BLASTX nr result
ID: Papaver27_contig00017240
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00017240 (1222 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 426 e-116 ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 425 e-116 ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 425 e-116 ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 425 e-116 ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 422 e-115 ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 419 e-115 ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun... 416 e-113 sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymeras... 416 e-113 dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 413 e-113 sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 412 e-112 ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 406 e-110 gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus... 404 e-110 ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 397 e-108 sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras... 392 e-106 emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] 392 e-106 emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] 392 e-106 ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 392 e-106 sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymeras... 391 e-106 emb|CBL87031.1| RNA polymerase [Nuphar advena] 389 e-105 ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 388 e-105 >ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Citrus sinensis] Length = 1026 Score = 426 bits (1095), Expect = e-116 Identities = 226/410 (55%), Positives = 289/410 (70%), Gaps = 18/410 (4%) Frame = -3 Query: 1178 EDSIC--KVNLKPLELNP--FHQ--NGEVNVVRNFYYRCLGDTS--VSFSGNLSHPKGYA 1023 +DSI KV L++ P H+ +G + + N + +G TS V + N P+GYA Sbjct: 75 QDSILREKVKFGCLDMVPRGIHEVGSGRIGEILN-HEDYMGRTSFGVLKNDNFWCPRGYA 133 Query: 1022 SVAEAICTTDTEEDISVMDANQGEFQHEQEKEP---------KIVPGVGNAEYELLKRRQ 870 +VAEA+ +TD EED+S+++ Q E E +KE ++ G+G+ +Y +LK RQ Sbjct: 134 TVAEAVSSTDVEEDVSIVEEIQ-ELLQEMKKEQQSGGGRNRRRVARGMGSGKYRMLKMRQ 192 Query: 869 IKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCRQGT 690 +KIETEAWE+AA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA +QE CR Sbjct: 193 VKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAK 252 Query: 689 -KANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRIHNY 513 K YAPYFDQLPA+MMAV+TMHK+MG M+ +HG A+VVQAAC IG+AIEQEVRIH + Sbjct: 253 HKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKF 312 Query: 512 LEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIK 333 LEKT+KK + +EGDE + +Q +LR VR I+KGQ D+ K Sbjct: 313 LEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--DDFK 370 Query: 332 PWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKF 153 PWGQ+A AKVGSR+IELL Q+AYIQ P DQL+D PPDI PAF H+++T+ ++ S+K+ Sbjct: 371 PWGQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKY 430 Query: 152 GVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 GVIEC+PL+ +GLE+TA+HMVIPYMPMLVPP W YDKGAH FLPSYVM Sbjct: 431 GVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVM 480 >ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533046|gb|ESR44229.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 928 Score = 425 bits (1093), Expect = e-116 Identities = 226/413 (54%), Positives = 290/413 (70%), Gaps = 21/413 (5%) Frame = -3 Query: 1178 EDSIC--KVNLKPLELNP--FHQ--NGEVNVVRNFYYRCLGDTS--VSFSGNLSHPKGYA 1023 +DSI KV L++ P H+ +G + + N + +G TS V + N P+GYA Sbjct: 75 QDSILREKVKFGCLDMVPRGIHEVGSGRIGEILN-HEDYMGRTSFGVLKNDNFWCPRGYA 133 Query: 1022 SVAEAICTTDTEEDISVMDANQG---EFQHEQEKEP---------KIVPGVGNAEYELLK 879 +VAEA+ +TD EED+S+++ Q E + E+++E ++ G+G+ +Y +LK Sbjct: 134 TVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RQ+KIETEAWEQAA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA +QE CR Sbjct: 194 MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253 Query: 698 QGT-KANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 K YAPYFDQLPA+MMAV+TMHK+MG M+ +HG A+VVQAAC IG+AIEQEVRI Sbjct: 254 MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 H +LEKT+KK + +EGDE + +Q +LR VR I+KGQ D Sbjct: 314 HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--D 371 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 + KPWGQ+A AKVGSR+IELL Q+AYIQ P DQL D PPDI PAF H+++T+ ++ S Sbjct: 372 DFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGS 431 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 +K+GVIEC+PL+ +GLE+TA+HMVIPYMPMLVPP W YDKGAH FLPSYVM Sbjct: 432 KKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVM 484 >ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533045|gb|ESR44228.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 1030 Score = 425 bits (1093), Expect = e-116 Identities = 226/413 (54%), Positives = 290/413 (70%), Gaps = 21/413 (5%) Frame = -3 Query: 1178 EDSIC--KVNLKPLELNP--FHQ--NGEVNVVRNFYYRCLGDTS--VSFSGNLSHPKGYA 1023 +DSI KV L++ P H+ +G + + N + +G TS V + N P+GYA Sbjct: 75 QDSILREKVKFGCLDMVPRGIHEVGSGRIGEILN-HEDYMGRTSFGVLKNDNFWCPRGYA 133 Query: 1022 SVAEAICTTDTEEDISVMDANQG---EFQHEQEKEP---------KIVPGVGNAEYELLK 879 +VAEA+ +TD EED+S+++ Q E + E+++E ++ G+G+ +Y +LK Sbjct: 134 TVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RQ+KIETEAWEQAA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA +QE CR Sbjct: 194 MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253 Query: 698 QGT-KANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 K YAPYFDQLPA+MMAV+TMHK+MG M+ +HG A+VVQAAC IG+AIEQEVRI Sbjct: 254 MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 H +LEKT+KK + +EGDE + +Q +LR VR I+KGQ D Sbjct: 314 HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--D 371 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 + KPWGQ+A AKVGSR+IELL Q+AYIQ P DQL D PPDI PAF H+++T+ ++ S Sbjct: 372 DFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGS 431 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 +K+GVIEC+PL+ +GLE+TA+HMVIPYMPMLVPP W YDKGAH FLPSYVM Sbjct: 432 KKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVM 484 >ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] gi|557533044|gb|ESR44227.1| hypothetical protein CICLE_v10010966mg [Citrus clementina] Length = 933 Score = 425 bits (1093), Expect = e-116 Identities = 226/413 (54%), Positives = 290/413 (70%), Gaps = 21/413 (5%) Frame = -3 Query: 1178 EDSIC--KVNLKPLELNP--FHQ--NGEVNVVRNFYYRCLGDTS--VSFSGNLSHPKGYA 1023 +DSI KV L++ P H+ +G + + N + +G TS V + N P+GYA Sbjct: 75 QDSILREKVKFGCLDMVPRGIHEVGSGRIGEILN-HEDYMGRTSFGVLKNDNFWCPRGYA 133 Query: 1022 SVAEAICTTDTEEDISVMDANQG---EFQHEQEKEP---------KIVPGVGNAEYELLK 879 +VAEA+ +TD EED+S+++ Q E + E+++E ++ G+G+ +Y +LK Sbjct: 134 TVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGSGKYRMLK 193 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RQ+KIETEAWEQAA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA +QE CR Sbjct: 194 MRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCR 253 Query: 698 QGT-KANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 K YAPYFDQLPA+MMAV+TMHK+MG M+ +HG A+VVQAAC IG+AIEQEVRI Sbjct: 254 MAKHKVAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRI 313 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 H +LEKT+KK + +EGDE + +Q +LR VR I+KGQ D Sbjct: 314 HKFLEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQ--D 371 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 + KPWGQ+A AKVGSR+IELL Q+AYIQ P DQL D PPDI PAF H+++T+ ++ S Sbjct: 372 DFKPWGQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGS 431 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 +K+GVIEC+PL+ +GLE+TA+HMVIPYMPMLVPP W YDKGAH FLPSYVM Sbjct: 432 KKYGVIECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVM 484 >ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed protein product [Vitis vinifera] Length = 1035 Score = 422 bits (1086), Expect = e-115 Identities = 224/375 (59%), Positives = 272/375 (72%), Gaps = 13/375 (3%) Frame = -3 Query: 1088 YRCLGDTSVSFSGNLSHPKGYASVAEAICTTDTEEDISVMDANQ---GEFQHEQEKEP-- 924 + CL + + FSG PK YASVAEA+ +TD EED+S D Q GE + E++++ Sbjct: 121 FGCLRN-QMGFSGFC--PKSYASVAEAVSSTDVEEDVSASDEIQELLGEMKKEEKRQVNF 177 Query: 923 ------KIVPGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKS 762 K+ G+ Y L+RRQ+KIETEAWE AAKEYKELL DMCEQKLAPNLPYMKS Sbjct: 178 KRREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKS 237 Query: 761 LFLGWFEPLRNCIAADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHG 585 LFLGWFEPLR+ I +QELCR G KA YAPYFDQLPA+MM+V+TMHK++G M+ +HG Sbjct: 238 LFLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHG 297 Query: 584 TAKVVQAACQIGEAIEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXX 405 + +VVQAAC IG+AIEQEVRIHN+LEKT++K K K+ EG DP +Q +LR Sbjct: 298 STRVVQAACVIGDAIEQEVRIHNFLEKTKRKK-VGKDKNVEGGGFDPVIHEQEKLRKKVT 356 Query: 404 XXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVD-QLSDGP 228 R I+KG D KPWG EA AKVGSRLIELL+Q+AYIQPPVD QL+D P Sbjct: 357 NLMKKQKLHAARQIVKGH--DNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTP 414 Query: 227 PDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWI 48 PDIRPAF H+ KT+ ++ + R+FGVIECDPL+ +GLE+TA+HMVIPY+PMLVPP W Sbjct: 415 PDIRPAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWT 474 Query: 47 RYDKGAHLFLPSYVM 3 YDKGAHLFLPSYVM Sbjct: 475 GYDKGAHLFLPSYVM 489 >ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis vinifera] Length = 978 Score = 419 bits (1078), Expect = e-115 Identities = 216/365 (59%), Positives = 275/365 (75%), Gaps = 9/365 (2%) Frame = -3 Query: 1070 TSVSFSGNLSHPKGYASVAEAICTTDTEEDISVMD--------ANQGEFQHEQEKEPKIV 915 T V+F G + KGYAS AEAI + EED+S +D N+G+ + EK+PK++ Sbjct: 79 TPVNFFGLFGYQKGYASAAEAIAS---EEDMSGVDEVQELVEEVNKGD---KLEKQPKLI 132 Query: 914 PGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPL 735 GV ++ +L+RRQIK+ETEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPL Sbjct: 133 GGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPL 192 Query: 734 RNCIAADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAAC 558 R+ IAA+Q+LC+QG +A YAPYFD LPA+MMAV+TMHK+MG M+ + +G+A+VVQAAC Sbjct: 193 RDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAAC 252 Query: 557 QIGEAIEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXX 378 IGEAIE EVRI ++EKT+KK A + +G +P +Q +LR Sbjct: 253 HIGEAIEHEVRIQRFMEKTKKK--SASSNNPDGGS-NPVTKEQEKLRKKVSMLMKKQKLQ 309 Query: 377 XVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHS 198 VR I+K Q D+ KPWGQ+A+ KVGSRLIELLI++AYIQPP DQL DGPPDIRPAF H+ Sbjct: 310 QVRQIVKRQ--DDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHT 367 Query: 197 MKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFL 18 +KT+ ++ +R++GVIECDPL+ +GLEKTA+HMVIPYMPMLVPP +W YDKGA+LFL Sbjct: 368 LKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFL 427 Query: 17 PSYVM 3 PSYVM Sbjct: 428 PSYVM 432 >ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica] gi|462411068|gb|EMJ16117.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica] Length = 1024 Score = 416 bits (1069), Expect = e-113 Identities = 212/357 (59%), Positives = 257/357 (71%), Gaps = 12/357 (3%) Frame = -3 Query: 1037 PKGYASVAEAICTTDTEEDISVMDANQG-----------EFQHEQEKEPKIVPGVGNAEY 891 PKGYASVAEA+ +TD EE++SV+D Q E Q++Q G+G +Y Sbjct: 127 PKGYASVAEAVSSTDVEEEVSVVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKY 186 Query: 890 ELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQ 711 +LKRRQIKIETEAWE+AAKEY+EL+ DMCEQKLAPNLPYMKSLFLGWFEPLRN I +Q Sbjct: 187 HMLKRRQIKIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQ 246 Query: 710 ELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQ 534 +LCR+G K YAPY DQLPA+MM+V+TMHK+MG M+ +HGT +VV AAC IGEAIEQ Sbjct: 247 DLCRKGKNKTAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQ 306 Query: 533 EVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKG 354 EVRIH +LE TRKK + K +E E D ++ +L VR I+ Sbjct: 307 EVRIHKFLEMTRKKKVD---KDQENGESDAAKKEREKLNKKVTNLMKKQKLKAVRGIVS- 362 Query: 353 QEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDS 174 + D K W EA AKVGSRLIELL Q+A+IQPP DQL+DGPPDIRPAF H+ +T+ D+ Sbjct: 363 -KHDASKSWSLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDA 421 Query: 173 LNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 N SR++GVIECDPL+ +GLEKTA+HMVIPYMPMLVPP +W YDKG + FLPSYVM Sbjct: 422 KNASRRYGVIECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVM 478 >sp|Q8VWF8.2|RPOT2_NICSY RecName: Full=DNA-directed RNA polymerase 2, chloroplastic/mitochondrial; AltName: Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 2; Flags: Precursor gi|21425639|emb|CAC82575.2| phage-type RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 416 bits (1069), Expect = e-113 Identities = 223/413 (53%), Positives = 285/413 (69%), Gaps = 21/413 (5%) Frame = -3 Query: 1178 EDSICKVNLKPLELNPFHQNGEVNVVRNFYYRCLGDTSVS-------FSGNLSHPKGYAS 1020 +DSI K N K L P + V +N GD +S + N K YAS Sbjct: 67 QDSIFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYAS 126 Query: 1019 VAEAIC--TTDTEEDISVMDA-----------NQGEFQHEQEKEPKIVPGVGNAEYELLK 879 VAEA+ +TD EED+SV+D + +F + K+ + G+G+ +Y+ LK Sbjct: 127 VAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLK 186 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RRQ+K+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA +QELC Sbjct: 187 RRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCS 246 Query: 698 QG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 QG +KA YA YF QLPA+MMAV+TMHK+MG M+ DHGTA+VVQAA IG+AIEQEVRI Sbjct: 247 QGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRI 306 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 HN+LEKT+K+ E + ++G+ E Q +LR V I++ Q D Sbjct: 307 HNFLEKTKKQKAEKDKQKEDGEHVTQE---QEKLRKKVTNLMKKQKLRAVGQIVRRQ--D 361 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 + KPWGQ+A AKVGSRLI+LL+Q+AYIQPP +QL+ PPDIRPAF HS++T+ ++ + S Sbjct: 362 DSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSAS 421 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 R++G+I+CD L+F+GLE+TA+HMVIPYMPMLVPP W YDKG HL+LPSYVM Sbjct: 422 RRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVM 474 >dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] gi|17221595|dbj|BAB78465.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 1020 Score = 413 bits (1062), Expect = e-113 Identities = 222/413 (53%), Positives = 284/413 (68%), Gaps = 21/413 (5%) Frame = -3 Query: 1178 EDSICKVNLKPLELNPFHQNGEVNVVRNFYYRCLGDTSVS-------FSGNLSHPKGYAS 1020 +DSI K N K L P + V +N GD +S + N K YAS Sbjct: 67 QDSIFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLIKNQVNNNFCCRKSYAS 126 Query: 1019 VAEAIC--TTDTEEDISVMDA-----------NQGEFQHEQEKEPKIVPGVGNAEYELLK 879 VAEA+ +TD EED+SV+D + +F + K+ + G+G+ +Y+ LK Sbjct: 127 VAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTLK 186 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RRQ+K+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA +QELC Sbjct: 187 RRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCS 246 Query: 698 QG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 QG +KA YA YF QLPA+MMAV+TMHK+MG M+ DHGTA+VVQAA IG+AIEQEVRI Sbjct: 247 QGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRI 306 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 HN+LEKT+K+ E + ++G+ E Q +LR V I++ Q D Sbjct: 307 HNFLEKTKKQKAEKDKQKEDGEHVTQE---QEKLRKKVTNLMKKQKLRAVGQIVRRQ--D 361 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 + KPWGQ+A AKVGSRLI+LL+Q+AYIQPP +QL+ PPDI PAF HS++T+ ++ + S Sbjct: 362 DSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSAS 421 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 R++G+I+CD L+F+GLE+TA+HMVIPYMPMLVPP W YDKG HL+LPSYVM Sbjct: 422 RRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVM 474 >sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial; AltName: Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 2B; Flags: Precursor gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast RNA polymerase [Nicotiana tabacum] Length = 1021 Score = 412 bits (1060), Expect = e-112 Identities = 223/414 (53%), Positives = 284/414 (68%), Gaps = 22/414 (5%) Frame = -3 Query: 1178 EDSICKVNLKPLELNPFHQNGEVNVVRNFYYRCLGDTSVSF--------SGNLSHPKGYA 1023 +DS+ K N K L P + V +N GD +S S + K YA Sbjct: 67 QDSVFKDNTKFRSLIPISCSNIVMGFQNLGEYLPGDEFLSRPLLKNQVNSNDFCCRKSYA 126 Query: 1022 SVAEAIC--TTDTEEDISVMDANQG-----------EFQHEQEKEPKIVPGVGNAEYELL 882 SVAEA+ +TD EED+SV+D Q +F + K+ + G+G+ +Y+ L Sbjct: 127 SVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLTSGMGHRKYQTL 186 Query: 881 KRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELC 702 KRRQ+K+ETEAWEQAAKEYKELL DMCEQKLAPNLPY+KSLFLGWFEPLR+ IA +QELC Sbjct: 187 KRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELC 246 Query: 701 RQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVR 525 QG +KA YA Y QLPA+MMAV+TMHK+MG M+ DHGTA+VVQAA IG+AIEQEVR Sbjct: 247 SQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVR 306 Query: 524 IHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEE 345 IHN+LEKT+K+ E + ++G+ E Q +LR V I++ Q Sbjct: 307 IHNFLEKTKKQKAEKDKQKEDGEHVTQE---QEKLRKKVTNLMKKQKLRAVGQIVRRQ-- 361 Query: 344 DEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNL 165 D+ KPWGQ+A AKVGSRLIELL+Q+AYIQPP +QL+ PPDIRPAF HS++T+ ++ + Sbjct: 362 DDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSA 421 Query: 164 SRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 SR++G+I+CD L+F+GLE+TA+HMVIPYMPMLVPP W YDKG HL+LPSYVM Sbjct: 422 SRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVM 475 >ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica] gi|462422319|gb|EMJ26582.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica] Length = 1006 Score = 406 bits (1043), Expect = e-110 Identities = 211/377 (55%), Positives = 271/377 (71%), Gaps = 26/377 (6%) Frame = -3 Query: 1055 SGNLSHPKGYASVAEAICTTDTEEDIS------------VMDANQGEFQHEQEKEPKIVP 912 SG ++ KGYASVAEAI +TD EED S + + N E +Q K ++V Sbjct: 88 SGFCNYAKGYASVAEAIASTDGEEDSSGSEEIQEMLEDLIRENNMVESHFKQPK--RVVV 145 Query: 911 GVGNAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLR 732 G+G +Y LL++RQIK+ETEAW++AAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLR Sbjct: 146 GMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLFLGWFEPLR 205 Query: 731 NCIAADQELCRQ-GTKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDH-GTAKVVQAAC 558 + IAADQ+ C+Q ++ ++APYFD LPA+ MAV+TMHK+MG M+++ G+ +VVQAAC Sbjct: 206 DAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGSVRVVQAAC 265 Query: 557 QIGEAIEQEVRIHNYLEKTRKKPGEAKGKS------------KEGDEPDPEAIKQARLRX 414 IGEAIE EVRIH +LEKT+KK K+ K DE + +Q RLR Sbjct: 266 AIGEAIEHEVRIHRFLEKTKKKKNTIDKKAEADSVPVTIEQEKLADEQEKLTKEQERLRK 325 Query: 413 XXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSD 234 VR I+K E++++KPWGQEAH KVG RLI+LL+ +AYIQPPVDQ+ D Sbjct: 326 KVNKLIKRQKMQQVRGIVK--EQEDLKPWGQEAHVKVGCRLIQLLMDTAYIQPPVDQIGD 383 Query: 233 GPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPES 54 GPPDIRPAF H++KTI D+ SR++GVIECDP++ +G+EKTA+HMV+PYMPMLVPP + Sbjct: 384 GPPDIRPAFVHNLKTITRDTQKTSRRYGVIECDPIVRKGMEKTARHMVMPYMPMLVPPIN 443 Query: 53 WIRYDKGAHLFLPSYVM 3 W YD+GA+LFLPSYVM Sbjct: 444 WTGYDRGAYLFLPSYVM 460 >gb|EYU28900.1| hypothetical protein MIMGU_mgv1a000798mg [Mimulus guttatus] Length = 983 Score = 404 bits (1039), Expect = e-110 Identities = 205/353 (58%), Positives = 264/353 (74%), Gaps = 9/353 (2%) Frame = -3 Query: 1034 KGYASVAEAICTTDTEEDISVMDA--------NQGEFQHEQEKEPKIVPGVGNAEYELLK 879 +GYA+ AEA+ +T EE + + N + ++K+PK+V G+G +Y L+ Sbjct: 92 RGYAAAAEALVSTSEEEVDELQELIEEINKEINVKSTDNREQKQPKLVGGMGLGKYNSLR 151 Query: 878 RRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCR 699 RRQIKIETEAWE AAKEY+ELLEDMCEQKLAPNLPY+KSLFLGWFEPLR+ IAA+Q+LC+ Sbjct: 152 RRQIKIETEAWENAAKEYQELLEDMCEQKLAPNLPYIKSLFLGWFEPLRDAIAAEQDLCK 211 Query: 698 QG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRI 522 +G + YAPYFDQLPAEMMAV+TMHK+MG M+ +G+A+VVQAAC IGEAIE EVRI Sbjct: 212 EGKNRGAYAPYFDQLPAEMMAVITMHKLMGLLMTGGGNGSARVVQAACHIGEAIEHEVRI 271 Query: 521 HNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEED 342 H +L+ ++K S+EG PDPEA +Q RLR VR+I++ Q D Sbjct: 272 HKFLDNCKRK-NALNRTSEEG--PDPEAKEQDRLRKKVKILMKKQKVQQVRNIVRHQ--D 326 Query: 341 EIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLS 162 ++KPWGQ+A KVG RLI++L Q+AYIQPPVDQ DG PDIRPAF H++K +++L S Sbjct: 327 DLKPWGQDAQVKVGCRLIQILTQTAYIQPPVDQRDDGAPDIRPAFVHTLKC--VETLKGS 384 Query: 161 RKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 R++GVIECDPL+ +G+EKTA+HMVIPYMPMLVPP +W Y++GA+LFLPSY+M Sbjct: 385 RRYGVIECDPLVRKGMEKTARHMVIPYMPMLVPPLNWTGYERGAYLFLPSYMM 437 >ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda] gi|548846502|gb|ERN05778.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda] Length = 1006 Score = 397 bits (1020), Expect = e-108 Identities = 208/361 (57%), Positives = 262/361 (72%), Gaps = 17/361 (4%) Frame = -3 Query: 1034 KGYASVAEAICTTDTEEDIS--------VMDAN----QGEFQHEQEK-EPK--IVPGV-G 903 KG+A+ AEA+ +TD +ED S V+ N G + E+EK +PK GV G Sbjct: 104 KGFANAAEAVVSTDIDEDCSSGSEETHLVLPTNGYNSNGAIREEREKLKPKNGYKDGVMG 163 Query: 902 NAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCI 723 A+Y L+ RQ+KIETEAW+QAAKEY+EL+ DMCE KLAPNLPYMKSLFLGWFEPLR+ I Sbjct: 164 KAKYLALRTRQVKIETEAWDQAAKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPLRDII 223 Query: 722 AADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGE 546 A++Q + G K YAPYF QLPA+MM+V+TMHK+MG M+ D+G+ ++VQAACQIGE Sbjct: 224 ASEQASYKAGKNKGAYAPYFMQLPADMMSVITMHKLMGLLMTGTDNGSTRLVQAACQIGE 283 Query: 545 AIEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRH 366 AIEQEV+IH + EKT+KK K K +G+EP+ ++ LR VR Sbjct: 284 AIEQEVKIHRFFEKTKKKSD--KEKKLDGEEPNEGDKEKESLRKRVTNLMKKQKLHQVRK 341 Query: 365 IIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTI 186 I+KGQ D+ KPWG + HAKVGSRLIELLI++AY+QPPVDQ ++GPPDIRPAF+H +KT+ Sbjct: 342 IVKGQ--DDAKPWGIDIHAKVGSRLIELLIETAYVQPPVDQSAEGPPDIRPAFRHILKTV 399 Query: 185 KIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYV 6 + + R++GVIECDPLI +GLEKTA+HMVIPYMPMLVPP W YD+G HLFLPSYV Sbjct: 400 TKNDQKIRRRYGVIECDPLICKGLEKTARHMVIPYMPMLVPPVKWTGYDRGGHLFLPSYV 459 Query: 5 M 3 M Sbjct: 460 M 460 >sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName: Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 1B; Flags: Precursor Length = 1002 Score = 392 bits (1008), Expect = e-106 Identities = 213/400 (53%), Positives = 274/400 (68%), Gaps = 9/400 (2%) Frame = -3 Query: 1175 DSICKVNLKPLELNPFHQNGEVNVVRNFYYRCLGDTSVSFSGNLSHPKGYASVAEAICTT 996 + IC+ + K L QN + V+ + C SG+L + Y S AEAI +T Sbjct: 70 EGICEESSKNPHLG-LSQNSTFSSVKGDFRIC----GKRGSGSLGRLRSYGSAAEAIVST 124 Query: 995 DTEEDISVMDANQGEFQHEQE--------KEPKIVPGVGNAEYELLKRRQIKIETEAWEQ 840 +EEDI + E E E K+PK + G+G +Y L+RRQIK+ETEAWE+ Sbjct: 125 -SEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEE 183 Query: 839 AAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCRQG-TKANYAPYFD 663 AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IAA+Q+LC +G + YAP+FD Sbjct: 184 AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243 Query: 662 QLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKPGE 483 QLPAEMMAV+TMHK+MG M+ G+A+VVQAA IGEAIE E RIH +LEKT KK Sbjct: 244 QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKT-KKSNA 302 Query: 482 AKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKV 303 G +E P ++ RLR VR I+K ++D+ KPWGQ+ KV Sbjct: 303 LSGDLEE--TPGDMMKERERLRKKVKILMKKQKLRQVRKIVK--QQDDEKPWGQDNLVKV 358 Query: 302 GSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIF 123 G RLI++L+++AYIQPP DQL DGPPDIRPAF H++KT ++++ SR++GVI+CDPL+ Sbjct: 359 GCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKT--VETMKGSRRYGVIQCDPLVR 416 Query: 122 QGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 +GL+KTA+HMVIPYMPMLVPP+SW+ YDKG +LFLPSY+M Sbjct: 417 KGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIM 456 >emb|CAC82574.2| phage-type RNA polymerase [Nicotiana tabacum] Length = 1002 Score = 392 bits (1008), Expect = e-106 Identities = 213/400 (53%), Positives = 274/400 (68%), Gaps = 9/400 (2%) Frame = -3 Query: 1175 DSICKVNLKPLELNPFHQNGEVNVVRNFYYRCLGDTSVSFSGNLSHPKGYASVAEAICTT 996 + IC+ + K L QN + V+ + C SG+L + Y S AEAI +T Sbjct: 70 EGICEESSKNPHLG-LSQNSTFSSVKGDFRIC----GKRGSGSLGRLRSYGSAAEAIVST 124 Query: 995 DTEEDISVMDANQGEFQHEQE--------KEPKIVPGVGNAEYELLKRRQIKIETEAWEQ 840 +EEDI + E E E K+PK + G+G +Y L+RRQIK+ETEAWE+ Sbjct: 125 -SEEDIDEIQELIEEMDKENEALKANLQPKQPKTIGGMGVGKYNFLRRRQIKVETEAWEE 183 Query: 839 AAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQELCRQG-TKANYAPYFD 663 AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IAA+Q+LC +G + YAP+FD Sbjct: 184 AAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAAEQKLCDEGKNRGAYAPFFD 243 Query: 662 QLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQEVRIHNYLEKTRKKPGE 483 QLPAEMMAV+TMHK+MG M+ G+A+VVQAA IGEAIE E RIH +LEKT KK Sbjct: 244 QLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASYIGEAIEHEARIHRFLEKT-KKSNA 302 Query: 482 AKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKV 303 G +E P ++ RLR VR I+K ++D+ KPWGQ+ KV Sbjct: 303 LSGDLEE--TPGDMMKERERLRKKVKILMKKQKLRQVRKIVK--QQDDEKPWGQDNLVKV 358 Query: 302 GSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIF 123 G RLI++L+++AYIQPP DQL DGPPDIRPAF H++KT ++++ SR++GVI+CDPL+ Sbjct: 359 GCRLIQILMETAYIQPPNDQLDDGPPDIRPAFVHTLKT--VETMKGSRRYGVIQCDPLVR 416 Query: 122 QGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 +GL+KTA+HMVIPYMPMLVPP+SW+ YDKG +LFLPSY+M Sbjct: 417 KGLDKTARHMVIPYMPMLVPPQSWLGYDKGGYLFLPSYIM 456 >emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris] Length = 1002 Score = 392 bits (1007), Expect = e-106 Identities = 206/360 (57%), Positives = 261/360 (72%), Gaps = 9/360 (2%) Frame = -3 Query: 1055 SGNLSHPKGYASVAEAICTTDTEEDISVMDANQGEFQHEQE--------KEPKIVPGVGN 900 SG+L + Y S AEAI +T +EEDI + E E E K+PK + G+G Sbjct: 105 SGSLGFLRSYGSAAEAIAST-SEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGV 163 Query: 899 AEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIA 720 +Y LL+RRQIK+ETEAWE+AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA Sbjct: 164 GKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA 223 Query: 719 ADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEA 543 A+Q+LC +G + YAP+FDQLPAEMMAV+TMHK+MG M+ G+A+VVQAA IGEA Sbjct: 224 AEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEA 283 Query: 542 IEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHI 363 IE E RIH +LEKT KK G + D P ++ RLR VR I Sbjct: 284 IEHEARIHRFLEKT-KKSNALSGDLE--DTPGDIMKERERLRKKVKILMKKQKLQQVRKI 340 Query: 362 IKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIK 183 +K ++D+ KPWGQ+ KVG RLI++L+++AYIQPP DQL D PPDIRPAF H++KT Sbjct: 341 VK--QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKT-- 396 Query: 182 IDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 ++++ SR++GVI+CDPL+ +GL+KTA+HMVIPYMPMLVPP+SW+ YDKGA+LFLPSY+M Sbjct: 397 VETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIM 456 >ref|XP_004304185.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial-like [Fragaria vesca subsp. vesca] Length = 1262 Score = 392 bits (1006), Expect = e-106 Identities = 209/364 (57%), Positives = 256/364 (70%), Gaps = 19/364 (5%) Frame = -3 Query: 1037 PKGYASVAEAICTTDT------EEDISVMDANQGEFQHEQEKEPKI------------VP 912 PKGYASVAEAI +TD EE++ V+D Q E E +KE K V Sbjct: 362 PKGYASVAEAISSTDASSSTDAEEEVCVVDELQ-EILKEMKKEDKRQSAYRWRIEQARVR 420 Query: 911 GVGNAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLR 732 G+G +Y +L+RRQIKIETEAWE+AA EY+ELL DMCEQKLAPNLPYMKSLFLGWFEPL Sbjct: 421 GMGEGKYLMLRRRQIKIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLC 480 Query: 731 NCIAADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQ 555 N I +Q+LCRQG K Y PY D+LPA+MMAV+TMHK+MG M+ +HG+ +VV AAC Sbjct: 481 NAITKEQDLCRQGKNKTAYGPYMDKLPADMMAVITMHKLMGLLMTG-EHGSCRVVSAACT 539 Query: 554 IGEAIEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXX 375 IGEAIEQEV+IHN+LE+T+KK GK +E E D + +L Sbjct: 540 IGEAIEQEVKIHNFLERTKKK---KVGKDQETGESDAAMKENEKLNKKVTNLIEKKKLQA 596 Query: 374 VRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSM 195 VRHI++G D+ K W QEA AKVGSR+IELL Q+A+IQPP DQL D DIRPAF H+ Sbjct: 597 VRHIVRG--HDDSKAWSQEAKAKVGSRMIELLTQTAFIQPPADQLGDSLVDIRPAFVHTF 654 Query: 194 KTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLP 15 KT+ ++ N SR++GVIEC+PL+ +GLE+TA+HMVIPYMPMLVPP +W YDKG H +LP Sbjct: 655 KTVS-NAKNTSRRYGVIECNPLVLKGLERTARHMVIPYMPMLVPPLNWTGYDKGGHFYLP 713 Query: 14 SYVM 3 SYVM Sbjct: 714 SYVM 717 >sp|Q93Y94.1|RPOT1_NICSY RecName: Full=DNA-directed RNA polymerase 1, mitochondrial; AltName: Full=NsRpoT-A; AltName: Full=T7 bacteriophage-type single subunit RNA polymerase 1; Flags: Precursor gi|15824083|dbj|BAB69431.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana sylvestris] Length = 1002 Score = 391 bits (1004), Expect = e-106 Identities = 205/360 (56%), Positives = 261/360 (72%), Gaps = 9/360 (2%) Frame = -3 Query: 1055 SGNLSHPKGYASVAEAICTTDTEEDISVMDANQGEFQHEQE--------KEPKIVPGVGN 900 SG+L + Y S AEAI +T +EEDI + E E E K+PK + G+G Sbjct: 105 SGSLGFLRSYGSAAEAIAST-SEEDIDEIQELIEEMNKENEALKTNLQPKQPKTIGGMGV 163 Query: 899 AEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIA 720 +Y LL+RRQIK+ETEAWE+AAKEY+ELL DMCEQKLAPNLPYMKSLFLGWFEPLR+ IA Sbjct: 164 GKYNLLRRRQIKVETEAWEEAAKEYQELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIA 223 Query: 719 ADQELCRQG-TKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEA 543 A+Q+LC +G + YAP+FDQLPAEMMAV+TMHK+MG M+ G+A+VVQAA IGEA Sbjct: 224 AEQKLCDEGKNRGAYAPFFDQLPAEMMAVITMHKLMGLLMTGGGTGSARVVQAASHIGEA 283 Query: 542 IEQEVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHI 363 IE E RIH +LEKT KK G + D P ++ R+R VR I Sbjct: 284 IEHEARIHRFLEKT-KKSNALSGDLE--DTPGDIMKERERVRKKVKILMKKQKLQQVRKI 340 Query: 362 IKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIK 183 +K ++D+ KPWGQ+ KVG RLI++L+++AYIQPP DQL D PPDIRPAF H++KT Sbjct: 341 VK--QQDDEKPWGQDNLVKVGCRLIQILMETAYIQPPNDQLDDCPPDIRPAFVHTLKT-- 396 Query: 182 IDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 ++++ SR++GVI+CDPL+ +GL+KTA+HMVIPYMPMLVPP+SW+ YDKGA+LFLPSY+M Sbjct: 397 VETMKGSRRYGVIQCDPLVRKGLDKTARHMVIPYMPMLVPPQSWLGYDKGAYLFLPSYIM 456 >emb|CBL87031.1| RNA polymerase [Nuphar advena] Length = 990 Score = 389 bits (999), Expect = e-105 Identities = 205/357 (57%), Positives = 261/357 (73%), Gaps = 13/357 (3%) Frame = -3 Query: 1034 KGYASVAEAICTTDTEEDISVMDANQG---EFQHE--QEKEPKI-------VPGVGNAEY 891 +G+ASVAEA+ +TD ED S ++ +G F E +EKE + +G A+Y Sbjct: 102 QGFASVAEAVSSTD--EDTSAIEEIKGLVERFSEEVFKEKEGEFRGKRRTKFGNLGYAKY 159 Query: 890 ELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFLGWFEPLRNCIAADQ 711 LKRRQIKIETEAWEQAAKEYKEL+ DMC+ KLA NLPY+KSLFLGWFEPLR+ IA++Q Sbjct: 160 NALKRRQIKIETEAWEQAAKEYKELMMDMCKNKLAXNLPYIKSLFLGWFEPLRDRIASEQ 219 Query: 710 ELCRQGT-KANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTAKVVQAACQIGEAIEQ 534 E CR+G +A Y PY ++LPAEMMAV+TMHK++G M+S DHG A+VVQAAC+IG+AIE Sbjct: 220 EACRRGKCRAAYGPYLNRLPAEMMAVITMHKLVGLMMTSGDHGCARVVQAACRIGDAIEN 279 Query: 533 EVRIHNYLEKTRKKPGEAKGKSKEGDEPDPEAIKQARLRXXXXXXXXXXXXXXVRHIIKG 354 E RIH++LEKT+KK A+G E +EP+ ++ LR V ++KG Sbjct: 280 ESRIHSFLEKTKKK--HARGNMAE-EEPETVTKEKEFLRKKVTNLIKKQKLRQVTKLVKG 336 Query: 353 QEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDGPPDIRPAFKHSMKTIKIDS 174 + D+ PWG EAHAKVG LIELLI++AYIQPP+DQ DGPPDIRPAF+HS++ + + Sbjct: 337 K--DDSAPWGVEAHAKVGCHLIELLIETAYIQPPLDQTVDGPPDIRPAFRHSLRNVSKEQ 394 Query: 173 LNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESWIRYDKGAHLFLPSYVM 3 + SR++GVIECDPL+ +GL+KTA+H VIPYMPMLVPP W YDKGAHLFLPSY+M Sbjct: 395 SSNSRRYGVIECDPLVRKGLDKTARHTVIPYMPMLVPPLCWTGYDKGAHLFLPSYIM 451 >ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] gi|550332836|gb|EEE88785.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa] Length = 988 Score = 388 bits (996), Expect = e-105 Identities = 206/376 (54%), Positives = 264/376 (70%), Gaps = 18/376 (4%) Frame = -3 Query: 1076 GDTSVSFSGNLSHPKGYASVAEA-ICTTDTEEDISVMDANQGEFQ----HEQEKEP---- 924 GD + F + KGYA+ A A + ++ E D+S D QG + H Q+ EP Sbjct: 69 GDLTKPFDLSPFFFKGYATAAAADVIPSNDESDLSGSDDFQGLMEQVNKHFQKMEPQFRP 128 Query: 923 ---KIVPGVGNAEYELLKRRQIKIETEAWEQAAKEYKELLEDMCEQKLAPNLPYMKSLFL 753 K+V G+G +Y +LKRRQIK+ETEAWEQAA+EY+E+LEDMCEQKLAPNLPY+KSLFL Sbjct: 129 QEKKMVAGMGIGKYAILKRRQIKMETEAWEQAAQEYQEMLEDMCEQKLAPNLPYVKSLFL 188 Query: 752 GWFEPLRNCIAADQELCRQGTKANYAPYFDQLPAEMMAVVTMHKMMGFFMSSDDHGTA-K 576 GWFEPLR+ I A+QELC++ + ++ +F LPA+MMAV+TMHK+MG M+ + + + Sbjct: 189 GWFEPLRDAIVAEQELCKRNLRVSHRAHFSDLPADMMAVITMHKLMGLLMTGNGGSASIR 248 Query: 575 VVQAACQIGEAIEQEVRIHNYLEKTRKKPG-EAKGKSKEGDEPDPEAIK----QARLRXX 411 VVQAA +GEAIE E RIH +LEKT+K+ EAK E D E K Q +LR Sbjct: 249 VVQAASVVGEAIEHEGRIHKFLEKTKKRKNVEAKISEGESDAAIEEGEKLSKEQEKLRKK 308 Query: 410 XXXXXXXXXXXXVRHIIKGQEEDEIKPWGQEAHAKVGSRLIELLIQSAYIQPPVDQLSDG 231 VR I+KG D+ +PWGQE H KVGSRLI+L+I++AYIQPP+DQ+ DG Sbjct: 309 VTTLIKKQKVQQVRRIVKGH--DDSRPWGQEEHVKVGSRLIQLMIETAYIQPPIDQIGDG 366 Query: 230 PPDIRPAFKHSMKTIKIDSLNLSRKFGVIECDPLIFQGLEKTAKHMVIPYMPMLVPPESW 51 PPDIRPAF H++KTI D+ SR++GVIECDPL+ +GLEK+A+HMVIPYMPMLVPP +W Sbjct: 367 PPDIRPAFVHTLKTITKDTQKSSRRYGVIECDPLVRKGLEKSARHMVIPYMPMLVPPLNW 426 Query: 50 IRYDKGAHLFLPSYVM 3 YD+GAHLFLPSYVM Sbjct: 427 TGYDQGAHLFLPSYVM 442