C+ SS VL + P ++ L PF
Sbjct: 563 LKWVNWIMVCV--------------SSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFV 608
Query: 2716 -------HML-KTSISFMATKLSIMHLLPVIYYLQMT--AFFSVMLLLMQVKTLSEFSRI 2865
H+L K + P++++L + F Q L + ++
Sbjct: 609 LCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKV 668
Query: 2866 SVKLLAN*VNLSKSGVFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSKIKRL 3045
+NL+KS + F +D + I + L + YLG P + SK+ L
Sbjct: 669 YGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDML 728
Score = 28.9 bits (63), Expect(4) = 1e-89
Identities = 21/105 (20%), Positives = 38/105 (36%)
Frame = +3
Query: 1875 VMAMETGYILKKDISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYT 2054
V A G + K T F + VS ++E+L+G +
Sbjct: 351 VAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSA----------------Q 394
Query: 2055 EIKNILFNMEPNKXXXXXXXXXXXXQRNWETISSDLVQMIQTFFS 2189
EIK +F+++P Q W T+ + + ++ FF+
Sbjct: 395 EIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFA 439
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 150 bits (380), Expect(4) = 2e-87
Identities = 112/421 (26%), Positives = 177/421 (42%), Gaps = 20/421 (4%)
Frame = +2
Query: 3017 SLTDLKLRGFEPIMQIMKTRLMGWKNTHLNPVGRTIMIKYVTSSMSIYQMNCFRLPKKIC 3196
SL K + F + +++R+ GW L+ G+ +MIK V +++ Y M+CFRLPK I
Sbjct: 540 SLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAIT 599
Query: 3197 KDLNKIQRDFWWGKHIDTPKGVYLKGWDSFSKSITDGGLGFQNITLFNSAMIAKMGWRLN 3376
L FWW + D+ +G++ WD S +DGGLGF+N+ FNSA++AK WRL
Sbjct: 600 SKLTSAVAKFWWSSNGDS-RGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLI 658
Query: 3377 ENPTSLCASLLKAKYFPNTDVMHLDPKLKQNDSWI*KGIKSGIREIQNHSFWVVGKGDKI 3556
P SL A + K +YF ++ + + W + + S + VG G I
Sbjct: 659 TAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGW--RSMISARSLVYKGLIKRVGSGASI 716
Query: 3557 NIWTDFWIPDKRHPLLKPSTGTYNFNQVCDLITQAKTLDETKLN--------TCFDRDTI 3712
++W D WIP + P Y + D + K+L +++ N FD + +
Sbjct: 717 SVWNDPWIPAQF-----PRPAKYG-GSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDV 770
Query: 3713 IKIKQIQIPLDNREDTTTWTLNRNGKFTVXXXXXXXXXXXXXXXXXX---------MIWN 3865
I + I N EDT W + G +TV IW
Sbjct: 771 PLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWK 830
Query: 3866 MKVSPSIKLFTWKMAHSILPNSMRVDAILPYINTTCLLCNEHDESLTHLFLDYNFACQVW 4045
++ P ++ F W++ +P S + + C+ C +ES+ H + A Q+W
Sbjct: 831 VQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIW 890
Query: 4046 NHLNFSMD---YVKNDSHTCHDWINSWCTLSERNGIKMGRAELRSTVTWHFWKARCGKVF 4216
+ N T D + W S + + W+ WKAR KVF
Sbjct: 891 ALSQIPTAPGIFPSNSIFTNLDHL-FWRIPSGVDSAPY------PWIIWYIWKARNEKVF 943
Query: 4217 E 4219
E
Sbjct: 944 E 944
Score = 125 bits (314), Expect(4) = 2e-87
Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 2/283 (0%)
Frame = +1
Query: 2197 KEINSSFISLIPKTAKPLTATEFRPIVLCNTSYKIISKLIANRMKPLLNQIISPYQSAFI 2376
K +N++ I LIPKT +P TE RPI LCN YK+ISK++ R+K +L +IS QSAF+
Sbjct: 266 KRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFV 325
Query: 2377 PGRKMSDNITVAHELIHXXXXXXXXXXXXXXXXIDMSKTFDRVEWNFLIKITRKMGFSQK 2556
GR +SDNI +A E+ H DMSK +D+VEWNF+ + RKMGF +K
Sbjct: 326 DGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEK 385
Query: 2557 WYNIIIQCLPPSCL*C*MDPLADSSNLLEVLGREIPCLLTYSSFAWKHYLEPFHMLKTSI 2736
W + I+ C+ ++ + E R+ L Y L ++ K
Sbjct: 386 WISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIA-NIRKAER 444
Query: 2737 SFMATKLSIMHLLPVIYYLQMT--AFFSVMLLLMQVKTLSEFSRISVKLLAN*VNLSKSG 2910
+ T + + P + +L + F Q + E + + +N SKS
Sbjct: 445 QNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSS 504
Query: 2911 VFFSPHIDPNKERDIISILNVKPISLDDKYLGSPLFTNRSKIK 3039
+ F ++ + + DI IL + + YLG P SK K
Sbjct: 505 IQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTK 547
Score = 71.2 bits (173), Expect(4) = 2e-87
Identities = 47/164 (28%), Positives = 77/164 (46%)
Frame = +2
Query: 1403 LLSDHVPISLNNHVTWNDGAKPFKYFGPRIDHPQCRRLIEKAWSVHISGSPAF*FTKRLG 1582
L SDH P+ G + F++ I I + W++ SG F ++L
Sbjct: 2 LASDHSPVIATIADKIPRGKQNFRFDKRWIGKDGLLEAISQGWNLD-SGFREGQFVEKLT 60
Query: 1583 NVKHDLRKWNKEIYGNINTNIQNCKEKLDDANKNLPSNIKSRELAKITHELTNWYKIKEE 1762
N + + KW K + I++ K +LD A ++ + E+ ++T L Y+ +E+
Sbjct: 61 NCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRD--DDRSREEITELTLRLKEAYRDEEQ 118
Query: 1763 FWKIKSKEQHIALGDRNTHYFHDSARIRYRRNRIDTLSDGNGNW 1894
+W KS+ + LGD N+ +FH + R RNRI L D NG W
Sbjct: 119 YWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIW 162
Score = 48.9 bits (115), Expect(4) = 2e-87
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = +3
Query: 1911 DISDCLTKHFQHISTTVSPTIDENLIGLIPTCINNSENALLETIPFYTEIKNILFNMEPN 2090
DI + +FQ++ TT +P + + +G + I + N LL E++ LF + P
Sbjct: 168 DIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPE 227
Query: 2091 KXXXXXXXXXXXXQRNWETISSDLVQMIQTFFSHAERD 2204
K Q++W I SDL+ ++ +F D
Sbjct: 228 KAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFD 265