BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00016618
         (519 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   120   3e-46
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              120   3e-46
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]     114   1e-43
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr...   104   7e-41
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A...   107   9e-41
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,...   103   2e-40
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr...   101   3e-40
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165...   100   7e-40
ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arab...    99   2e-39
ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,...   107   2e-39
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps...    98   3e-39
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,...   104   1e-38
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu...   102   3e-38
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...    92   1e-37
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu...   102   3e-36
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas...    93   1e-35
ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas...    93   1e-35
ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phas...    93   1e-35
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...    89   5e-35
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca...    90   5e-35

>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  120 bits (302), Expect(2) = 3e-46
 Identities = 65/124 (52%), Positives = 84/124 (67%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GS+CEMVAKIA+  T L+ +L R PTY+EIA+   ++VS +RL S  +RTPIS+DQ   T
Sbjct: 268 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQA-VT 326

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+TL+EIIPGPDET P+ MV+RQ MKQ               ++L L+FG NGETP 
Sbjct: 327 SQGCMTLQEIIPGPDETTPQKMVKRQLMKQE-VERALNTLCEREAYILRLYFGINGETPL 385

Query: 13  SCDE 2
           S +E
Sbjct: 386 SFEE 389



 Score = 90.5 bits (223), Expect(2) = 3e-46
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI  KSR IRLPG
Sbjct: 220 QEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLPG 268


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  120 bits (302), Expect(2) = 3e-46
 Identities = 65/124 (52%), Positives = 84/124 (67%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GS+CEMVAKIA+  T L+ +L R PTY+EIA+   ++VS +RL S  +RTPIS+DQ   T
Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQA-VT 219

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+TL+EIIPGPDET P+ MV+RQ MKQ               ++L L+FG NGETP 
Sbjct: 220 SQGCMTLQEIIPGPDETTPQKMVKRQLMKQE-VERALNTLCEREAYILRLYFGINGETPL 278

Query: 13  SCDE 2
           S +E
Sbjct: 279 SFEE 282



 Score = 90.5 bits (223), Expect(2) = 3e-46
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI  KSR IRLPG
Sbjct: 113 QEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLPG 161


>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 422

 Score =  114 bits (286), Expect(2) = 1e-43
 Identities = 60/124 (48%), Positives = 77/124 (62%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           G+MC +VAK+ + N  L  +L R+PTY+EIA   G+ VS +RL S   R PISLD+   T
Sbjct: 261 GNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRA-IT 319

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+TL+EIIPGP+E  PE MVR+Q MKQ                VL LHFG +G+ P 
Sbjct: 320 ERGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPL 379

Query: 13  SCDE 2
           SC+E
Sbjct: 380 SCEE 383



 Score = 87.8 bits (216), Expect(2) = 1e-43
 Identities = 39/49 (79%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGS+GLLRGA++FDP +G KLSTYVYWWI+QAIIRAIE KSR +RLPG
Sbjct: 213 QEGSVGLLRGAQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLPG 261


>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
           gi|557541154|gb|ESR52198.1| hypothetical protein
           CICLE_v10033747mg [Citrus clementina]
          Length = 436

 Score =  104 bits (259), Expect(2) = 7e-41
 Identities = 62/124 (50%), Positives = 76/124 (61%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM  MVAKIA+ N  L+ +L R PT  EIA+   I VS +RLA    R PISLD    T
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGA-IT 336

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+TL++IIPGPDET PE MV++Q MKQ              + +L LHFG +G+TP 
Sbjct: 337 DTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREAD-ILRLHFGLDGQTPV 395

Query: 13  SCDE 2
           SC E
Sbjct: 396 SCKE 399



 Score = 89.0 bits (219), Expect(2) = 7e-41
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGA+RF+P +G+KLSTYVYWWIKQAIIR I  KSRTIRLPG
Sbjct: 230 QEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLPG 278


>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
           gi|548854777|gb|ERN12687.1| hypothetical protein
           AMTR_s00025p00248060 [Amborella trichopoda]
          Length = 449

 Score =  107 bits (267), Expect(2) = 9e-41
 Identities = 60/124 (48%), Positives = 80/124 (64%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSMC  VAK+++ +  L S+LGR P+ EEIA+  GI +S +RL +   R P+S+DQ P  
Sbjct: 289 GSMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIALSRVRLVTERCRLPLSIDQ-PLG 347

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
            HG ++LK+II GP+ETRPE MV+R+ MK               E ++ L FG NGETPK
Sbjct: 348 RHGDISLKDIIAGPEETRPEEMVKREWMK-GTMEMLLQTLSEREECIVRLQFGMNGETPK 406

Query: 13  SCDE 2
           SCDE
Sbjct: 407 SCDE 410



 Score = 85.5 bits (210), Expect(2) = 9e-41
 Identities = 39/49 (79%), Positives = 44/49 (89%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGS+GLLRGAERFD  +G+KLSTYVYWWIKQAII+AI  KSR +RLPG
Sbjct: 241 QEGSLGLLRGAERFDHRRGYKLSTYVYWWIKQAIIKAIATKSRIVRLPG 289


>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Citrus sinensis]
          Length = 436

 Score =  103 bits (256), Expect(2) = 2e-40
 Identities = 62/124 (50%), Positives = 76/124 (61%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM  MVAKIA+ N  L+ +L R PT  EIA+   I VS +RLA    R PISLD    T
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGA-IT 336

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+TL++IIPGPDET PE MV++Q MKQ              + +L LHFG +G+TP 
Sbjct: 337 DTGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREAD-ILRLHFGLDGQTPV 395

Query: 13  SCDE 2
           SC E
Sbjct: 396 SCKE 399



 Score = 89.0 bits (219), Expect(2) = 2e-40
 Identities = 41/49 (83%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGA+RF+P +G+KLSTYVYWWIKQAIIR I  KSRTIRLPG
Sbjct: 230 QEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLPG 278


>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
           gi|557100961|gb|ESQ41324.1| hypothetical protein
           EUTSA_v10013654mg [Eutrema salsugineum]
          Length = 421

 Score =  101 bits (252), Expect(2) = 3e-40
 Identities = 59/124 (47%), Positives = 78/124 (62%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM E+ AK+A+ +  LT KL R P+ EEIA+   I VS +RLA    R+P+SLD+   +
Sbjct: 260 GSMWELTAKVAEASNVLTRKLKRIPSCEEIAEHLNIHVSAVRLAVERGRSPVSLDRV-AS 318

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
           L+G +TL+EI+ GPDETRPE MV+R+ MK                 VL L+FG NGETP 
Sbjct: 319 LNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESR-VLGLYFGLNGETPM 377

Query: 13  SCDE 2
           S +E
Sbjct: 378 SFEE 381



 Score = 89.4 bits (220), Expect(2) = 3e-40
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI  KSR ++LPG
Sbjct: 212 QEGSIGLLRGAERFDPERGYKLSTYVYWWIKQAILRAIAHKSRLVKLPG 260


>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
           gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
           polymerase sigma factor sigD, chloroplastic; Short=Sigma
           factor D; Short=Sigma-D; AltName: Full=RNA polymerase
           sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
           Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
           factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
           RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
           gi|9758039|dbj|BAB08700.1| sigma-like factor
           [Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
           factor 4 [Arabidopsis thaliana]
          Length = 419

 Score =  100 bits (248), Expect(2) = 7e-40
 Identities = 57/124 (45%), Positives = 79/124 (63%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM E+ AK+A+ +  LT KL R P+ EEIA+   ++VS +RLA   +R+P+SLD+   +
Sbjct: 258 GSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRV-AS 316

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
            +G +TL+EI+ GPDETRPE MV+R+ MK                 VL L+FG NGETP 
Sbjct: 317 QNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESR-VLGLYFGLNGETPM 375

Query: 13  SCDE 2
           S +E
Sbjct: 376 SFEE 379



 Score = 89.7 bits (221), Expect(2) = 7e-40
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI  KSR ++LPG
Sbjct: 210 QEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSRLVKLPG 258


>ref|XP_002873625.1| hypothetical protein ARALYDRAFT_909325 [Arabidopsis lyrata subsp.
           lyrata] gi|297319462|gb|EFH49884.1| hypothetical protein
           ARALYDRAFT_909325 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score = 99.0 bits (245), Expect(2) = 2e-39
 Identities = 57/124 (45%), Positives = 78/124 (62%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM E+ AK+A+ +  LT KL R P+ EEIA+   + VS +RLA   +R+P+SLD+   +
Sbjct: 112 GSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLHVSAVRLAVERSRSPVSLDRV-VS 170

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
            +G +TL+EI+ GPDETRPE MV+R+ MK                 VL L+FG NGETP 
Sbjct: 171 QNGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESR-VLGLYFGLNGETPM 229

Query: 13  SCDE 2
           S +E
Sbjct: 230 SFEE 233



 Score = 89.7 bits (221), Expect(2) = 2e-39
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI  KSR ++LPG
Sbjct: 64  QEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSRLVKLPG 112


>ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Solanum lycopersicum]
          Length = 442

 Score =  107 bits (266), Expect(2) = 2e-39
 Identities = 57/124 (45%), Positives = 77/124 (62%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GS+ E+V KI   NT L+ KL R P+Y+EIA+  G+DVS +RL    NR PIS+DQ   T
Sbjct: 283 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQI-VT 341

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             G ++L+ II GP++T PE  V+RQ MKQ+               +L LHFG NG+TP+
Sbjct: 342 TQGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQ 401

Query: 13  SCDE 2
           S +E
Sbjct: 402 SFEE 405



 Score = 81.3 bits (199), Expect(2) = 2e-39
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLL GA++F+P KG+KLSTY YWWI+QAI RA+  KSR IRLPG
Sbjct: 235 QEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLPG 283


>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
           gi|482556540|gb|EOA20732.1| hypothetical protein
           CARUB_v10001054mg [Capsella rubella]
          Length = 419

 Score = 98.2 bits (243), Expect(2) = 3e-39
 Identities = 56/124 (45%), Positives = 79/124 (63%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GSM E+ A++A+ +  LT KL R P+ EEIA+   + VS +RLA   +R+P+SLD+   +
Sbjct: 258 GSMWELTARVAEASNVLTRKLRRQPSCEEIAEHLNLHVSAVRLAVEKSRSPVSLDRV-AS 316

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
            +G +TL+EI+ GPDETRPE MV+R+ +K N               VL L+FG NGETP 
Sbjct: 317 QNGRMTLQEIVRGPDETRPEEMVKREHIK-NEIEQLLGSLTARESRVLGLYFGLNGETPM 375

Query: 13  SCDE 2
           S +E
Sbjct: 376 SFEE 379



 Score = 89.7 bits (221), Expect(2) = 3e-39
 Identities = 40/49 (81%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI  KSR ++LPG
Sbjct: 210 QEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKSRLVKLPG 258


>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Solanum tuberosum]
          Length = 421

 Score =  104 bits (260), Expect(2) = 1e-38
 Identities = 56/124 (45%), Positives = 76/124 (61%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           GS+ E+V KI   NT L+ KL R P+Y+EIA+  G+DVS +RL    NR PIS+DQ   T
Sbjct: 262 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQI-VT 320

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             G ++L+ II GP++T PE  V+RQ MKQ+               +L LHFG NG+ P+
Sbjct: 321 SQGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQ 380

Query: 13  SCDE 2
           S +E
Sbjct: 381 SFEE 384



 Score = 81.3 bits (199), Expect(2) = 1e-38
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLL GA++F+P KG+KLSTY YWWI+QAI RA+  KSR IRLPG
Sbjct: 214 QEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLPG 262


>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331146|gb|ERP56881.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 423

 Score =  102 bits (254), Expect(2) = 3e-38
 Identities = 56/119 (47%), Positives = 74/119 (62%)
 Frame = -3

Query: 358 MVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPTLHGCV 179
           +VAKIA  N  L++KL R P+Y+EIA    + VS +RL     R+PISLDQ     +  +
Sbjct: 269 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNS-L 327

Query: 178 TLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPKSCDE 2
           TL+EIIPGPDET PE MV+R+ +KQ                +L LHFG NG+TP+SC+E
Sbjct: 328 TLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEE 386



 Score = 82.0 bits (201), Expect(2) = 3e-38
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 375
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI   +R +RLP
Sbjct: 216 QEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMVRLP 263


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score = 91.7 bits (226), Expect(2) = 1e-37
 Identities = 50/124 (40%), Positives = 73/124 (58%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           G MC ++AKI +       +  R P+++EIA+   +  S++RL    +R P+SLD+   T
Sbjct: 294 GHMCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRV-VT 352

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
             GC+ L++II GPDE  PETM+++Q MKQ              E VL LHFG NG+TP+
Sbjct: 353 DQGCMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAE-VLRLHFGLNGDTPQ 411

Query: 13  SCDE 2
           S +E
Sbjct: 412 SFEE 415



 Score = 90.5 bits (223), Expect(2) = 1e-37
 Identities = 42/49 (85%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEGSIGLLRGAE+FDP +G KLSTYVYWWI+QAIIRAIE KSR IRLPG
Sbjct: 246 QEGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKSRIIRLPG 294


>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331145|gb|ERP56880.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 419

 Score =  102 bits (254), Expect(2) = 3e-36
 Identities = 56/119 (47%), Positives = 74/119 (62%)
 Frame = -3

Query: 358 MVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPTLHGCV 179
           +VAKIA  N  L++KL R P+Y+EIA    + VS +RL     R+PISLDQ     +  +
Sbjct: 265 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNS-L 323

Query: 178 TLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPKSCDE 2
           TL+EIIPGPDET PE MV+R+ +KQ                +L LHFG NG+TP+SC+E
Sbjct: 324 TLQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEE 382



 Score = 75.5 bits (184), Expect(2) = 3e-36
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIR 381
           QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI   +R  R
Sbjct: 216 QEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNTRMRR 261


>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
           gi|561022159|gb|ESW20889.1| hypothetical protein
           PHAVU_005G023100g [Phaseolus vulgaris]
          Length = 367

 Score = 93.2 bits (230), Expect(2) = 1e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%)
 Frame = -3

Query: 361 EMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPTLHGC 182
           EMVAK+A+ N  L+S+L R PTY+E A+   +  S IRL S  +R PISLD+   T  G 
Sbjct: 213 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKV-VTDCGH 271

Query: 181 VTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPKSCDE 2
           +TL+EIIPGP++  PE MV+RQ MKQ              E V  L++G NGETP +  E
Sbjct: 272 MTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVT-LYYGLNGETPLTFKE 330



 Score = 82.8 bits (203), Expect(2) = 1e-35
 Identities = 35/48 (72%), Positives = 45/48 (93%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 375
           QEG++GLLRGAE+F+P +G+KLSTYVYWWIKQA+I+AI +KSR +RLP
Sbjct: 161 QEGTVGLLRGAEKFEPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLP 208


>ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
           gi|561022157|gb|ESW20887.1| hypothetical protein
           PHAVU_005G023100g [Phaseolus vulgaris]
          Length = 366

 Score = 93.2 bits (230), Expect(2) = 1e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%)
 Frame = -3

Query: 361 EMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPTLHGC 182
           EMVAK+A+ N  L+S+L R PTY+E A+   +  S IRL S  +R PISLD+   T  G 
Sbjct: 212 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKV-VTDCGH 270

Query: 181 VTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPKSCDE 2
           +TL+EIIPGP++  PE MV+RQ MKQ              E V  L++G NGETP +  E
Sbjct: 271 MTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVT-LYYGLNGETPLTFKE 329



 Score = 82.8 bits (203), Expect(2) = 1e-35
 Identities = 35/48 (72%), Positives = 45/48 (93%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 375
           QEG++GLLRGAE+F+P +G+KLSTYVYWWIKQA+I+AI +KSR +RLP
Sbjct: 160 QEGTVGLLRGAEKFEPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLP 207


>ref|XP_007148892.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
           gi|561022156|gb|ESW20886.1| hypothetical protein
           PHAVU_005G023100g [Phaseolus vulgaris]
          Length = 296

 Score = 93.2 bits (230), Expect(2) = 1e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%)
 Frame = -3

Query: 361 EMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPTLHGC 182
           EMVAK+A+ N  L+S+L R PTY+E A+   +  S IRL S  +R PISLD+   T  G 
Sbjct: 142 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKV-VTDCGH 200

Query: 181 VTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPKSCDE 2
           +TL+EIIPGP++  PE MV+RQ MKQ              E V  L++G NGETP +  E
Sbjct: 201 MTLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVT-LYYGLNGETPLTFKE 259



 Score = 82.8 bits (203), Expect(2) = 1e-35
 Identities = 35/48 (72%), Positives = 45/48 (93%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLP 375
           QEG++GLLRGAE+F+P +G+KLSTYVYWWIKQA+I+AI +KSR +RLP
Sbjct: 90  QEGTVGLLRGAEKFEPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLP 137


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score = 89.0 bits (219), Expect(2) = 5e-35
 Identities = 52/124 (41%), Positives = 73/124 (58%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           G M +MVA+IA+ N  L  KL R PT +E+A++  + +S IRL    ++ PIS++Q P  
Sbjct: 278 GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQ-PVN 336

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
              C+TL+EI+PGPD   PE MV R+ MKQ                +L L+FG NGE P+
Sbjct: 337 DRSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREAR-ILSLYFGLNGEIPQ 395

Query: 13  SCDE 2
           S +E
Sbjct: 396 SFEE 399



 Score = 84.7 bits (208), Expect(2) = 5e-35
 Identities = 36/49 (73%), Positives = 45/49 (91%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPG 372
           QEG+IGLL+GAERF+P +G KLSTY YWWI+QAIIRA+++KSR +RLPG
Sbjct: 230 QEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLPG 278


>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 403

 Score = 90.1 bits (222), Expect(2) = 5e-35
 Identities = 57/124 (45%), Positives = 72/124 (58%)
 Frame = -3

Query: 373 GSMCEMVAKIAKTNTALTSKLGRWPTYEEIADTAGIDVSVIRLASMSNRTPISLDQTPPT 194
           G    MVAKIA+ N  L  +L R PTY EIA+   ++VS ++L S  +R PISLD++  T
Sbjct: 245 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRS-IT 303

Query: 193 LHGCVTLKEIIPGPDETRPETMVRRQQMKQNXXXXXXXXXXXXXEFVLYLHFGPNGETPK 14
               + LKEIIPGP E  PE MV RQ MKQ              E ++ L+FG NGETP 
Sbjct: 304 DQSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEE-IVRLYFGLNGETPL 362

Query: 13  SCDE 2
           S +E
Sbjct: 363 SFEE 366



 Score = 83.6 bits (205), Expect(2) = 5e-35
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -2

Query: 518 QEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKSRTIRLPGK 369
           QEG+IGLL GAE+FDP +G KLSTYVYWWIKQ II+A+ +KSR IRLPG+
Sbjct: 197 QEGTIGLLHGAEKFDPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLPGE 246