BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00018102
         (3835 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...  1638   0.0  
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...  1636   0.0  
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...  1631   0.0  
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...  1627   0.0  
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...  1618   0.0  
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...  1615   0.0  
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...  1605   0.0  
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...  1589   0.0  
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub...  1574   0.0  
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer...  1569   0.0  
emb|CBI35100.3| unnamed protein product [Vitis vinifera]             1568   0.0  
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...  1550   0.0  
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...  1546   0.0  
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...  1544   0.0  
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...  1543   0.0  
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...  1517   0.0  
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...  1513   0.0  
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab...  1503   0.0  
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana...  1499   0.0  
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps...  1489   0.0  

>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score = 1638 bits (4241), Expect = 0.0
 Identities = 812/1166 (69%), Positives = 949/1166 (81%), Gaps = 4/1166 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            +FE LRELFK HIESFDY++D GL+ +L +IKPVEV ++ T   LRIW DN  L  P+K 
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3479 --AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNL 3306
              ++ +R+ + P+ECRQAK SYSG++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129

Query: 3305 RKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDK 3126
            R A+P KLVS+KEEA+EMGGYFIL GLER++R++I+ KRN+P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189

Query: 3125 AVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSL 2946
            AVVIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKALIDT D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 2945 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETE 2766
            T C+NE ++KGKG VGTQLVGER KIILDE+R LSL T+ QCL Y+GE F+PVM  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKND 309

Query: 2765 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 2586
            S  I+ D VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 2585 HLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENL 2406
            HLITLYLK+                   KS  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 2405 LIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 2226
            L  G L +Q+GLDL QR G+T+QAERLNFLRF+SHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2225 WGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 2046
            WGFLCPVHTPDGEPCGLLNH+T T RITS++DS G +KD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL 549

Query: 2045 PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 1866
            PK+   GPPE + VLLDGCVVG I+S+ VEK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM 609

Query: 1865 GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNF 1686
            GGAYPGLYL TSPSRFVRPVRNISI S+ ++NIELIGPFEQV+MEIRC DGG+GGRK++F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 1685 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHL 1506
            PATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ I+ RADQKLYHL
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1505 QTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIY 1326
            QTPQ PIVRT +Y+KY+++EFP GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  GQIY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1325 QVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTT 1149
            Q ET+DL E  G+     R+F +S ++ S    ID DG PHVGQ+++P +PYCSI N  T
Sbjct: 790  QTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 1148 DKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGV 969
                  + KGS  E VYVDYVA DV  +KK   KVNIRFRHPRNP+IGDKFSSRHGQKGV
Sbjct: 850  SSIHTLKRKGS--EAVYVDYVAADVK-NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGV 906

Query: 968  CSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFA 789
            CSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF 
Sbjct: 907  CSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFR 966

Query: 788  SSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQR 612
            SS     G+S+ KS SL+D+LG  L  KGF YHGLEV+YSG  GTE+ CEIFIGPVYYQR
Sbjct: 967  SSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQR 1026

Query: 611  LRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTC 432
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLHTC
Sbjct: 1027 LRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1086

Query: 431  SDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAM 252
            SD+HIADVCSLCGS+L TT  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETVAM
Sbjct: 1087 SDYHIADVCSLCGSMLATTFIQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAM 1145

Query: 251  PYVFRYLAAELAAMNIKMTLKLTNGA 174
            PYVFRYLAAELAAMNIKMTLKL++GA
Sbjct: 1146 PYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score = 1636 bits (4236), Expect = 0.0
 Identities = 811/1164 (69%), Positives = 946/1164 (81%), Gaps = 2/1164 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            ++E LRELF+ HI+SFD+L++ GLE +L+++KP                         + 
Sbjct: 7    DYEPLRELFQHHIDSFDHLVEFGLETLLMSVKP-------------------------RS 41

Query: 3479 AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNLRK 3300
            A+ +RD +YP+ECRQAK SYSG+L   VCFQY  G   R     G  PIML SK C+LR 
Sbjct: 42   ARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKFNLGQFPIMLKSKLCHLRG 101

Query: 3299 ANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDKAV 3120
            A+P KLVS KEE++EMGGYFIL GLER++R++I+ KRN+P+++ RNSFR++++GYTDKAV
Sbjct: 102  ADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFRDRREGYTDKAV 161

Query: 3119 VIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSLTC 2940
            VIRCVR D SA+T++LYYL+NGSARLGFW+ GRE+LLPVGV+LKALIDT DHEIY SLTC
Sbjct: 162  VIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDHEIYESLTC 221

Query: 2939 CHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETESG 2760
            C++E ++ GKG VGTQLVGERVKIILDEVR LSL T+ QCL ++GE F+ VM GLE ES 
Sbjct: 222  CYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQHIGEHFQLVMDGLENESY 281

Query: 2759 SIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPGHL 2580
            SI+ D VLR+Y+F+HL+NN+DKFNLLIFM+QKLF+ +DQT  PDN D LQN EVLLPGHL
Sbjct: 282  SIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDVLQNQEVLLPGHL 341

Query: 2579 ITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENLLI 2400
            IT+YLK+                   +  +F+F  +  VKKVM+K PS+ +  A+EN+L 
Sbjct: 342  ITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKVMDKNPSRQISLAVENMLK 400

Query: 2399 IGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPESWG 2220
             G L +QSGLDL QR G T+QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLPE+WG
Sbjct: 401  TGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPEAWG 460

Query: 2219 FLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPK 2040
            FLCPVHTPDGEPCGLLNH+ STCRITSY+DS G  +DF KIR SI+SVL GIGM P+LPK
Sbjct: 461  FLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIRMSILSVLIGIGMTPALPK 520

Query: 2039 LVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGG 1860
            LV+AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  S IPDDLE+GY+PL+MGG
Sbjct: 521  LVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAISVIPDDLEVGYIPLSMGG 580

Query: 1859 AYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFPA 1680
            AYPGLYLFTSPSRFVRPVRNISIPSEE  +IELIGPFEQVYMEIRC DG +GGR+N FPA
Sbjct: 581  AYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYMEIRCPDGSDGGRRNIFPA 640

Query: 1679 THEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHLQT 1500
            THEEIHPTGMLSVVA+LTPWSDHNQSPRNMYQCQM KQTM FSSQAI  RADQKLYHLQT
Sbjct: 641  THEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAFSSQAINCRADQKLYHLQT 700

Query: 1499 PQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIYQV 1320
            PQ PIVRT +Y KY ++EFP GTNAIVAVLAY+GYDMEDAMILNKSSV+RG+C GQIYQ 
Sbjct: 701  PQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMILNKSSVDRGLCHGQIYQT 760

Query: 1319 ETVDLK-EDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTTDK 1143
            ET+DL  E+ K   G R+F RS +D S N +ID DG P+VGQ++ P +PYCSI N  T  
Sbjct: 761  ETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQMINPNEPYCSIYNEVTSS 820

Query: 1142 FEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGVCS 963
                ++KGS  EPV VDYVA+D   +KK P KVNIRFR PRNPIIGDKFSSRHGQKGVCS
Sbjct: 821  TRATKLKGS--EPVIVDYVALDAK-NKKHPQKVNIRFRRPRNPIIGDKFSSRHGQKGVCS 877

Query: 962  QLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASS 783
            QLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF+ S
Sbjct: 878  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDS 937

Query: 782  TKVKDGKS-EKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQRLR 606
             +  +G++  +SSSL+DELGS L + GF YHG+EV+YSGF GTE+ CEIFIGPVYYQRLR
Sbjct: 938  LRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLR 997

Query: 605  HMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSD 426
            HMVSDKFQVRSTG VDQ+TRQP          RFGEMERDSMLAHGAAYLLHDRLHTCSD
Sbjct: 998  HMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSD 1057

Query: 425  HHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPY 246
            HHIADVCSLCGS+LTT+  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETV+MPY
Sbjct: 1058 HHIADVCSLCGSILTTSIIQPQKRAVREIG-GLPPGRAPKKVTCHACQTSKGMETVSMPY 1116

Query: 245  VFRYLAAELAAMNIKMTLKLTNGA 174
            +FR+LAAELAAMNIKMTL+L+NGA
Sbjct: 1117 IFRFLAAELAAMNIKMTLQLSNGA 1140


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score = 1631 bits (4224), Expect = 0.0
 Identities = 809/1166 (69%), Positives = 947/1166 (81%), Gaps = 4/1166 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            +FE LRELFK HIESFDY+ D GLE +L +IKP+EV ++ T   LRIW DN  L  P+K 
Sbjct: 10   DFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3479 --AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNL 3306
              ++ +R+ + P+ECRQAK SY+G++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSKLCNL 129

Query: 3305 RKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDK 3126
            R A+P KLVS++EEA+EMGGYFIL GLER++R++I+ KRN P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYREEASEMGGYFILNGLERVIRLLILPKRNHPMSMVRNSFSDRREGYTDK 189

Query: 3125 AVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSL 2946
            A+VIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKALIDT D EIYV+L
Sbjct: 190  AIVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 2945 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETE 2766
            T C+NE ++KGKG VGTQLVGER KIILDE+R LSL T+ QCL Y+GE F+PV+  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVITELKND 309

Query: 2765 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 2586
            S  I+ + VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVAEAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 2585 HLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENL 2406
            HLITLYLK+                   KS  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGKRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 2405 LIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 2226
            L  G L +Q+GLDL QR G+T+QAERLNFLRFVSHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2225 WGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 2046
            WGFLCPVHTPDGEPCGLLNH+T T RITS++DS G VKD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNVKDYFKIKMSILNVLLEVGMTPSL 549

Query: 2045 PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 1866
            PK+   GPPE + VLLDGCVVG I+S+  EK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEAEKVVAHIRELKVSSAAVIPDDMEVGYVPLSM 609

Query: 1865 GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNF 1686
            GGAYPGLYL TSPSRFVRPVRNISIPS  ++NIE IGPFEQV+MEIRC DGG+GGRK++F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIPSNGSENIEFIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 1685 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHL 1506
            PATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ I+ RADQKLYHL
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1505 QTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIY 1326
            QTPQ PIVRT +Y+KY+++EFP GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  GQIY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1325 QVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTT 1149
            Q ET+DL E  G+     R+F +S L+ S    ID DG PHVGQ+++P +PYCSI N  T
Sbjct: 790  QTETIDLTEQGGRLDRSSRMFRKSNLEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 1148 DKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGV 969
                  + KGS  E VYVDYVA+DV  +KK   KVNIRFRHPRNP+IGDKFSSRHGQKGV
Sbjct: 850  SSIHTLKRKGS--EAVYVDYVAVDVK-NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGV 906

Query: 968  CSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFA 789
            CSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF 
Sbjct: 907  CSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFR 966

Query: 788  SSTKVKDGKSEK-SSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQR 612
            SS K   G+S+  S S++D+LG  L  KGF YHGLEV+YSG  GTE+ CEIFIGPVYYQR
Sbjct: 967  SSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQR 1026

Query: 611  LRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTC 432
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLHTC
Sbjct: 1027 LRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1086

Query: 431  SDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAM 252
            SD+HIADVCSLCGS+LTTT  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETVAM
Sbjct: 1087 SDYHIADVCSLCGSMLTTTFTQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAM 1145

Query: 251  PYVFRYLAAELAAMNIKMTLKLTNGA 174
            PYVFRYLAAELAAMNIKMTLKL++GA
Sbjct: 1146 PYVFRYLAAELAAMNIKMTLKLSDGA 1171


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score = 1627 bits (4212), Expect = 0.0
 Identities = 805/1167 (68%), Positives = 949/1167 (81%), Gaps = 4/1167 (0%)
 Frame = -3

Query: 3662 KEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEK 3483
            +E E L+ELFK HIESFDY+IDEGL+ +L  +KPV++ + S+ +TLRIW D+ ++  P+K
Sbjct: 16   EELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQK 75

Query: 3482 --GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCN 3309
               +K     +YP+ECRQAK SY+G   I VCFQ+D G V R  + FG+ PIML SKRC 
Sbjct: 76   DRSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSKRCY 135

Query: 3308 LRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTD 3129
            LR+A+P KLV+ KEE+ EMGGYFIL GLER++R++I+ KRN+P+++ RNSFR++++GYTD
Sbjct: 136  LREADPRKLVACKEESREMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFRDRREGYTD 195

Query: 3128 KAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVS 2949
            KAVVIRCVR D+S++T++LYYL NGSARLGFW+ GRE++LPVG+ILKALIDTND EIY  
Sbjct: 196  KAVVIRCVRGDLSSVTVKLYYLHNGSARLGFWVQGREYMLPVGIILKALIDTNDREIYTK 255

Query: 2948 LTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLET 2769
            LTCC+NE + +GKG VGTQLVGER KIILDEV+ L+L TQ+QCL ++GE F+P+M G+E+
Sbjct: 256  LTCCYNEKNGEGKGAVGTQLVGERAKIILDEVQHLALFTQEQCLQHIGEHFQPIMEGMES 315

Query: 2768 ESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLP 2589
            ES S + D VLR+Y+F+HL++N+DKFNLLIFM+QKLF+ +DQT APDN+D+LQN EVLLP
Sbjct: 316  ESYSTVADVVLRNYIFVHLDDNNDKFNLLIFMVQKLFSLIDQTSAPDNSDSLQNQEVLLP 375

Query: 2588 GHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIEN 2409
            GHLIT+YLK+                   KS +FDF  ++ VKKVM K     V +AIEN
Sbjct: 376  GHLITIYLKEKLEDWLRKGKKLIEDAINNKSKNFDFCSMKDVKKVMEKNRPTQVSAAIEN 435

Query: 2408 LLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPE 2229
            LL  G L +Q+GLDL QR GFT+QAERLN+ RF+S FR VHRGA+FAGLR+TSVRKLLPE
Sbjct: 436  LLKTGRLITQTGLDLQQRAGFTVQAERLNYHRFLSFFRCVHRGASFAGLRTTSVRKLLPE 495

Query: 2228 SWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPS 2049
            SWGFLCPVHTPDGEPCGLLNH+T TCRITSYY+S G ++DF KIR SI+ VL G+GM  S
Sbjct: 496  SWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSPGNIRDFFKIRMSILDVLVGVGMTTS 555

Query: 2048 LPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLT 1869
             PK+  AGPP+V+ VLLDG VVGS+ S   EK V H+RRLKL+  S IPDDLE+GYVPL+
Sbjct: 556  WPKVDHAGPPQVLPVLLDGRVVGSLPSGEAEKVVAHLRRLKLAAASVIPDDLEVGYVPLS 615

Query: 1868 MGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNN 1689
            +GG YPGLYLFTSPSRFVRPVRNISIPS + ++IELIGPFEQV+MEIRC DGG GGR N 
Sbjct: 616  LGGTYPGLYLFTSPSRFVRPVRNISIPSADGKDIELIGPFEQVFMEIRCPDGGNGGRSNI 675

Query: 1688 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYH 1509
            FPATHEEI PT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS QAI  RADQKLYH
Sbjct: 676  FPATHEEISPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAINARADQKLYH 735

Query: 1508 LQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQI 1329
            LQTPQ PIVRT++Y+KY ++E+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGMC GQI
Sbjct: 736  LQTPQTPIVRTKTYTKYCMDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCHGQI 795

Query: 1328 YQVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTT 1152
            YQ ET+DL +D  K   G R+F R   D S++  +D DG PHVGQV++P +PYCS  N  
Sbjct: 796  YQTETIDLGDDKSKSDRGQRIFKREHSDRSISSCLDSDGLPHVGQVIRPNEPYCSTINQV 855

Query: 1151 TDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKG 972
            T+       KGS  E V VDYVA+D   SKK   K NIRFRHPRNP+IGDKFSSRHGQKG
Sbjct: 856  TNSKRLYNHKGS--ETVIVDYVAVDTK-SKKHLQKANIRFRHPRNPVIGDKFSSRHGQKG 912

Query: 971  VCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPF 792
            VCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF
Sbjct: 913  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPF 972

Query: 791  ASSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQ 615
            + S K   GK+E +S SL+DELGS L A+GF YHG+EV+YSG  GTE+ CEIFIGPVYYQ
Sbjct: 973  SDSVKEAKGKTEAESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQ 1032

Query: 614  RLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHT 435
            RLRHMVSDK+QVR+TG VDQITRQP          RFGEMERD+MLAHGAAYLLHDRLHT
Sbjct: 1033 RLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHT 1092

Query: 434  CSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVA 255
            CSD+HIADVCSLCGS+LTT+  Q  KR+VRE G  LPP R PKKVTCHAC+TSKGMETVA
Sbjct: 1093 CSDYHIADVCSLCGSILTTSIVQPPKRVVREIG-GLPPARAPKKVTCHACQTSKGMETVA 1151

Query: 254  MPYVFRYLAAELAAMNIKMTLKLTNGA 174
            MPYVFRYLAAELAAMNI MT++L +GA
Sbjct: 1152 MPYVFRYLAAELAAMNITMTIQLNSGA 1178


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score = 1618 bits (4189), Expect = 0.0
 Identities = 797/1167 (68%), Positives = 944/1167 (80%), Gaps = 4/1167 (0%)
 Frame = -3

Query: 3665 EKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPE 3486
            +  F+ LR+L KPHIESFD++ID GL+ + + IKP+EV + +   TL+I  DN K+  P+
Sbjct: 14   DANFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQ 73

Query: 3485 K--GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRC 3312
            K  G    R+ +YP+ECRQAK SY+G     +CFQYD G + R    FG  PIML SK C
Sbjct: 74   KERGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSKLC 133

Query: 3311 NLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYT 3132
            NLR A+P KLVS+KEEA+E+GGYFIL GLER+MR++IM KRN+P++  R+SF E+++GYT
Sbjct: 134  NLRGASPKKLVSYKEEASEVGGYFILNGLERVMRLLIMPKRNYPMSTVRSSFSERREGYT 193

Query: 3131 DKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYV 2952
            DKAVVIRCVR D ++++++LYYL+NGSARLGFW+ GRE++LPVG++LKALIDT D EIYV
Sbjct: 194  DKAVVIRCVRADQTSVSIKLYYLRNGSARLGFWILGREYMLPVGIVLKALIDTTDREIYV 253

Query: 2951 SLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLE 2772
            +LT C+NE ++KGKG VGTQLVGER KIILDEVR LSL T+ QCL Y+GE F+P++ GL+
Sbjct: 254  NLTSCYNEKYEKGKGAVGTQLVGERAKIILDEVRDLSLFTRLQCLQYIGEHFQPILQGLK 313

Query: 2771 TESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLL 2592
             ES  I+ D VLRDY+ +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQN EVLL
Sbjct: 314  NESHHIVADAVLRDYILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNQEVLL 373

Query: 2591 PGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIE 2412
            PGHLITLYLK+                   K  +F+FG +  VKKV+ K  +K + +AIE
Sbjct: 374  PGHLITLYLKEKLEEWLQKGKRLLLDEIEKKGATFEFGRIADVKKVLEKNHTKGISTAIE 433

Query: 2411 NLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLP 2232
            N+L  G L + +GLDL QR G+T+QAER+NFLRF+SHFR+VHRG++FAGLR+T+VRKLLP
Sbjct: 434  NMLKTGRLVTTTGLDLHQRAGYTVQAERINFLRFISHFRAVHRGSSFAGLRTTTVRKLLP 493

Query: 2231 ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIP 2052
            ESWGFLCPVHTPDGEPCGLLNH+T TCR+TS+YDS G +KD+ KI+ SI+++L  IGM  
Sbjct: 494  ESWGFLCPVHTPDGEPCGLLNHMTRTCRVTSFYDSEGNIKDYFKIKLSILNILVEIGMTQ 553

Query: 2051 SLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPL 1872
            SLPK+   GPPEV+ VLLDGC+VG I S  VEK V HIR LK+S  + IP+D+E+GYVPL
Sbjct: 554  SLPKIFLPGPPEVLTVLLDGCIVGFIPSTEVEKVVAHIRELKVSSAAVIPNDMEVGYVPL 613

Query: 1871 TMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKN 1692
            +MGGAYPGLYLFTSPSRFVRPVRN+SIPS  N+N+ELIGPFEQV+MEIRC DGG+GGRK+
Sbjct: 614  SMGGAYPGLYLFTSPSRFVRPVRNLSIPS-TNENVELIGPFEQVFMEIRCPDGGDGGRKS 672

Query: 1691 NFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLY 1512
             FPATHEEIHPTGMLSVV NLTPWSDHNQSPRNMYQCQMAKQTMGFSSQ I+ RADQKLY
Sbjct: 673  PFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMGFSSQTIQHRADQKLY 732

Query: 1511 HLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQ 1332
            HLQTPQ PIVRT +YS+Y ++E+P+GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  GQ
Sbjct: 733  HLQTPQTPIVRTRAYSEYSIDEYPSGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQ 792

Query: 1331 IYQVETVDLKE-DGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNT 1155
            IYQ ET+DL E  GK  +  RVF +S+LD      ID DG PHVGQ++ P +PYCS  N 
Sbjct: 793  IYQTETIDLTEKGGKSDQSARVFRKSKLDKPC-PSIDSDGLPHVGQMIWPDEPYCSTYNE 851

Query: 1154 TTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQK 975
             T+K    + KGS  EPVYVDYVA+D   +KK+ +KVNIRFRHPRNP+IGDKFSSRHGQK
Sbjct: 852  VTNKTYLFKKKGS--EPVYVDYVAVDTK-TKKNLNKVNIRFRHPRNPVIGDKFSSRHGQK 908

Query: 974  GVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATP 795
            GVCSQLWPDIDMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKF DATP
Sbjct: 909  GVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATP 968

Query: 794  FASSTKVKDGKS-EKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYY 618
            F SS K  D +S  KS+SL+DELG  L  KGF YHG EV+YSG  GTE+ CEIFIGPVYY
Sbjct: 969  FRSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYY 1028

Query: 617  QRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLH 438
            QRLRHMVSDK+QVRSTG +DQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLH
Sbjct: 1029 QRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLH 1088

Query: 437  TCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETV 258
            TCSD+HIADVCS+CGS+LTTT  Q  KR VRE G  LPP R P+KVTCHAC++SKGME V
Sbjct: 1089 TCSDYHIADVCSICGSMLTTTFQQPRKRPVREIG-GLPPARAPRKVTCHACQSSKGMEKV 1147

Query: 257  AMPYVFRYLAAELAAMNIKMTLKLTNG 177
            AMPY+FRYLAAELAAMNIKMTLKLT+G
Sbjct: 1148 AMPYIFRYLAAELAAMNIKMTLKLTDG 1174


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score = 1615 bits (4181), Expect = 0.0
 Identities = 799/1170 (68%), Positives = 949/1170 (81%), Gaps = 8/1170 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            +FE LRELFK HIESFD+++  GLE  L++IKP+EV+++ T   LRIW +N  +  P+K 
Sbjct: 10   DFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPPQKE 69

Query: 3479 --AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNL 3306
              +K +R+ + P+ECRQAK SY+G++ I VCFQY+ G V R ++ FG  PIML SK CNL
Sbjct: 70   RISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSKLCNL 129

Query: 3305 RKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDK 3126
            R A+P KLVS KEEA+EMGGYFIL GLER++R++I+ KRN+P+++ R+SF ++++GYTDK
Sbjct: 130  RGADPKKLVSCKEEASEMGGYFILNGLERVIRLLILPKRNYPMSMVRSSFCDRREGYTDK 189

Query: 3125 AVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSL 2946
            AVVIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG++LKALIDT D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSIRLYYLRNGSARLGFWLRGREYLLPVGIVLKALIDTTDREIYVNL 249

Query: 2945 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETE 2766
            T C+NE + KGKG VGTQLVGER KIILDE+R LSL T++QCL Y+GE F+P+M  L  +
Sbjct: 250  TSCYNEKYAKGKGAVGTQLVGERAKIILDELRDLSLFTRRQCLEYIGEHFQPIMPELMKD 309

Query: 2765 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 2586
            S +I+ D VL+D + +HL+N+ DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYAIVADAVLKDCILVHLDNDFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 2585 HLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENL 2406
            HLI+LY+K+                   KS  FDF  +  VKK+M+K  +K V +++ENL
Sbjct: 370  HLISLYIKEKLEDWLQKGKKLLMDEIQKKSNKFDFSDIAQVKKIMDKNSAKLVSASVENL 429

Query: 2405 LIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 2226
            L  G L +Q+GLDL QR G+T+QAERLNFLRF+SHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFMSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2225 WGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 2046
            WGFLCPVHTPDGEPCGLLNH+T TCRITS++DS G +KD+ KI+KSI  +L  +GM  SL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTRTCRITSFFDSQGNIKDYFKIQKSIRDILMEVGMTSSL 549

Query: 2045 PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 1866
            PK+   GPPE + VLLDGCVVG I+S+ VEK V +IR LK+S  S IP D+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAYIRELKVSSASVIPGDMEVGYVPLSM 609

Query: 1865 GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNF 1686
            GGAYPGLYLFTSPSRFVRPV+NISIPS  +++IELIGPFEQV+MEIRC DGG+GGRK++F
Sbjct: 610  GGAYPGLYLFTSPSRFVRPVKNISIPSNGSESIELIGPFEQVFMEIRCLDGGDGGRKSSF 669

Query: 1685 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHL 1506
            PATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FSSQ I+ RADQKLYHL
Sbjct: 670  PATHEEIHPTEMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSQTIQHRADQKLYHL 729

Query: 1505 QTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIY 1326
            QTPQ PIVRT +Y+KY+++EFP GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  GQIY
Sbjct: 730  QTPQTPIVRTSTYTKYNIDEFPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 789

Query: 1325 QVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTT 1149
            Q ET+DL E  GK     R+F +S ++      ID DG PHVGQ+++P +PYCSI N  T
Sbjct: 790  QTETIDLTEQRGKSDRSSRIFRKSNVEKLGCPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 849

Query: 1148 DKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGV 969
               +  + KGS  E VYVDYVA+DV  +KK   KVNIRFRHPRNP+IGDKFSSRHGQKGV
Sbjct: 850  SSTQTYKRKGS--EAVYVDYVAVDVK-NKKHIQKVNIRFRHPRNPVIGDKFSSRHGQKGV 906

Query: 968  CSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFA 789
            CSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF 
Sbjct: 907  CSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFR 966

Query: 788  SSTKVK-DGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQR 612
            SSTK   +G   KS SL+D+LG  L  KGF YHGLEV+YSG  GTE+ CEIFIGPVYYQR
Sbjct: 967  SSTKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQR 1026

Query: 611  LRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTC 432
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLHTC
Sbjct: 1027 LRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1086

Query: 431  SDHHIADVCSLCGSLLTTTSAQTHKRIVREQG----EKLPPGRIPKKVTCHACKTSKGME 264
            SD+HIADVCSLCGS+L+TT  Q  KR VR+ G     +LPPGR  KKV+CHAC+TSKGME
Sbjct: 1087 SDYHIADVCSLCGSMLSTTFIQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGME 1146

Query: 263  TVAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            TVAMPYVFRYLAAELAAMNIKMTLKL +GA
Sbjct: 1147 TVAMPYVFRYLAAELAAMNIKMTLKLNDGA 1176


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score = 1605 bits (4155), Expect = 0.0
 Identities = 787/1171 (67%), Positives = 944/1171 (80%), Gaps = 5/1171 (0%)
 Frame = -3

Query: 3671 NTEKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLF 3492
            N  +++E LRELF+ HIESFD+L+D GLE ++ +IKPVE+ +  T + LRIW    +L  
Sbjct: 6    NENEDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYP 65

Query: 3491 PEK--GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSK 3318
            P+K    + +R+ + PYECRQAK SY+G+    VCFQYD+  V R    FG  PIML SK
Sbjct: 66   PQKERNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSK 125

Query: 3317 RCNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDG 3138
             C+LR  +P KLVS+ EEA+EMGGYF++ GLER++R++I  KRN+P ++ RNSF ++++G
Sbjct: 126  LCHLRGLDPKKLVSYNEEASEMGGYFVMNGLERVVRLLIAPKRNYPTSMVRNSFSDRREG 185

Query: 3137 YTDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEI 2958
            YTDKAVVIRCVR D S++T++LYYL+NGSARLGFW+ G+E+LLP+GV+LKALIDT DHEI
Sbjct: 186  YTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDTTDHEI 245

Query: 2957 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGG 2778
            Y SLT C+++ H K KG VGTQLVGER KIILDEVR L+L   +QCL ++G+ F+PVM G
Sbjct: 246  YASLTSCYSDKHGKSKGAVGTQLVGERAKIILDEVRDLALFDHRQCLDHIGQHFQPVMEG 305

Query: 2777 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 2598
            L  E  S + D VL+DY+F+HL+NN+DKFNLLIFM QKLF+ +DQT  PDN D+LQN +V
Sbjct: 306  LGKEKFSTVADAVLKDYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSLQNQDV 365

Query: 2597 LLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSA 2418
            LLPG LITLYLK+                    S +F+F  +  VKKVM+K PSK V SA
Sbjct: 366  LLPGQLITLYLKEKLEDWLQKVKKLLEDEISNPSKNFEFCSLAHVKKVMDKNPSKQVSSA 425

Query: 2417 IENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 2238
            +EN+L  G L +Q+GLDL QR GFT+QAERLNFLRFVSHFR+VHRGA+FAGLR+T+VRKL
Sbjct: 426  VENMLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFVSHFRAVHRGASFAGLRTTTVRKL 485

Query: 2237 LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGM 2058
            LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS+++S G V+DF KIR SI+SVL  +GM
Sbjct: 486  LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSHFNSQGKVRDFYKIRTSILSVLIAVGM 545

Query: 2057 IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 1878
            IPSLPKLV+ G P+ + VLLDG +VG ISSN VEK V H+RRLK+     IPDDLE+GYV
Sbjct: 546  IPSLPKLVQMGLPDFLNVLLDGRIVGYISSNEVEKIVAHLRRLKVLSPHVIPDDLEVGYV 605

Query: 1877 PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGR 1698
            PL++ GAYPGLYLFTSPSRFVRPV+N+SI  E+N NIELIGPFEQV+MEIRC DGG+GGR
Sbjct: 606  PLSISGAYPGLYLFTSPSRFVRPVKNLSISPEDNHNIELIGPFEQVFMEIRCPDGGDGGR 665

Query: 1697 KNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQK 1518
            K+ FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS QAI++RADQK
Sbjct: 666  KDEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIRYRADQK 725

Query: 1517 LYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCR 1338
            LYHLQTPQ PIVRT +Y+KY+++E+P GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  
Sbjct: 726  LYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMFH 785

Query: 1337 GQIYQVETVDLKEDG-KEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIR 1161
            GQIYQ ET+DL + G +     ++F RS +D S+  +ID DG P+VGQ+++P +PYCSI 
Sbjct: 786  GQIYQTETIDLSDQGNRSSRSQKMFRRSNIDTSVRSIIDADGLPYVGQMIQPDEPYCSIY 845

Query: 1160 NTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHG 981
            +         ++KGS  E V VDYV++DV  +K +P KVNIRFR PRNP+IGDKFSSRHG
Sbjct: 846  DEVAGTTRTMKLKGS--EAVIVDYVSVDVK-NKNNPQKVNIRFRRPRNPMIGDKFSSRHG 902

Query: 980  QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDA 801
            QKGVCSQLWPD+DMPF   TGMRPDLIINPHAFPSRMTI ML+ES+AAKGG LNG+FV+A
Sbjct: 903  QKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNA 962

Query: 800  TPFASSTKVKDGKSEKSS--SLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGP 627
            TPF SS    +   E+++  +L+DELGS L+ KGF YHGLEV+YSG  GTE+ CEIFIGP
Sbjct: 963  TPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGP 1022

Query: 626  VYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHD 447
            VYYQRLRHMVSDK+QVRSTG VDQ+TRQP          RFGEMERDSMLAHGA+YLLHD
Sbjct: 1023 VYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHD 1082

Query: 446  RLHTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGM 267
            RLHTCSDHHIADVCSLCGS+LT++  Q  KR VRE G  LPPG+ PK+VTCHACKTSKGM
Sbjct: 1083 RLHTCSDHHIADVCSLCGSVLTSSFVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGM 1141

Query: 266  ETVAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            ETVAMPYVF+YLAAELAAMNIKMTL+L++GA
Sbjct: 1142 ETVAMPYVFKYLAAELAAMNIKMTLQLSSGA 1172


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score = 1589 bits (4114), Expect = 0.0
 Identities = 787/1169 (67%), Positives = 946/1169 (80%), Gaps = 7/1169 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEK- 3483
            +FE LREL + HIESFDY++DEGL ++  ++K V V +  T + L+I   N ++  P+K 
Sbjct: 8    DFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFPPQKE 67

Query: 3482 -GAKGVRDKIYPYECRQAKESYSGELKISVCFQY-DKGH-VQRHDMYFGDVPIMLMSKRC 3312
             G+K +RD + P+ECRQAK SY+G+L   V FQY D G  V R    FG  P+ML ++RC
Sbjct: 68   QGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLKTRRC 127

Query: 3311 NLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYT 3132
            +L+ A+  KLVS KEEA EMGGYFIL GLER+ R +I+ K+N+P+++ R+SFR++++GYT
Sbjct: 128  HLQGADSQKLVSLKEEAAEMGGYFILNGLERVFRSVILPKQNYPMSMVRSSFRDRREGYT 187

Query: 3131 DKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYV 2952
            DKAVVIRCVR D S++TL+LYYL NGS RLGFWL G+E+LLPVG++LKAL+DTND EI+ 
Sbjct: 188  DKAVVIRCVRKDQSSVTLKLYYLLNGSVRLGFWLQGKEYLLPVGIVLKALVDTNDLEIFN 247

Query: 2951 SLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLE 2772
             LTCC++E ++K KG VG+ LV ERVKIIL EV+ LSL T+ QCL ++GE F+PV+ GL+
Sbjct: 248  HLTCCYDEKYKKEKGAVGSPLVSERVKIILAEVQDLSLTTRLQCLQHIGEHFQPVIDGLQ 307

Query: 2771 TESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLL 2592
            +ES   + +TV+RDY+F+HL +N+DKFNLLIFMLQKLF+ VD T   DN D+LQN E+LL
Sbjct: 308  SESYYAVAETVIRDYIFVHLNDNNDKFNLLIFMLQKLFSLVDHTSVSDNPDSLQNQEILL 367

Query: 2591 PGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIE 2412
            PGHLIT+YLK+                       FDF  +  +KKVM K PSK +G++IE
Sbjct: 368  PGHLITIYLKEKLEDWLRKGKKLIQDEIENNGKKFDFFNLANIKKVMEKNPSKQIGTSIE 427

Query: 2411 NLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLP 2232
             +L  G L +Q+GLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR+TSVRKLLP
Sbjct: 428  TMLKTGRLATQTGLDLQQRAGYTVQAERLNFLRFISFFRAVHRGASFAGLRTTSVRKLLP 487

Query: 2231 ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIP 2052
            ESWGFLCPVHTPDGEPCGLLNH+TSTCR+ SYYDS G ++DF K+R SI+ VL G+GMIP
Sbjct: 488  ESWGFLCPVHTPDGEPCGLLNHMTSTCRVASYYDSRGNIRDFSKMRTSILRVLIGVGMIP 547

Query: 2051 SLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPL 1872
            SLPKLV++GPP V+ VLLDG VVG I S+ +EK V H+RRLK+S  S IPDDLE+GYVPL
Sbjct: 548  SLPKLVKSGPPAVLSVLLDGRVVGVIPSSEIEKVVAHLRRLKVSAASVIPDDLEVGYVPL 607

Query: 1871 TMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKN 1692
            ++GGAYPGLYLFTSP +FVRPVRNIS+PSEE+QNIELIGPFEQV+MEIRC DGG+GGR+N
Sbjct: 608  SLGGAYPGLYLFTSPPKFVRPVRNISLPSEESQNIELIGPFEQVFMEIRCPDGGDGGRRN 667

Query: 1691 NFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLY 1512
             FPATHEEIHPTGMLSVVANLTP+SDHNQSPRNMYQCQMAKQTMGFS QA+KFRADQKLY
Sbjct: 668  AFPATHEEIHPTGMLSVVANLTPYSDHNQSPRNMYQCQMAKQTMGFSVQALKFRADQKLY 727

Query: 1511 HLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQ 1332
            HLQTPQ PIVRT +Y+KY ++E+P GTNAIVAVLAYTGYDMEDAMILNKSSV+RGMC GQ
Sbjct: 728  HLQTPQTPIVRTNTYTKYSIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVDRGMCHGQ 787

Query: 1331 IYQVETVDLKEDG-KEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNT 1155
            IYQ ET+DL +DG K   G ++F R++   SL+ +ID DG P+VGQ++ P +PYCSI + 
Sbjct: 788  IYQTETIDLSDDGNKVDRGQKLFRRNKDAKSLHSVIDSDGLPYVGQMIHPGEPYCSIYDK 847

Query: 1154 TTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQK 975
            TT+ +     KGS  E V+VDYVA+D+ +SK  P K NIRFRH RNPIIGDKFSSRHGQK
Sbjct: 848  TTNSWRTNSRKGS--ESVFVDYVAVDMKNSKNLPQKANIRFRHTRNPIIGDKFSSRHGQK 905

Query: 974  GVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATP 795
            GVCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKF+DATP
Sbjct: 906  GVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATP 965

Query: 794  FASSTKVKDGK--SEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVY 621
            FA+S K  +G   +++S SL+DELG  L   GF YHG+EV+YSG  GTE+ CEIFIGPVY
Sbjct: 966  FANSVKKTNGDTGTDESKSLVDELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVY 1025

Query: 620  YQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRL 441
            YQRLRHMVSDKFQVRSTG +DQITRQP          RFGEMERDS+LAHGAAYLLHDRL
Sbjct: 1026 YQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRL 1085

Query: 440  HTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMET 261
            HTCSD+H+ADVCSLCGS+LT T     KR +RE G  LPP R PKKVTCHAC+TSKGMET
Sbjct: 1086 HTCSDYHVADVCSLCGSVLTATFIHPQKRAIREIG-GLPPARAPKKVTCHACQTSKGMET 1144

Query: 260  VAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            VAMPYVFRYLAAELAAMNIK+TL+L +GA
Sbjct: 1145 VAMPYVFRYLAAELAAMNIKITLQLGDGA 1173


>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
            lycopersicum]
          Length = 1184

 Score = 1574 bits (4075), Expect = 0.0
 Identities = 782/1168 (66%), Positives = 931/1168 (79%), Gaps = 4/1168 (0%)
 Frame = -3

Query: 3665 EKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPE 3486
            EK++  L+ELF  HIESFDY++D GLE +L+NIKP+E+V+  +   LRIWF   +L  P+
Sbjct: 22   EKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQ 81

Query: 3485 K--GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRC 3312
            K   +K + D +YP+ECRQAK SYSG+  + +CFQY  G V R    FG  PIML SK C
Sbjct: 82   KERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLC 141

Query: 3311 NLRKANPAK-LVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGY 3135
            +LR A+ +K LV++KEE +EMGGYFILKGLER++R+II+ KRN+P ++ RNSFR++++GY
Sbjct: 142  HLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGY 201

Query: 3134 TDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIY 2955
            +DKAVVIRCVR D SA++L+LYYL NGSARLGFW+ GRE+LLPVG+ILKAL+DT DHEIY
Sbjct: 202  SDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIY 261

Query: 2954 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGL 2775
            V+LTCC+NE   + KG VGTQLVGER KIILDEV++LSL T+ QCL ++GE F+PV+ G+
Sbjct: 262  VNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGM 321

Query: 2774 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 2595
            + +S   + D VLRDY+F+HL+NNHDKFNLLIFMLQKLF+ +DQT   DN D+LQN EVL
Sbjct: 322  QNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVL 381

Query: 2594 LPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAI 2415
            LPGHLIT+YLK+                   +   F+   +  VKK + K   K +G  I
Sbjct: 382  LPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLTI 441

Query: 2414 ENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 2235
            E++L  G L +QSGLDL QR G T+QAE+LNFLRF+SHFR+VHRGA+FAGLR+TSVRKLL
Sbjct: 442  ESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 501

Query: 2234 PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMI 2055
            PESWGFLCPVHTPDGEPCGLLNH+T++CRITSYYDS G VKDF K+R SI++VL  IGM 
Sbjct: 502  PESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMT 561

Query: 2054 PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 1875
            PS PKLV+AGPPE++ VLLDG + G I S+++EKAV H+RRLKLS  S IP DLE+GY+P
Sbjct: 562  PSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIP 621

Query: 1874 LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRK 1695
            L+M GAYPGLYLFTSPSRFVRPVRNIS P+EE  ++ELIGPFEQVYMEI C DGG+GGRK
Sbjct: 622  LSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELIGPFEQVYMEISCPDGGDGGRK 681

Query: 1694 NNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKL 1515
              FPATH EIHPT +LSVV NLTPWSDHNQSPRNMYQCQM KQTMGFSSQA+  RADQKL
Sbjct: 682  TLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKL 741

Query: 1514 YHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRG 1335
            YHLQTPQ PIVRT++Y KY V+++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMC G
Sbjct: 742  YHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHG 801

Query: 1334 QIYQVETVDLKE-DGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRN 1158
             IYQ ET+DL E   K     R+F RS LD S + +ID DG P+VGQ + P +PYCSI N
Sbjct: 802  HIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDSDGLPYVGQRINPNEPYCSIYN 861

Query: 1157 TTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQ 978
              T +    ++KGS  EPV VDYVA+DV  +K    K NIRFR  RNP+IGDKFSSRHGQ
Sbjct: 862  EITSQTTCMKLKGS--EPVVVDYVAVDVK-NKAHLQKANIRFRRSRNPVIGDKFSSRHGQ 918

Query: 977  KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 798
            KGVCSQLWPD+DMPFS+VTGMRPDLIINPHAFPSRMTI MLLESIAAKGG+L+GKFVDAT
Sbjct: 919  KGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDAT 978

Query: 797  PFASSTKVKDGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYY 618
            PF  S  +K+ +SE SSSL+D+LGS L   GF +HG EV+YSG  GTE+ C IFIGPVYY
Sbjct: 979  PF--SNTMKESESE-SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCRIFIGPVYY 1035

Query: 617  QRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLH 438
            QRLRHMVSDKFQVRSTG VD ITRQP          RFGEMERDS+LAHGA+YLLHDRLH
Sbjct: 1036 QRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGASYLLHDRLH 1095

Query: 437  TCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETV 258
            T SDHHIADVCS CGS+LT++  Q  KR V+   ++L P R PKKVTC AC++SKGMETV
Sbjct: 1096 TSSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQL-PAREPKKVTCVACRSSKGMETV 1154

Query: 257  AMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            AMPYVF+YLAAELAAMNIKMTLKL+N A
Sbjct: 1155 AMPYVFKYLAAELAAMNIKMTLKLSNEA 1182


>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            [Solanum tuberosum]
          Length = 1179

 Score = 1569 bits (4062), Expect = 0.0
 Identities = 779/1168 (66%), Positives = 930/1168 (79%), Gaps = 4/1168 (0%)
 Frame = -3

Query: 3665 EKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPE 3486
            EK++  L+ELF  HIESFDY++D GLE +L+NIKP+E+V+  +   LRIWF   +L  P+
Sbjct: 17   EKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPPQ 76

Query: 3485 K--GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRC 3312
            K   +K + D +YP+ECRQAK SY+G+  + +CFQY  G V R    FG  PIML SK C
Sbjct: 77   KERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSKLC 136

Query: 3311 NLRKANPA-KLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGY 3135
            +LR A+ + KL+++KEE +EMGGYFILKGLER++R+II+ KRN+P ++ RNSFR++++GY
Sbjct: 137  HLRGADDSRKLIAYKEEPSEMGGYFILKGLERVIRLIILPKRNYPTSMARNSFRDRREGY 196

Query: 3134 TDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIY 2955
            +DKAVVIRCVR D SA++L+LYYL NGSARLGFW+ GRE+LLPVG+ILKAL+DT DHEIY
Sbjct: 197  SDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGREYLLPVGIILKALVDTTDHEIY 256

Query: 2954 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGL 2775
            V+LTCC+NE   + KG VGTQLVGER KIILDEV++LSL T+ QCL ++GE F+PV+ G+
Sbjct: 257  VNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSLFTRAQCLRHIGEHFQPVVIGM 316

Query: 2774 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 2595
            + +S   + D VLRDY+F+HL+NNHDKFNLLIFMLQKLF+ +DQT   DN D+LQN EVL
Sbjct: 317  QNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLFSLIDQTSVLDNPDSLQNQEVL 376

Query: 2594 LPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAI 2415
            LPGHLIT+YLK+                   +   F+   +  VKK + K   K +G AI
Sbjct: 377  LPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELSSLTDVKKAIEKNAPKQIGLAI 436

Query: 2414 ENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 2235
            E++L  G L +QSGLDL QR G T+QAE+LNFLRF+SHFR+VHRGA+FAGLR+TSVRKLL
Sbjct: 437  ESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHFRAVHRGASFAGLRTTSVRKLL 496

Query: 2234 PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMI 2055
            PESWGFLCPVHTPDGEPCGLLNH+T++CRITSYYDS G VKDF K+R SI++VL  IGM 
Sbjct: 497  PESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGNVKDFFKMRMSILNVLIAIGMT 556

Query: 2054 PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 1875
            P  PKLV+ GPPE++ VLLDG + G I S+++EKAV H+RRLKLS  S IP DLE+GY+P
Sbjct: 557  PPSPKLVQGGPPELLSVLLDGRIAGYIPSDLIEKAVTHLRRLKLSSTSSIPVDLEVGYIP 616

Query: 1874 LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRK 1695
            L+M GAYPGLYLFTSPSRFVRPVRNIS P+EE  ++EL+GPFEQVYMEI C DGG+GGRK
Sbjct: 617  LSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELVGPFEQVYMEISCPDGGDGGRK 676

Query: 1694 NNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKL 1515
              FPATH EIHPT +LSVV NLTPWSDHNQSPRNMYQCQM KQTMGFSSQA+  RADQKL
Sbjct: 677  TLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQMGKQTMGFSSQALNCRADQKL 736

Query: 1514 YHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRG 1335
            YHLQTPQ PIVRT++Y KY V+++P GTNAIVAVLAY+GYDMEDAM+LNKSSV+RGMC G
Sbjct: 737  YHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSGYDMEDAMVLNKSSVDRGMCHG 796

Query: 1334 QIYQVETVDLKE-DGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRN 1158
             IYQ ET+DL E   K     R+F RS LD S + +ID DG P+VGQ + P +PYCSI N
Sbjct: 797  HIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDTDGLPYVGQRINPNEPYCSIYN 856

Query: 1157 TTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQ 978
              T +    ++KGS  EPV VDYVA+DV  +K    K NIRFR  RNP+IGDKFSSRHGQ
Sbjct: 857  EITSQTTSMKLKGS--EPVVVDYVAVDVK-NKTHLQKANIRFRRSRNPVIGDKFSSRHGQ 913

Query: 977  KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 798
            KGVCSQLWPD+DMPFS+VTGMRPDLIINPHAFPSRMTI MLLESIAAKGG+L+GKFVDAT
Sbjct: 914  KGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFVDAT 973

Query: 797  PFASSTKVKDGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYY 618
            PF  S  +K+ +SE SSSL+D+LGS L   GF +HG EV+YSG  GTE+ C IFIGPVYY
Sbjct: 974  PF--SNTMKESESE-SSSLVDDLGSMLAVCGFNHHGTEVLYSGVYGTELTCLIFIGPVYY 1030

Query: 617  QRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLH 438
            QRLRHMVSDKFQVRSTG VD ITRQP          RFGEMERDS+LAHGAAYLLHDRLH
Sbjct: 1031 QRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDSLLAHGAAYLLHDRLH 1090

Query: 437  TCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETV 258
            T SDHHIADVCS CGS+LT++  Q  KR V+   ++L P R PKKVTC AC++SKGMETV
Sbjct: 1091 TSSDHHIADVCSECGSVLTSSVIQPPKRAVQVILKQL-PAREPKKVTCVACRSSKGMETV 1149

Query: 257  AMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            AMPYVF+YLAAELAAMNIKMTLKL+N A
Sbjct: 1150 AMPYVFKYLAAELAAMNIKMTLKLSNEA 1177


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score = 1568 bits (4060), Expect = 0.0
 Identities = 780/1122 (69%), Positives = 906/1122 (80%), Gaps = 4/1122 (0%)
 Frame = -3

Query: 3527 LRIWFDNHKLLFPEK--GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDM 3354
            + +WF   +L  P+K   A+ +RD +YP+ECRQAK SYSG+L   VCFQY  G   R   
Sbjct: 17   IALWFGQPELYPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVAIREKF 76

Query: 3353 YFGDVPIMLMSKRCNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLN 3174
              G  PIML SK C+LR A+P KLVS KEE++EMGGYFIL GLER++R++I+ KRN+P++
Sbjct: 77   NLGQFPIMLKSKLCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMS 136

Query: 3173 VERNSFREKQDGYTDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVI 2994
            + RNSFR++++GYTDKAVVIRCVR D SA+T++LYYL+NGSARLGFW+ GRE+LLPVGV+
Sbjct: 137  MVRNSFRDRREGYTDKAVVIRCVREDQSAVTVKLYYLRNGSARLGFWIQGREYLLPVGVV 196

Query: 2993 LKALIDTNDHEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLH 2814
            LKALIDT DHEIY SLTCC++E ++ GKG VGTQLVGERVKIILDEVR LSL T+ QCL 
Sbjct: 197  LKALIDTTDHEIYESLTCCYSEKYEGGKGAVGTQLVGERVKIILDEVRDLSLFTRHQCLQ 256

Query: 2813 YLGESFRPVMGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVA 2634
            ++GE F+ VM GLE ES SI+ D VLR+Y+F+HL+NN+DKFNLLIFM+QKLF+ +DQT  
Sbjct: 257  HIGEHFQLVMDGLENESYSIVADAVLREYIFVHLDNNYDKFNLLIFMVQKLFSLIDQTSV 316

Query: 2633 PDNTDALQNHEVLLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKV 2454
            PDN D LQN EVLLPGHLIT+YLK+                   +  +F+F  +  VKKV
Sbjct: 317  PDNPDVLQNQEVLLPGHLITIYLKEKLQEWLYKARRLLQDEINKRK-NFEFSSLAHVKKV 375

Query: 2453 MNKYPSKSVGSAIENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAA 2274
            M+K PS+ +  A+EN+L  G L +QSGLDL QR G T+QAERLNFLRF+SHFR+VHRGA+
Sbjct: 376  MDKNPSRQISLAVENMLKTGRLVTQSGLDLQQRAGMTVQAERLNFLRFLSHFRAVHRGAS 435

Query: 2273 FAGLRSTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIR 2094
            FAGLR+TSVRKLLPE+WGFLCPVHTPDGEPCGLLNH+ STCRITSY+DS G  +DF KIR
Sbjct: 436  FAGLRTTSVRKLLPEAWGFLCPVHTPDGEPCGLLNHMASTCRITSYFDSRGNTRDFFKIR 495

Query: 2093 KSIVSVLTGIGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPY 1914
             SI+SVL GIGM P+LPKLV+AGPPEV+ V+LDG VVGSI S+ VE AV H+RRLK+S  
Sbjct: 496  MSILSVLIGIGMTPALPKLVQAGPPEVLSVILDGRVVGSIPSSEVETAVNHLRRLKVSAI 555

Query: 1913 SGIPDDLEIGYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYM 1734
            S IPDDLE+GY+PL+MGGAYPGLYLFTSPSRFVRPVRNISIPSEE  +IELIGPFEQVYM
Sbjct: 556  SVIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFVRPVRNISIPSEEGHDIELIGPFEQVYM 615

Query: 1733 EIRCADGGEGGRKNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGF 1554
            EIRC DG +GGR+N FPATHEEIHPTGMLSVVA+LTPWSDHNQSPRNMYQCQM KQTM F
Sbjct: 616  EIRCPDGSDGGRRNIFPATHEEIHPTGMLSVVASLTPWSDHNQSPRNMYQCQMGKQTMAF 675

Query: 1553 SSQAIKFRADQKLYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMI 1374
            SSQAI  RADQKLYHLQTPQ PIVRT +Y KY ++EFP GTNAIVAVLAY+GYDMEDAMI
Sbjct: 676  SSQAINCRADQKLYHLQTPQTPIVRTSAYVKYSMDEFPTGTNAIVAVLAYSGYDMEDAMI 735

Query: 1373 LNKSSVERGMCRGQIYQVETVDLK-EDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQ 1197
            LNKSSV+RG+C GQIYQ ET+DL  E+ K   G R+F RS +D S N +ID DG P+VGQ
Sbjct: 736  LNKSSVDRGLCHGQIYQTETIDLSDENNKSDRGQRMFRRSNVDKSANSLIDSDGLPYVGQ 795

Query: 1196 VLKPKDPYCSIRNTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRN 1017
            ++ P +PYCSI N  T      ++KGS  EPV VDYVA+D   +KK P KVNIRFR PRN
Sbjct: 796  MINPNEPYCSIYNEVTSSTRATKLKGS--EPVIVDYVALDAK-NKKHPQKVNIRFRRPRN 852

Query: 1016 PIIGDKFSSRHGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAA 837
            PIIGDKFSSRHGQKGVCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AA
Sbjct: 853  PIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAA 912

Query: 836  KGGSLNGKFVDATPFASSTKVKDGKS-EKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLG 660
            KGGSL+GKFVDATPF+ S +  +G++  +SSSL+DELGS L + GF YHG+EV+YSGF G
Sbjct: 913  KGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNYHGVEVLYSGFYG 972

Query: 659  TEMACEIFIGPVYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSM 480
            TE+ CEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ+TRQP          RFGEMERDSM
Sbjct: 973  TELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSM 1032

Query: 479  LAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKV 300
            LAHGAAYLLHDRLHTCSDHHIADVCSLCGS+LTT+  Q  KR                  
Sbjct: 1033 LAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSIIQPQKR------------------ 1074

Query: 299  TCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
                  TSKGMETV+MPY+FR+LAAELAAMNIKMTL+L+NGA
Sbjct: 1075 -----ATSKGMETVSMPYIFRFLAAELAAMNIKMTLQLSNGA 1111


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score = 1550 bits (4013), Expect = 0.0
 Identities = 771/1168 (66%), Positives = 925/1168 (79%), Gaps = 6/1168 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            +  +LRELF+ HIESFDYL+  GL  +L +IKPV+V N  TG+TLRIWF +  +L     
Sbjct: 14   DLAHLRELFRHHIESFDYLVSAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPIL----- 68

Query: 3479 AKGVRDK----IYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRC 3312
             + ++D+    +YP+ECRQ + SY+G+L   + FQ       R    FG  PIMLMSK C
Sbjct: 69   GRPLKDRSTEPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCC 128

Query: 3311 NLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYT 3132
            NLR  +P +LV  KEE++EMGGYFIL GLER++R +I+ KRN+P++  RNSFR++++GYT
Sbjct: 129  NLRGHDPQQLVYCKEESSEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYT 188

Query: 3131 DKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYV 2952
            DKAVVIRC R D S++T++LYYLQNGSARLG W+ G+EFLLPVG+ILKALIDT D+E+Y 
Sbjct: 189  DKAVVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALIDTPDNELYA 248

Query: 2951 SLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLE 2772
            SLTCC+ E  +KGKG VGTQLVGER +II++EV  L L T+ QCL ++GE F+P+MGGLE
Sbjct: 249  SLTCCYPEKFEKGKGAVGTQLVGERAQIIINEVVDLGLFTRGQCLEHIGEHFQPLMGGLE 308

Query: 2771 TESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLL 2592
             E  S++GD VL+DY+F+HL+ N DKFNLLIFMLQKLF+ +DQT   DN D+LQN EVLL
Sbjct: 309  NEPYSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLL 368

Query: 2591 PGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIE 2412
            PGHLIT+YLK+                   +S + +FG V+ +KKV++K P++ +  A+E
Sbjct: 369  PGHLITIYLKEKLEDWLQRTKKLLQDEIKKESNNINFGSVDSLKKVLDKNPTRQISLAVE 428

Query: 2411 NLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLP 2232
            N+L  G + +Q+GLDL QR GF++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLP
Sbjct: 429  NMLKTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLP 488

Query: 2231 ESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIP 2052
            ESWGFLCPVHTPDGEPCGLLNH+T TCRITSY+D+ G ++DF K++ SI++VL  +GMIP
Sbjct: 489  ESWGFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKMQMSILNVLIEVGMIP 548

Query: 2051 SLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPL 1872
            SLP LV AG P  + VLLDG VVG ISS  VEK V H+R+LK+S  S IPDDLE+GYVPL
Sbjct: 549  SLPMLVHAGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPL 608

Query: 1871 TMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKN 1692
            +MGGAYPGLYLFTSPSRFVRPV+NISI + E QNIELIGPFEQV+MEIRC DG +GGRK+
Sbjct: 609  SMGGAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIRCPDGRDGGRKD 668

Query: 1691 NFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLY 1512
             FPATHEEIHPTGMLSVVANLTPWS+HNQSPRNMYQCQMAKQTMGFS QA++ RADQKLY
Sbjct: 669  AFPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLY 728

Query: 1511 HLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQ 1332
            HL+TPQ+PIVRT++Y+ Y V+E+P GTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM  G 
Sbjct: 729  HLKTPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGL 788

Query: 1331 IYQVETVDLKEDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTT 1152
            +YQ E++DL +        R F RS  D S + +ID DG P+VGQ +KP +PY S  +  
Sbjct: 789  VYQTESIDLSDQKGRSGSQRSFRRSAADKSYHSLIDSDGLPYVGQTIKPDEPYYSTYDEV 848

Query: 1151 TDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKG 972
              K   +  K  G EP  VDYVAI   D KK   KVNIRFRHPRNPIIGDKFSSRHGQKG
Sbjct: 849  --KGAIRTTKRKGSEPAIVDYVAI---DGKKQLQKVNIRFRHPRNPIIGDKFSSRHGQKG 903

Query: 971  VCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPF 792
            VCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GK+VDATPF
Sbjct: 904  VCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPF 963

Query: 791  ASSTK--VKDGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYY 618
            A+S K   ++   EKS +L+DELG  L  KGF Y+G EV+YSG  GTE+ CEIFIGPVYY
Sbjct: 964  ANSEKKVKEETNGEKSKTLVDELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYY 1023

Query: 617  QRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLH 438
            QRLRHMVSDKFQVRSTG+VDQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLH
Sbjct: 1024 QRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLH 1083

Query: 437  TCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETV 258
            TCSD+HIADVCSLCGS+LTT+S Q   R+    G  +PP R PKKVTCHACKTSKGMETV
Sbjct: 1084 TCSDYHIADVCSLCGSILTTSSVQPPVRVCEIPG--MPPMRAPKKVTCHACKTSKGMETV 1141

Query: 257  AMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            AMPYVFRYLAAELAAMNIK+ L+L+N +
Sbjct: 1142 AMPYVFRYLAAELAAMNIKLNLQLSNAS 1169


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score = 1546 bits (4004), Expect = 0.0
 Identities = 781/1166 (66%), Positives = 917/1166 (78%), Gaps = 4/1166 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            +FE LRELFK HIESFDY++D GL+ +L +IKPVEV ++ T   LRIW DN  L  P+K 
Sbjct: 10   DFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPPQKE 69

Query: 3479 --AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNL 3306
              ++ +R+ + P+ECRQAK SYSG++ I VCFQY+ G + R ++ FG  PIML SK CNL
Sbjct: 70   RISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSKLCNL 129

Query: 3305 RKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDK 3126
            R A+P KLVS+KEEA+EMGGYFIL GLER++R++I+ KRN+P+++ RNSF ++++GYTDK
Sbjct: 130  RGADPQKLVSYKEEASEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFSDRREGYTDK 189

Query: 3125 AVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSL 2946
            AVVIRCVR D S+L++RLYYL+NGSARLGFWL GRE+LLPVG+ILKALIDT D EIYV+L
Sbjct: 190  AVVIRCVRADQSSLSVRLYYLRNGSARLGFWLRGREYLLPVGIILKALIDTTDREIYVNL 249

Query: 2945 TCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETE 2766
            T C+NE ++KGKG VGTQLVGER KIILDE+R LSL T+ QCL Y+GE F+PVM  L+ +
Sbjct: 250  TSCYNEKYEKGKGAVGTQLVGERAKIILDELRDLSLFTRLQCLEYIGEHFQPVMNELKND 309

Query: 2765 SGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPG 2586
            S  I+ D VL+D + +HL+NN DKFNLLIFMLQKLF+ +DQT  PDN D+LQNHEVLLPG
Sbjct: 310  SYPIVADAVLKDCILVHLDNNFDKFNLLIFMLQKLFSLIDQTSVPDNPDSLQNHEVLLPG 369

Query: 2585 HLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENL 2406
            HLITLYLK+                   KS  FDF  +  VKKVM+K   K V +A+EN+
Sbjct: 370  HLITLYLKEKLEDWLQKGRRLLLDEIDKKSKKFDFSDIVQVKKVMDKNSPKQVSTAVENM 429

Query: 2405 LIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPES 2226
            L  G L +Q+GLDL QR G+T+QAERLNFLRF+SHFR+VHRGA+FAGLR+T+VRKLLPES
Sbjct: 430  LKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTTTVRKLLPES 489

Query: 2225 WGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSL 2046
            WGFLCPVHTPDGEPCGLLNH+T T RITS++DS G +KD+ KI+ SI++VL  +GM PSL
Sbjct: 490  WGFLCPVHTPDGEPCGLLNHMTCTSRITSFFDSQGNIKDYFKIKMSILNVLLEVGMTPSL 549

Query: 2045 PKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTM 1866
            PK+   GPPE + VLLDGCVVG I+S+ VEK V HIR LK+S  + IPDD+E+GYVPL+M
Sbjct: 550  PKIFLPGPPEALTVLLDGCVVGCIASSEVEKVVAHIRELKVSSVAVIPDDMEVGYVPLSM 609

Query: 1865 GGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNF 1686
            GGAYPGLYL TSPSRFVRPVRNISI S+ ++NIELIGPFEQV+MEIRC DGG+GGRK++F
Sbjct: 610  GGAYPGLYLCTSPSRFVRPVRNISIASDGSENIELIGPFEQVFMEIRCPDGGDGGRKSSF 669

Query: 1685 PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHL 1506
            PATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQ   A   + F++ +   R        
Sbjct: 670  PATHEEIHPTVMLSVVANLTPWSDHNQSPRNMYQYGKANNGIFFTNYSTSCR-------- 721

Query: 1505 QTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIY 1326
                 P V + S           GTNAIVAVLAYTGYDMEDAMILNKSSVERGM  GQIY
Sbjct: 722  -----PKVISSS-----------GTNAIVAVLAYTGYDMEDAMILNKSSVERGMFHGQIY 765

Query: 1325 QVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTT 1149
            Q ET+DL E  G+     R+F +S ++ S    ID DG PHVGQ+++P +PYCSI N  T
Sbjct: 766  QTETIDLTEQGGRSDRSSRMFRKSNIEKSACPSIDSDGLPHVGQMIRPDEPYCSIYNEVT 825

Query: 1148 DKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGV 969
                  + KGS  E VYVDYVA DV  +KK   KVNIRFRHPRNP+IGDKFSSRHGQKGV
Sbjct: 826  SSIHTLKRKGS--EAVYVDYVAADVK-NKKHLQKVNIRFRHPRNPVIGDKFSSRHGQKGV 882

Query: 968  CSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFA 789
            CSQLWPD+DMPFS  TGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF 
Sbjct: 883  CSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFR 942

Query: 788  SSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQR 612
            SS     G+S+ KS SL+D+LG  L  KGF YHGLEV+YSG  GTE+ CEIFIGPVYYQR
Sbjct: 943  SSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQR 1002

Query: 611  LRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTC 432
            LRHMVSDKFQVRSTG +DQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLHTC
Sbjct: 1003 LRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTC 1062

Query: 431  SDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAM 252
            SD+HIADVCSLCGS+L TT  Q  KR VRE G  LPPGR PKKVTCHAC+TSKGMETVAM
Sbjct: 1063 SDYHIADVCSLCGSMLATTFIQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAM 1121

Query: 251  PYVFRYLAAELAAMNIKMTLKLTNGA 174
            PYVFRYLAAELAAMNIKMTLKL++GA
Sbjct: 1122 PYVFRYLAAELAAMNIKMTLKLSDGA 1147


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score = 1544 bits (3997), Expect = 0.0
 Identities = 772/1163 (66%), Positives = 919/1163 (79%), Gaps = 3/1163 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLF-PEK 3483
            +  +LRELF+ HI+SFDYLI  GL  +L +IKPV+V N  TG+TLRIWF +  +L  P K
Sbjct: 12   DLAHLRELFRHHIDSFDYLITAGLGVMLRDIKPVQVDNPLTGETLRIWFADDPILGRPLK 71

Query: 3482 GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNLR 3303
                  + +YP+ECRQ + SY+G+L   + FQ       R    FG  PIMLMSK CNLR
Sbjct: 72   DRSS--EPLYPFECRQTRISYTGKLLADIYFQRGDKAPVREQFNFGQFPIMLMSKCCNLR 129

Query: 3302 KANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDKA 3123
              +P +LVS KEEA+EMGGYFIL GLER++R +I+ KRN+P++  RNSFR++++GYTDKA
Sbjct: 130  GHDPQQLVSCKEEASEMGGYFILNGLERVIRPVILPKRNYPMSTVRNSFRDRKEGYTDKA 189

Query: 3122 VVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSLT 2943
            VVIRC R D S++T++LYYLQNGSARLG W+ G+EFLLPVG+ILKAL+DT D+E+Y SLT
Sbjct: 190  VVIRCARDDQSSVTVKLYYLQNGSARLGVWIQGKEFLLPVGLILKALVDTPDNELYASLT 249

Query: 2942 CCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETES 2763
            CC+    +KGKG VGTQLVGER +II++EV  L L T+ QCL  +GE F+P+M GLE ES
Sbjct: 250  CCYPGKFEKGKGAVGTQLVGERAQIIINEVVELGLFTRGQCLENIGEHFQPLMSGLENES 309

Query: 2762 GSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPGH 2583
             S++GD VL+DY+F+HL+ N DKFNLLIFMLQKLF+ +DQT   DN D+LQN EVLLPGH
Sbjct: 310  YSVVGDAVLKDYIFVHLDKNEDKFNLLIFMLQKLFSLMDQTSVLDNPDSLQNQEVLLPGH 369

Query: 2582 LITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAIENLL 2403
            LIT+YLK+                   ++ + +FG V+ +KKV++K P++ +  A+EN+L
Sbjct: 370  LITIYLKEKLEDWLQRTKKLLQDEIKKENNNINFGSVDSLKKVLDKNPTRQISLAVENML 429

Query: 2402 IIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPESW 2223
              G + +Q+GLDL QR GF++QAERLNFLRF+SHFR+VHRGA+FAGLR+TSVRKLLPESW
Sbjct: 430  KTGRINTQTGLDLQQRAGFSVQAERLNFLRFLSHFRAVHRGASFAGLRTTSVRKLLPESW 489

Query: 2222 GFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPSLP 2043
            GFLCPVHTPDGEPCGLLNH+T TCRITSY+D+ G ++DF KIR SI++VL  +GMIPSLP
Sbjct: 490  GFLCPVHTPDGEPCGLLNHMTRTCRITSYFDAQGNIRDFTKIRMSILNVLIEVGMIPSLP 549

Query: 2042 KLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMG 1863
             LV  G P  + VLLDG VVG ISS  VEK V H+R+LK+S  S IPDDLE+GYVPL+MG
Sbjct: 550  MLVHVGLPANLSVLLDGRVVGYISSTQVEKVVAHLRKLKVSAASVIPDDLEVGYVPLSMG 609

Query: 1862 GAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNNFP 1683
            GAYPGLYLFTSPSRFVRPV+NISI + E QNIELIGPFEQV+MEI+C DG +GGRK+ FP
Sbjct: 610  GAYPGLYLFTSPSRFVRPVKNISISAVEGQNIELIGPFEQVFMEIKCPDGRDGGRKDAFP 669

Query: 1682 ATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYHLQ 1503
            ATHEEIHPTGMLSVVANLTPWS+HNQSPRNMYQCQMAKQTMGFS QA++ RADQKLYHL+
Sbjct: 670  ATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMGFSLQALRNRADQKLYHLK 729

Query: 1502 TPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQIYQ 1323
            TPQ+PIVRT++Y+ Y V+E+P GTNAIVAVL+YTGYDMEDAMIL+KSSV+RGM  G +YQ
Sbjct: 730  TPQSPIVRTKTYTNYCVDEYPTGTNAIVAVLSYTGYDMEDAMILSKSSVDRGMFHGLVYQ 789

Query: 1322 VETVDLKEDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTTTDK 1143
             E+VDL +        R F RS  D S + +ID DG P+VGQ + P +PY SI +    K
Sbjct: 790  TESVDLSDQKGRSGSQRSFRRSAADKSHHSLIDSDGLPYVGQTINPDEPYYSIYDEV--K 847

Query: 1142 FEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKGVCS 963
               +  K  G EP  VDYVAI   D KK   KVNIRFRHPRNPIIGDKFSSRHGQKGVCS
Sbjct: 848  GAIRTTKRKGSEPAIVDYVAI---DGKKHLQKVNIRFRHPRNPIIGDKFSSRHGQKGVCS 904

Query: 962  QLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASS 783
            QLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPFA+S
Sbjct: 905  QLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFANS 964

Query: 782  TKV--KDGKSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQRL 609
             K   ++   EKS +L+DELG  L  KGF Y+G EV+YSG  GTE+ CEIFIGPVYYQRL
Sbjct: 965  EKKVNEETNGEKSKTLVDELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQRL 1024

Query: 608  RHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCS 429
            RHMVSDKFQVRSTG+VDQ+TRQP          RFGEMERDS+LAHGAAYLLHDRLHTCS
Sbjct: 1025 RHMVSDKFQVRSTGMVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCS 1084

Query: 428  DHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMP 249
            D+HIADVCSLCGS+LTT+S Q    +    G  +PP R PKKVTCHACKTSKGMETVAMP
Sbjct: 1085 DYHIADVCSLCGSILTTSSVQPQVPVREIPG--MPPMRAPKKVTCHACKTSKGMETVAMP 1142

Query: 248  YVFRYLAAELAAMNIKMTLKLTN 180
            YVFRYLAAELAAMNIK+ L+L+N
Sbjct: 1143 YVFRYLAAELAAMNIKLNLQLSN 1165


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score = 1543 bits (3995), Expect = 0.0
 Identities = 775/1171 (66%), Positives = 919/1171 (78%), Gaps = 9/1171 (0%)
 Frame = -3

Query: 3659 EFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEKG 3480
            ++  L+EL + HI+SFDY+I+ GLE +L NIKP                         + 
Sbjct: 17   DYSALQELTRHHIDSFDYMIERGLEIMLDNIKP-------------------------ES 51

Query: 3479 AKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNLRK 3300
            ++    ++ P+ECRQAK SY+G+ +  VCF+Y    V R    FG +PIML S+ C+L  
Sbjct: 52   SRTKHKRLLPFECRQAKISYTGKFEADVCFEYHGKAVIREKYNFGQLPIMLKSRLCHLYG 111

Query: 3299 ANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDKAV 3120
             +  +LVS  EE+ EMGGYFIL GLER++R++IM KRN+P++  R SFR++++GYTDKAV
Sbjct: 112  VDSQQLVSFNEESAEMGGYFILNGLERVVRLLIMPKRNYPMSTVRGSFRDRREGYTDKAV 171

Query: 3119 VIRCVR------VDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEI 2958
            VIRCVR       D S+++++LYYL++GSARLGFW+ GRE+LLP G++LKAL +T D EI
Sbjct: 172  VIRCVREYQSSLTDQSSVSVKLYYLRSGSARLGFWIQGREYLLPAGIVLKALAETTDREI 231

Query: 2957 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGG 2778
            Y  LTCC++E ++K KG VG+QLVGER KIILDEVR LSL TQ +CL ++GE F+PVM G
Sbjct: 232  YEKLTCCYDEKYEKAKGAVGSQLVGERAKIILDEVRDLSLFTQSECLRHIGEHFQPVMDG 291

Query: 2777 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 2598
            LE E+ S +   VL+DY+F+HL N  DKFNLLIFMLQKLF+ VDQT   DN D+LQN EV
Sbjct: 292  LEKETFSNVAHAVLKDYIFVHLNNYDDKFNLLIFMLQKLFSLVDQTSVVDNPDSLQNQEV 351

Query: 2597 LLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSA 2418
            LLPGHL+T+YLK+                    + +F+F  V  VKKV++K PS ++  A
Sbjct: 352  LLPGHLVTIYLKEKLEEWLRKAKKVLQEEIAKNN-NFNFLSVLDVKKVIDKNPSTTISLA 410

Query: 2417 IENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 2238
            +EN+L  G L +Q+GLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR+TSVRKL
Sbjct: 411  VENMLKTGRLVTQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTSVRKL 470

Query: 2237 LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGM 2058
            LPESWGFLCPVHTPDGEPCGLLNH+T +CRITSY+DS G VKDF  IRKSI+ VLT +GM
Sbjct: 471  LPESWGFLCPVHTPDGEPCGLLNHMTRSCRITSYFDSQGAVKDFFDIRKSILGVLTSLGM 530

Query: 2057 IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 1878
              SLPKLV+AGPP+V+ VLLDG VVGSI S+ VEK V H+RRLK++  S IPDDLE+GYV
Sbjct: 531  TSSLPKLVQAGPPQVLSVLLDGRVVGSIPSSQVEKVVVHLRRLKVAASSVIPDDLEVGYV 590

Query: 1877 PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGR 1698
            PL+MGGA+PGLYLFTSPSRF+RPV+NISIP+ E +NIELIGPFEQV+MEIRC DGG GGR
Sbjct: 591  PLSMGGAFPGLYLFTSPSRFIRPVKNISIPAGEGENIELIGPFEQVFMEIRCPDGGNGGR 650

Query: 1697 KNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQK 1518
             + FPATHEEIHPT MLSVVANLTPWSDHNQSPRNMYQCQMAKQTM FS Q+++FRADQK
Sbjct: 651  SDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQSLRFRADQK 710

Query: 1517 LYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCR 1338
            LYHLQTPQ PIVRT SY+KY V+E+P GTNAIVAVLAYTGYDMEDAMILNKSSVERGMC 
Sbjct: 711  LYHLQTPQTPIVRTSSYTKYCVDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCH 770

Query: 1337 GQIYQVETVDLKEDGKEKE-GPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIR 1161
            GQIYQ ET+DL E+G   +   R+F RS +D SL+ +ID DG P+VGQ++ P +PYCSI 
Sbjct: 771  GQIYQTETIDLSEEGSRSDRAQRMFRRSNIDKSLHSVIDSDGLPYVGQMIHPNEPYCSIY 830

Query: 1160 NTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHG 981
            N  T+       KGS  +PV VDYVAID   +KK   KVNIRFRHPRNPIIGDKFSSRHG
Sbjct: 831  NEITNTTRTNNRKGS--DPVIVDYVAIDTK-NKKHLQKVNIRFRHPRNPIIGDKFSSRHG 887

Query: 980  QKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDA 801
            QKGVCSQLWPDIDMPFS VTGMRPDLIINPHAFPSRMTI MLLES+AAKGGSLNGKFVDA
Sbjct: 888  QKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDA 947

Query: 800  TPFASSTKVKDGKSEK--SSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGP 627
            TPF SS K  +G   K  S SL+D+LG+ L + GF YHG+EV+YSG  GTE+ CEIFIGP
Sbjct: 948  TPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGP 1007

Query: 626  VYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHD 447
            VYYQRLRHMVSDKFQVRSTG VDQITRQP          RFGEMERD+MLAHGAAYLLHD
Sbjct: 1008 VYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHD 1067

Query: 446  RLHTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGM 267
            RLHTCSD+HIADVCSLCGS+LTT+  QT KR+VR+ G  LPP   PKKV CH+C+TSKGM
Sbjct: 1068 RLHTCSDYHIADVCSLCGSILTTSFIQTQKRVVRDIG-GLPPVGAPKKVACHSCQTSKGM 1126

Query: 266  ETVAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            ETVAMPYVFRYLAAELAAMNIKM ++L+ GA
Sbjct: 1127 ETVAMPYVFRYLAAELAAMNIKMNVQLSGGA 1157


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score = 1517 bits (3927), Expect = 0.0
 Identities = 743/1166 (63%), Positives = 916/1166 (78%), Gaps = 6/1166 (0%)
 Frame = -3

Query: 3662 KEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEK 3483
            ++F  L  L   HIESFDY+ ++GL  +   IKPV V   ST + L IW ++ ++  P+K
Sbjct: 15   EDFTELHNLVTHHIESFDYMTEKGLAVMFSRIKPVTVYEPSTERKLSIWLEDPRVYSPQK 74

Query: 3482 GA---KGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMY-FGDVPIMLMSKR 3315
             +      ++ ++P+ECRQAK SY+G L   +CF+YD+      D Y FG+ PIMLMSK 
Sbjct: 75   ESLRSTSRKEALFPFECRQAKISYTGSLMAEICFRYDEDEYVVRDRYEFGEFPIMLMSKL 134

Query: 3314 CNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGY 3135
            C+LR A+  +L+ +KE  +EMGGYFIL G+ER+ R +I  KRN P  + RNSF  +++GY
Sbjct: 135  CHLRGADCRQLLKYKESTSEMGGYFILNGIERVFRCVIAPKRNHPTGMVRNSFCGRREGY 194

Query: 3134 TDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIY 2955
            +DKAV IRCVR D S++T++LYYL+NGSAR+GFW+  RE+LLPVGV+LKAL +TND EIY
Sbjct: 195  SDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGAREYLLPVGVVLKALTETNDEEIY 254

Query: 2954 VSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGL 2775
             +LTCC+NE + +G G +GTQL+ ER KIILDEVR L L T+ QC  YLGE F+P + GL
Sbjct: 255  ENLTCCYNERYGRGDGAIGTQLIRERSKIILDEVRDLGLFTRDQCRKYLGERFQPALDGL 314

Query: 2774 ETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVL 2595
            E ES   + + VL++Y+F+HL+N+ DKFNLLIF++QKLF+ VDQT  PDN D+LQN E+L
Sbjct: 315  EKESYPTVAEAVLKNYIFVHLDNDDDKFNLLIFLIQKLFSLVDQTSLPDNPDSLQNQEIL 374

Query: 2594 LPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSAI 2415
            +PGHLIT+YLK+                    S  F F  +  VKK++NK P +S+G +I
Sbjct: 375  VPGHLITIYLKEKLEEWLRKCKSLIEDEFNR-SKKFSFETIADVKKIINKNPPRSIGMSI 433

Query: 2414 ENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLL 2235
            E LL  G L +QSGLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR+T+VRKLL
Sbjct: 434  ETLLKSGRLNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLL 493

Query: 2234 PESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMI 2055
            PESWGFLCPVHTPDGEPCGLLNH+T TCRITS +DSNG ++DFLKIRKS+V VL G+GM+
Sbjct: 494  PESWGFLCPVHTPDGEPCGLLNHMTRTCRITSQFDSNGNIRDFLKIRKSVVDVLVGVGMV 553

Query: 2054 PSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVP 1875
            PSLPKLVRAGPP+V+ VLLDG VVGS+SSN+V + V ++RRLK+   S IP+DLE+GYVP
Sbjct: 554  PSLPKLVRAGPPKVITVLLDGQVVGSLSSNLVTEVVAYLRRLKVEAPSVIPEDLEVGYVP 613

Query: 1874 LTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRK 1695
             +MGG+YPGLYL + PSRF+RPV+N S+PS+   NIEL+GPFEQV+MEI C DGG GGR 
Sbjct: 614  TSMGGSYPGLYLASCPSRFIRPVKNNSVPSD---NIELVGPFEQVFMEISCPDGGNGGRN 670

Query: 1694 NNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKL 1515
            N+  ATHEEIHPTG++SVVANLTPWSDHNQSPRNMYQCQMAKQTM +S+QA++FRADQK+
Sbjct: 671  NSSTATHEEIHPTGIISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKI 730

Query: 1514 YHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRG 1335
            YHLQTPQ+P+VRT++Y+ Y ++E P GTNAIVAVLA+TG+DMEDAMILNKSSVERGMC G
Sbjct: 731  YHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHG 790

Query: 1334 QIYQVETVDLKED-GKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRN 1158
            QIYQ ETVDL +   +   G + F RS++D S +  ID DG P++GQ + P +PYCSI +
Sbjct: 791  QIYQTETVDLSDQRSRSDNGNQSFRRSKVDKSAHSCIDADGLPYIGQKIYPNEPYCSIYD 850

Query: 1157 TTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQ 978
              T+    K +K  G +PV VD+V++D+  SKK P K NIRFRH RNPIIGDKFSSRHGQ
Sbjct: 851  GVTN--SIKTMKRKGTDPVIVDFVSVDMK-SKKHPQKANIRFRHARNPIIGDKFSSRHGQ 907

Query: 977  KGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDAT 798
            KGVCSQLWPDIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLESIAAKGGSL G+FVDAT
Sbjct: 908  KGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLRGEFVDAT 967

Query: 797  PFASSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVY 621
            PF  + K  +G+ E KSS L+D+LGS L  KGF Y+G E +YSG+LG E+ CEIF+GPVY
Sbjct: 968  PFRDAVKKPNGEEESKSSLLVDDLGSMLKEKGFNYYGTETLYSGYLGVELKCEIFMGPVY 1027

Query: 620  YQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRL 441
            YQRLRHMVSDKFQVRSTG+VDQ+TRQP          RFGEMERD+MLAHGA+YLLHDRL
Sbjct: 1028 YQRLRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGGGIRFGEMERDAMLAHGASYLLHDRL 1087

Query: 440  HTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMET 261
            HT SDHHIADVCSLCGSLLT++     ++ + +   KLPPGR PKKVTC +CKTSKGMET
Sbjct: 1088 HTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQDIGKLPPGRTPKKVTCDSCKTSKGMET 1147

Query: 260  VAMPYVFRYLAAELAAMNIKMTLKLT 183
            VAMPYVFRYLAAELAAMNIK+TL+L+
Sbjct: 1148 VAMPYVFRYLAAELAAMNIKVTLQLS 1173


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score = 1513 bits (3916), Expect = 0.0
 Identities = 745/1078 (69%), Positives = 884/1078 (82%), Gaps = 5/1078 (0%)
 Frame = -3

Query: 3392 FQY-DKGH-VQRHDMYFGDVPIMLMSKRCNLRKANPAKLVSHKEEATEMGGYFILKGLER 3219
            FQY D G  V R    FG  P+ML ++RC+L+ A+  KLVS KEEA EMGGYFIL GLER
Sbjct: 6    FQYLDAGSPVVRERFNFGQFPVMLKTRRCHLQGADSQKLVSLKEEAAEMGGYFILNGLER 65

Query: 3218 LMRIIIMQKRNFPLNVERNSFREKQDGYTDKAVVIRCVRVDMSALTLRLYYLQNGSARLG 3039
            + R +I+ K+N+P+++ R+SFR++++GYTDKAVVIRCVR D S++TL+LYYL NGS RLG
Sbjct: 66   VFRSVILPKQNYPMSMVRSSFRDRREGYTDKAVVIRCVRKDQSSVTLKLYYLLNGSVRLG 125

Query: 3038 FWLDGREFLLPVGVILKALIDTNDHEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILD 2859
            FWL G+E+LLPVG++LKAL+DTND EI+  LTCC++E ++K KG VG+ LV ERVKIIL 
Sbjct: 126  FWLQGKEYLLPVGIVLKALVDTNDLEIFNHLTCCYDEKYKKEKGAVGSPLVSERVKIILA 185

Query: 2858 EVRSLSLLTQQQCLHYLGESFRPVMGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLI 2679
            EV+ LSL T+ QCL ++GE F+PV+ GL++ES   + +TV+RDY+F+HL +N+DKFNLLI
Sbjct: 186  EVQDLSLTTRLQCLQHIGEHFQPVIDGLQSESYYAVAETVIRDYIFVHLNDNNDKFNLLI 245

Query: 2678 FMLQKLFAFVDQTVAPDNTDALQNHEVLLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXK 2499
            FMLQKLF+ VD T   DN D+LQN E+LLPGHLIT+YLK+                    
Sbjct: 246  FMLQKLFSLVDHTSVSDNPDSLQNQEILLPGHLITIYLKEKLEDWLRKGKKLIQDEIENN 305

Query: 2498 SPSFDFGIVEMVKKVMNKYPSKSVGSAIENLLIIGTLQSQSGLDLPQRKGFTIQAERLNF 2319
               FDF  +  +KKVM K PSK +G++IE +L  G L +Q+GLDL QR G+T+QAERLNF
Sbjct: 306  GKKFDFFNLANIKKVMEKNPSKQIGTSIETMLKTGRLATQTGLDLQQRAGYTVQAERLNF 365

Query: 2318 LRFVSHFRSVHRGAAFAGLRSTSVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITS 2139
            LRF+S FR+VHRGA+FAGLR+TSVRKLLPESWGFLCPVHTPDGEPCGLLNH+TSTCR+ S
Sbjct: 366  LRFISFFRAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRVAS 425

Query: 2138 YYDSNGTVKDFLKIRKSIVSVLTGIGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIV 1959
            YYDS G ++DF K+R SI+ VL G+GMIPSLPKLV++GPP V+ VLLDG VVG I S+ +
Sbjct: 426  YYDSRGNIRDFSKMRTSILRVLIGVGMIPSLPKLVKSGPPAVLSVLLDGRVVGVIPSSEI 485

Query: 1958 EKAVEHIRRLKLSPYSGIPDDLEIGYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEE 1779
            EK V H+RRLK+S  S IPDDLE+GYVPL++GGAYPGLYLFTSP +FVRPVRNIS+PSEE
Sbjct: 486  EKVVAHLRRLKVSAASVIPDDLEVGYVPLSLGGAYPGLYLFTSPPKFVRPVRNISLPSEE 545

Query: 1778 NQNIELIGPFEQVYMEIRCADGGEGGRKNNFPATHEEIHPTGMLSVVANLTPWSDHNQSP 1599
            +QNIELIGPFEQV+MEIRC DGG+GGR+N FPATHEEIHPTGMLSVVANLTP+SDHNQSP
Sbjct: 546  SQNIELIGPFEQVFMEIRCPDGGDGGRRNAFPATHEEIHPTGMLSVVANLTPYSDHNQSP 605

Query: 1598 RNMYQCQMAKQTMGFSSQAIKFRADQKLYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIV 1419
            RNMYQCQMAKQTMGFS QA+KFRADQKLYHLQTPQ PIVRT +Y+KY ++E+P GTNAIV
Sbjct: 606  RNMYQCQMAKQTMGFSVQALKFRADQKLYHLQTPQTPIVRTNTYTKYSIDEYPTGTNAIV 665

Query: 1418 AVLAYTGYDMEDAMILNKSSVERGMCRGQIYQVETVDLKEDG-KEKEGPRVFDRSRLDNS 1242
            AVLAYTGYDMEDAMILNKSSV+RGMC GQIYQ ET+DL +DG K   G ++F R++   S
Sbjct: 666  AVLAYTGYDMEDAMILNKSSVDRGMCHGQIYQTETIDLSDDGNKVDRGQKLFRRNKDAKS 725

Query: 1241 LNHMIDRDGFPHVGQVLKPKDPYCSIRNTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSK 1062
            L+ +ID DG P+VGQ++ P +PYCSI + TT+ +     KGS  E V+VDYVA+D+ +SK
Sbjct: 726  LHSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGS--ESVFVDYVAVDMKNSK 783

Query: 1061 KDPHKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAF 882
              P K NIRFRH RNPIIGDKFSSRHGQKGVCSQLWPDIDMPFS VTGMRPDLIINPHAF
Sbjct: 784  NLPQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAF 843

Query: 881  PSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGK--SEKSSSLIDELGSQLVAK 708
            PSRMTI MLLES+AAKGGSL+GKF+DATPFA+S K  +G   +++S SL+DELG  L   
Sbjct: 844  PSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTC 903

Query: 707  GFQYHGLEVMYSGFLGTEMACEIFIGPVYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXX 528
            GF YHG+EV+YSG  GTE+ CEIFIGPVYYQRLRHMVSDKFQVRSTG +DQITRQP    
Sbjct: 904  GFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGR 963

Query: 527  XXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTSAQTHKRIV 348
                  RFGEMERDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LT T     KR +
Sbjct: 964  KRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTATFIHPQKRAI 1023

Query: 347  REQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLTNGA 174
            RE G  LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIK+TL+L +GA
Sbjct: 1024 REIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKITLQLGDGA 1080


>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
            lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
            ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
          Length = 1188

 Score = 1503 bits (3891), Expect = 0.0
 Identities = 742/1175 (63%), Positives = 916/1175 (77%), Gaps = 12/1175 (1%)
 Frame = -3

Query: 3668 TEKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLR-------IWFD 3510
            T ++ + L  L   HIESFDY+  +GL+ +   IKPV V + +T   L        +W +
Sbjct: 12   TMEDLKELHNLVTHHIESFDYMTQKGLDVMFNRIKPVSVYDPNTENELSNILFFMILWLE 71

Query: 3509 NHKLLFPEKGA---KGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDV 3339
            N  +  P+K +      ++ + P+ECRQAK SY+G     VCF+Y+ G V R    FG  
Sbjct: 72   NPVVFAPQKESFRSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDRFDFGQF 131

Query: 3338 PIMLMSKRCNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNS 3159
            PIMLMSK C+LR A+  KL+  KE  +EMGGYFIL G+ER+ R +I  KRN P ++ RNS
Sbjct: 132  PIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNS 191

Query: 3158 FREKQDGYTDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALI 2979
            FR++++GYT+KAVV RCVR D S++T++LYYL+NGSAR+GFW+ GRE+LLPVG++LKAL 
Sbjct: 192  FRDRKEGYTEKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALT 251

Query: 2978 DTNDHEIYVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGES 2799
            +T D EIY SL CC++E + +G G +GTQL+ ER KIILDEVR L L T++QC  +LG+ 
Sbjct: 252  NTCDEEIYESLNCCYSEHYGRGDGAIGTQLIRERAKIILDEVRDLGLFTREQCRKHLGQH 311

Query: 2798 FRPVMGGLETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTD 2619
            F+PV+ GLE ES  ++ + VLRDY+F+HL+N+HDKFNLLIF++QKL++ VDQT  PDN D
Sbjct: 312  FQPVLDGLEKESHPMVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPD 371

Query: 2618 ALQNHEVLLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYP 2439
            +LQN E+L+PGH+IT+YLK+                    S  F F  +  VKK++NK P
Sbjct: 372  SLQNQEILVPGHVITIYLKEKLEDWLRKCKSLLKDELLNTSSKFSFESLADVKKLINKNP 431

Query: 2438 SKSVGSAIENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLR 2259
             +S+G++IE LL  G L++QSGLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR
Sbjct: 432  PRSIGTSIETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLR 491

Query: 2258 STSVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVS 2079
            +T+VRKLLPESWGFLCPVHTPDG PCGLLNH+T T RITS +DS G ++DFLKIRKS+V 
Sbjct: 492  TTTVRKLLPESWGFLCPVHTPDGTPCGLLNHMTCTSRITSQFDSKGNIRDFLKIRKSVVE 551

Query: 2078 VLTGIGMIPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPD 1899
            VLTG GM+ SLPKLVRAGPP+V+ VLLDG VVG++SSN+V K V ++RRLK+   S IP+
Sbjct: 552  VLTGAGMVSSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYLRRLKVEAPSVIPE 611

Query: 1898 DLEIGYVPLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCA 1719
            DLE+GYVP++MGG+YPGLYL + P+RF+RPV+NISIPSE   NIELIGPFEQV+MEI C 
Sbjct: 612  DLEVGYVPISMGGSYPGLYLASCPARFIRPVKNISIPSE---NIELIGPFEQVFMEISCP 668

Query: 1718 DGGEGGRKNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAI 1539
            DGG GGR N+ PATHEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTM +S+QA+
Sbjct: 669  DGGNGGRNNSSPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQAL 728

Query: 1538 KFRADQKLYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSS 1359
            +FRADQK+YHLQTPQ+P+VRT++Y+ Y ++E P GTNAIVAVLA+TG+DMEDAMILNKSS
Sbjct: 729  QFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSS 788

Query: 1358 VERGMCRGQIYQVETVDLK-EDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPK 1182
            VERGMC GQIYQ E +DL  ++ +   G + F RS  D S +  ID DG P+VGQ + P 
Sbjct: 789  VERGMCHGQIYQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSRIDADGLPYVGQKIYPD 848

Query: 1181 DPYCSIRNTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGD 1002
            +PYC I +  T K   + +KG G +PV VD+V++D+  SKK P K NIRFRH RNPIIGD
Sbjct: 849  EPYCRIYDEVTGK--QRLMKGKGTDPVIVDFVSVDMK-SKKHPQKANIRFRHARNPIIGD 905

Query: 1001 KFSSRHGQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSL 822
            KFSSRHGQKGVCSQLWPDI+MPF+ VTGMRPDLIINPHAFPSRMTI MLLESIAAKGGSL
Sbjct: 906  KFSSRHGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL 965

Query: 821  NGKFVDATPFASSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMAC 645
            +GKFVDATPF  + K  +G+ E KSS L+D+LGS L  KGF Y+G E +YSG LG E+ C
Sbjct: 966  HGKFVDATPFRDAVKKTNGEKESKSSLLVDDLGSMLKEKGFNYYGTETLYSGSLGVELKC 1025

Query: 644  EIFIGPVYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGA 465
            EIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+T QP          RFGEMERDS+LAHGA
Sbjct: 1026 EIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA 1085

Query: 464  AYLLHDRLHTCSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHAC 285
            +YLLHDRLHT SDHHIADVCSLCGSLLT++     ++ + +   KLPPGR PKKVTCH+C
Sbjct: 1086 SYLLHDRLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIKVNGKLPPGRTPKKVTCHSC 1145

Query: 284  KTSKGMETVAMPYVFRYLAAELAAMNIKMTLKLTN 180
             TSKGMETVAMPYVFRYLAAELA+MNIKMTL+L++
Sbjct: 1146 GTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSD 1180


>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
            gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
            [Arabidopsis thaliana]
          Length = 1178

 Score = 1499 bits (3881), Expect = 0.0
 Identities = 744/1170 (63%), Positives = 920/1170 (78%), Gaps = 7/1170 (0%)
 Frame = -3

Query: 3668 TEKEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFP 3489
            T ++F+ L  L   HIESFDY+  +GL+ +   IKPV V + +T   L IW +N  +  P
Sbjct: 12   TMEDFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAP 71

Query: 3488 EKGA---KGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSK 3318
            +K +      ++ + P+ECRQAK SY+G     VCF+Y+ G V R    FG  PIMLMSK
Sbjct: 72   QKESFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSK 131

Query: 3317 RCNLRKANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDG 3138
             C+L+ A+  KL+  KE  +EMGGYFIL G+ER+ R +I  KRN P ++ RNSFR++++G
Sbjct: 132  LCSLKGADCRKLLKCKESTSEMGGYFILNGIERVFRCVIAPKRNHPTSMIRNSFRDRKEG 191

Query: 3137 YTDKAVVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEI 2958
            Y+ KAVV RCVR D S++T++LYYL+NGSAR+GFW+ GRE+LLPVG++LKAL ++ D EI
Sbjct: 192  YSSKAVVTRCVRDDQSSVTVKLYYLRNGSARVGFWIVGREYLLPVGLVLKALTNSCDEEI 251

Query: 2957 YVSLTCCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGG 2778
            Y SL CC++E + +G G +GTQLV ER KIILDEVR L L T++QC  +LG+ F+PV+ G
Sbjct: 252  YESLNCCYSEHYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKHLGQHFQPVLDG 311

Query: 2777 LETESGSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEV 2598
            ++ ES SI+ + VLRDY+F+HL+N+HDKFNLLIF++QKL++ VDQT  PDN D+LQN E+
Sbjct: 312  VKKESLSIVAEAVLRDYLFVHLDNDHDKFNLLIFIIQKLYSLVDQTSLPDNPDSLQNQEI 371

Query: 2597 LLPGHLITLYLKDXXXXXXXXXXXXXXXXXXXKSPSFDFGIVEMVKKVMNKYPSKSVGSA 2418
            L+PGH+IT+YLK+                    +  F F  +  VKK++NK P +S+G++
Sbjct: 372  LVPGHVITIYLKEKLEEWLRKCKSLLKDELDNTNSKFSFESLADVKKLINKNPPRSIGTS 431

Query: 2417 IENLLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKL 2238
            IE LL  G L++QSGLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR+T+VRKL
Sbjct: 432  IETLLKTGALKTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKL 491

Query: 2237 LPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGM 2058
            LPESWGFLCPVHTPDG PCGLLNH+T T RITS +DS G ++DFLKIRKS+V VLTG GM
Sbjct: 492  LPESWGFLCPVHTPDGTPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVDVLTGAGM 551

Query: 2057 IPSLPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYV 1878
            +PSLPKLVRAGPP+V+ VLLDG VVG++SSN+V K V +IRRLK+   S IP+DLE+GYV
Sbjct: 552  VPSLPKLVRAGPPKVIHVLLDGQVVGTLSSNLVTKVVSYIRRLKVEAPSVIPEDLEVGYV 611

Query: 1877 PLTMGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGR 1698
            P +MGG+YPGLYL + P+RF+RPV+NISIPS+   NIELIGPFEQV+MEI C DGG GGR
Sbjct: 612  PTSMGGSYPGLYLASCPARFIRPVKNISIPSD---NIELIGPFEQVFMEISCPDGGNGGR 668

Query: 1697 KNNFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQK 1518
             N+  ATHEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTM +S+QA++FRADQK
Sbjct: 669  NNSSLATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQK 728

Query: 1517 LYHLQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCR 1338
            +YHLQTPQ+P+VRT++Y+ Y ++E P GTNAIVAVLA+TG+DMEDAMILNKSSVERGMC 
Sbjct: 729  IYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCH 788

Query: 1337 GQIYQVETVDLK-EDGKEKEGPRVFDRSRLDNSLNHM-IDRDGFPHVGQVLKPKDPYCSI 1164
            GQIYQ E +DL  ++ +   G + F RS   N   H  ID DG P VGQ L P +PYCSI
Sbjct: 789  GQIYQTENIDLSDQNSRFDSGSKSFRRS--TNKAEHFRIDADGLPSVGQKLYPDEPYCSI 846

Query: 1163 RNTTTDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRH 984
             +  T+K   + +K  G +PV VD+V++D+  SKK P + NIRFRH RNPIIGDKFSSRH
Sbjct: 847  YDEVTNK--TRHMKRKGTDPVIVDFVSVDMK-SKKHPQRANIRFRHARNPIIGDKFSSRH 903

Query: 983  GQKGVCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVD 804
            GQKGVCSQLWPDIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLESIAAKGGSL+GKFVD
Sbjct: 904  GQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVD 963

Query: 803  ATPFASSTKVKDGKSE-KSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGP 627
            ATPF  + K  +G+ E KSS L+D+LGS L  KGF ++G E +YSG+LG E+ CEIF+GP
Sbjct: 964  ATPFRDAVKKTNGEEESKSSLLVDDLGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGP 1023

Query: 626  VYYQRLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHD 447
            VYYQRLRHMVSDKFQVRSTG VDQ+T QP          RFGEMERDS+LAHGA+YLLHD
Sbjct: 1024 VYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHD 1083

Query: 446  RLHTCSDHHIADVCSLCGSLLTTTSAQT-HKRIVREQGEKLPPGRIPKKVTCHACKTSKG 270
            RLHT SDHHIADVCSLCGSLLT++      K++++E G KLPPGR PKKVTC++CKTSKG
Sbjct: 1084 RLHTSSDHHIADVCSLCGSLLTSSVVNVQQKKLIQEIG-KLPPGRTPKKVTCYSCKTSKG 1142

Query: 269  METVAMPYVFRYLAAELAAMNIKMTLKLTN 180
            METVAMPYVFRYLAAELA+MNIKMTL+L++
Sbjct: 1143 METVAMPYVFRYLAAELASMNIKMTLQLSD 1172


>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
            gi|482575323|gb|EOA39510.1| hypothetical protein
            CARUB_v10008127mg [Capsella rubella]
          Length = 1171

 Score = 1489 bits (3855), Expect = 0.0
 Identities = 740/1165 (63%), Positives = 904/1165 (77%), Gaps = 4/1165 (0%)
 Frame = -3

Query: 3662 KEFENLRELFKPHIESFDYLIDEGLEKILVNIKPVEVVNESTGQTLRIWFDNHKLLFPEK 3483
            ++F+ L  L   HIESFDY+ D+GLE +   IKPV         T  + F   K  F   
Sbjct: 14   EDFKELHNLVTHHIESFDYMTDKGLEVMFNRIKPV---------TNPVVFAPQKESFSST 64

Query: 3482 GAKGVRDKIYPYECRQAKESYSGELKISVCFQYDKGHVQRHDMYFGDVPIMLMSKRCNLR 3303
              K   + ++P+ECRQAK SY+G     VCF+Y++G V R    FG  PIMLMSK C+LR
Sbjct: 65   SRK---EPLFPFECRQAKISYTGTFMADVCFKYNEGVVVRDKFDFGQFPIMLMSKLCSLR 121

Query: 3302 KANPAKLVSHKEEATEMGGYFILKGLERLMRIIIMQKRNFPLNVERNSFREKQDGYTDKA 3123
             A+  KL+  KE  +EMGGYF+L G+ER+ R +I  KRN P ++ RNSFR++++GY+DKA
Sbjct: 122  GADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSMIRNSFRDRREGYSDKA 181

Query: 3122 VVIRCVRVDMSALTLRLYYLQNGSARLGFWLDGREFLLPVGVILKALIDTNDHEIYVSLT 2943
            V IRCVR D S++T++LYYL+NGSAR+GFW+ GRE+LLPVG++LKAL  TND E+Y SL 
Sbjct: 182  VAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVLKALTKTNDEEVYKSLN 241

Query: 2942 CCHNEVHQKGKGVVGTQLVGERVKIILDEVRSLSLLTQQQCLHYLGESFRPVMGGLETES 2763
            CC+NE + +G G +GTQLV ER K+ILDEVR + L T++QC  +LGE F+PV+ GLE ES
Sbjct: 242  CCYNENYGRGDGAIGTQLVRERAKVILDEVRDMGLFTREQCRKHLGEHFQPVLDGLEKES 301

Query: 2762 GSIIGDTVLRDYVFIHLENNHDKFNLLIFMLQKLFAFVDQTVAPDNTDALQNHEVLLPGH 2583
               + + VLRDY+F+HL+N+HDKFNLLIF++QKL++ VDQT  PDN D+LQN E+L+PGH
Sbjct: 302  YPTVAEAVLRDYIFVHLDNDHDKFNLLIFLIQKLYSLVDQTSLPDNPDSLQNQEILVPGH 361

Query: 2582 LITLYLKDXXXXXXXXXXXXXXXXXXXKS--PSFDFGIVEMVKKVMNKYPSKSVGSAIEN 2409
            LIT+YLK+                    S    F F  +  VKK+ NK P +SVG +IE 
Sbjct: 362  LITVYLKEKLEEWLRKCKSLLKDELHNTSSKSKFSFESLADVKKLFNKNPPRSVGMSIET 421

Query: 2408 LLIIGTLQSQSGLDLPQRKGFTIQAERLNFLRFVSHFRSVHRGAAFAGLRSTSVRKLLPE 2229
            LL  G + +QSGLDL QR G+T+QAERLNFLRF+S FR+VHRGA+FAGLR+T+VRKLLPE
Sbjct: 422  LLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGASFAGLRTTTVRKLLPE 481

Query: 2228 SWGFLCPVHTPDGEPCGLLNHLTSTCRITSYYDSNGTVKDFLKIRKSIVSVLTGIGMIPS 2049
            SWGFLCPVHTPDGEPCGLLNH+T T RITS +DS G ++DFLKIRKS+V VL G GM+ S
Sbjct: 482  SWGFLCPVHTPDGEPCGLLNHMTRTSRITSQFDSKGNIRDFLKIRKSVVEVLIGAGMVSS 541

Query: 2048 LPKLVRAGPPEVVFVLLDGCVVGSISSNIVEKAVEHIRRLKLSPYSGIPDDLEIGYVPLT 1869
            LPKLV+A PPEV+ VLLDG VVG++SSN+V   V ++RRLK+   S IP+DLE+GYVP +
Sbjct: 542  LPKLVQAAPPEVIHVLLDGQVVGTLSSNLVTNVVSYLRRLKIEAPSVIPEDLEVGYVPTS 601

Query: 1868 MGGAYPGLYLFTSPSRFVRPVRNISIPSEENQNIELIGPFEQVYMEIRCADGGEGGRKNN 1689
            MGG+YPGLYL + P+RF+RPV+NISIPSE   +IELIGPFEQV+MEI C DGG GGR N+
Sbjct: 602  MGGSYPGLYLASCPARFIRPVKNISIPSE---SIELIGPFEQVFMEISCPDGGNGGRNNS 658

Query: 1688 FPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMGFSSQAIKFRADQKLYH 1509
             PATHEEIHPTGM+SVVANLTPWSDHNQSPRNMYQCQMAKQTM +S+QA++FRADQK+YH
Sbjct: 659  CPATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYSTQALQFRADQKIYH 718

Query: 1508 LQTPQNPIVRTESYSKYHVEEFPNGTNAIVAVLAYTGYDMEDAMILNKSSVERGMCRGQI 1329
            LQTPQ+P+VRT++Y+ Y ++E P GTNAIVAVLA+TG+DMEDAMILNKSSVERGMC GQI
Sbjct: 719  LQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILNKSSVERGMCHGQI 778

Query: 1328 YQVETVDLK-EDGKEKEGPRVFDRSRLDNSLNHMIDRDGFPHVGQVLKPKDPYCSIRNTT 1152
            YQ E +DL  ++ +   G + F RS  D S +  ID DG P+VGQ + P +PY SI +  
Sbjct: 779  YQTENIDLSDQNSRYDSGHKSFRRSTTDKSDHSTIDADGLPYVGQKIYPDEPYYSIYDEV 838

Query: 1151 TDKFEFKRVKGSGEEPVYVDYVAIDVNDSKKDPHKVNIRFRHPRNPIIGDKFSSRHGQKG 972
            T++   + +K  G +PV VD+V++D+  SKK P K NIRFRH RNPIIGDKFSSRHGQKG
Sbjct: 839  TNR--IRTIKRKGTDPVIVDFVSVDMK-SKKHPQKANIRFRHARNPIIGDKFSSRHGQKG 895

Query: 971  VCSQLWPDIDMPFSSVTGMRPDLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPF 792
            VCSQLWPDIDMPF+ VTGMRPDLIINPHAFPSRMTI MLLESIAAKGGSL+GKFVDATPF
Sbjct: 896  VCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPF 955

Query: 791  ASSTKVKDG-KSEKSSSLIDELGSQLVAKGFQYHGLEVMYSGFLGTEMACEIFIGPVYYQ 615
             ++    +G K  KSS L+D+LGS L  KGF Y+G E +YSG LG E+ CEIF+GPVYYQ
Sbjct: 956  RNAVINANGEKKRKSSLLVDDLGSMLKEKGFNYYGTEKLYSGILGVELECEIFMGPVYYQ 1015

Query: 614  RLRHMVSDKFQVRSTGIVDQITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHT 435
            RLRHMVSDKFQVRSTG VDQ+T QP          RFGEMERDS+LAHGA+YLLHDRLHT
Sbjct: 1016 RLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHT 1075

Query: 434  CSDHHIADVCSLCGSLLTTTSAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVA 255
             SDHHIADVCSLCGSLLT++ A   ++ + +   KLPPGR PKKVTC++CKTSKGMETVA
Sbjct: 1076 SSDHHIADVCSLCGSLLTSSIANVQQKKLIQVTGKLPPGRTPKKVTCYSCKTSKGMETVA 1135

Query: 254  MPYVFRYLAAELAAMNIKMTLKLTN 180
            MPYVFRYLAAELA+MNIKMTLKL++
Sbjct: 1136 MPYVFRYLAAELASMNIKMTLKLSD 1160