BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00017215
         (1113 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29879.3| unnamed protein product [Vitis vinifera]              306   1e-80
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub...   306   1e-80
ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prun...   293   7e-77
ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobro...   290   7e-76
ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobro...   290   7e-76
ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform ...   290   7e-76
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni...   289   1e-75
ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I sub...   287   6e-75
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   287   6e-75
ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I sub...   286   8e-75
gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus...   285   2e-74
ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I sub...   285   3e-74
ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I sub...   282   2e-73
ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Popu...   280   1e-72
gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus...   278   4e-72
ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I sub...   277   5e-72
ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phas...   271   5e-70
ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I sub...   268   2e-69
ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citr...   267   7e-69
ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Me...   267   7e-69

>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score =  306 bits (784), Expect = 1e-80
 Identities = 172/339 (50%), Positives = 218/339 (64%), Gaps = 26/339 (7%)
 Frame = +2

Query: 14   NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXXDDVG 178
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1342 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1394

Query: 179  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFV 358
               N+     E  I D ++E   VP SKS   +   +               + DR   V
Sbjct: 1395 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1448

Query: 359  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-------- 514
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1449 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1508

Query: 515  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 658
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1509 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1568

Query: 659  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 835
            I EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1569 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1628

Query: 836  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1629 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1667


>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
            vinifera]
          Length = 1740

 Score =  306 bits (784), Expect = 1e-80
 Identities = 172/339 (50%), Positives = 218/339 (64%), Gaps = 26/339 (7%)
 Frame = +2

Query: 14   NDIEAEDLGVDAQKRKEQATDEMDYGE-----DGMETETSLVENVDAXXXXXXXXXDDVG 178
            +D  AEDLG+DAQKRK+QA+DEMDYG+     D  E    L E +D          D+V 
Sbjct: 1413 DDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPDEGEPSAGLTEEIDLVE-------DEVE 1465

Query: 179  NKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFV 358
               N+     E  I D ++E   VP SKS   +   +               + DR   V
Sbjct: 1466 ISNNE-----EVGISDPKDEDSKVP-SKSKSSKNKKAKTEAKRKKRFRAIKKDFDRAILV 1519

Query: 359  EAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-------- 514
            +AKG  FEVH RFT+EPHI+L+++ +KAA  VYI+ SG I+ C VID N+D         
Sbjct: 1520 KAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIRSSGKIDLCQVIDCNKDQVIYYGRDP 1579

Query: 515  ------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 658
                        KL ALQTAGVDF AFW M D+LD+ ++ SN++H +L T+GVEAARATI
Sbjct: 1580 KKRENIPGEEKKKLPALQTAGVDFTAFWKMQDELDVRYVYSNNVHAMLNTFGVEAARATI 1639

Query: 659  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 835
            I EV  VF+AYG+KVNIRHL+LIAD+MTH+G  RP +R+ GIA S SPFSKM+FETA+KF
Sbjct: 1640 IKEVFNVFNAYGVKVNIRHLSLIADFMTHSGGYRPMNRHGGIAESVSPFSKMTFETASKF 1699

Query: 836  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            IV+AA HG  D+LES SARICLGLPVK+GTG FDL+Q++
Sbjct: 1700 IVEAASHGMTDNLESASARICLGLPVKMGTGCFDLMQKI 1738


>ref|XP_007203063.1| hypothetical protein PRUPE_ppa000153mg [Prunus persica]
            gi|462398594|gb|EMJ04262.1| hypothetical protein
            PRUPE_ppa000153mg [Prunus persica]
          Length = 1612

 Score =  293 bits (751), Expect = 7e-77
 Identities = 167/353 (47%), Positives = 215/353 (60%), Gaps = 37/353 (10%)
 Frame = +2

Query: 5    GDANDIE----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDD 172
            G A+D E     ED G+DA KRK QATDEMDY EDG + E    +  D           +
Sbjct: 1261 GGADDGEHGEGVEDFGLDAHKRKLQATDEMDY-EDGCDDEVREADLSDGDE-------SE 1312

Query: 173  VGNKENDQ--GTDGEPQILDAEEEPKSVPASKSSDKREP---------GSXXXXXXXXXX 319
            +  +EN+   G DGE  ++DA +E    P  ++ D  +P         GS          
Sbjct: 1313 IDEEENEVEIGKDGEIGVIDANDEMPGSPLEEAGDLAKPKSKEKKTKSGSQIRKKRKVRA 1372

Query: 320  XXXXXESDRVFFVEAKGLDFEVHLRFTD-EPHIILSKVVEKAAKNVYIKRSGNIERCS-- 490
                 E+DR  FV AKG  FEVH RF D EPHI+LS++ +K A+ VYI+RSG +  C   
Sbjct: 1373 EMVKKETDRAIFVSAKGFHFEVHFRFADNEPHILLSQIAQKTAQKVYIQRSGKVADCKQI 1432

Query: 491  ------VIDYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHT 616
                  V+ + +D +            + ALQT G+DFG FW + D LD+ +I SN++H 
Sbjct: 1433 TCDENQVLCFGKDPENKQSFSSKEKKEMPALQTTGIDFGTFWQLQDVLDVRYIYSNNIHA 1492

Query: 617  VLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASST 793
            +L TYGVEAAR TII E+  VF +YGI VNIRHLTLIAD+MTH G  RP +R+ GI  S 
Sbjct: 1493 MLNTYGVEAARETIIREINNVFKSYGISVNIRHLTLIADFMTHAGGYRPLNRFGGIVESI 1552

Query: 794  SPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            SPF+KM+FETA+KFIV+AAYHG+VD LE+PSARICLGLPV VGTG FDL+ ++
Sbjct: 1553 SPFNKMTFETASKFIVEAAYHGQVDRLETPSARICLGLPVNVGTGCFDLMHKM 1605


>ref|XP_007028856.1| Nuclear RNA polymerase A1 isoform 4 [Theobroma cacao]
            gi|508717461|gb|EOY09358.1| Nuclear RNA polymerase A1
            isoform 4 [Theobroma cacao]
          Length = 1397

 Score =  290 bits (742), Expect = 7e-76
 Identities = 168/339 (49%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVG 178
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1060 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1118

Query: 179  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVF 352
              + N  G+D G+ +I  ++  P     S    + E                  ESDR  
Sbjct: 1119 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1176

Query: 353  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 508
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1177 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1236

Query: 509  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 658
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1237 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1296

Query: 659  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 835
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1297 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1356

Query: 836  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1357 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1395


>ref|XP_007028855.1| Nuclear RNA polymerase A1 isoform 3 [Theobroma cacao]
            gi|508717460|gb|EOY09357.1| Nuclear RNA polymerase A1
            isoform 3 [Theobroma cacao]
          Length = 1400

 Score =  290 bits (742), Expect = 7e-76
 Identities = 168/339 (49%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVG 178
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1063 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1121

Query: 179  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVF 352
              + N  G+D G+ +I  ++  P     S    + E                  ESDR  
Sbjct: 1122 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1179

Query: 353  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 508
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1180 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1239

Query: 509  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 658
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1240 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1299

Query: 659  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 835
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1300 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1359

Query: 836  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1360 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1398


>ref|XP_007028854.1| Nuclear RNA polymerase A1, putative isoform 2 [Theobroma cacao]
            gi|508717459|gb|EOY09356.1| Nuclear RNA polymerase A1,
            putative isoform 2 [Theobroma cacao]
          Length = 1689

 Score =  290 bits (742), Expect = 7e-76
 Identities = 168/339 (49%), Positives = 213/339 (62%), Gaps = 22/339 (6%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVG 178
            + DA+D E AEDLG+DAQK+K+Q TDEMDY ED  E E +   ++ A         D+ G
Sbjct: 1352 DDDADDEERAEDLGLDAQKQKQQTTDEMDY-EDDSEVEQNEGASLAALESEIDMSEDETG 1410

Query: 179  NKE-NDQGTD-GEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVF 352
              + N  G+D G+ +I  ++  P     S    + E                  ESDR  
Sbjct: 1411 TIQINMIGSDNGKDEI--SQSSPNLENRSNPKSREEKTGSEPKRKKMKAKFVRKESDRAI 1468

Query: 353  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNR 508
            F   +GL FEVH +  +EPHI+L+++ EK AK VYI+  G I++C V D        Y  
Sbjct: 1469 FNAIRGLCFEVHFKLKNEPHILLAQIAEKTAKKVYIQSFGKIDQCRVTDCSENQVFYYGE 1528

Query: 509  DAK----------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATI 658
            D K          + AL T GVDFGAFW M D +D+ ++ SN +H +L TYGVEAAR TI
Sbjct: 1529 DPKKRKSPSDKEKIQALHTTGVDFGAFWKMEDHIDVRYLYSNSIHAMLNTYGVEAARETI 1588

Query: 659  INEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFETAAKF 835
            I E+  VF +YGI VNIRHLTLIAD+MTH+G  RP SR  GIA S SPFSKMSFETA+KF
Sbjct: 1589 IREISHVFTSYGIAVNIRHLTLIADFMTHSGRYRPMSRLGGIAESISPFSKMSFETASKF 1648

Query: 836  IVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            IV+AA HG VD+LE+PS+RICLGLPVK+GTGSFDL+Q+V
Sbjct: 1649 IVEAAKHGLVDNLETPSSRICLGLPVKMGTGSFDLMQKV 1687


>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
            communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
            polymerase I largest subunit, putative [Ricinus communis]
          Length = 1686

 Score =  289 bits (740), Expect = 1e-75
 Identities = 170/349 (48%), Positives = 214/349 (61%), Gaps = 32/349 (9%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVG 178
            + D +D E A+DLG+DAQKRK QATDEMDY +DG E E +  E+  +          D G
Sbjct: 1338 DNDDDDGERADDLGLDAQKRKLQATDEMDY-DDGFEEELNEGESTASEEESGFESEIDQG 1396

Query: 179  NKE----NDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXES-- 340
            + E    ND   D E        +P S P SK      P                 +S  
Sbjct: 1397 DNETEISNDVMLDNEASETLPLRKP-SKPKSKKKAAESPSHGEKSKDKKKKPKAKRKSRI 1455

Query: 341  ----DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--- 499
                DR  FVEA+ + FEVH +FT+EPHI+L+++ +K AK VYI+  G IE+C V D   
Sbjct: 1456 SKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVYIQNPGKIEQCRVTDCKE 1515

Query: 500  -----YNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRT 628
                 Y +D K            + AL   GVDF  FW M D LD+ +I SN++H +L+T
Sbjct: 1516 SQVIYYGKDPKERVDLKPDVKEKVPALHATGVDFNTFWKMQDHLDVRYIYSNNIHAMLKT 1575

Query: 629  YGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFS 805
            YGVEAAR TII E+  VF +YGI V+ RHL+LIAD+MTHTG  RP SR  GIA S SPFS
Sbjct: 1576 YGVEAARETIIREINHVFKSYGIAVSNRHLSLIADFMTHTGGYRPMSRMGGIAESISPFS 1635

Query: 806  KMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            KMSFETA+KFIV+AA HGE+D+LE+PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1636 KMSFETASKFIVEAALHGEIDNLETPSARICLGLPVKMGTGSFDLMQKL 1684


>ref|XP_006351332.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            tuberosum]
          Length = 1675

 Score =  287 bits (734), Expect = 6e-75
 Identities = 151/337 (44%), Positives = 207/337 (61%), Gaps = 20/337 (5%)
 Frame = +2

Query: 2    EGDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVGN 181
            + +  D   EDL  DAQKRK+Q TDEMDY +D  E E      ++          D+ G+
Sbjct: 1338 DDEDEDERTEDLSSDAQKRKQQTTDEMDYDDDENEDEAETTAEIEDEKSEQTDEIDN-GD 1396

Query: 182  KENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVE 361
            +E       E Q+   +     +  +KSS  +                   +SDR  FV+
Sbjct: 1397 EEEIGNRGNEEQMSKLQSTEDDISNTKSSKSKTKTKTTVKQNKKKERRSKKDSDRCVFVD 1456

Query: 362  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDY------------- 502
             +GL FEVH RF +EPHI+L++V +K AK VYIK SG I++C ++ Y             
Sbjct: 1457 VEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYIKNSGKIDQCRMVKYEVTENTVMWDEYQ 1516

Query: 503  ------NRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIIN 664
                  + D+   AL+ AGVDFG FW+M DDLD+  I +N++  +L TYGVEAARA+I+ 
Sbjct: 1517 TKQQSQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARASILR 1576

Query: 665  EVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFETAAKFIV 841
            EVK VF  YG++++ RHL+LIAD+MTHTG  +P SR+G I+ S SPF KMSFETA+KFIV
Sbjct: 1577 EVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIV 1636

Query: 842  DAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            +AA HG  D+LE+PS+RICLGLPVK+GTG FD++Q++
Sbjct: 1637 EAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQKL 1673


>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
            RPA1-like [Cucumis sativus]
          Length = 1652

 Score =  287 bits (734), Expect = 6e-75
 Identities = 160/345 (46%), Positives = 212/345 (61%), Gaps = 28/345 (8%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDG------METETSLVENVDAXXXXXXX 160
            + + ND++ AEDLG D +K+K QA DEMDY +D        E+ T     VD        
Sbjct: 1316 DDEGNDLDVAEDLGSDXEKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEIT 1375

Query: 161  XXDDVGNKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXES 340
              D +     D  ++ +P+I+D          SKS  K +                  E+
Sbjct: 1376 NNDMI-EIVKDSASENQPEIVDV---------SKSMSKEKTTETSKEKKKVKSELVRKET 1425

Query: 341  DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-- 514
            DR  FVEAK   FEVH +FT+EPH +LS++V++AA+ V I+RSG I +C  I        
Sbjct: 1426 DRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVI 1485

Query: 515  ------------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVE 640
                              K+ ALQT+GVDF   W+M D+LD+ +I SND+H +L+TYGVE
Sbjct: 1486 YHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVE 1545

Query: 641  AARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSF 817
            AARATII E++ +F +YGI VNIRHL+L+ADYMTH+G  RP SR  GI+ S SPFS+M+F
Sbjct: 1546 AARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTF 1605

Query: 818  ETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            ETA KFIV AA HGEVD+LE+PS+RICLGLPVK+GTGSFDL+Q++
Sbjct: 1606 ETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKI 1650


>ref|XP_004136744.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Cucumis
            sativus]
          Length = 1650

 Score =  286 bits (733), Expect = 8e-75
 Identities = 160/345 (46%), Positives = 212/345 (61%), Gaps = 28/345 (8%)
 Frame = +2

Query: 2    EGDANDIE-AEDLGVDAQKRKEQATDEMDYGEDG------METETSLVENVDAXXXXXXX 160
            + + ND++ AEDLG D +K+K QA DEMDY +D        E+ T     VD        
Sbjct: 1314 DDEGNDLDVAEDLGSDMKKQKLQANDEMDYEDDSEDDLNAKESSTGFESEVDQGDEAEIT 1373

Query: 161  XXDDVGNKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXES 340
              D +     D  ++ +P+I+D          SKS  K +                  E+
Sbjct: 1374 NNDMI-EIVKDSASENQPEIVDV---------SKSMSKEKTTETSKEKKKVKSELVRKET 1423

Query: 341  DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDA-- 514
            DR  FVEAK   FEVH +FT+EPH +LS++V++AA+ V I+RSG I +C  I        
Sbjct: 1424 DRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGKIIQCQQITCKEGQVI 1483

Query: 515  ------------------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVE 640
                              K+ ALQT+GVDF   W+M D+LD+ +I SND+H +L+TYGVE
Sbjct: 1484 YHGNNLKERKNLKPEEKEKIPALQTSGVDFKTLWEMQDELDVRYIYSNDIHAMLQTYGVE 1543

Query: 641  AARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSF 817
            AARATII E++ +F +YGI VNIRHL+L+ADYMTH+G  RP SR  GI+ S SPFS+M+F
Sbjct: 1544 AARATIIREIQNIFTSYGISVNIRHLSLVADYMTHSGGYRPMSRLGGISDSISPFSRMTF 1603

Query: 818  ETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            ETA KFIV AA HGEVD+LE+PS+RICLGLPVK+GTGSFDL+Q++
Sbjct: 1604 ETAGKFIVQAALHGEVDNLETPSSRICLGLPVKMGTGSFDLMQKI 1648


>gb|EXC04356.1| DNA-directed RNA polymerase I subunit rpa1 [Morus notabilis]
          Length = 1770

 Score =  285 bits (730), Expect = 2e-74
 Identities = 164/343 (47%), Positives = 208/343 (60%), Gaps = 27/343 (7%)
 Frame = +2

Query: 5    GDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVGNK 184
            GD ++   EDLG+DA K+K QATDEMDY +D  E          +         DD    
Sbjct: 1432 GDGDNEGQEDLGLDAVKQKRQATDEMDYDDDYDERVNEEATRAGSESE------DDNDED 1485

Query: 185  ENDQGTDGEPQILDAE----EEPKSVPASKSSD--KREPGSXXXXXXXXXXXXXXXESDR 346
            E +   D E ++LDA+    E P       +S+  K +  S               + DR
Sbjct: 1486 EVEFRKDNEVEMLDAKGGHLESPSKAEGFSTSESLKTKTKSRAKGKKKIRRQFNRKDDDR 1545

Query: 347  VFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VIDY 502
              FVEAKG  F+VH RF++E HI+L+++ +  A  VYI+ SG ++ C         VI Y
Sbjct: 1546 SIFVEAKGFYFKVHFRFSNEAHILLAQIAQNTATRVYIQSSGKVDNCQQITCKENQVIYY 1605

Query: 503  NRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAA 646
             +D K            + ALQT+GVDF  FW + D LD+ +I SND+H +L TYGVEAA
Sbjct: 1606 GKDPKSRDDIPLEEKENIPALQTSGVDFMTFWKLQDILDVRYIYSNDIHAMLNTYGVEAA 1665

Query: 647  RATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFSKMSFET 823
            R TII E+  VF +YGI VNIRHLTLIAD+MTHTG  R  SR+ GIA S SPFSKM FET
Sbjct: 1666 RETIIREITNVFKSYGISVNIRHLTLIADFMTHTGGYRSMSRHGGIADSISPFSKMCFET 1725

Query: 824  AAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            A+KFIV+AAYH E+DDLE+PSARICLGLPVKVGTG FDL+Q++
Sbjct: 1726 ASKFIVEAAYHREMDDLETPSARICLGLPVKVGTGCFDLMQKL 1768


>ref|XP_004249758.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Solanum
            lycopersicum]
          Length = 1677

 Score =  285 bits (728), Expect = 3e-74
 Identities = 156/341 (45%), Positives = 210/341 (61%), Gaps = 24/341 (7%)
 Frame = +2

Query: 2    EGDANDIEAEDLGVDAQKRKEQATDEMDYG--EDGMETETSLVENVDAXXXXXXXXXDDV 175
            + D  D   EDL  DAQKRK+Q TDEMDY   ED  E E      ++          D+ 
Sbjct: 1340 DDDDEDERTEDLSSDAQKRKQQTTDEMDYDDDEDEAEAEAEATAEIEDEKSEQTDEIDNG 1399

Query: 176  GNKEN-DQGTDGEPQILDA-EEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRV 349
              +EN D+G +     L + EE+  +   SKS  K                    +SDR 
Sbjct: 1400 DEEENGDRGNEEHTSKLQSTEEDISNTKTSKSKTKTT-----VKQKKKKERRSKKDSDRC 1454

Query: 350  FFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDY--------- 502
             FV+ +GL FEVH RF +EPHI+L++V +K AK VY+K SG I++C ++ Y         
Sbjct: 1455 VFVDVEGLHFEVHFRFVNEPHILLAQVAQKTAKKVYVKNSGKIDQCRMVKYEVTENTVMW 1514

Query: 503  ----------NRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARA 652
                      + D+   AL+ AGVDFG FW+M DDLD+  I +N++  +L TYGVEAARA
Sbjct: 1515 DENQTKQQRQDSDSAYWALKAAGVDFGTFWEMQDDLDVTRIYTNNIRAMLNTYGVEAARA 1574

Query: 653  TIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFETAA 829
            +I+ EVK VF  YG++++ RHL+LIAD+MTHTG  +P SR+G I+ S SPF KMSFETA+
Sbjct: 1575 SILREVKTVFGIYGVEIDFRHLSLIADFMTHTGGYQPMSRHGSISESLSPFLKMSFETAS 1634

Query: 830  KFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            KFIV+AA HG  D+LE+PS+RICLGLPVK+GTG FD++Q++
Sbjct: 1635 KFIVEAAAHGLTDNLETPSSRICLGLPVKMGTGCFDIMQEL 1675


>ref|XP_004299740.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1673

 Score =  282 bits (721), Expect = 2e-73
 Identities = 164/355 (46%), Positives = 208/355 (58%), Gaps = 39/355 (10%)
 Frame = +2

Query: 5    GDANDIE-----AEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXD 169
            GD ++++      ED G+DAQK+K Q TDEM+Y +D  E E +     D           
Sbjct: 1326 GDDDNVDDSGEGVEDFGLDAQKQKRQGTDEMEYDDD-WEDEFNEGRQSDEFENEI----- 1379

Query: 170  DVGNKENDQGTDGEPQILDAEEEPK--------SVPASKSSDKREPGSXXXXXXXXXXXX 325
            D G  + +   DG   I DA ++ +        S P SK    +   S            
Sbjct: 1380 DNGELDVEIDKDGVTGISDANDKMQESCSTGGISKPHSKGKKTK---SRDKIKKKTSAKL 1436

Query: 326  XXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDY- 502
               E DR  FV AKG  FE+H +FT+EPHI+L ++ +K A+NVY+K SGNI  C  ID  
Sbjct: 1437 VRKEYDRATFVSAKGFHFEIHFKFTNEPHILLDQIAQKTARNVYVKSSGNILDCQDIDIY 1496

Query: 503  ------------------------NRDAKLAALQTAGVDFGAFWDMIDDLDINHIVSNDM 610
                                      + K+ ALQTAGVDF   W + DDLD+N+I SN++
Sbjct: 1497 GNEDQVFCCWNDPRNKLSGEKNPSEEEKKMRALQTAGVDFATLWKLQDDLDVNYIYSNNI 1556

Query: 611  HTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIAS 787
            H +L TYGVEAAR TII E+  VF  YGI VNIRHL LIADYMT +G+ RP +R+ GIA 
Sbjct: 1557 HAMLNTYGVEAARETIIKEISNVFKVYGISVNIRHLLLIADYMTRSGSYRPMNRFGGIAE 1616

Query: 788  STSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            STSP +KMSFETA+KFI +AAYHGE DDLE+PSARICLGLPVKVGTG FDL+ ++
Sbjct: 1617 STSPMNKMSFETASKFIQEAAYHGEKDDLETPSARICLGLPVKVGTGCFDLMHKM 1671


>ref|XP_006381018.1| hypothetical protein POPTR_0006s05420g [Populus trichocarpa]
            gi|550335519|gb|ERP58815.1| hypothetical protein
            POPTR_0006s05420g [Populus trichocarpa]
          Length = 1132

 Score =  280 bits (715), Expect = 1e-72
 Identities = 165/358 (46%), Positives = 212/358 (59%), Gaps = 43/358 (12%)
 Frame = +2

Query: 8    DANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDV--GN 181
            D    EA+DLG+D QKRK+Q TDEMDY +DG E   +  E   +          D    +
Sbjct: 774  DEEGEEADDLGLDVQKRKQQVTDEMDY-DDGSEGVLNEDEGDLSGSQAPSGSESDTEPAD 832

Query: 182  KEND-QGTD---------GEPQILDAEEEPKSVPASKSSDKR----------EPGSXXXX 301
            KE++   TD          +P  L    +PKS   +  S  +          E       
Sbjct: 833  KESEISNTDMVDYDSEYFEKPTHLGNYSKPKSRKKTSESSSQVEMHSKLKSTEKKKQKAK 892

Query: 302  XXXXXXXXXXXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIE 481
                       + DR  FVEAKGL FE+HL+FT+EPHI+L+++ +K AK V I+  G ++
Sbjct: 893  GKKVRSKLVKKDFDRSIFVEAKGLHFEIHLKFTNEPHILLAEIAQKTAKKVCIQNPGKVQ 952

Query: 482  RCSVID--------YNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVS 601
            RC V D        Y +D K            + AL T GVDF  FW M D LD+ ++ S
Sbjct: 953  RCQVTDCKENQVIYYGKDPKRRIDIEPGEKQKIPALHTIGVDFNTFWKMQDHLDVRYMYS 1012

Query: 602  NDMHTVLRTYGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-G 778
            N +H +L+ YGVEAAR TII E+K VF++YGI VN RHL+LIADYMTHTG  RP SR  G
Sbjct: 1013 NSIHGMLKAYGVEAARETIIREIKHVFNSYGISVNTRHLSLIADYMTHTGEYRPMSRIGG 1072

Query: 779  IASSTSPFSKMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            I+ S SP SKMSFETA+KFIV+AA HGEVD+LE+PSAR+CLGLPVK+GTGSFDL+Q++
Sbjct: 1073 ISESISPLSKMSFETASKFIVEAALHGEVDNLEAPSARVCLGLPVKMGTGSFDLMQKL 1130


>gb|EYU39881.1| hypothetical protein MIMGU_mgv1a000122mg [Mimulus guttatus]
          Length = 1719

 Score =  278 bits (710), Expect = 4e-72
 Identities = 148/344 (43%), Positives = 211/344 (61%), Gaps = 27/344 (7%)
 Frame = +2

Query: 2    EGDANDIEAEDLGVDAQKRKEQATDEMDY--GEDGMETETSLVENVDAXXXXXXXXXDDV 175
            + D +D + +DLG D QKRK+QATD+MDY  G DG   E    +             D+ 
Sbjct: 1376 DDDDDDDKGDDLGSDVQKRKQQATDDMDYEDGSDGGAAEDDDSDLEKGKSDVENLEEDET 1435

Query: 176  GNKENDQGTDGEPQILDAEEEPKSVP-ASKSSDKREPGSXXXXXXXXXXXXXXXESDRVF 352
            G  E  + TD + +  + + E +++   +KSS     G                   R F
Sbjct: 1436 GKDEESEHTDDKDEASNVQNEDEAISEGTKSSVGSSKGKTSFDKSSVELKGKKIR--RAF 1493

Query: 353  FVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVIDYNRDAKLA--- 523
            ++  KG  FEVH  F +EPH++++++ +K +K VYI++SG + +C ++ Y+ D K     
Sbjct: 1494 YMVVKGTKFEVHFEFHEEPHMLIAQLAQKTSKKVYIRKSGKVSQCKMVSYDPDEKTVIWD 1553

Query: 524  --------------------ALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEA 643
                                A++ +GVDF +FW+M DDLD++ + SN++H +L TYGVEA
Sbjct: 1554 NSKKPKRGESKSEEEDTSYWAVKASGVDFKSFWEMHDDLDLSRLYSNNIHAMLTTYGVEA 1613

Query: 644  ARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFE 820
            ARATII EVK VFD YG+K++ RHL+LIAD+MTHTG+  P SR+G I+ S SPF KMSFE
Sbjct: 1614 ARATIIREVKHVFDIYGVKIDYRHLSLIADHMTHTGSYLPMSRHGSISESLSPFLKMSFE 1673

Query: 821  TAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            TA+KFIV+AA HG  D L++PS+RICLGLPVK+GTGSFD++QQ+
Sbjct: 1674 TASKFIVEAASHGLTDKLDTPSSRICLGLPVKMGTGSFDVMQQL 1717


>ref|XP_006588921.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
            max]
          Length = 1651

 Score =  277 bits (709), Expect = 5e-72
 Identities = 164/345 (47%), Positives = 211/345 (61%), Gaps = 29/345 (8%)
 Frame = +2

Query: 5    GDANDIEA-EDLGVDAQKRKEQATDEMDYGEDGMETET---SLVENV----DAXXXXXXX 160
            G   D E  EDLG DAQKRK Q TDE+DY EDG E ET    L E +    D        
Sbjct: 1323 GGVEDTEGYEDLGSDAQKRKLQGTDEVDY-EDGPEEETHDGELSEEIEGDEDGSDVDANE 1381

Query: 161  XXDDVGNKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXES 340
              ++V +  N +G + +P      +E +++   K   K EP +               + 
Sbjct: 1382 NYNNVTDANNSEGLE-KPSKSKTIDEKQNLKREKK--KSEPTTK--------------KY 1424

Query: 341  DRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCS--------VI 496
            DR  FVEAKG  FE+H RFT EPHI+L+++ ++ AK V I+  G +  C         VI
Sbjct: 1425 DRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTAKKVCIQNFGKVGECKAITCKESGVI 1484

Query: 497  DYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVE 640
             Y +D +            + ALQT+GV F  FW++ DDLD+ +I SN++H +L  YGVE
Sbjct: 1485 YYGKDGRKRIEISASEKEQIPALQTSGVHFKTFWELEDDLDVRYIYSNNVHAMLNAYGVE 1544

Query: 641  AARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSF 817
            AAR TII EV+ VF +YGI VNIRHLTLIAD+MTHTG+ RP +R G IA STSPF KM F
Sbjct: 1545 AARETIIREVQNVFKSYGISVNIRHLTLIADFMTHTGSYRPMNRTGSIADSTSPFIKMCF 1604

Query: 818  ETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            ETA  FIV+AAYHG+VD+LE+PSARICLGLPVK+GTG  DL+Q++
Sbjct: 1605 ETAGNFIVEAAYHGQVDNLETPSARICLGLPVKMGTGCHDLIQKL 1649


>ref|XP_007145632.1| hypothetical protein PHAVU_007G255400g [Phaseolus vulgaris]
            gi|561018822|gb|ESW17626.1| hypothetical protein
            PHAVU_007G255400g [Phaseolus vulgaris]
          Length = 1637

 Score =  271 bits (692), Expect = 5e-70
 Identities = 158/333 (47%), Positives = 208/333 (62%), Gaps = 25/333 (7%)
 Frame = +2

Query: 29   EDLGVDAQKRKEQATDEMDYGEDGMETETS---LVENVDAXXXXXXXXXDDVGNKENDQG 199
            EDLG DAQKRK Q TDE+DY EDG E ET    L E ++          +D  N +++  
Sbjct: 1324 EDLGSDAQKRKRQGTDEVDY-EDGPEEETHDGVLSEEIE----------NDEDNVDDNMT 1372

Query: 200  TDG-EPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXXXXESDRVFFVEAKGLD 376
             D  + + LD   E KS+   K S KRE                  + DR  FV+AKG+ 
Sbjct: 1373 LDASDSEGLDELSESKSI-FEKDSLKREKKKSRPTTR---------KYDRAVFVKAKGMH 1422

Query: 377  FEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVID--------YNRDA------ 514
            F++H +FT EP I+L+++  ++AK V I+ SG +  C  +         Y  D+      
Sbjct: 1423 FQIHFKFTGEPDILLAEIALRSAKKVCIQNSGRVGECKAVTCKESGVMYYGEDSRKRDDI 1482

Query: 515  ------KLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATIINEVKG 676
                  K+ ALQT+GV F  FW++ DDLD+ +I SN++H +L  YGVEAAR TII EV+ 
Sbjct: 1483 PASVKEKIPALQTSGVHFKTFWELQDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQN 1542

Query: 677  VFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYG-IASSTSPFSKMSFETAAKFIVDAAY 853
            VF +YGI VNIRHLTLIAD+MTH+G  RP +R G IA  TSPF KM FETA+KFIV+AAY
Sbjct: 1543 VFKSYGISVNIRHLTLIADFMTHSGGYRPMNRNGSIADCTSPFIKMCFETASKFIVEAAY 1602

Query: 854  HGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            HG+VD+LE+PS+RICLGLPVK+GTG  DL+Q++
Sbjct: 1603 HGQVDNLETPSSRICLGLPVKMGTGCHDLIQKL 1635


>ref|XP_006493898.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Citrus
            sinensis]
          Length = 1715

 Score =  268 bits (686), Expect = 2e-69
 Identities = 157/349 (44%), Positives = 207/349 (59%), Gaps = 34/349 (9%)
 Frame = +2

Query: 8    DANDIEAEDLGVDAQKRKEQATDEMDYGEDGME-------------TETSLVENVDAXXX 148
            DA+  EAEDLG+DA K+K++ATDE DY EDG E             +E    E+      
Sbjct: 1375 DADGEEAEDLGMDAHKQKQRATDEKDY-EDGSEEEMNDGVSAAGFGSEIDQAESEIDDDQ 1433

Query: 149  XXXXXXDDVGNKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXX 328
                  DD    E +   D   + L       S   SKS  KR+                
Sbjct: 1434 AETEIEDDRATNEIETSQDQASENLKPFTPKSSKKKSKSKSKRKKARAKLVKK------- 1486

Query: 329  XXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSV----- 493
              ++DR  +V A+G+ FE H +F +EP+I+L+++    AK VYI+ SG I++C V     
Sbjct: 1487 --DTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKE 1544

Query: 494  ---IDYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRT 628
               I Y +D K            + AL T GVDF AFW + D +D+ +I SN++  +L T
Sbjct: 1545 SQVIYYGKDPKTREDIKPEEKEKVQALHTTGVDFHAFWRLQDFIDVRYIYSNNIQAMLET 1604

Query: 629  YGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFS 805
            YGVEAAR TII E+K VF +YGI VN RHL+LIAD+MTH+G  RP SR  GIA S SPFS
Sbjct: 1605 YGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFS 1664

Query: 806  KMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            KM+FETA+KFIV+AA +G+VD L++PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1665 KMTFETASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKL 1713


>ref|XP_006421454.1| hypothetical protein CICLE_v10004132mg [Citrus clementina]
            gi|557523327|gb|ESR34694.1| hypothetical protein
            CICLE_v10004132mg [Citrus clementina]
          Length = 1715

 Score =  267 bits (682), Expect = 7e-69
 Identities = 156/349 (44%), Positives = 206/349 (59%), Gaps = 34/349 (9%)
 Frame = +2

Query: 8    DANDIEAEDLGVDAQKRKEQATDEMDYGEDGME-------------TETSLVENVDAXXX 148
            DA+  EAEDLG+DA K+K++ATDE DY EDG E             +E    E+      
Sbjct: 1375 DADGEEAEDLGMDAHKQKQRATDEKDY-EDGSEGEMNDGVSAAGFGSEIDQAESEIDDDQ 1433

Query: 149  XXXXXXDDVGNKENDQGTDGEPQILDAEEEPKSVPASKSSDKREPGSXXXXXXXXXXXXX 328
                  DD    E +   D   + L       S   SKS  KR+                
Sbjct: 1434 AETEIEDDRATNEIENSQDQASENLKPFTPKSSKKKSKSKTKRKKARAKLVKK------- 1486

Query: 329  XXESDRVFFVEAKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSV----- 493
              ++DR  +V A+G+ FE H +F +EP+I+L+++    AK VYI+ SG I++C V     
Sbjct: 1487 --DTDRAIYVAARGMHFEAHFKFINEPNILLAQIARHVAKKVYIQSSGKIDQCQVTNCKE 1544

Query: 494  ---IDYNRDAK------------LAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRT 628
               I Y +D K            + AL T GVDF AFW + D +D+ +I SN++  +L T
Sbjct: 1545 SQVIYYGKDPKKREDIKPEEKEKVQALHTTGVDFHAFWQLQDFIDVRYIYSNNIQAMLET 1604

Query: 629  YGVEAARATIINEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRY-GIASSTSPFS 805
            YGVEAAR TII E+K VF +YGI VN RHL+LIAD+MTH+G  RP SR  GIA S SPFS
Sbjct: 1605 YGVEAARETIIREIKHVFGSYGISVNTRHLSLIADFMTHSGGYRPMSRLGGIAESVSPFS 1664

Query: 806  KMSFETAAKFIVDAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            KM+FE A+KFIV+AA +G+VD L++PSARICLGLPVK+GTGSFDL+Q++
Sbjct: 1665 KMTFEIASKFIVEAASYGQVDKLDTPSARICLGLPVKMGTGSFDLMQKL 1713


>ref|XP_003607990.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509045|gb|AES90187.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1628

 Score =  267 bits (682), Expect = 7e-69
 Identities = 148/337 (43%), Positives = 207/337 (61%), Gaps = 21/337 (6%)
 Frame = +2

Query: 5    GDANDIEAEDLGVDAQKRKEQATDEMDYGEDGMETETSLVENVDAXXXXXXXXXDDVGNK 184
            GD  D  AE+ G DAQK K++ATDE+DY +DG E ET   E  +          D+  N 
Sbjct: 1307 GDTED--AEEDGFDAQKSKQRATDEVDY-DDGPEEETHDGEKSEDVEVSEDGKDDEDDNG 1363

Query: 185  ENDQGTDGEPQILDAEEEPKSVPASKSSDKR-EPGSXXXXXXXXXXXXXXXESDRVFFVE 361
                G D + ++ D+++       SKS  ++ EP S               + DR  +V+
Sbjct: 1364 VEVNGDDSDIEVNDSDKNVTLEETSKSKKRKFEPASK--------------KYDRRVYVK 1409

Query: 362  AKGLDFEVHLRFTDEPHIILSKVVEKAAKNVYIKRSGNIERCSVI-------------DY 502
            A G+ FE+H +F  EPHI+L+++ ++ A+ V I+  G + +C  I             D 
Sbjct: 1410 AGGMRFEIHFKFIGEPHILLAQIAQRTAEKVCIQNFGKVGQCKAITCKESGVIYYGEDDS 1469

Query: 503  NRD-------AKLAALQTAGVDFGAFWDMIDDLDINHIVSNDMHTVLRTYGVEAARATII 661
             RD        K+ ALQT+G+ F  FW+M DDL + ++ SND+H +L+ YGVEAA+  II
Sbjct: 1470 KRDDIPSSVKEKIPALQTSGIHFKTFWEMEDDLKVRYVYSNDVHAILKAYGVEAAKEVII 1529

Query: 662  NEVKGVFDAYGIKVNIRHLTLIADYMTHTGAIRPFSRYGIASSTSPFSKMSFETAAKFIV 841
             EV+ VF +YGI VNIRHL LIAD+MTH+G+ RP +R GIA STSPF K+S+ETA+ FIV
Sbjct: 1530 REVQNVFKSYGISVNIRHLMLIADFMTHSGSYRPLTRSGIADSTSPFVKISYETASNFIV 1589

Query: 842  DAAYHGEVDDLESPSARICLGLPVKVGTGSFDLLQQV 952
            +AA HG+VD LE+PS+RICLGLPVK+GTG  DL+Q++
Sbjct: 1590 EAARHGQVDTLETPSSRICLGLPVKMGTGCIDLIQKL 1626