BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00022134
         (2846 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun...    64   7e-19
gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold ...    63   7e-19
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626...    72   7e-18
ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein A...    72   9e-18
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621...    60   4e-16
ref|XP_007203074.1| hypothetical protein PRUPE_ppa023544mg, part...    62   1e-15
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part...    60   1e-15
ref|XP_007209038.1| hypothetical protein PRUPE_ppa014970mg [Prun...    62   1e-15
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    65   3e-15
ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein A...    55   7e-15
ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617...    55   5e-14
ref|XP_004301358.1| PREDICTED: putative ribonuclease H protein A...    65   2e-13
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    64   3e-13
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   9e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    70   1e-12
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    56   2e-12
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    54   5e-12
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A...    52   5e-12
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...    65   2e-11
ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein A...    50   2e-11

>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
            gi|462406722|gb|EMJ12186.1| hypothetical protein
            PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 63.9 bits (154), Expect(2) = 7e-19
 Identities = 48/173 (27%), Positives = 73/173 (42%)
 Frame = +2

Query: 563  TKKDSMIGNNKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPIS 742
            T+  ++  +N+   W  PT     +N+D +W  +S   G  I+ RN  G F  G + P  
Sbjct: 594  TEHPTLSNDNQQQLWNPPTSPFVKVNVDASWNPNSKRVGIGILIRNTHGDFIKGSSIPSV 653

Query: 743  ATSPEEAETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQ 922
            A S  EAE        K A               + + Y  G LS   W+   I+  + Q
Sbjct: 654  ANSAIEAEAQACLEGCKLA---------------AEMGYRQGPLSNGRWEIYPILSTI-Q 697

Query: 923  EFSFCNNFKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
            +   C     + + PRTAN+  D LA  A +  +   W N PPS +++ L  D
Sbjct: 698  DVLNCFQTHVWTWIPRTANQAADHLAMLAISRMSPEVWVNRPPSSLMHILNKD 750



 Score = 59.7 bits (143), Expect(2) = 7e-19
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
 Frame = +1

Query: 7   DTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDAF*------KKLWSLNISQRIKKI 168
           D L W +  +G+++V+S Y+ L        N     +        K++W  ++  +I+  
Sbjct: 396 DRLIWPMERNGSYSVRSGYHWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRNF 455

Query: 169 AWKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTH 348
            W+ L+N ++T++   + +   SP C       ET EHI L C + + VW    C ++  
Sbjct: 456 LWRALRNCLATSANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVWFR--CSLNLR 513

Query: 349 FNPNTTFLEVFKEWLGKDSDIIN-----------IEIILTKIWFIWKERCNRAFD 480
            N     +  F +WLG   ++I            + +I    W IWK++C    +
Sbjct: 514 INRQA--VTSFGQWLG---NVIEKGKTPQERSRCLTVIAYFCWQIWKDKCKAVLE 563


>gb|ABD28710.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 393

 Score = 63.2 bits (152), Expect(2) = 7e-19
 Identities = 51/192 (26%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
 Frame = +1

Query: 7   DTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDAF*KKLWSLNISQRIKKIAWKCLQ 186
           D+L W +  +G ++VKS Y    E  +NN +L +P  +   +W L +  R+KK+ W+  +
Sbjct: 19  DSLLWKVEKNGCYSVKSAYRVCVEDVVNNAHLRKP-GYWSGIWRLKVPPRVKKLVWRVCR 77

Query: 187 NDVSTNSKRARFQSDISPSCAFGC--CE--IETVEHIFLHCNFAKAVWDTEP-----CPV 339
               T   R R  S    +C   C  CE   E   HIF HC  A  VW+T        P 
Sbjct: 78  ECFPT---RVRLISR-GVNCPSACVKCEDPHEDCYHIFFHCRTAIDVWNTANVWHLIAPS 133

Query: 340 DTHFNPNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEI 519
            + F+     +    + L        +E I+T +W IWK R  + +    ++   +    
Sbjct: 134 LSQFDNAPDIIFNLLQKLSAS----QMESIVTIMWSIWKSRNLKLWQQVSESSVTILERA 189

Query: 520 QRHLAYWHKEKY 555
           +  L  W K  +
Sbjct: 190 KHLLEGWRKANH 201



 Score = 60.5 bits (145), Expect(2) = 7e-19
 Identities = 50/169 (29%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
 Frame = +2

Query: 572  DSMIGNNK--NSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISA 745
            DS   +N+  N +W+ P  G    N+D ++ +SS   G  +  R+  G     +    S 
Sbjct: 221  DSQNTDNRYGNIRWRKPKSGRLKCNVDASFSTSSNKVGIGMCIRDSEGNHVRSKTMWFSP 280

Query: 746  TSPEE-AETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQ 922
              P    E LG +HA +W     L++   E D K++ DY N      T +  +IM+   Q
Sbjct: 281  LCPVNIGEALGLYHATRWINELQLTNVDFEVDSKTIADYFNKARGDNT-EFGSIMENTIQ 339

Query: 923  EFSFCNNF---KDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCI 1060
               FCN F       F  R AN V   LAK A      F   +  P+CI
Sbjct: 340  ---FCNIFLTNSHVEFTRRQANEVAHELAK-AATLGPSFHIFDESPTCI 384


>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
          Length = 1452

 Score = 72.0 bits (175), Expect(2) = 7e-18
 Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
 Frame = +1

Query: 1    KEDTLRWLLTNSGNFTVKSMYNKLQEKTINNY--NLGQPDAF*KKLWSLNISQRIKKIAW 174
            +ED + W     G ++VKS Y     +   N   +        K  W L++ +++K   W
Sbjct: 1091 EEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMW 1150

Query: 175  KCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFN 354
            + L+N + T     + +S   P C     ++ETV H+ + C  A+ +WD  P  V    +
Sbjct: 1151 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 1210

Query: 355  PNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQ 486
             N  F    +E   + S     E+++   W IW  R    F+G+
Sbjct: 1211 HNQDFFSAIQEMWSR-SSTAEAELMIVYCWVIWSARNKFIFEGK 1253



 Score = 48.1 bits (113), Expect(2) = 7e-18
 Identities = 52/167 (31%), Positives = 70/167 (41%), Gaps = 10/167 (5%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFF 781
            KW+ P+     LN+D A  +     G   I R+  G      A  I      E  +L   
Sbjct: 1292 KWKPPSQNVLKLNVDAAVSTKDQKVGLGAIVRDAEGKIL---AVGIKQAQFRERVSLAEA 1348

Query: 782  HAAKW----ARTKNLSDFSVEGDCKSLIDYLN---GELSQITWQNQTIMDEVRQEFSFCN 940
             A  W    A   + S   VE DCK +++ LN   G  ++I W    I+ +VR+E     
Sbjct: 1349 EAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHW----ILSDVRRE---SK 1401

Query: 941  NFKD--FYFRPRTANRVIDTLAKEA-KNFRTDFEWSNNPPSCILNDL 1072
             FK   F F PRT N     LAK A +N  TD  W    P+ + N L
Sbjct: 1402 EFKQVQFSFIPRTCNTYAHALAKFALRNSSTDV-WVGTFPAEVQNVL 1447


>ref|XP_006483194.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
           sinensis]
          Length = 765

 Score = 72.0 bits (175), Expect(2) = 9e-18
 Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
 Frame = +1

Query: 1   KEDTLRWLLTNSGNFTVKSMYNKLQEKTINNY--NLGQPDAF*KKLWSLNISQRIKKIAW 174
           +ED + W     G ++VKS Y     +   N   +        K  W L++ +++K   W
Sbjct: 404 EEDEVLWHFDKKGEYSVKSGYQLALNQNFPNEPESSNSSSRLWKIPWMLDLPEKVKIFMW 463

Query: 175 KCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFN 354
           + L+N + T     + +S   P C     ++ETV H+ + C  A+ +WD  P  V    +
Sbjct: 464 RALKNILPTAENLWKRRSLQEPICQRCKLQVETVSHVLIECKAARKIWDLAPLIVQPSKD 523

Query: 355 PNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQ 486
            N  F    +E   + S     E+++   W IW  R    F+G+
Sbjct: 524 HNQDFFSAIQEMWSR-SSTAEAELMIVYCWVIWSARNKFIFEGK 566



 Score = 47.8 bits (112), Expect(2) = 9e-18
 Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 10/165 (6%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFF 781
            KW+ P+     LN+D A  +     G   I R+  G      A  I      E  +L   
Sbjct: 605  KWKPPSQNVLKLNVDAAVSTKXQKVGLGAIVRDAEGKIL---AVGIKQAQFRERVSLAEA 661

Query: 782  HAAKW----ARTKNLSDFSVEGDCKSLIDYLN---GELSQITWQNQTIMDEVRQEFSFCN 940
             A  W    A   + S   VE DCK +++ LN   G  ++I W    I+ +VR+E     
Sbjct: 662  EAIHWGLQVANQISSSSLIVESDCKEVVELLNNTKGSRTEIHW----ILSDVRRE---SK 714

Query: 941  NFKD--FYFRPRTANRVIDTLAKEA-KNFRTDFEWSNNPPSCILN 1066
            +FK   F F PRT N     LAK A +N  TD  W    P+ + N
Sbjct: 715  DFKQVQFSFIPRTCNTYAHALAKFALRNSSTDV-WVGTFPAEVQN 758


>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
          Length = 2303

 Score = 60.1 bits (144), Expect(2) = 4e-16
 Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 5/189 (2%)
 Frame = +1

Query: 1    KEDTLRWLLTNSGNFTVKSMYN-KLQEKTINN-YNLGQPDAF*KKLWSLNISQRIKKIAW 174
            K D + W     G ++VKS Y   L+ K  +   N G      K +WS+ + +++K   W
Sbjct: 974  KVDEMMWHYDKHGEYSVKSGYQIALKLKAPDEPSNSGSNSKRWKAVWSMELPEKMKIFMW 1033

Query: 175  KCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFN 354
            +  +N + T     + +    P C     E+ETV H  L C  A+ +W      V     
Sbjct: 1034 RAARNLLPTAENLWKRKCLKDPICQGCNREVETVRHALLDCKAARKIWYHATSSVQISNA 1093

Query: 355  PNTTFLE-VFKEW--LGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEIQR 525
             N   LE +++ W   GK       E  +   W IW  R  R F+G+    +  A + + 
Sbjct: 1094 QNQDILEFIYEVWSTWGK----TKAEQTIAFCWAIWFARNKRIFEGKKSDPRASAAKAES 1149

Query: 526  HLAYWHKEK 552
             L  +H+ +
Sbjct: 1150 LLEAYHRAR 1158



 Score = 54.3 bits (129), Expect(2) = 4e-16
 Identities = 48/166 (28%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFF 781
            KW+ P      +N+D A  +    AG   + ++ +G      A         E  +    
Sbjct: 1175 KWEPPPGNFLKVNVDAAINNRDQVAGLGAVIKDPSGKIV---AAGTKQVPLREGVSFAEA 1231

Query: 782  HAAKW----ARTKNLSDFSVEGDCKSLIDYLN---GELSQITWQNQTIMDEVRQEFSFCN 940
             A +W    AR  +LS   +E DCK ++D LN   G  + I+W    I ++ R       
Sbjct: 1232 EAMEWGLQIARELSLSALIMETDCKEVVDLLNNTKGSRTGISWVISDIQEQRR------- 1284

Query: 941  NFKDFYFR--PRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDL 1072
            +FK+  FR  PRT N    +LAK A    T   W ++ P  ILN L
Sbjct: 1285 DFKEVKFRHIPRTCNTCAHSLAKLAVGANTSAVWLDHIPDEILNCL 1330


>ref|XP_007203074.1| hypothetical protein PRUPE_ppa023544mg, partial [Prunus persica]
            gi|462398605|gb|EMJ04273.1| hypothetical protein
            PRUPE_ppa023544mg, partial [Prunus persica]
          Length = 394

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 46/180 (25%), Positives = 75/180 (41%)
 Frame = +2

Query: 542  IKKNT*FTKKDSMIGNNKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKD 721
            ++++   T+  + + +     W+ P  G   +N D AW +    AG  ++ RN    F  
Sbjct: 212  LRRHAISTRNGAGVFSQPTDIWKPPVNGAIKVNFDAAWKNHE--AGLGVVMRNHNKDFCY 269

Query: 722  GRAGPISATSPEEAETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQT 901
            G A      S   AET     A + A  +  S   +E D K LID + G +    W    
Sbjct: 270  GFASKRCCNSALNAETEAAIEALRCASLRGYSKIEMESDSKVLIDNIKGNVCTKAWTILP 329

Query: 902  IMDEVRQEFSFCNNFKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
            ++DE+R+  S   +  ++ + PR ANR     A           W+N PP  ++  L  D
Sbjct: 330  LLDEIRR-LSARFSDVEWCWIPRGANRAAHVTAAIGLRAVCPQGWANQPPPSLVRVLASD 388



 Score = 50.8 bits (120), Expect(2) = 1e-15
 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 10/165 (6%)
 Frame = +1

Query: 1   KEDTLRWLLTNSGNFTVKSMYNK--LQEKTINNYNLGQ---PDAF*KKLWSLNISQRIKK 165
           +ED + W    SG ++VKS YN   +    I  YN           K +W+     ++K 
Sbjct: 33  REDRIVWPWNKSGLYSVKSGYNLQVVSASYIGGYNRSSHVIERGVWKDIWASPTLPKVKF 92

Query: 166 IAWKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDT 345
             W+ +   + T     R +   SP C       E+ EH    C + +AVW   P     
Sbjct: 93  FLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNYRV 152

Query: 346 HFNPNTTFLEVF-----KEWLGKDSDIINIEIILTKIWFIWKERC 465
           +    TTF   F      +   K   +  + ++    W IWK RC
Sbjct: 153 NPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFISWEIWKARC 197


>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
            gi|462403441|gb|EMJ08998.1| hypothetical protein
            PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score = 60.1 bits (144), Expect(2) = 1e-15
 Identities = 44/163 (26%), Positives = 67/163 (41%)
 Frame = +2

Query: 563  TKKDSMIGNNKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPIS 742
            T+  + + +     W+ P  G   +N D AW +    AG  ++ RN    F  G A    
Sbjct: 758  TRNGAGVFSQPTDIWKPPVNGAIKINFDAAWKNHE--AGLGVVMRNHNKDFCYGFASKRC 815

Query: 743  ATSPEEAETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQ 922
              S   AET     A + A  +  S   +E D K LID + G +    W    ++DE+R+
Sbjct: 816  CNSALNAETEAAIEALRCASLRGYSKIEMESDSKVLIDSIKGNVCTKAWTILPLLDEIRR 875

Query: 923  EFSFCNNFKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPP 1051
              S   +  ++ + PR ANR     A           W+N PP
Sbjct: 876  -LSAGFSDVEWCWIPRGANRAAHVTAAIGLRAVCPQGWANQPP 917



 Score = 52.4 bits (124), Expect(2) = 1e-15
 Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 10/170 (5%)
 Frame = +1

Query: 1    KEDTLRWLLTNSGNFTVKSMYNK--LQEKTINNYNLGQ---PDAF*KKLWSLNISQRIKK 165
            +ED + W    SG ++VKS YN   +    I  YN           K +W+     ++K 
Sbjct: 559  REDRIVWPWNKSGLYSVKSGYNLQVVSASYIGGYNRSSHVIERGVWKDIWASPTLPKVKF 618

Query: 166  IAWKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDT 345
              W+ +   + T     R +   SP C       E+ EH    C + +AVW   P     
Sbjct: 619  FLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVWFGSPLNYRV 678

Query: 346  HFNPNTTFLEVF-----KEWLGKDSDIINIEIILTKIWFIWKERCNRAFD 480
            +    TTF   F      +   K   +  + ++    W IWK RC   F+
Sbjct: 679  NPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFISWEIWKARCKFLFE 728


>ref|XP_007209038.1| hypothetical protein PRUPE_ppa014970mg [Prunus persica]
            gi|462404773|gb|EMJ10237.1| hypothetical protein
            PRUPE_ppa014970mg [Prunus persica]
          Length = 352

 Score = 62.0 bits (149), Expect(2) = 1e-15
 Identities = 48/170 (28%), Positives = 72/170 (42%)
 Frame = +2

Query: 572  DSMIGNNKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATS 751
            +  +G+  + + Q   P  +  N    W    +P     + +N  G F  G + P  A S
Sbjct: 180  NEFLGSLDHGRHQTEHPTLSNDNQQQLWNPLPLP-----LSKNTHGDFIKGSSIPSVANS 234

Query: 752  PEEAETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFS 931
              EAE        K A        + E DCK +I  L G LS   W+   I++ VR   +
Sbjct: 235  AIEAEAQACLEGCKLAAEMGYRHVTFESDCKEVISPLKGPLSNGRWEIYPILNTVRDVLN 294

Query: 932  FCNNFKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
             C     + + PRTAN+  D LA  A +  +   W N PPS +++ L  D
Sbjct: 295  -CFQTYVWTWIPRTANQAADHLAMLAISRMSPEVWVNRPPSSLMHILNKD 343



 Score = 50.4 bits (119), Expect(2) = 1e-15
 Identities = 38/163 (23%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
 Frame = +1

Query: 25  LTNSGNFTVKSMYNKLQEKTINNYN------LGQPDAF*KKLWSLNISQRIKKIAWKCLQ 186
           +  +G+++V S Y+ L        N      +       K++W  ++  +I+   W+ L+
Sbjct: 1   MERNGSYSVHSGYHWLHNTECRRRNPRPSSSMAIDPRLWKQIWKADVPPKIRNFLWRALR 60

Query: 187 NDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFNPNTT 366
           N ++T++   + +   SP C       ET EHI L C + + VW    C ++   N    
Sbjct: 61  NCLATSANLHKKKIARSPVCPLCNDHPETAEHILLLCPWVEPVW--FGCSLNLRINRQA- 117

Query: 367 FLEVFKEWLGKDSDIIN-----------IEIILTKIWFIWKER 462
            +  F +WLG   ++I            + +I    W IWK+R
Sbjct: 118 -VTSFGQWLG---NVIEKGKTPQERSRCLTVIAYFCWQIWKDR 156


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score = 65.1 bits (157), Expect(2) = 3e-15
 Identities = 52/180 (28%), Positives = 79/180 (43%), Gaps = 4/180 (2%)
 Frame = +1

Query: 4    EDTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDAF*KKLWSLNISQRIKKIAWKCL 183
            ED L W  +++G  T K  +  LQ+ +           + K LWS  I  R+   AWK +
Sbjct: 496  EDKLIWQASSTGELTAKQAFLFLQQAS-------PVVPWGKPLWSKFILPRMSLHAWKVM 548

Query: 184  QNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFNPNT 363
            +  V +     R    +   C F     E+++HIFLHC+FA +VW+      +    PN 
Sbjct: 549  RGTVISYHLLQRRGVALVSRCEFCGNSTESLDHIFLHCSFAASVWNHFIYIFEIGLVPN- 607

Query: 364  TFLEVFKEWLGKDSDIINIEIIL----TKIWFIWKERCNRAFDGQHQTHQQVALEIQRHL 531
            T  EVF   L  D      E+ L    + +W+IW  R    FD +  +   V   + RH+
Sbjct: 608  TIAEVFSLGLAMDRSPQLKELWLICFTSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHI 667



 Score = 46.2 bits (108), Expect(2) = 3e-15
 Identities = 42/159 (26%), Positives = 62/159 (38%)
 Frame = +2

Query: 605  WQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFFH 784
            W  P+ G   +N D AW       G+  +FR   G F    A  I   S   A+ +    
Sbjct: 708  WHPPSIGWIKINSDGAWKHEEGIGGFGAVFRYYKGQFVGAFASHIDIPSSIAAKVMVVIT 767

Query: 785  AAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKDFYFR 964
            A + A  ++     +E D  +++DY+    S + WQ +          S         F 
Sbjct: 768  AIELAWVRDWKHVWLEVDFSTVLDYIRSP-SLVPWQLRVRWLNCLYRISTMTFKSSHIF- 825

Query: 965  PRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
             R  NRV D LA    +   +  W + PPS IL+  E D
Sbjct: 826  -REGNRVADALANHGTSMSEEV-WWDVPPSFILSYYERD 862


>ref|XP_004293076.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 487

 Score = 55.1 bits (131), Expect(2) = 7e-15
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 1/175 (0%)
 Frame = +1

Query: 7   DTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDAF*KKLWSLNISQRIKKIAWKCLQ 186
           D   W     G F+VKS    LQ + +  +   Q D    K+W L++  ++K   W  L+
Sbjct: 128 DECIWAPPTDGRFSVKSA-TWLQYQNLEKHQ--QSDLI-NKVWKLDVPLKVKLFGWLLLR 183

Query: 187 NDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFNPNTT 366
             + T  + ++F      SC     + ET +H+F HC+F   V+      +    + +  
Sbjct: 184 GRLKTRDRLSKFGYIDDNSCPLCDSDNETADHLFGHCDFTTEVF--RLAGISALMDWHEG 241

Query: 367 FLEVFKE-WLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEIQRH 528
           +L+V +E ++ +  D      +L   W IWK R +  F     T   VA     H
Sbjct: 242 YLKVLREMFINQPYDKFLFAKVLIIYWQIWKARNDTIFRDVITTATNVAATAAFH 296



 Score = 55.1 bits (131), Expect(2) = 7e-15
 Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
 Frame = +2

Query: 620  PGHNT---LNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFFHAA 790
            P HN    +N D +    S   G+  +FRN  G      A  + +T+   AE      + 
Sbjct: 323  PPHNNFIKINFDGSVQGRSAAGGF--VFRNSDGNVILAAAKGLGSTTIPTAEATALRDSL 380

Query: 791  KWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKDFYFRP- 967
              AR +   +  VEGD K +ID +NG+LS   W+ Q I+ ++R   +   +F    F   
Sbjct: 381  VKARDRGYMNVQVEGDSKLVIDAINGKLSP-PWRLQKIVQDIR---TIATSFSSVCFNHV 436

Query: 968  -RTANRVIDTLAKEAKNFRTDFEWSNNPPSCI 1060
             R AN + D  A E        EW +  P+ +
Sbjct: 437  YREANFMADAFANEGHQLPNGHEWQDGYPTVV 468


>ref|XP_006470496.1| PREDICTED: uncharacterized protein LOC102617255 [Citrus sinensis]
          Length = 440

 Score = 54.7 bits (130), Expect(2) = 5e-14
 Identities = 42/188 (22%), Positives = 78/188 (41%), Gaps = 4/188 (2%)
 Frame = +1

Query: 7   DTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDA-F*KKLWSLNISQRIKKIAWKCL 183
           D+  W+    G +TV+S Y  L         L  P +    +LW L +  ++K   W+ L
Sbjct: 90  DSWYWMHEAKGVYTVRSSYKMLAPC------LDIPSSSIWNQLWRLEVPSKVKHFMWRAL 143

Query: 184 QNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFNPNT 363
            + + T     +   ++ P+C       E++ HI L C FA+  W T        F  + 
Sbjct: 144 TDVLPTTENLLKKYVEVPPACITCHASSESICHILLQCPFARTCWMTS----SIGFFGDG 199

Query: 364 TFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEIQRHLAYW- 540
           + L ++ E L     +   ++ +   W +W+ R +  + G+    QQ+       L  W 
Sbjct: 200 SNLLLWLEALFNRYSLEQTQLAVMICWSLWQNRNDMVWRGKTSGVQQLLNSAGHFLFQWQ 259

Query: 541 --HKEKYL 558
              K+++L
Sbjct: 260 LVRKQQFL 267



 Score = 52.4 bits (124), Expect(2) = 5e-14
 Identities = 43/159 (27%), Positives = 71/159 (44%), Gaps = 3/159 (1%)
 Frame = +2

Query: 605  WQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISAT-SPEEAETLGFF 781
            W+ P  G    N+DVA  +     G+  + R+    F   R   I    S  +AE LG  
Sbjct: 281  WEPPVAGRLKCNVDVALFAFRGYIGFGNVIRDSNCAFMAARCCSIPGRFSARDAEALGVR 340

Query: 782  HAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKD--F 955
             A  W +   LS+ ++E DC ++ + L   LS  +     I+++ R   +  N+ +D  F
Sbjct: 341  EALSWIKQLQLSNVTIEMDCLTVYNALVNNLSGPS-SFSLIIEDCR---ALSNSIRDVSF 396

Query: 956  YFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDL 1072
             F  R+AN V   +A+   +     EW   PP  ++ +L
Sbjct: 397  SFVRRSANSVAHYVAQAGNSLSGHGEWRVVPPLFLIANL 435


>ref|XP_004301358.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 313

 Score = 65.1 bits (157), Expect(2) = 2e-13
 Identities = 49/161 (30%), Positives = 68/161 (42%)
 Frame = +2

Query: 599  SKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGF 778
            S W  P      +N D AW  S+  +G  II  +  G    G +   S  S  EAE    
Sbjct: 148  SLWVPPLVNVVKINFDGAWKESNHNSGLGIIICSHMGVSIAGASLFRSYNSTVEAEAKAL 207

Query: 779  FHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKDFY 958
                K A    L    VEGDC+ +I  LN  L+   W+   I+ +V            + 
Sbjct: 208  LCGVKMAVVLKLEHIIVEGDCQEVIKALNESLASPCWRISPILKKVAHLVPLFRRI-HWN 266

Query: 959  FRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
            + PR ANR+ +  AK A       EW+N PP+ ++N L  D
Sbjct: 267  WVPREANRLANAAAKLAIQSLCSQEWANRPPNSLINVLRSD 307



 Score = 40.0 bits (92), Expect(2) = 2e-13
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 11/138 (7%)
 Frame = +1

Query: 172 WKCLQNDVSTNSKRARFQSDISPSCAFGCCEI--ETVEHIFLHCNFAKAVWDTEPCPVDT 345
           W+ L N +   S    FQ  I  +   G C    ET+EH   HC +  A+W         
Sbjct: 2   WRALSNALP--SMWYLFQRKIVKTPICGICGDYPETIEHCLFHCPWTLAMW----FGCSL 55

Query: 346 HFNPNTTFLEVFKEWL---GKDSDIINIE------IILTKIWFIWKERCNRAFDGQHQTH 498
            + P+   +   +EWL    K++ + + E      ++   +W IWK +C+          
Sbjct: 56  GYIPDRGRISHLEEWLLEIHKNAGMFSCEREDVFNLVCLHLWEIWKHKCSVIMRNSTPNP 115

Query: 499 QQVALEIQRHLAYWHKEK 552
             V   IQR +  W + +
Sbjct: 116 SLVNENIQRGILNWEEAR 133


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 64.3 bits (155), Expect(2) = 3e-13
 Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 5/192 (2%)
 Frame = +1

Query: 4    EDTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQPDA-F*KKLWSLNISQRIKKIAWKC 180
            +D+L WL   SG +T K+ Y   +   +N++   Q D  + K +W ++ S ++K   WK 
Sbjct: 934  QDSLVWLPVKSGEYTTKTGYALAK---LNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKA 990

Query: 181  LQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVD----TH 348
            ++  +      +R   +   +C   C + E+  H+ L C +AK VW+  P   +    TH
Sbjct: 991  MKGALPVGEALSRRNIEAEVTCK-RCGQTESSLHLMLLCPYAKKVWELAPVLFNPSEATH 1049

Query: 349  FNPNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEIQRH 528
             +     ++  +      + + +  +    +W +WK R    FD    + + + L+    
Sbjct: 1050 SSVALLLVDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILD 1109

Query: 529  LAYWHKEKYLVH 564
               W + + L+H
Sbjct: 1110 ARAWMEAQLLIH 1121



 Score = 40.4 bits (93), Expect(2) = 3e-13
 Identities = 39/139 (28%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
 Frame = +2

Query: 599  SKWQFPTPGHNTLN--LDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETL 772
            S +  PTP     +  +D AW +S        +        K+ ++      S   AETL
Sbjct: 1127 SDYPSPTPNLKVTSCFVDAAWTTSGYCGMGWFLQDPYKVKIKENQSSSSFVGSALMAETL 1186

Query: 773  GFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKD 952
                A   A +  +   +V  DCK LI  LN   S +  +   ++ ++R E S       
Sbjct: 1187 AVHLALVDALSTGVRQLNVFSDCKELISLLNSGKSIVELRG--LLHDIR-ELSVSFTHLC 1243

Query: 953  FYFRPRTANRVIDTLAKEA 1009
            F+F PR +N V D+LAK A
Sbjct: 1244 FFFIPRLSNVVADSLAKSA 1262


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 56.2 bits (134), Expect(2) = 9e-13
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 3/186 (1%)
 Frame = +1

Query: 1    KEDTLRWLLTNSGNFTVKSMY-NKLQE--KTINNYNLGQPDAF*KKLWSLNISQRIKKIA 171
            K D   W+++ +G FTV+S Y ++L E  KT  + + G      +K+W   I  ++K  +
Sbjct: 1008 KPDQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIPPKVKLFS 1067

Query: 172  WKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHF 351
            WK + N ++  +   +   +I  +C     + ET EH+   C+ +   W   P  + T  
Sbjct: 1068 WKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGN 1127

Query: 352  NPNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQVALEIQRHL 531
                +F    +  L    D     +     W IW  R    F+ +    Q+V     R +
Sbjct: 1128 IEAGSFRIWVESLLDTHKDTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGV 1187

Query: 532  AYWHKE 549
              + +E
Sbjct: 1188 MEFEEE 1193



 Score = 46.6 bits (109), Expect(2) = 9e-13
 Identities = 45/167 (26%), Positives = 67/167 (40%), Gaps = 1/167 (0%)
 Frame = +2

Query: 587  NNKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRA-GPISATSPEEA 763
            N   + W  P  G   LN+D A +   V  G   + R+  G        G  +   P  A
Sbjct: 1204 NTHENGWSVPPVGMVKLNVDAA-VFKHVGIGMGGVVRDAEGDVLLATCCGGWAMEDPAMA 1262

Query: 764  ETLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNN 943
            E     +  K A      +  VE DCK L   L G+ S +T   + ++D++    S C+N
Sbjct: 1263 EACSLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGR-VVDDILYLASKCSN 1321

Query: 944  FKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVDK 1084
               F    R  N+V   LA+  KN      W    PS + + + +DK
Sbjct: 1322 VV-FEHVKRHCNKVAHLLAQMCKNAMEKRVWLEEYPSEVSSAVLLDK 1367


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 70.1 bits (170), Expect(2) = 1e-12
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 13/195 (6%)
 Frame = +1

Query: 7    DTLRWLLTNSGNFTVKSMYNKLQEKTINNYNLGQP------DAF*KKLWSLNISQRIKKI 168
            D   W  + SG+++VKS Y  + E  IN  N  Q       D   +++W L++  +I   
Sbjct: 1008 DRFTWEYSRSGHYSVKSGYWVMTE-IINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHF 1066

Query: 169  AWKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCP---- 336
             W+C+ N +S  S  A        SC       ETV H+   C FA+  W   P P    
Sbjct: 1067 LWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPAPPG 1126

Query: 337  ---VDTHFNPNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQV 507
                ++ F      L V K    ++SD  +  +I   +W +WK R +  F G+  T  QV
Sbjct: 1127 GEWAESLFRNMHHVLSVHKS-QPEESD--HHALIPWILWRLWKNRNDLVFKGREFTAPQV 1183

Query: 508  ALEIQRHLAYWHKEK 552
             L+    +  W+  K
Sbjct: 1184 ILKATEDMDAWNNRK 1198



 Score = 32.3 bits (72), Expect(2) = 1e-12
 Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 9/145 (6%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGG--FKDGRAGPISATSPEEAETLG 775
            KWQ P+ G    N D AW       G   + RN  G   +   RA P S  S  E E   
Sbjct: 1214 KWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALP-SQQSVLETEV-- 1270

Query: 776  FFHAAKWARTKNLSDFS-----VEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCN 940
               A +WA   +LS F+      E D + L+  +  E+        ++   ++   +   
Sbjct: 1271 --EALRWA-VLSLSRFNYRRVIFESDSQYLVSLIQNEM-----DIPSLAPRIQDIRNLLR 1322

Query: 941  NFKD--FYFRPRTANRVIDTLAKEA 1009
            +F++  F F  R  N V D  A+E+
Sbjct: 1323 HFEEVKFQFTRREGNNVADRTARES 1347


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 56.2 bits (134), Expect(2) = 2e-12
 Identities = 50/165 (30%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
 Frame = +2

Query: 596  NSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPIS-ATSPEEAETL 772
            +SKWQ P  G   +N+D A        G   +FR+  G F  G A P    T P+  E L
Sbjct: 661  SSKWQKPDYGWIKINVDGAVFPDKGAIG--AVFRDHQGRFMGGFAKPFPHQTLPKVVEAL 718

Query: 773  GFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMD--EVRQEFSFCNNF 946
            G      W   ++ S   VE DC  ++  +  +    T     I+D  +V Q      + 
Sbjct: 719  GVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLV---DV 775

Query: 947  KDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVD 1081
            +  Y R R+AN     LA  A +F +   W   PP CIL+ L  D
Sbjct: 776  QVVYAR-RSANSAAHCLANGACSFTSLHIWGYTPPQCILSCLHYD 819



 Score = 45.4 bits (106), Expect(2) = 2e-12
 Identities = 40/176 (22%), Positives = 66/176 (37%), Gaps = 7/176 (3%)
 Frame = +1

Query: 1   KEDTLRWLLTNSGNFTVKSMYNKLQ---EKTINNYNLGQPDAF*KKLWSLNISQRIKKIA 171
           +ED + W     G +T +S Y  L+   + T    +    +    +LW +    +I   A
Sbjct: 465 REDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFA 524

Query: 172 WKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEP-CPVDTH 348
           W+  +N + T         D    C     E+ET  H  + C  A+ VWD      +  +
Sbjct: 525 WRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGN 584

Query: 349 FNPNTTFLEVFKEWLG---KDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQV 507
           F         F +WL       D +     L   W +W  R +  ++G+    QQV
Sbjct: 585 FGS-------FVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQV 633


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 53.5 bits (127), Expect(2) = 5e-12
 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 10/169 (5%)
 Frame = +1

Query: 4    EDTLRWLLTNSGNFTVKSMY---NKLQEKTINNYNLGQPDAF*KKLWSLNISQRIKKIAW 174
            ED   W    +G F+VKS Y   N+ +E+T      G   ++ + LW  NI  + K + W
Sbjct: 1003 EDDFTWNFEKNGTFSVKSAYYLINRREEET------GGKGSW-RGLWRKNIPFKYKLLIW 1055

Query: 175  KCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHFN 354
              + N + T    A+   + +P C      IE + H+F  C  A +VW      +  H  
Sbjct: 1056 NGIHNILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVW----IEILKHHK 1111

Query: 355  PNTT---FLEVFKEWLGKDSDIINIEIILTK----IWFIWKERCNRAFD 480
            PN     F   ++EW+  D ++   +  +TK     W IW  R    F+
Sbjct: 1112 PNNQNLFFNLEWEEWI--DFNLNQHDYWVTKFTTAFWHIWCSRNKTVFE 1158



 Score = 47.0 bits (110), Expect(2) = 5e-12
 Identities = 43/154 (27%), Positives = 63/154 (40%), Gaps = 4/154 (2%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISATSPEEAETLGFF 781
            +W+ P  G   LN D AW +    AG   +FR+  G ++ G A  + A SPE AE +   
Sbjct: 1197 RWKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIR 1256

Query: 782  HAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEV----RQEFSFCNNFK 949
               + A   N     VE D K ++  L   L         I+ ++     + +S      
Sbjct: 1257 EGLQVAWDCNYHKLEVECDAKGVVQLLAKPLEAENHPLGVIVMDICILLTRHWSV----- 1311

Query: 950  DFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPP 1051
            +F    R  N+V   LA EA N   +     NPP
Sbjct: 1312 EFLHIKREGNKVAHCLAAEAVNQVEERVIFINPP 1345


>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 888

 Score = 52.4 bits (124), Expect(2) = 5e-12
 Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 14/207 (6%)
 Frame = +1

Query: 7    DTLRWLLTNSGNFTVKSMY----NKLQEKTINNYNLGQP-DAF*KKLWSLNISQRIKKIA 171
            D L W     GN++VK+ Y      +    + + + G P +   KKLW   I  ++   A
Sbjct: 527  DRLTWKQERRGNYSVKTAYWIARAIVMPNALASSSSGDPFEPLWKKLWQSKIPGKVLICA 586

Query: 172  WKCLQNDVSTNSKRARFQSDISPSCAFGCCE-IETVEHIFLHCNFAKAVWDTEPCPVDTH 348
            W+   N + T + R   +    P     C    E + HI   C  AK +    P  +   
Sbjct: 587  WRACNNILPTRA-RLTIKGYTGPVKCVSCPHWYEDIAHIMCACPLAKDILSRGPLKLSAI 645

Query: 349  FNPNTTFLEVFKEWLGKDSDIINIE---IILTKIWFIWKERCNRAFDGQHQTHQQVALEI 519
            ++P    +  FKEW+ + +  ++ E    +L  IW +W+ R N  F  Q     Q A +I
Sbjct: 646  WSP----IFDFKEWMLEQALSLSTEKFAKLLMVIWGLWRNR-NNTFWSQ---KPQFAADI 697

Query: 520  QRHLAYWHKE-----KYLVHKKRLNDR 585
                  W+ E     K LV KK    R
Sbjct: 698  LCGTMAWYYEFVEATKPLVPKKNQQTR 724



 Score = 48.1 bits (113), Expect(2) = 5e-12
 Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 2/166 (1%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPI-SATSPEEAETLGF 778
            +W  P  G   LN+D A++ ++   G   I RN  G      A  + + TSP++ E    
Sbjct: 726  RWSPPAVGVLKLNVDGAFLHNNTDGGIGGILRNSHGHAIAAFAYHLTNVTSPKQVELEAI 785

Query: 779  FHAAKWARTKNLSDFSVEGDCKSLI-DYLNGELSQITWQNQTIMDEVRQEFSFCNNFKDF 955
                +W       D+ ++ DC+ ++ D +  +   + + N  I+ ++    +   N K  
Sbjct: 786  RTGLQWMHKLGYHDYEIQTDCQLVVQDIVATDFLLMEYGN--ILADIHVALNRMRNVK-I 842

Query: 956  YFRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVDKSNV 1093
             F  RT N V   LA  A       EW ++ P  +   L  D +N+
Sbjct: 843  TFAARTTNCVAHRLASFAFEQSNQLEWLDSMPIMLREVLRYDCTNI 888


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 13/191 (6%)
 Frame = +1

Query: 7    DTLRWLLTNSGNFTVKSMY------NKLQEKTINNYNLGQPDAF*KKLWSLNISQRIKKI 168
            D+ +W  T +  +TV+S Y      N  +E+ IN      P    +++W L I+ +IK  
Sbjct: 1343 DSYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEGDVP--LKQEIWRLKITPKIKHF 1400

Query: 169  AWKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVW-------DTE 327
             W+CL   +ST ++         P+C   C   ET+ HI   C++A+ VW          
Sbjct: 1401 IWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFSGSNR 1460

Query: 328  PCPVDTHFNPNTTFLEVFKEWLGKDSDIINIEIILTKIWFIWKERCNRAFDGQHQTHQQV 507
             C  D   N       + +    ++  I+N  +    +W +WK R    F    +   +V
Sbjct: 1461 LCFTD---NLEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQLDRFPWKV 1517

Query: 508  ALEIQRHLAYW 540
            A + ++    W
Sbjct: 1518 AQKAEQEATEW 1528



 Score = 33.1 bits (74), Expect(2) = 2e-11
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 4/158 (2%)
 Frame = +2

Query: 590  NKNSKWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGG-FKDGRAGPISATSPEEAE 766
            +++ +W  P  G    N D  ++          I R+  G     G A    + S  +AE
Sbjct: 1551 SRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSALQAE 1610

Query: 767  TLGFFHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNN- 943
             LGF HA +    +       EGD   L + +N        ++  +++ +  +  F    
Sbjct: 1611 ALGFLHALQMVWIRGYCYVWFEGDNLELTNLIN------KTEDHHLLETLLYDIRFWMTK 1664

Query: 944  --FKDFYFRPRTANRVIDTLAKEAKNFRTDFEWSNNPP 1051
              F    +  R  N   D L K A +  + +E  + PP
Sbjct: 1665 LPFSSIGYVNRERNLAADKLTKYANSMSSLYETFHVPP 1702


>ref|XP_004308707.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 498

 Score = 49.7 bits (117), Expect(2) = 2e-11
 Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 10/177 (5%)
 Frame = +1

Query: 7   DTLRWLLTNSGNFTVKSMYNKLQEKTINNY--NLGQPDAF*---KKLWSLNISQRIKKIA 171
           D + W     G +TVKS Y   +   + N   +    +AF    KKLW   +  ++   A
Sbjct: 135 DRVIWKPEKRGFYTVKSAYWIARSTVMPNALASTSSGNAFLPLWKKLWKARVPGKVMHCA 194

Query: 172 WKCLQNDVSTNSKRARFQSDISPSCAFGCCEIETVEHIFLHCNFAKAVWDTEPCPVDTHF 351
           W+   + + T +K      + +  C       ET  H+   C  A+ +       + +H 
Sbjct: 195 WRACHDLLPTRAKLVTKGYEGTLKCLSCPHPCETTAHLVCACPIAQTIL------LGSHL 248

Query: 352 NPNTTFLEVF--KEWLGKDSDIIN---IEIILTKIWFIWKERCNRAFDGQHQTHQQV 507
           N       +F  KEW+ + +  ++    + +L  IW +W+ R N  +  + QT Q++
Sbjct: 249 NITVLMSSIFNFKEWMLEQATSLSDDKFQKLLMIIWGLWRNRNNMLWSDKQQTAQEI 305



 Score = 48.5 bits (114), Expect(2) = 2e-11
 Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)
 Frame = +2

Query: 602  KWQFPTPGHNTLNLDVAWISSSVPAGYAIIFRNDAGGFKDGRAGPISA-TSPEEAETLGF 778
            KW  P   H  LN+D A++ +    G   I R++ G         IS   S  +AE    
Sbjct: 334  KWFPPAVDHLKLNVDGAFMPNETEGGVGGILRDNQGIVVAAFTKHISGINSANQAELKAI 393

Query: 779  FHAAKWARTKNLSDFSVEGDCKSLIDYLNGELSQITWQNQTIMDEVRQEFSFCNNFKDFY 958
                 W +T N  +  +E DC+  ++ +  +   I+ +   I+D++ +       F D Y
Sbjct: 394  RAGLIWLKTYNFHNCILETDCQVAVNEVQLQ-DYISLEYGNIIDDIHE---LLEGFDDVY 449

Query: 959  --FRPRTANRVIDTLAKEAKNFRTDFEWSNNPPSCILNDLEVDKSNV 1093
              F PRTA      LA +A       +W +  P  + + L+ D +N+
Sbjct: 450  ISFAPRTAKAAAHRLASDAFESVGYVQWMDAIPYMLRDTLKHDCNNI 496