BLASTX nr result

ID: Papaver27_contig00020509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00020509
         (1329 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27412.3| unnamed protein product [Vitis vinifera]              780   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   780   0.0  
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   772   0.0  
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   769   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   769   0.0  
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   764   0.0  
emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]         764   0.0  
emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]      764   0.0  
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   763   0.0  
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   762   0.0  
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   761   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   761   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...   760   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...   760   0.0  
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi...   760   0.0  
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   759   0.0  
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   759   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   759   0.0  
sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras...   759   0.0  
ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   759   0.0  

>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  780 bits (2013), Expect = 0.0
 Identities = 379/439 (86%), Positives = 409/439 (93%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 375  KMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 434

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++A GGVDKLSYEGR+AFTE++L++IFDSADRPLEG +WWL AEDPFQCLA C+NLSEA
Sbjct: 435  NVYA-GGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEA 493

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPETTISH+PVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA RV 
Sbjct: 494  LRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 553

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IMQ DAQKDPA + N LRA+LLI +  V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 554  DIMQRDAQKDPATEPNALRARLLISQ--VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 611

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    +E E F  +CYAAK TLTALGEMFEAARSIMSWLGDCAKVIA +NHPVRW TPLG
Sbjct: 612  RCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLG 671

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVL+LQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 672  LPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 731

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            ++AGLNFAGVHDSYWTHACDVDEMNRILREKFVELY  PILENLL  FQ+SFPTL FPPL
Sbjct: 732  QKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPL 791

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 792  PERGDFDLREVLESPYFFN 810


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  780 bits (2013), Expect = 0.0
 Identities = 379/439 (86%), Positives = 409/439 (93%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 543  KMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 602

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++A GGVDKLSYEGR+AFTE++L++IFDSADRPLEG +WWL AEDPFQCLA C+NLSEA
Sbjct: 603  NVYA-GGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEA 661

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPETTISH+PVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA RV 
Sbjct: 662  LRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 721

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IMQ DAQKDPA + N LRA+LLI +  V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 722  DIMQRDAQKDPATEPNALRARLLISQ--VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 779

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    +E E F  +CYAAK TLTALGEMFEAARSIMSWLGDCAKVIA +NHPVRW TPLG
Sbjct: 780  RCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLG 839

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVL+LQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 840  LPVVQPYRKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 899

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            ++AGLNFAGVHDSYWTHACDVDEMNRILREKFVELY  PILENLL  FQ+SFPTL FPPL
Sbjct: 900  QKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPL 959

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 960  PERGDFDLREVLESPYFFN 978


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  772 bits (1993), Expect = 0.0
 Identities = 373/439 (84%), Positives = 410/439 (93%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGL WLKIHLA
Sbjct: 541  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLA 600

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY+GR+AFTE++L+ IFDSADRPLEG +WWL AEDPFQCLAVCMNL+EA
Sbjct: 601  NLYA-GGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEA 659

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPETTISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY+GIA RV 
Sbjct: 660  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVL 719

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DAQKDP+ D +V RA+L++++  V+RKLVKQTVMTSVYGVTY+GARDQIK+RLKE
Sbjct: 720  EIMRMDAQKDPSIDPDVARARLIVDQ--VDRKLVKQTVMTSVYGVTYVGARDQIKRRLKE 777

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    +EAE FG +CYAAKVTLTALGEMF+AAR IM+WLGDCAKVIA +N PVRWTTPLG
Sbjct: 778  RGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLG 837

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 838  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 897

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 898  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPL 957

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF++KEVLESPYFFN
Sbjct: 958  PERGDFDMKEVLESPYFFN 976


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  770 bits (1987), Expect = 0.0
 Identities = 373/439 (84%), Positives = 408/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KM+ EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLA
Sbjct: 561  KMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 620

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSYEGRIAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLA C+NLSEA
Sbjct: 621  NLYA-GGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEA 679

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPETTISH+PVHQDGSCNGLQHYAALGRD+LGAA+VNLVAGEKPADVYSGIA RV 
Sbjct: 680  LRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVV 739

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA+KDPA + + L A+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 740  DIMRRDAEKDPAINPHALHARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 797

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  +CYAA+ TLTALGEMF+AARSIM+WLG+CAKVI+ +N PVRW TPLG
Sbjct: 798  RCAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVISSENQPVRWVTPLG 857

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVM KRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 858  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMAKRQRTAFPPNFVHSLDGSHMMMTAVAC 917

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K+AGLNFAGVHDSYWTHACDVDEMNRILREKFVELYE PILENLL SFQ+SFP+L FPPL
Sbjct: 918  KKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLESFQKSFPSLNFPPL 977

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 978  PERGDFDLREVLESPYFFN 996


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  770 bits (1987), Expect = 0.0
 Identities = 373/439 (84%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGL WLKIHLA
Sbjct: 600  KMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLA 659

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NLFA GGVDKLS+EGRI FTE++LD+IFDSADRPLEG +WWL AEDPFQ LA C+NLSEA
Sbjct: 660  NLFA-GGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEA 718

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPETTISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA RV 
Sbjct: 719  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVL 778

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA+KDPA   + LRA++LI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 779  DIMKRDAEKDPAIFPDALRARILI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 836

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R+   ++ E FG ACYAAK+TLTALGEMF+AARSIMSWLGDCAK+IA +N PVRWTTPLG
Sbjct: 837  RNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLG 896

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRET+ +MVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 897  LPVVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 956

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K+AGLNFAGVHDSYWTHACDVDEMNR+LREKFV+LYE PILENLL SFQ+SFP LEFPPL
Sbjct: 957  KKAGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPL 1016

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 1017 PERGDFDLREVLESPYFFN 1035


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  764 bits (1973), Expect = 0.0
 Identities = 367/439 (83%), Positives = 408/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLA
Sbjct: 567  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLA 626

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E++L++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 627  NVYG-GGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 685

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD+LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 686  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 745

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIKKRLKE
Sbjct: 746  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 803

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 804  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 863

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 864  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 923

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 924  KESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 984  PERGDFDLREVLESPYFFN 1002


>emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum]
          Length = 1002

 Score =  764 bits (1973), Expect = 0.0
 Identities = 367/439 (83%), Positives = 408/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLA
Sbjct: 567  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLA 626

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E++L++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 627  NVYG-GGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 685

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD+LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 686  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 745

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIKKRLKE
Sbjct: 746  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 803

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 804  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 863

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 864  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 923

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 924  KESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 984  PERGDFDLREVLESPYFFN 1002


>emb|CAC95022.1| mitochondrial RNA polymerase [Nicotiana tabacum]
          Length = 715

 Score =  764 bits (1973), Expect = 0.0
 Identities = 367/439 (83%), Positives = 408/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLG SGLRWLKIHLA
Sbjct: 280  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGTSGLRWLKIHLA 339

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E++L++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 340  NVYG-GGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 398

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD+LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 399  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 458

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIKKRLKE
Sbjct: 459  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 516

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 517  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 576

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 577  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 636

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHACDVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 637  KESGLSFAGVHDSYWTHACDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 696

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 697  PERGDFDLREVLESPYFFN 715


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score =  763 bits (1971), Expect = 0.0
 Identities = 366/439 (83%), Positives = 409/439 (93%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLA
Sbjct: 404  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 463

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY+GRIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EA
Sbjct: 464  NLYA-GGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEA 522

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY+GIA RV 
Sbjct: 523  LRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVL 582

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DA KDPA D +  RA++L+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKE
Sbjct: 583  EIMRNDALKDPATDPDAARARMLVDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 640

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            RD  G+++E F  +CYAAKVTLTALGEMF+AARSIM+WLGDCAK+IA +N PV+WTTPLG
Sbjct: 641  RDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIACENEPVKWTTPLG 700

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 701  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 760

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 761  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLGSFEKSFPELKFPPL 820

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+LK+VL SPYFFN
Sbjct: 821  PERGDFDLKDVLGSPYFFN 839


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  762 bits (1968), Expect = 0.0
 Identities = 370/439 (84%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 154  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 213

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NLFA GGVDKLSY+GRIAFTE++LD+IFDSADRPLEG +WWL AEDPFQCLAVC++L+EA
Sbjct: 214  NLFA-GGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAEDPFQCLAVCIDLTEA 272

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPET ISH+P+HQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA RV 
Sbjct: 273  LRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAVRVL 332

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM++DAQKDP    + L AK+LI +  V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 333  DIMRKDAQKDPKVFPDALHAKILISQ--VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 390

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  +CYAAKVTLTALGEMFEAARSIMSWLG+CAK+IA +N PVRWTTPLG
Sbjct: 391  RGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLG 450

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR  GRHLIKTSLQVLTLQ+ET+KVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ C
Sbjct: 451  LPVVQPYRNFGRHLIKTSLQVLTLQQETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVTC 510

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KRAGLNFAGVHDSYWTHACDVD+MNRILREKFVELYE P+LENLL SFQ+SFPTL FPPL
Sbjct: 511  KRAGLNFAGVHDSYWTHACDVDKMNRILREKFVELYETPVLENLLESFQQSFPTLSFPPL 570

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L++VL+SPYFFN
Sbjct: 571  PERGDFDLQDVLKSPYFFN 589


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  761 bits (1966), Expect = 0.0
 Identities = 366/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLG+SGLRWLKIHLA
Sbjct: 570  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGESGLRWLKIHLA 629

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY GRIAF E++L+ IFDSADRPLEG +WWL AEDPFQCLAVCMNL+EA
Sbjct: 630  NLYA-GGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEA 688

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPE TISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVYSGIA RV 
Sbjct: 689  LRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVV 748

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ D+QKDP+ D +  RA+L++++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKE
Sbjct: 749  EIMRRDSQKDPSTDPDAARARLILDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 806

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++AE FG +CYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PV+WTTPLG
Sbjct: 807  RGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVKWTTPLG 866

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 867  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 926

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 927  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPL 986

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF++K+VLESPYFFN
Sbjct: 987  PERGDFDMKDVLESPYFFN 1005


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  761 bits (1964), Expect = 0.0
 Identities = 370/439 (84%), Positives = 403/439 (91%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSD+CRGILEF EGRPLGKSGL WLKIHLA
Sbjct: 589  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLA 648

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLS EGRIAFTE++LD+IFDS D+PLEG +WWLKAEDPFQCLAVC+NL+EA
Sbjct: 649  NLYA-GGVDKLSLEGRIAFTENHLDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEA 707

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPET ISHIPVHQDGSCNGLQHYAALGRD+LGAA+VNLV GEKPADVYSGIA RV 
Sbjct: 708  LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVL 767

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DAQKDP      LRAKLLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 768  EIMRRDAQKDPVVFPEALRAKLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 825

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++AE FG ACYAAK+TLTALGEMFEAAR IMSWLG+CAK+IA +N PVRWTTPLG
Sbjct: 826  RGSISDDAEIFGCACYAAKITLTALGEMFEAARGIMSWLGECAKIIASENQPVRWTTPLG 885

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+ GRHLIKTSLQVLTLQRET+KVMVKRQ+TAFPPNFVHSLD SHMMMTA+AC
Sbjct: 886  LPVVQPYRKFGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIAC 945

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K+AGL+FAGVHDSYWTHACDVDEMN+ILREKFV+LYE PILENLL SFQ+SFP L FPPL
Sbjct: 946  KKAGLSFAGVHDSYWTHACDVDEMNKILREKFVQLYETPILENLLESFQQSFPALTFPPL 1005

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L++VLESPYFFN
Sbjct: 1006 PERGDFDLRDVLESPYFFN 1024


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score =  760 bits (1963), Expect = 0.0
 Identities = 368/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLA
Sbjct: 582  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 641

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY+GRIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EA
Sbjct: 642  NLYA-GGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEA 700

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY+GIA RV 
Sbjct: 701  LRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVV 760

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DA KDPA D +  RA+LL+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKE
Sbjct: 761  EIMKNDALKDPATDPDAARARLLLDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 818

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            RD   +++E F  +CYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PVRWTTPLG
Sbjct: 819  RDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLG 878

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 879  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 938

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 939  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 998

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L +VL SPYFFN
Sbjct: 999  PERGDFDLTDVLGSPYFFN 1017


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score =  760 bits (1963), Expect = 0.0
 Identities = 368/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLA
Sbjct: 548  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 607

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY+GRIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EA
Sbjct: 608  NLYA-GGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEA 666

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY+GIA RV 
Sbjct: 667  LRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVV 726

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DA KDPA D +  RA+LL+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKE
Sbjct: 727  EIMKNDALKDPATDPDAARARLLLDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 784

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            RD   +++E F  +CYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PVRWTTPLG
Sbjct: 785  RDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLG 844

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 845  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 904

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 905  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 964

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L +VL SPYFFN
Sbjct: 965  PERGDFDLTDVLGSPYFFN 983


>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
          Length = 845

 Score =  760 bits (1963), Expect = 0.0
 Identities = 368/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLA
Sbjct: 410  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLA 469

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLSY+GRIAFTE++L++IFDSADRPLEG +WWL AEDPFQCLAVC+NL+EA
Sbjct: 470  NLYA-GGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEA 528

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNLVAGEKPADVY+GIA RV 
Sbjct: 529  LRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVV 588

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            EIM+ DA KDPA D +  RA+LL+++  V+RKLVKQTVMTSVYGVTY+GAR+QIK+RLKE
Sbjct: 589  EIMKNDALKDPATDPDAARARLLLDQ--VDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 646

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            RD   +++E F  +CYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA +N PVRWTTPLG
Sbjct: 647  RDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLG 706

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQVLTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 707  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 766

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KR GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+ PILENLL SF++SFP L+FPPL
Sbjct: 767  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 826

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L +VL SPYFFN
Sbjct: 827  PERGDFDLTDVLGSPYFFN 845


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  759 bits (1961), Expect = 0.0
 Identities = 365/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 567  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 626

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E+++++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 627  NVYG-GGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 685

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 686  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVL 745

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 746  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 803

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 804  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 863

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 864  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 923

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 924  KESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 984  PERGDFDLREVLESPYFFN 1002


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  759 bits (1961), Expect = 0.0
 Identities = 365/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 567  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 626

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E+++++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 627  NVYG-GGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 685

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 686  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVL 745

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 746  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 803

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 804  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 863

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 864  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 923

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 924  KESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 984  PERGDFDLREVLESPYFFN 1002


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  759 bits (1961), Expect = 0.0
 Identities = 365/439 (83%), Positives = 406/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EGRPLGKSGLRWLKIHLA
Sbjct: 558  KMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLRWLKIHLA 617

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR AF+E+++++IFDSADRPLEG +WWL AEDPFQCLA C+N+SEA
Sbjct: 618  NVYG-GGVDKLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEA 676

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET+ISH+P+HQDGSCNGLQHYAALGRD+LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 677  LRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVL 736

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 737  DIMKRDADKDPATDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 794

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++N PVRWTTPLG
Sbjct: 795  RGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENQPVRWTTPLG 854

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+ C
Sbjct: 855  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAITC 914

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K AGL+FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 915  KEAGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 974

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 975  PERGDFDLREVLESPYFFN 993


>sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName:
            Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 1; Flags: Precursor
            gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  759 bits (1961), Expect = 0.0
 Identities = 365/439 (83%), Positives = 407/439 (92%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK EDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 567  KMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 626

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            N++  GGVDKLSYEGR+AF+E+++++IFDSA+RPLEG +WWL AEDPFQCLA C+N++EA
Sbjct: 627  NVYG-GGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAEDPFQCLATCINIAEA 685

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRS SPET IS++P+HQDGSCNGLQHYAALGRD LGAAAVNLVAG+KPADVYSGIA RV 
Sbjct: 686  LRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAGDKPADVYSGIAARVL 745

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
            +IM+ DA KDPA D NV+RA+LLI  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 746  DIMKRDAAKDPANDPNVMRARLLI--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 803

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    ++ E F  ACYAAK TLTALGEMFEAARSIMSWLGDCAK+IA++NHPVRWTTPLG
Sbjct: 804  RGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIAMENHPVRWTTPLG 863

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+LGRHLIKTSLQ+LTLQRETDKVMVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 864  LPVVQPYRKLGRHLIKTSLQILTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAIAC 923

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            K +GL+FAGVHDSYWTHA DVD+MN+ILREKFVELY+ PILENLL SFQ+SFP L+FPPL
Sbjct: 924  KESGLSFAGVHDSYWTHASDVDQMNKILREKFVELYDAPILENLLESFQQSFPDLQFPPL 983

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF+L+EVLESPYFFN
Sbjct: 984  PERGDFDLREVLESPYFFN 1002


>ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Fragaria vesca subsp.
            vesca]
          Length = 1262

 Score =  759 bits (1959), Expect = 0.0
 Identities = 372/439 (84%), Positives = 403/439 (91%)
 Frame = +1

Query: 1    KMKAEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 180
            KMK E+GFY+PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA
Sbjct: 828  KMKDEEGFYFPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLA 887

Query: 181  NLFAAGGVDKLSYEGRIAFTESNLDNIFDSADRPLEGNKWWLKAEDPFQCLAVCMNLSEA 360
            NL+A GGVDKLS EGR+AFTE++LD+IFDS DRPLEG +WWLKAEDPFQCLAVC+NL+EA
Sbjct: 888  NLYA-GGVDKLSLEGRLAFTENHLDDIFDSMDRPLEGRRWWLKAEDPFQCLAVCINLTEA 946

Query: 361  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIADRVR 540
            LRSSSPET ISHIPVHQDGSCNGLQHYAALGRD+LGAAAVNLVAGEKPADVYSGIA RV 
Sbjct: 947  LRSSSPETFISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVL 1006

Query: 541  EIMQEDAQKDPAADSNVLRAKLLIERNWVNRKLVKQTVMTSVYGVTYIGARDQIKKRLKE 720
             IMQ DAQKDP    + LRA++L+  N V+RKLVKQTVMTSVYGVTYIGARDQIK+RLKE
Sbjct: 1007 NIMQSDAQKDPEVFPDALRARVLV--NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKE 1064

Query: 721  RDPSGEEAEQFGLACYAAKVTLTALGEMFEAARSIMSWLGDCAKVIALKNHPVRWTTPLG 900
            R    E+ + FG ACYAAKVTL ALG+MFEAARSIMSWLGDCAK+IA +N  VRWTTPLG
Sbjct: 1065 RGAISED-DVFGCACYAAKVTLAALGQMFEAARSIMSWLGDCAKIIASENETVRWTTPLG 1123

Query: 901  LPVVQPYRQLGRHLIKTSLQVLTLQRETDKVMVKRQKTAFPPNFVHSLDGSHMMMTALAC 1080
            LPVVQPYR+ GRHLIKTSLQ+LTLQRET+K+MVKRQ+TAFPPNFVHSLDGSHMMMTA+AC
Sbjct: 1124 LPVVQPYRKYGRHLIKTSLQILTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 1183

Query: 1081 KRAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYEQPILENLLASFQESFPTLEFPPL 1260
            KRAGLNFAGVHDSYWTHACDVD MNRILREKFVELYE PILE LL SFQ+SFPTL FPPL
Sbjct: 1184 KRAGLNFAGVHDSYWTHACDVDVMNRILREKFVELYETPILERLLESFQQSFPTLTFPPL 1243

Query: 1261 PERGDFNLKEVLESPYFFN 1317
            PERGDF L++VLESPYFFN
Sbjct: 1244 PERGDFELRDVLESPYFFN 1262


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