BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00017168
         (1263 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...   281   3e-73
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...   281   3e-73
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...   281   4e-73
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              277   8e-72
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   275   2e-71
ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-...   256   1e-65
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]     253   1e-64
ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-...   250   8e-64
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...   244   7e-62
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   242   3e-61
ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Popu...   237   7e-60
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   237   7e-60
ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-...   235   3e-59
ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-...   234   5e-59
gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus...   233   1e-58
ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [A...   226   2e-56
ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-...   222   3e-55
emb|CAD20831.2| sigma factor [Spinacia oleracea]                      211   7e-52
ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Caps...   207   1e-50
ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Caps...   207   1e-50

>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
            sinensis]
          Length = 605

 Score =  281 bits (720), Expect = 3e-73
 Identities = 176/382 (46%), Positives = 217/382 (56%), Gaps = 10/382 (2%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTASA---- 314
            M+CLLPQF  C PD                  +  K+++P+C R  CVL+TT+ S     
Sbjct: 24   MSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 315  --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 488
              V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 141

Query: 489  XXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKH-VEFSPKTESIHLGTVHYTDAERSLL 665
                                M   ++ A+   K  +  S  T +     +  T+ ER+ +
Sbjct: 142  SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 199

Query: 666  GLQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 839
                +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE      
Sbjct: 200  IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 259

Query: 840  XXXXXXXXXXXXXXXXXXXXXXAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1016
                                   P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 260  RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 319

Query: 1017 QVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 1196
            Q              RCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 320  QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 379

Query: 1197 SIAKNYQGAGMNLQDLVQEGCR 1262
            SIAKNYQGAGMNLQDLVQEGCR
Sbjct: 380  SIAKNYQGAGMNLQDLVQEGCR 401


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
            gi|557539534|gb|ESR50578.1| hypothetical protein
            CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score =  281 bits (720), Expect = 3e-73
 Identities = 175/381 (45%), Positives = 215/381 (56%), Gaps = 9/381 (2%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTASA---- 314
            M+CLLPQF  C PD                  +  K+++P+C R  CVL+TT+ S     
Sbjct: 24   MSCLLPQF-KCQPDTFSIHFRTLHNHQHHSS-HPSKSKEPICFRTHCVLSTTSPSTSTAM 81

Query: 315  --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 488
              V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 82   TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 141

Query: 489  XXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLG 668
                                M   ++ A+   K    S   ++        T+ ER+ + 
Sbjct: 142  SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPA-ISLSADTSTSMWAQLTERERASII 200

Query: 669  LQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 842
               +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE       
Sbjct: 201  GDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRTR 260

Query: 843  XXXXXXXXXXXXXXXXXXXXXAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 1019
                                  P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GIQ
Sbjct: 261  AAEKAAANVMSVKSGSTTRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGIQ 320

Query: 1020 VXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 1199
                          RCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVIS
Sbjct: 321  DLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVIS 380

Query: 1200 IAKNYQGAGMNLQDLVQEGCR 1262
            IAKNYQGAGMNLQDLVQEGCR
Sbjct: 381  IAKNYQGAGMNLQDLVQEGCR 401


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
            gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit 2
            [Theobroma cacao]
          Length = 623

 Score =  281 bits (719), Expect = 4e-73
 Identities = 170/350 (48%), Positives = 216/350 (61%), Gaps = 11/350 (3%)
 Frame = +3

Query: 246  LFKTRQPVCIRAQCVLTTT------TASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSV 407
            L K ++ +C R QCVL+TT      TA+AV+D+EKL+LPS EAH  S+A+DR  +Y+G+ 
Sbjct: 62   LAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIGAT 121

Query: 408  GPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDH 584
            GPP++ ++  T+AT+ L T +E                          M  + + A+ + 
Sbjct: 122  GPPSEASLGATLATDNLLTSDEAVIAAAAAEAVALARAAVKVAKDAALMAENYNYAKTEM 181

Query: 585  KH-VEFSPKTESIHLGTVHYTDAERS-LLGLQPL-QAECRTEEEEIIPVTDSDSLEPTDE 755
            K  V F+  T+S       +T+AER+ ++G  P  ++E   ++ E    T+SD LEPT+E
Sbjct: 182  KSGVSFA--TDSFTSKWALFTEAERAGIIGDSPTDESEMEEDDSEQNSTTESDELEPTNE 239

Query: 756  ELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APIQEVDYA 932
            ELE L+ QL+  IAVRS RQTE                               +Q+VDY+
Sbjct: 240  ELEHLEEQLSRSIAVRSRRQTERKAKRTRAAEKAAANVVSVKSGSTNRKRRGALQDVDYS 299

Query: 933  DPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGV 1112
            DPLRYLRGTTS+SRLLTANEEL+LSEGIQ              RCGG+PT AQWAAAAGV
Sbjct: 300  DPLRYLRGTTSTSRLLTANEELELSEGIQDLLKLERLQEELAERCGGQPTFAQWAAAAGV 359

Query: 1113 DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            DQKTLR RLNYG+ CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 360  DQKTLRSRLNYGVHCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 409


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  277 bits (708), Expect = 8e-72
 Identities = 175/382 (45%), Positives = 211/382 (55%), Gaps = 10/382 (2%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTT------A 308
            M+CLLPQF  CPPD                   L K R+ +  R QC L+TT+       
Sbjct: 1    MSCLLPQF-KCPPDTFSTHPKLHI---------LSKNREAIYFRVQCALSTTSPPLSTST 50

Query: 309  SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXX 485
            +AV+D+EKL+LPSLE+H  S+A  R  +Y+G VGPPT+ N E T+A ETL T EE     
Sbjct: 51   TAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAA 110

Query: 486  XXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAER-SL 662
                                 + G N+ A+ + K   F    ++     + +T+ ER  +
Sbjct: 111  AAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGI 170

Query: 663  LGLQPLQAECRTEEEEIIPVT-DSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 839
            LG          +   +  VT DSD LEPT EELELL+ + +  I VRS RQ E      
Sbjct: 171  LGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRA 230

Query: 840  XXXXXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1016
                                     +QEVDY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 231  RAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGI 290

Query: 1017 QVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 1196
            Q              R G KPT AQWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVI
Sbjct: 291  QDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVI 350

Query: 1197 SIAKNYQGAGMNLQDLVQEGCR 1262
            SIAKNYQGAGMN+QDLVQEGCR
Sbjct: 351  SIAKNYQGAGMNIQDLVQEGCR 372


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  275 bits (704), Expect = 2e-71
 Identities = 174/382 (45%), Positives = 210/382 (54%), Gaps = 10/382 (2%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTT------A 308
            M+CLLPQF  CPPD                     K R+ +  R QC L+TT+       
Sbjct: 1    MSCLLPQF-KCPPDTFSTHPKLHILCKSP------KNREAIYFRVQCALSTTSPPLSTST 53

Query: 309  SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXX 485
            +AV+D+EKL+LPSLE+H  S+A  R  +Y+G VGPPT+ N E T+A ETL T EE     
Sbjct: 54   TAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAVIAA 113

Query: 486  XXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAER-SL 662
                                 + G N+ A+ + K   F    ++     + +T+ ER  +
Sbjct: 114  AAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPASFLSGDDTSQFRRIQFTETERIGI 173

Query: 663  LGLQPLQAECRTEEEEIIPVT-DSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 839
            LG          +   +  VT DSD LEPT EELELL+ + +  I VRS RQ E      
Sbjct: 174  LGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRA 233

Query: 840  XXXXXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1016
                                     +QEVDY+DPLRYLRGTTS+SRLLTA EEL+LSEGI
Sbjct: 234  RAAEKASAGVVSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGI 293

Query: 1017 QVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 1196
            Q              R G KPT AQWAAAAGVDQKTLR+R NYGI CKDKMIKSNIRLVI
Sbjct: 294  QDLLKLEKLQEDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVI 353

Query: 1197 SIAKNYQGAGMNLQDLVQEGCR 1262
            SIAKNYQGAGMN+QDLVQEGCR
Sbjct: 354  SIAKNYQGAGMNIQDLVQEGCR 375


>ref|XP_006484755.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X2 [Citrus
            sinensis]
          Length = 525

 Score =  256 bits (654), Expect = 1e-65
 Identities = 156/322 (48%), Positives = 190/322 (59%), Gaps = 4/322 (1%)
 Frame = +3

Query: 309  SAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 488
            + V+D+EKL+LPSLEAH  ++A +R  +Y G+VGP T+EN+  ++ATETLT +E      
Sbjct: 2    TTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDEAVIAAA 61

Query: 489  XXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKH-VEFSPKTESIHLGTVHYTDAERSLL 665
                                M   ++ A+   K  +  S  T +     +  T+ ER+ +
Sbjct: 62   SAEAVALARAAVKVAKDAALMVNHHNSAKPKSKPAISLSADTNTSMWAQL--TERERASI 119

Query: 666  GLQPLQAECRTEEE--EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXX 839
                +  E   EEE  E  P+  S  LEPT EEL+LL+ Q++  IAVRS RQTE      
Sbjct: 120  IGDSVIVEAAPEEEYSEQQPLNKSADLEPTHEELKLLEEQVSQSIAVRSRRQTERKARRT 179

Query: 840  XXXXXXXXXXXXXXXXXXXXXXAP-IQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGI 1016
                                   P +QEVDY+DPLRYLR TTSSSRLLTANEE+QLS GI
Sbjct: 180  RAAEKAAANVMSVKSGSTSRRKRPSVQEVDYSDPLRYLRATTSSSRLLTANEEMQLSAGI 239

Query: 1017 QVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVI 1196
            Q              RCGG PT AQWAAAAGVDQ+ LR+RLNYGILCKDKMI SNIRLVI
Sbjct: 240  QDLLKLEGLREVLSERCGGSPTFAQWAAAAGVDQRELRRRLNYGILCKDKMITSNIRLVI 299

Query: 1197 SIAKNYQGAGMNLQDLVQEGCR 1262
            SIAKNYQGAGMNLQDLVQEGCR
Sbjct: 300  SIAKNYQGAGMNLQDLVQEGCR 321


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score =  253 bits (646), Expect = 1e-64
 Identities = 173/387 (44%), Positives = 212/387 (54%), Gaps = 15/387 (3%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTASA---- 314
            M+CLLPQF NC PD                  +L K R  +   AQCVL+TT+ S     
Sbjct: 1    MSCLLPQF-NCKPDTFSAQFNFRTHSLPTPNSHLPKARD-INSLAQCVLSTTSPSTSVGA 58

Query: 315  --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXX 485
              V+ +EKL+ PSL+A+  S+  +R  +Y G+ GPP + N E T+ATETL T EE     
Sbjct: 59   TYVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEAVIAA 118

Query: 486  XXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTD---AER 656
                                       DA L    V  S + ESI L +    +   A+ 
Sbjct: 119  AAAEAVTLAKAAVKVA----------KDAAL---LVRPSTRAESISLVSSEARNIKTAQA 165

Query: 657  SLLGLQPLQAECRTEEEEIIPVTD----SDSLEPTDEELELLQVQLTNRIAVRSGRQTEX 824
            +      L+AE    E+   P  D    S+ L+PT+EEL +LQ QL+  IAVRS RQ+E 
Sbjct: 166  ASRVRDSLRAEMALIEDH--PPKDAAKESNDLQPTNEELRILQEQLSKSIAVRSRRQSER 223

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQ 1001
                                        A +Q+VD++DPLRYLR TTS+SRLLTA EE++
Sbjct: 224  KAKRDRAAEKAAANVVAVKSGSNSRKKRASVQDVDHSDPLRYLRSTTSTSRLLTATEEIE 283

Query: 1002 LSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSN 1181
            LSEGIQ              RCGG PT AQWAAAAGVDQKTLR+R+NYGILCKDKMIKSN
Sbjct: 284  LSEGIQDLLKLEKLQEELAERCGGPPTFAQWAAAAGVDQKTLRRRINYGILCKDKMIKSN 343

Query: 1182 IRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            +RLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 344  VRLVISIAKNYQGAGMNLQDLVQEGCR 370


>ref|XP_004303327.1| PREDICTED: RNA polymerase sigma factor sigB-like [Fragaria vesca
            subsp. vesca]
          Length = 616

 Score =  250 bits (639), Expect = 8e-64
 Identities = 152/347 (43%), Positives = 198/347 (57%), Gaps = 10/347 (2%)
 Frame = +3

Query: 252  KTRQPVCIRAQCVL------TTTTASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGP 413
            K R P+   AQ +       T+T  + ++DME+  LPSL  +  SL ++R  +Y G++GP
Sbjct: 68   KARYPISFCAQYMSSSTSHSTSTPTATLLDMEEFSLPSLTVNSDSLIVNRPWTYTGAIGP 127

Query: 414  PTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKH 590
            PT+ N    +ATETL T EE                          +  +N  A++++  
Sbjct: 128  PTEANYGAALATETLLTSEEAVIAAAAAEAVTLAKAALKVAKDVALLVSNNHYAKVENSS 187

Query: 591  VEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEI--IPVTDSDSLEPTDEELE 764
               S  T + H+    + + E +L     + +E    E+    I + +S+++EP +EE E
Sbjct: 188  -PVSCGTSAFHINWAQHLETEPTLRIGDSMASETALVEDHFLQIAINESENVEPANEEFE 246

Query: 765  LLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APIQEVDYADPL 941
            LLQ QL+N IA RS RQTE                             A +Q+VD++DPL
Sbjct: 247  LLQEQLSNGIAARSSRQTERKARRTRAAEKAAASIVSVKSGSTSRKKRASLQDVDHSDPL 306

Query: 942  RYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQK 1121
            RYLR TT +SRLLTANEE++LSEGIQ              RCG +PT AQWAAAAGVDQK
Sbjct: 307  RYLRATTHTSRLLTANEEIELSEGIQELLKLEKLQEDLAQRCGTQPTFAQWAAAAGVDQK 366

Query: 1122 TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            TLRKR+NYGI+CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 367  TLRKRVNYGIMCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 413


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
            gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family protein
            [Populus trichocarpa]
          Length = 567

 Score =  244 bits (622), Expect = 7e-62
 Identities = 160/376 (42%), Positives = 197/376 (52%), Gaps = 4/376 (1%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTAS-AVVD 323
            M+CLLPQF  C PD                      T+ P     QCVL++ + S AV+D
Sbjct: 1    MSCLLPQF-KCQPDTFSVHFRNLQHHGTNH------TQLP-----QCVLSSASPSTAVLD 48

Query: 324  MEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXXXXXXX 503
            +EKL+LPSLE H  S++ +R  +Y+G +GP  K     ++A ETL   +           
Sbjct: 49   LEKLRLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEAVIAAAAAEA 108

Query: 504  XXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQ 683
                               N         +  +  T+S        T+ ER+ +    + 
Sbjct: 109  VALARAAVKVAKDAAEMAKNYSFMKKETKIPIASTTDSFSSMWSLLTEKERADIIGDSVS 168

Query: 684  AECRTEEEEII--PVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXX 857
            AE R  EE  +  P  + D LEPT EEL LLQ QL+  IAVRS RQTE            
Sbjct: 169  AETRLREEYSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKA 228

Query: 858  XXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXX 1034
                              P+QEVD +DPLR+ RG +SSSRLL+A EE++LSEGIQ     
Sbjct: 229  AANVVSVKSGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKL 288

Query: 1035 XXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNY 1214
                     R GG+P+ AQWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNY
Sbjct: 289  ERIEEELKERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNY 348

Query: 1215 QGAGMNLQDLVQEGCR 1262
            QG GMNLQDLVQEGCR
Sbjct: 349  QGTGMNLQDLVQEGCR 364


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  242 bits (617), Expect = 3e-61
 Identities = 155/387 (40%), Positives = 207/387 (53%), Gaps = 15/387 (3%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXY------LFKTRQPVCIRAQCVL----- 293
            M+CLLPQF  C P+                           K R P  +R QC+L     
Sbjct: 1    MSCLLPQF-KCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASP 59

Query: 294  -TTTTASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEE 470
             T+T  +  +D+++L+LP  + +  S++++R  SY+G+V        E ++A+  LT EE
Sbjct: 60   PTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAV--------ESSLASTLLTSEE 111

Query: 471  XXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDA 650
                                      +  + + +R   K  + SPK +++H     + ++
Sbjct: 112  ASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKS-QSSPKPDALHFKWAQFMES 170

Query: 651  ERSLLGLQPLQAECRTEEEEIIP--VTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEX 824
            ER+ +  +P+    R  E + +    T+SD +EPT EELELLQ +L+  I V+S RQTE 
Sbjct: 171  ERADIIGEPVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDELSESITVKSKRQTER 230

Query: 825  XXXXXXXXXXXXXXXXXXXXXXXXXXXA-PIQEVDYADPLRYLRGTTSSSRLLTANEELQ 1001
                                          +QEVDY+DPLRYLR TT++SRLLTA EEL+
Sbjct: 231  KARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELE 290

Query: 1002 LSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSN 1181
            LSEGIQ              R G +PT AQWAAAAGV+Q+TLRKRLNYG LCKDKMIKSN
Sbjct: 291  LSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSN 350

Query: 1182 IRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            IRLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 351  IRLVISIAKNYQGAGMNLQDLVQEGCR 377


>ref|XP_002325455.2| hypothetical protein POPTR_0019s06100g [Populus trichocarpa]
            gi|550316911|gb|EEE99836.2| hypothetical protein
            POPTR_0019s06100g [Populus trichocarpa]
          Length = 555

 Score =  237 bits (605), Expect = 7e-60
 Identities = 151/348 (43%), Positives = 194/348 (55%), Gaps = 11/348 (3%)
 Frame = +3

Query: 252  KTRQPVCIRAQCVLTT---TTASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTK 422
            K  +P C RAQC L++   +T++AV+++EKL+LPSLE+H  S+A +R  +Y+G +GPP +
Sbjct: 10   KNGEPFCFRAQCALSSASPSTSTAVLNLEKLRLPSLESHSDSIAANRPWTYIGGIGPPKE 69

Query: 423  ENIEDTVATETLT-GEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEF 599
                 ++ATETL   +E                          M  +      + K +  
Sbjct: 70   PLFGTSLATETLIINDEAVIAAAAAEAVALARAAVKVAKDAAEMAKNYCSVNTETK-IPI 128

Query: 600  SPKTESIHLGTVHYTDAERS-LLGLQ-----PLQAECRTEEEEIIPVTDSDSLEPTDEEL 761
            +   +S        T  ER+ ++G+       L+ EC T+     P  +SD   PT EEL
Sbjct: 129  ASTADSFSSMWCLLTGKERADIIGVSFSAETGLREECSTQ----YPTEESDCFGPTHEEL 184

Query: 762  ELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APIQEVDYADP 938
             LL+ QL+  I VRS RQT+                              P+QEVD +DP
Sbjct: 185  ALLEKQLSESIVVRSKRQTQRKAKRARAAEKAAANFVFMKSGSACKKKRVPVQEVDQSDP 244

Query: 939  LRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQ 1118
            LR+ RG ++SSRLL+A EE++LSEGIQ              R GGKPT AQWAAAA VDQ
Sbjct: 245  LRFFRGASTSSRLLSATEEVELSEGIQDLLKLERIEEELKERFGGKPTFAQWAAAARVDQ 304

Query: 1119 KTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
             TLRKRLNY ILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 305  ITLRKRLNYAILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 352


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  237 bits (605), Expect = 7e-60
 Identities = 164/379 (43%), Positives = 203/379 (53%), Gaps = 7/379 (1%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTT---TASAV 317
            M+CLLPQF  C PD                     K+R+P+  RAQC+L+TT   T++AV
Sbjct: 2    MSCLLPQF-KCQPDTFSIHFRANYFHFSNVTQST-KSREPIYYRAQCILSTTSPSTSTAV 59

Query: 318  VDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXX 494
            +D+EKL+LPS EA   S+A +   +Y              T+ATETL T +E        
Sbjct: 60   LDLEKLRLPSFEAPSDSIAPNSPWTYA---------TFGSTLATETLITSDEAVIAAAAA 110

Query: 495  XXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERSLLGLQ 674
                              +  +   A  + K    SP T         +T+ ER+ +   
Sbjct: 111  EAVALARAAVKVAKDAALLVKNFPSAETESKLT--SPSTIDASRWP-QFTETERARIIGD 167

Query: 675  PLQAECRTEEEEIIP--VTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXX 848
             +  E    EE  +   + +SD LE T +ELELLQ QL+  IAVRS RQTE         
Sbjct: 168  SVATETGPREESSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAV 227

Query: 849  XXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVX 1025
                                  +QEVDY+DPLRYLRGTTS+SRLLTA+EEL+LS  IQ  
Sbjct: 228  EKAASSVVSVKPGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDL 287

Query: 1026 XXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 1205
                        R GG+PT AQWAAAAGVDQ+TLRKR+N+G +CKDKMIKSNIRLVISIA
Sbjct: 288  LKLERLQEELAERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIA 347

Query: 1206 KNYQGAGMNLQDLVQEGCR 1262
            KNYQGAGMNLQDLVQEGCR
Sbjct: 348  KNYQGAGMNLQDLVQEGCR 366


>ref|XP_004229543.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum
            lycopersicum]
          Length = 613

 Score =  235 bits (600), Expect = 3e-59
 Identities = 167/419 (39%), Positives = 204/419 (48%), Gaps = 47/419 (11%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTA------ 308
            M+ LLPQF + P                     L K+R  + +R QC+L+TT+A      
Sbjct: 1    MSYLLPQFLSLPD-----AFVICAKTQQQTTIQLSKSRDSIHLRTQCILSTTSAVTSTAT 55

Query: 309  SAVVDMEKLQLPSLE----------------------------------AHLRSLAMDRS 386
            S V+ +EKLQLPS+E                                  A+  S+A DR 
Sbjct: 56   STVLGIEKLQLPSIEILSNSVAAERSWKSPSAATTTVPGIQKLKLPSFEANPDSVAPDRP 115

Query: 387  MSYVGSVGPPTKENIEDTVATETLTGEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNS 566
             +Y G+VGPP + N   T   ++L  EE                          + G N+
Sbjct: 116  WTYTGAVGPPAEAN---TKPEDSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNN 172

Query: 567  DARLDH------KHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIPVTD 728
                D+           +P  ES+HL     T        L   + +          +TD
Sbjct: 173  LKDSDNVGRGTLSEARTAP-FESVHLAQPGETRGVGVCAELNGSEMKWTGSSLFRDTLTD 231

Query: 729  SDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 905
            SD LEP+ EELE+LQ QL+N IAV+S RQTE                             
Sbjct: 232  SDDLEPSHEELEILQSQLSNVIAVKSNRQTERKARRAKAVERAAANVVSVKSGSTSRKKR 291

Query: 906  APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTL 1085
            A +Q+VDY+DPLRYLRGTT SSRLLTA+EE +LS GIQ              RCGG+PT 
Sbjct: 292  ASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTF 351

Query: 1086 AQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
             QWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 352  TQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410


>ref|XP_006359117.1| PREDICTED: RNA polymerase sigma factor sigB-like [Solanum tuberosum]
          Length = 613

 Score =  234 bits (598), Expect = 5e-59
 Identities = 165/419 (39%), Positives = 202/419 (48%), Gaps = 47/419 (11%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTA------ 308
            M+ LLPQF + P                     L K+R  + +R QC+L+TT+A      
Sbjct: 1    MSYLLPQFLSLPD-----AFVICAKTQQQTTIQLSKSRDHIHLRTQCILSTTSAVTSTAT 55

Query: 309  ----------------------------------SAVVDMEKLQLPSLEAHLRSLAMDRS 386
                                              + V D++KL+LPS EA+  S+A DR 
Sbjct: 56   STVLGIEKLQLPSIEILSNSVAAERSWKSPSAATTTVPDIQKLKLPSFEANPDSVAPDRP 115

Query: 387  MSYVGSVGPPTKENIEDTVATETLTGEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNS 566
             +Y G+VGPP + N   T    +L  EE                          + G N+
Sbjct: 116  WTYTGAVGPPAEAN---TKPENSLASEEAIVAAAAAEAVALAKAALKGAQDAVMLVGYNN 172

Query: 567  DARLDH------KHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIPVTD 728
                D+           +P  ES+HL     T        L   + +          +TD
Sbjct: 173  LNDSDNVGRGTLSEARTAP-FESVHLAQPGETRRVGVCAELNGSEMKWTGSSLFRETLTD 231

Query: 729  SDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX- 905
            SD LEP+ EELE+LQ QL+N IAV+S RQTE                             
Sbjct: 232  SDDLEPSPEELEILQSQLSNVIAVKSNRQTERKAKRAKSVEKAAANVVTVKSGSTSRKKR 291

Query: 906  APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTL 1085
            A +Q+VDY+DPLRYLRGTT SSRLLTA+EE +LS GIQ              RCGG+PT 
Sbjct: 292  ASVQDVDYSDPLRYLRGTTCSSRLLTASEEQELSRGIQDLLKLERLQVELTERCGGQPTF 351

Query: 1086 AQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
             QWAAAAGVDQ TLRKRLNYGILCKDKMIKSN+RLVISIAKNYQG GMNLQDLVQEGCR
Sbjct: 352  TQWAAAAGVDQMTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGVGMNLQDLVQEGCR 410


>gb|EYU27177.1| hypothetical protein MIMGU_mgv1a003367mg [Mimulus guttatus]
          Length = 589

 Score =  233 bits (594), Expect = 1e-58
 Identities = 164/407 (40%), Positives = 208/407 (51%), Gaps = 35/407 (8%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTT------- 305
            M+CLLPQF  C PD                  +  K+R+ +  R QCVL+TT+       
Sbjct: 1    MSCLLPQF-KCSPDTFAVNFKSQTLFTV----HSSKSRESINFRTQCVLSTTSPPPTMAA 55

Query: 306  ASAVVDMEKLQLPSLEAHLRSLAMDRS--------------------------MSYVGSV 407
             + +++ EKLQL  LE    SL  DRS                          ++YVGSV
Sbjct: 56   TTTLLEFEKLQLSPLETIPNSLPADRSWTTPRAKTSLLDLDKLTSLPVASNKTLTYVGSV 115

Query: 408  GPPTKENIEDTVATETL-TGEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDH 584
            GPP++ N+   +  E L T +E                                 A +  
Sbjct: 116  GPPSEINLGANLDKEALITSDEAVITAAASEALALAKAAVKVA---------KDAAMMVS 166

Query: 585  KHVEFSPKTESIHLGTVHYTDAERSLLGLQPLQAECRTEEEEIIPVTDSD-SLEPTDEEL 761
             H    P T+S       + + + S   +   +AE  + E +   + +SD S EP+ EEL
Sbjct: 167  LHRSTKPDTKS-------FLEVDTSAERVVVREAEIGSGENDDHVLGESDDSEEPSAEEL 219

Query: 762  ELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPIQEVDYADPL 941
            ELL +QL++ IAVRS RQ E                            +P+QEVDY+DPL
Sbjct: 220  ELLDLQLSSSIAVRSKRQIERKVRRGRAAEKAAANVVSVKSGSSKKKRSPVQEVDYSDPL 279

Query: 942  RYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQK 1121
            RYLR TTSS+RLLTA+EE  LSEGIQV             R GG+P+ +QWAAAAGVDQK
Sbjct: 280  RYLRATTSSTRLLTASEEQVLSEGIQVLLKLERLQVELIERFGGEPSYSQWAAAAGVDQK 339

Query: 1122 TLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            TLR+++NYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Sbjct: 340  TLREQINYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 386


>ref|XP_006878613.1| hypothetical protein AMTR_s00011p00258380 [Amborella trichopoda]
            gi|548831956|gb|ERM94758.1| hypothetical protein
            AMTR_s00011p00258380 [Amborella trichopoda]
          Length = 570

 Score =  226 bits (575), Expect = 2e-56
 Identities = 141/350 (40%), Positives = 194/350 (55%), Gaps = 11/350 (3%)
 Frame = +3

Query: 246  LFKTRQPVCIRAQCVLTTTTASAVVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKE 425
            L +TR+  C + QCV  ++TA+ VVD++K+++PSL  H  S++    ++YVG++G   K 
Sbjct: 25   LVRTREATCFQTQCV--SSTATVVVDVDKVRVPSLGGHSTSVSTHGPLTYVGTIGSQKKT 82

Query: 426  NIEDTVATETLT-GEEXXXXXXXXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFS 602
            + E  + TE+L   EE                          M G    +R D K  +F 
Sbjct: 83   DFEAALVTESLLKSEEAIIAAAAAEAIALAKAAAKLAKDAALMVGSVPPSRSD-KVDDFP 141

Query: 603  PKTESIHLGTVHYTDAER-------SLLGLQPLQAECRTEEEEIIPVTDSDSLEPTDEE- 758
             + + + L     T+ ER       S+ G+ P     R + + +  ++ ++  +    E 
Sbjct: 142  SEADILRLQRARLTEMERIGSMDGSSIAGIGP-----RDKHKSVNQLSPNEMADKQSREN 196

Query: 759  -LELLQVQLTNRIAVRSGRQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXX-APIQEVDYA 932
             LE LQ+Q + R+AVRS RQTE                             AP+QE+DY+
Sbjct: 197  ILEALQLQHSQRVAVRSRRQTERRARRAKGVEKAAANAITVKLGTTSRRKRAPLQEIDYS 256

Query: 933  DPLRYLRGTTSSSRLLTANEELQLSEGIQVXXXXXXXXXXXXXRCGGKPTLAQWAAAAGV 1112
            DPLRYLRGTT+S++LLTA EEL+LSEGIQ              R GG+PT  QWAAAAG+
Sbjct: 257  DPLRYLRGTTNSTKLLTATEELELSEGIQDLLKLEKLHKELTERFGGEPTFVQWAAAAGI 316

Query: 1113 DQKTLRKRLNYGILCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR 1262
            DQK LR+RL+YG  CKDKMIKSNIRLVISIAKNYQG G+++QDLVQEGCR
Sbjct: 317  DQKALRRRLSYGTHCKDKMIKSNIRLVISIAKNYQGVGLSIQDLVQEGCR 366


>ref|XP_006577887.1| PREDICTED: RNA polymerase sigma factor sigB-like [Glycine max]
          Length = 564

 Score =  222 bits (565), Expect = 3e-55
 Identities = 154/379 (40%), Positives = 194/379 (51%), Gaps = 7/379 (1%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTASAVVDM 326
            M+CLLP F NC  D                  +L KTR  +C + QCVL+ T+ S ++ +
Sbjct: 1    MSCLLPHF-NCHLDTFRTHPYALPT-------HLSKTRPNLCFQPQCVLSATSPSTLLSL 52

Query: 327  EK---LQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXX 494
            EK   L  PS          + S  Y+ +V PP + N + T++ E+L T EE        
Sbjct: 53   EKKLALDAPS--------DPNTSWPYIAAVSPPLQANFKSTLSAESLLTNEEAVIVAAAS 104

Query: 495  XXXXXXXXXXXXXXXXXFMGGDNSDARLDHK-HVEFSPKTESIHLGTVHYTDAERSLLGL 671
                              +      A  ++K HV  S K++ + L      +     +  
Sbjct: 105  EALALAKAAAKVAKDAALLVKKKPPAEAEYKSHV--SSKSDDLLLKWFKQMEEVEDGVAE 162

Query: 672  QPLQAECRTEEE-EIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXX 848
            + + A     E  ++ P  +   LEP+ EELE LQ QL++ IAVRS RQTE         
Sbjct: 163  ESMGAGAEIMEGVDVSPSEEESDLEPSHEELERLQEQLSDSIAVRSRRQTERKAKRVRAT 222

Query: 849  XXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVX 1025
                                  +QEVDY+DPLRYLR TTS+SRLLT  EE++LS GIQ  
Sbjct: 223  EKATTNFTSFKPGSSSRRKRVSMQEVDYSDPLRYLRTTTSASRLLTPTEEIKLSAGIQDL 282

Query: 1026 XXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 1205
                        R G +PT AQWAA AGVDQKTLRKRLNYGI CKDKMIKSNIRLVISIA
Sbjct: 283  LKLEKIQEDLAERFGSQPTFAQWAAVAGVDQKTLRKRLNYGIFCKDKMIKSNIRLVISIA 342

Query: 1206 KNYQGAGMNLQDLVQEGCR 1262
            KNYQG+GMNLQDLVQEGCR
Sbjct: 343  KNYQGSGMNLQDLVQEGCR 361


>emb|CAD20831.2| sigma factor [Spinacia oleracea]
          Length = 575

 Score =  211 bits (536), Expect = 7e-52
 Identities = 140/381 (36%), Positives = 189/381 (49%), Gaps = 9/381 (2%)
 Frame = +3

Query: 147  MACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTT---TASA- 314
            M CLLPQF  C PD                   L + R  VC R QC ++T    TA+A 
Sbjct: 1    MTCLLPQF-KCQPDTFSISSVLHPPSASSSATSLLRNRDLVCFRPQCAVSTPPPPTAAAE 59

Query: 315  --VVDMEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETLTGEEXXXXXX 488
              + D+EKL+LP +E++  SL+     +++ ++G P +   +  +  + L   E      
Sbjct: 60   TSIFDVEKLRLPYVESNSNSLSAFAQSTFLSTLGSPAEVKFDTALTAKLLIENEEAVIAA 119

Query: 489  XXXXXXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAER--SL 662
                                +   NS        +E     +S+H       + E+  S+
Sbjct: 120  AAAEAVALARAAAKLAKDAALMAFNSQPTKPVSKLE----GQSLHFSGAQLLENEQVGSM 175

Query: 663  LGLQPLQAECRTEEEEIIPVTDSDSLEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXX 842
               +  +   R  +     V++   +EPT EEL+LL+V+L   I VRS RQ E       
Sbjct: 176  RNFEGSENSLREGDT----VSEPADMEPTIEELQLLEVELDESITVRSTRQGERKARRAR 231

Query: 843  XXXXXXXXXXXXXXXXXXXXX-APIQEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQ 1019
                                    +QEVDY+DPLRYLRG T+SSRLLT++EE +LS GIQ
Sbjct: 232  AAEKVASNVVSVKVGSNSRKKRTSVQEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQ 291

Query: 1020 VXXXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVIS 1199
                          R G  P+  QWAAAAG+DQ+TLR+RLN+G  CKDKMIKSN+RLVIS
Sbjct: 292  DLLKLEKLHDELKVRFGKSPSFVQWAAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVIS 351

Query: 1200 IAKNYQGAGMNLQDLVQEGCR 1262
            IAKNYQG+GMNLQDLVQEGCR
Sbjct: 352  IAKNYQGSGMNLQDLVQEGCR 372


>ref|XP_006307126.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575837|gb|EOA40024.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 571

 Score =  207 bits (526), Expect = 1e-50
 Identities = 144/379 (37%), Positives = 190/379 (50%), Gaps = 8/379 (2%)
 Frame = +3

Query: 150  ACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTA--SAVVD 323
            +CLLPQF  C PD                     + + PV  + QC +TT+ A  ++ +D
Sbjct: 3    SCLLPQF-KCQPDSFSIHFRTSFSVSK-------QNKGPVFFQPQCAVTTSPALLTSTLD 54

Query: 324  MEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXXXX 500
            + KL+LPS +    S   DR  +Y G+VGP T+    + +A+ETL T +E          
Sbjct: 55   VAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEA 114

Query: 501  XXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERS-LLGLQP 677
                                N+   L     +   K +        +T+ ER+ +LG   
Sbjct: 115  VALARAAVKVAKDATLFKNSNNTNLLISSTADKRSKWDQ-------FTEKERAGILGHLA 167

Query: 678  LQAECRTEEEEIIPVTDSDS---LEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXX 848
            +       ++   P ++ +S   L    +E+EL++ Q    +AVRS RQTE         
Sbjct: 168  VSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRSTRQTERKARRAKGL 227

Query: 849  XXXXXXXXXXXXXXXXXXXAPI-QEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVX 1025
                                 + QEVD+ DPLRYLR TTSSS+LLT  EE +LS GIQ  
Sbjct: 228  EKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDL 287

Query: 1026 XXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 1205
                        RCG +PT +QWA+AAGVDQK+LRKR+NYG  CKDKMIKSNIRLVISIA
Sbjct: 288  LKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIA 347

Query: 1206 KNYQGAGMNLQDLVQEGCR 1262
            KNYQGAGMNLQDLVQEGCR
Sbjct: 348  KNYQGAGMNLQDLVQEGCR 366


>ref|XP_006307125.1| hypothetical protein CARUB_v10008711mg [Capsella rubella]
            gi|482575836|gb|EOA40023.1| hypothetical protein
            CARUB_v10008711mg [Capsella rubella]
          Length = 487

 Score =  207 bits (526), Expect = 1e-50
 Identities = 144/379 (37%), Positives = 190/379 (50%), Gaps = 8/379 (2%)
 Frame = +3

Query: 150  ACLLPQFFNCPPDXXXXXXXXXXXXXXXXXXYLFKTRQPVCIRAQCVLTTTTA--SAVVD 323
            +CLLPQF  C PD                     + + PV  + QC +TT+ A  ++ +D
Sbjct: 3    SCLLPQF-KCQPDSFSIHFRTSFSVSK-------QNKGPVFFQPQCAVTTSPALLTSTLD 54

Query: 324  MEKLQLPSLEAHLRSLAMDRSMSYVGSVGPPTKENIEDTVATETL-TGEEXXXXXXXXXX 500
            + KL+LPS +    S   DR  +Y G+VGP T+    + +A+ETL T +E          
Sbjct: 55   VAKLRLPSFDTDSDSRISDRQWTYTGTVGPSTEAKYLEALASETLLTSDEAVVAAAAAEA 114

Query: 501  XXXXXXXXXXXXXXXFMGGDNSDARLDHKHVEFSPKTESIHLGTVHYTDAERS-LLGLQP 677
                                N+   L     +   K +        +T+ ER+ +LG   
Sbjct: 115  VALARAAVKVAKDATLFKNSNNTNLLISSTADKRSKWDQ-------FTEKERAGILGHLA 167

Query: 678  LQAECRTEEEEIIPVTDSDS---LEPTDEELELLQVQLTNRIAVRSGRQTEXXXXXXXXX 848
            +       ++   P ++ +S   L    +E+EL++ Q    +AVRS RQTE         
Sbjct: 168  VSDTGIVSDKSTAPASNKESSADLISEIQEVELVEEQPAASLAVRSTRQTERKARRAKGL 227

Query: 849  XXXXXXXXXXXXXXXXXXXAPI-QEVDYADPLRYLRGTTSSSRLLTANEELQLSEGIQVX 1025
                                 + QEVD+ DPLRYLR TTSSS+LLT  EE +LS GIQ  
Sbjct: 228  EKSASAIPSVKTGSSPRKKRVVAQEVDHNDPLRYLRVTTSSSKLLTVREEHELSAGIQDL 287

Query: 1026 XXXXXXXXXXXXRCGGKPTLAQWAAAAGVDQKTLRKRLNYGILCKDKMIKSNIRLVISIA 1205
                        RCG +PT +QWA+AAGVDQK+LRKR+NYG  CKDKMIKSNIRLVISIA
Sbjct: 288  LKLERLQAELTERCGRQPTFSQWASAAGVDQKSLRKRINYGTQCKDKMIKSNIRLVISIA 347

Query: 1206 KNYQGAGMNLQDLVQEGCR 1262
            KNYQGAGMNLQDLVQEGCR
Sbjct: 348  KNYQGAGMNLQDLVQEGCR 366