BLASTX nr result

ID: Papaver27_contig00020508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00020508
         (460 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A...   258   6e-67
emb|CBL87031.1| RNA polymerase [Nuphar advena]                        257   1e-66
emb|CBI27412.3| unnamed protein product [Vitis vinifera]              256   2e-66
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   256   2e-66
emb|CBL69149.1| RNA polymerase [Nuphar advena]                        256   2e-66
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   256   2e-66
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   252   3e-65
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]         252   3e-65
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   252   4e-65
ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   251   6e-65
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   250   1e-64
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   249   2e-64
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m...   249   2e-64
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   249   3e-64
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   249   3e-64
ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theob...   249   3e-64
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   249   3e-64
sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras...   249   4e-64
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu...   248   6e-64
ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   248   6e-64

>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
            gi|548846502|gb|ERN05778.1| hypothetical protein
            AMTR_s00006p00254180 [Amborella trichopoda]
          Length = 1006

 Score =  258 bits (659), Expect = 6e-67
 Identities = 123/152 (80%), Positives = 142/152 (93%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++L++IFDSAD+PLEG +WWLGAEDPFQCLA C+NLSEALRSSSP+TTISH+P+HQDGSC
Sbjct: 651  NHLEDIFDSADRPLEGGRWWLGAEDPFQCLAACVNLSEALRSSSPDTTISHMPVHQDGSC 710

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGA AVNLVAGEKPADVYSGIA+RV +IM+ DSQKDP +DPNV RAK
Sbjct: 711  NGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIAERVLDIMRRDSQKDPTSDPNVARAK 770

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +L+ +  V+RKLVKQTVMTSVYGVTY+GARDQ
Sbjct: 771  LLLNQ--VDRKLVKQTVMTSVYGVTYVGARDQ 800


>emb|CBL87031.1| RNA polymerase [Nuphar advena]
          Length = 990

 Score =  257 bits (656), Expect = 1e-66
 Identities = 125/152 (82%), Positives = 141/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD+IFDSADKPLEG++WWLGAEDPFQCLA C+NLSEALRSSSP+TTISH+P+HQDGSC
Sbjct: 642  NHLDDIFDSADKPLEGSRWWLGAEDPFQCLAACINLSEALRSSSPDTTISHVPVHQDGSC 701

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIA  V EIM+ DSQKDPA +P+  RA+
Sbjct: 702  NGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIASGVLEIMRRDSQKDPANNPSAVRAR 761

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI  D V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 762  LLI--DQVDRKLVKQTVMTSVYGVTYIGARDQ 791


>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  256 bits (655), Expect = 2e-66
 Identities = 124/152 (81%), Positives = 140/152 (92%)
 Frame = +3

Query: 3   SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
           ++L++IFDSAD+PLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+P+HQDGSC
Sbjct: 455 NHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSC 514

Query: 183 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
           NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IMQ D+QKDPA +PN  RA+
Sbjct: 515 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRAR 574

Query: 363 MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
           +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 575 LLISQ--VDRKLVKQTVMTSVYGVTYIGARDQ 604


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  256 bits (655), Expect = 2e-66
 Identities = 124/152 (81%), Positives = 140/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++L++IFDSAD+PLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+P+HQDGSC
Sbjct: 623  NHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSC 682

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IMQ D+QKDPA +PN  RA+
Sbjct: 683  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRAR 742

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 743  LLISQ--VDRKLVKQTVMTSVYGVTYIGARDQ 772


>emb|CBL69149.1| RNA polymerase [Nuphar advena]
          Length = 996

 Score =  256 bits (654), Expect = 2e-66
 Identities = 124/152 (81%), Positives = 142/152 (93%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD+IFDS+D+PLEG++WWLGAEDPFQCLA C+NLS+ALRSSSPETTISH+PIHQDGSC
Sbjct: 642  NHLDDIFDSSDRPLEGSRWWLGAEDPFQCLAACINLSDALRSSSPETTISHVPIHQDGSC 701

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA+RV +IM+ DSQKDP  +P+  RA+
Sbjct: 702  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAERVFDIMRRDSQKDPTNNPSAARAR 761

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI  D V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 762  LLI--DQVDRKLVKQTVMTSVYGVTYIGARDQ 791


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  256 bits (654), Expect = 2e-66
 Identities = 123/152 (80%), Positives = 141/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++L+ IFDSAD+PLEG +WWLGAEDPFQCLAVCMNL+EALRSSSPETTISHIP+HQDGSC
Sbjct: 621  NHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSC 680

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ D+QKDP+ DP+V RA+
Sbjct: 681  NGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARAR 740

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +++  D V+RKLVKQTVMTSVYGVTY+GARDQ
Sbjct: 741  LIV--DQVDRKLVKQTVMTSVYGVTYVGARDQ 770


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  252 bits (644), Expect = 3e-65
 Identities = 121/152 (79%), Positives = 140/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            +++++IFDSAD+PLEG +WWLGAEDPFQCLA C+N+SEALRS SPET+ISH+PIHQDGSC
Sbjct: 638  NHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCINISEALRSPSPETSISHMPIHQDGSC 697

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIA RV +IM+ D+ KDPA DPNV RA+
Sbjct: 698  NGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRAR 757

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 758  LLINQ--VDRKLVKQTVMTSVYGVTYIGARDQ 787


>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
          Length = 975

 Score =  252 bits (644), Expect = 3e-65
 Identities = 120/152 (78%), Positives = 141/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++L+ IFDSAD+PLEG +WWLGAEDPFQCLAVCMNL+EALRSSSPETTISHIP+HQDGSC
Sbjct: 620  NHLEEIFDSADRPLEGRRWWLGAEDPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSC 679

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALG+DKLGA AVNLVAGEKPADVY+GIA+RV EIM+ D+QKDP+ +P+  RA+
Sbjct: 680  NGLQHYAALGKDKLGAIAVNLVAGEKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARAR 739

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +++  D V+RKLVKQTVMTSVYGVTYIGAR+Q
Sbjct: 740  LIV--DQVDRKLVKQTVMTSVYGVTYIGAREQ 769


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  252 bits (643), Expect = 4e-65
 Identities = 121/152 (79%), Positives = 138/152 (90%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++L+ IFDSAD+PLEG +WWLGAEDPFQCLAVCMNL+EALRS SPE TISHIP+HQDGSC
Sbjct: 650  NHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSC 709

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGA AVNLVAGEKPADVYSGIA RV EIM+ DSQKDP+ DP+  RA+
Sbjct: 710  NGLQHYAALGRDKLGAIAVNLVAGEKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARAR 769

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +++  D V+RKLVKQTVMTSVYGVTY+GAR+Q
Sbjct: 770  LIL--DQVDRKLVKQTVMTSVYGVTYVGAREQ 799


>ref|XP_006338320.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Solanum tuberosum]
          Length = 1019

 Score =  251 bits (642), Expect = 6e-65
 Identities = 123/152 (80%), Positives = 138/152 (90%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            S+LD+IFDSADKPLEG +WWL AEDPFQCLAVC+NLSEA+RSSSPET ISHIP+HQDGSC
Sbjct: 664  SHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHIPVHQDGSC 723

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IM  D+Q+DPA  P+  RA+
Sbjct: 724  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRAR 783

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +L+ +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 784  VLVNQ--VDRKLVKQTVMTSVYGVTYIGARDQ 813


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  250 bits (639), Expect = 1e-64
 Identities = 120/152 (78%), Positives = 140/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            +++++IFDSAD+PLEG +WWLGAEDPFQCLA C+++SEALRS SPET+ISH+PIHQDGSC
Sbjct: 638  NHVEDIFDSADRPLEGRRWWLGAEDPFQCLATCISISEALRSPSPETSISHMPIHQDGSC 697

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAG+KPADVYSGIA RV +IM+ D+ KDPA DPNV RA+
Sbjct: 698  NGLQHYAALGRDKLGAAAVNLVAGDKPADVYSGIAARVLDIMKRDADKDPATDPNVMRAR 757

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 758  LLINQ--VDRKLVKQTVMTSVYGVTYIGARDQ 787


>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Solanum lycopersicum]
          Length = 1022

 Score =  249 bits (637), Expect = 2e-64
 Identities = 122/152 (80%), Positives = 137/152 (90%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            S+LD+IFDSADKPLEG  WWL AEDPFQCLAVC+NLSEA+RSSSPET ISH+P+HQDGSC
Sbjct: 667  SHLDDIFDSADKPLEGRCWWLNAEDPFQCLAVCINLSEAVRSSSPETVISHVPVHQDGSC 726

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IM  D+Q+DPA  P+  RA+
Sbjct: 727  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDAQRDPAEFPDAVRAR 786

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +L+ +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 787  VLVNQ--VDRKLVKQTVMTSVYGVTYIGARDQ 816


>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
            DNA-directed RNA polymerase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 997

 Score =  249 bits (637), Expect = 2e-64
 Identities = 121/152 (79%), Positives = 136/152 (89%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD IFDSAD+PLEG +WWLGAEDPFQCLA C NL+EA RSSSPETTISH+PIHQDGSC
Sbjct: 642  NHLDYIFDSADRPLEGRRWWLGAEDPFQCLATCFNLAEAFRSSSPETTISHMPIHQDGSC 701

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLV+GEKPADVYSGIA RV +IM+ D++KDP  +PN   AK
Sbjct: 702  NGLQHYAALGRDKLGAAAVNLVSGEKPADVYSGIAARVLDIMRTDAEKDPGTNPNALHAK 761

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 762  LLINE--VDRKLVKQTVMTSVYGVTYIGARDQ 791


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           isoform X2 [Oryza brachyantha]
          Length = 839

 Score =  249 bits (636), Expect = 3e-64
 Identities = 120/152 (78%), Positives = 138/152 (90%)
 Frame = +3

Query: 3   SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
           ++L++IFDSAD+PLEG +WWLGAEDPFQCLAVC+NL+EALRS SPET ISHIP+HQDGSC
Sbjct: 484 NHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSC 543

Query: 183 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
           NGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ D+ KDPA DP+  RA+
Sbjct: 544 NGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARAR 603

Query: 363 MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
           ML+  D V+RKLVKQTVMTSVYGVTY+GAR+Q
Sbjct: 604 MLV--DQVDRKLVKQTVMTSVYGVTYVGAREQ 633


>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
           isoform X1 [Oryza brachyantha]
          Length = 703

 Score =  249 bits (636), Expect = 3e-64
 Identities = 120/152 (78%), Positives = 138/152 (90%)
 Frame = +3

Query: 3   SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
           ++L++IFDSAD+PLEG +WWLGAEDPFQCLAVC+NL+EALRS SPET ISHIP+HQDGSC
Sbjct: 457 NHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSC 516

Query: 183 NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
           NGLQHYAALGRDKLGA AVNLVAGEKPADVY+GIA RV EIM+ D+ KDPA DP+  RA+
Sbjct: 517 NGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRNDALKDPATDPDAARAR 576

Query: 363 MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
           ML+  D V+RKLVKQTVMTSVYGVTY+GAR+Q
Sbjct: 577 MLV--DQVDRKLVKQTVMTSVYGVTYVGAREQ 606


>ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508709658|gb|EOY01555.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 932

 Score =  249 bits (636), Expect = 3e-64
 Identities = 120/152 (78%), Positives = 139/152 (91%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD+IFDSAD+PLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+P+HQDGSC
Sbjct: 641  NHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSC 700

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIA RV +IM+ D++KDPA +P+   A+
Sbjct: 701  NGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHAR 760

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 761  LLINQ--VDRKLVKQTVMTSVYGVTYIGARDQ 790


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  249 bits (636), Expect = 3e-64
 Identities = 120/152 (78%), Positives = 139/152 (91%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD+IFDSAD+PLEG +WWL AEDPFQCLA C+NLSEALRSSSPETTISH+P+HQDGSC
Sbjct: 641  NHLDDIFDSADRPLEGRRWWLSAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSC 700

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAA+VNLVAGEKPADVYSGIA RV +IM+ D++KDPA +P+   A+
Sbjct: 701  NGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVVDIMRRDAEKDPAINPHALHAR 760

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 761  LLINQ--VDRKLVKQTVMTSVYGVTYIGARDQ 790


>sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score =  249 bits (635), Expect = 4e-64
 Identities = 119/152 (78%), Positives = 140/152 (92%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            +++D+IFDS+DKPLEG +WWL AEDPFQCLAVC+NLSEA+RSSSPET++SHIP+HQDGSC
Sbjct: 665  NHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSC 724

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIA RV +IM+ D+Q+DPA  P+  RA+
Sbjct: 725  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRAR 784

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +L+ +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 785  VLVNQ--VDRKLVKQTVMTSVYGVTYIGARDQ 814


>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
            gi|550332836|gb|EEE88785.2| hypothetical protein
            POPTR_0008s11200g [Populus trichocarpa]
          Length = 988

 Score =  248 bits (633), Expect = 6e-64
 Identities = 120/152 (78%), Positives = 135/152 (88%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            ++LD+IFDSAD+PLEG +WWLGAEDPFQCLA C+NLSEALRS SPET  SH P+HQDGSC
Sbjct: 633  NHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRSPSPETATSHTPVHQDGSC 692

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLV GEKPADVYSGIA RV +IMQ D++KDPA +PN   AK
Sbjct: 693  NGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIATRVLDIMQRDAEKDPAINPNSVHAK 752

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +L+ +  V+RKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 753  LLVNQ--VDRKLVKQTVMTSVYGVTYIGARDQ 782


>ref|XP_004297187.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 997

 Score =  248 bits (633), Expect = 6e-64
 Identities = 119/152 (78%), Positives = 137/152 (90%)
 Frame = +3

Query: 3    SNLDNIFDSADKPLEGNQWWLGAEDPFQCLAVCMNLSEALRSSSPETTISHIPIHQDGSC 182
            +++D IFDSAD+PLEG +WWLGAEDPFQCLA C+NL+EALRS SPETTIS++P+HQDGSC
Sbjct: 642  NHVDEIFDSADRPLEGRRWWLGAEDPFQCLAACINLTEALRSPSPETTISYMPVHQDGSC 701

Query: 183  NGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIADRVREIMQEDSQKDPAADPNVFRAK 362
            NGLQHYAALGRDKLGAAAVNLV GEKPADVYSGIA RV +IM+ D++KDPA +PN   A+
Sbjct: 702  NGLQHYAALGRDKLGAAAVNLVGGEKPADVYSGIAARVLDIMRTDAEKDPAINPNTLHAR 761

Query: 363  MLIEKDWVNRKLVKQTVMTSVYGVTYIGARDQ 458
            +LI +  VNRKLVKQTVMTSVYGVTYIGARDQ
Sbjct: 762  LLINE--VNRKLVKQTVMTSVYGVTYIGARDQ 791


Top