BLASTX nr result
ID: Papaver27_contig00022351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00022351
(1073 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,... 53 8e-13
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar... 54 1e-11
ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab... 52 3e-11
ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutr... 48 3e-11
ref|XP_007011261.1| Pentatricopeptide repeat-containing protein,... 51 7e-11
ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, part... 50 9e-11
ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Caps... 48 4e-10
emb|CBI25349.3| unnamed protein product [Vitis vinifera] 47 1e-09
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 47 1e-09
ref|XP_004236503.1| PREDICTED: pentatricopeptide repeat-containi... 44 2e-08
ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containi... 43 2e-07
ref|XP_006842501.1| hypothetical protein AMTR_s00077p00100730 [A... 47 5e-07
ref|XP_007203179.1| hypothetical protein PRUPE_ppa025100mg [Prun... 45 1e-06
ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containi... 46 3e-06
>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 833
Score = 53.1 bits (126), Expect(2) = 8e-13
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 971 SLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
++F+DMP +NLV WNS+ISC RNNLP+LSI+LF
Sbjct: 499 NIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLF 532
Score = 48.1 bits (113), Expect(2) = 8e-13
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPE 962
GL VD G HG++ ++G DVFV SS +DMY KFG PE
Sbjct: 455 GLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPE 495
>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 54.3 bits (129), Expect(2) = 1e-11
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +2
Query: 968 VSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+ +FT M N+V WNSMISC +RNNLPELSIDLF
Sbjct: 531 LKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLF 565
Score = 42.7 bits (99), Expect(2) = 1e-11
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
GL + FG HG + + G +VFVGSS +D+Y K GLPEM
Sbjct: 488 GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEM 529
>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
Length = 1359
Score = 52.4 bits (124), Expect(2) = 3e-11
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +2
Query: 968 VSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+ +FT M N+V WNSMISC +RNNLPELSI+LF
Sbjct: 1030 LKVFTSMRPENIVAWNSMISCYSRNNLPELSIELF 1064
Score = 43.5 bits (101), Expect(2) = 3e-11
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
GL + FG HG + + G +VFVGSS +D+Y K GLPEM
Sbjct: 987 GLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEM 1028
>ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutrema salsugineum]
gi|557112507|gb|ESQ52791.1| hypothetical protein
EUTSA_v10017587mg [Eutrema salsugineum]
Length = 858
Score = 48.1 bits (113), Expect(2) = 3e-11
Identities = 21/35 (60%), Positives = 27/35 (77%)
Frame = +2
Query: 968 VSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+ +FT M N+V WNSMISC +RNNLPE S++LF
Sbjct: 529 LKVFTSMRPDNIVAWNSMISCYSRNNLPEQSMELF 563
Score = 47.8 bits (112), Expect(2) = 3e-11
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
GL +DFG HG +T+ G +VFVGSS +D+Y K GLPEM
Sbjct: 486 GLEALDFGLQVHGGMTKTGLVLNVFVGSSLIDLYSKCGLPEM 527
>ref|XP_007011261.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508728174|gb|EOY20071.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 849
Score = 50.8 bits (120), Expect(2) = 7e-11
Identities = 23/42 (54%), Positives = 28/42 (66%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
GL VD G HGY+ ++G DVFV +S VDMY KFG P+M
Sbjct: 471 GLENVDLGCMIHGYVVKSGLEADVFVATSLVDMYSKFGFPDM 512
Score = 43.9 bits (102), Expect(2) = 7e-11
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 971 SLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+LF MP +NLV WN+++SC RN+LP+ SI LF
Sbjct: 515 NLFFHMPHKNLVAWNTIMSCYCRNSLPDQSIKLF 548
>ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, partial [Populus trichocarpa]
gi|550325356|gb|EEE95266.2| hypothetical protein
POPTR_0013s09430g, partial [Populus trichocarpa]
Length = 792
Score = 50.1 bits (118), Expect(2) = 9e-11
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +2
Query: 971 SLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
++F+DMP +NLV WNS+ISC RN LP+LSI LF
Sbjct: 459 NVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLF 492
Score = 44.3 bits (103), Expect(2) = 9e-11
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEMT 968
GL V+ G HG ++G DVFV SS VDMY KF P+M+
Sbjct: 415 GLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMS 457
>ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Capsella rubella]
gi|482564354|gb|EOA28544.1| hypothetical protein
CARUB_v10024761mg [Capsella rubella]
Length = 858
Score = 48.1 bits (113), Expect(2) = 4e-10
Identities = 21/35 (60%), Positives = 28/35 (80%)
Frame = +2
Query: 968 VSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+ +FT + + N+V WNSMISC +RNNLPELSI+ F
Sbjct: 529 LKVFTSIRKDNIVAWNSMISCYSRNNLPELSIEHF 563
Score = 43.9 bits (102), Expect(2) = 4e-10
Identities = 21/42 (50%), Positives = 28/42 (66%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
GL + FG +HG + + G +VFVGSS +D+Y K GLPEM
Sbjct: 486 GLEALRFGLQYHGGMIKTGLVLNVFVGSSLIDLYSKCGLPEM 527
>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 47.0 bits (110), Expect(2) = 1e-09
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +2
Query: 974 LFTDMPERNLVYWNSMISCCNRNNLPELSIDL 1069
+F+ MP +NLV WNSMISC + N LPE+SI+L
Sbjct: 908 VFSSMPNKNLVAWNSMISCYSWNGLPEMSINL 939
Score = 43.1 bits (100), Expect(2) = 1e-09
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPE 962
GL V+ G+ HG+ + G +DVFV S VDMY KFG E
Sbjct: 863 GLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 903
>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 47.0 bits (110), Expect(2) = 1e-09
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = +2
Query: 974 LFTDMPERNLVYWNSMISCCNRNNLPELSIDL 1069
+F+ MP +NLV WNSMISC + N LPE+SI+L
Sbjct: 503 VFSSMPNKNLVAWNSMISCYSWNGLPEMSINL 534
Score = 43.1 bits (100), Expect(2) = 1e-09
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +3
Query: 840 GLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPE 962
GL V+ G+ HG+ + G +DVFV S VDMY KFG E
Sbjct: 458 GLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAE 498
>ref|XP_004236503.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Solanum lycopersicum]
Length = 976
Score = 43.5 bits (101), Expect(2) = 2e-08
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3
Query: 837 GGLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPE 962
GG+L V G HG ++ G DVFV ++ + MYGKFGL E
Sbjct: 318 GGVLDVGMGKAIHGMASKMGLVGDVFVSNALISMYGKFGLAE 359
Score = 42.7 bits (99), Expect(2) = 2e-08
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +2
Query: 953 VARDDVSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
+A + + +F MPERNLV WNSMIS + N E S DLF
Sbjct: 357 LAEEAMKVFEYMPERNLVSWNSMISVFSANGYIEQSFDLF 396
>ref|XP_004301089.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Fragaria vesca subsp. vesca]
Length = 957
Score = 42.7 bits (99), Expect(2) = 2e-07
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = +3
Query: 837 GGLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGL 956
GG+L V G G HG + + G +DVF+G++ + +Y KFG+
Sbjct: 191 GGVLDVGLGQGVHGMVVKMGLVSDVFIGNALIALYAKFGM 230
Score = 40.4 bits (93), Expect(2) = 2e-07
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +2
Query: 959 RDDVSLFTDMPERNLVYWNSMISCCNRNNLPELSIDL 1069
RD V +F MPERNLV WNSMI + N + E S L
Sbjct: 232 RDAVKMFDKMPERNLVSWNSMIGGFSENGMCEESFGL 268
>ref|XP_006842501.1| hypothetical protein AMTR_s00077p00100730 [Amborella trichopoda]
gi|548844587|gb|ERN04176.1| hypothetical protein
AMTR_s00077p00100730 [Amborella trichopoda]
Length = 548
Score = 46.6 bits (109), Expect(2) = 5e-07
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +3
Query: 861 GYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
G HGYI ++G S+D+FVG++ +DMY K GLPE+
Sbjct: 377 GTQMHGYIMKSGFSSDIFVGTAIIDMYAKCGLPEL 411
Score = 35.0 bits (79), Expect(2) = 5e-07
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 977 FTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
F+DM NL WN++I +N+LPE SI+LF
Sbjct: 416 FSDMKYTNLATWNAIICGFYQNSLPERSIELF 447
>ref|XP_007203179.1| hypothetical protein PRUPE_ppa025100mg [Prunus persica]
gi|462398710|gb|EMJ04378.1| hypothetical protein
PRUPE_ppa025100mg [Prunus persica]
Length = 765
Score = 45.1 bits (105), Expect(2) = 1e-06
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = +3
Query: 837 GGLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPE 962
G L ++ G G HGY+ + G S VFV +S VDMYGK G+ E
Sbjct: 124 GALEWIGIGKGVHGYVVKLGCSGCVFVATSLVDMYGKCGVVE 165
Score = 35.0 bits (79), Expect(2) = 1e-06
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 953 VARDDVSLFTDMPERNLVYWNSMISCCNRNNLPELSIDLF 1072
V D +F MPERN+V WNS+I +N L E +I +F
Sbjct: 163 VVEDARKVFDGMPERNVVTWNSVIVGYVQNGLNEEAIKVF 202
>ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containing protein At2g40720-like
[Solanum tuberosum]
Length = 850
Score = 46.2 bits (108), Expect(2) = 3e-06
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +2
Query: 974 LFTDMPERNLVYWNSMISCCNRNNLPELSIDL 1069
+F+ +P +NLV WNS+ISC ++N+LPELS++L
Sbjct: 519 VFSGVPHKNLVAWNSLISCYSKNDLPELSLNL 550
Score = 32.7 bits (73), Expect(2) = 3e-06
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 834 SGGLLYVDFGYGFHGYITENGTSNDVFVGSSPVDMYGKFGLPEM 965
S GL ++ G H ++G D V S VDMY G PEM
Sbjct: 472 SAGLESLELGCSIHAITVKSGEEVDSSVSCSLVDMYSNCGKPEM 515