BLASTX nr result

ID: Papaver27_contig00013559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00013559
         (1974 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]    47   4e-06
ref|XP_002300075.1| hypothetical protein POPTR_0001s36090g [Popu...    49   8e-06

>emb|CAN73832.1| hypothetical protein VITISV_043069 [Vitis vinifera]
          Length = 239

 Score = 46.6 bits (109), Expect(2) = 4e-06
 Identities = 25/75 (33%), Positives = 44/75 (58%)
 Frame = -3

Query: 526 CFCNNFLGTSFQSLSQAQKEQQDSKTKCYVRSQHSNIISDGGMDPLLPVEENPLNSPKSA 347
           CFCN+F   SF+S ++ +KE  D   +     +   +  +G ++  +P++E+  +SP SA
Sbjct: 16  CFCNSFFTASFRSHAR-RKELIDYINEGNGGVEQFQLKXEGELNQSVPLDESYSSSPNSA 74

Query: 346 RSYGDKHLEIINFRH 302
           +S+ D  LEI + RH
Sbjct: 75  KSFSDTQLEIFHHRH 89



 Score = 33.1 bits (74), Expect(2) = 4e-06
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -1

Query: 300 RIGLGQNLPWSLYSGVCICVIF 235
           RIG+GQ+ PW L S +C+ VIF
Sbjct: 112 RIGMGQSFPWLLDSALCVGVIF 133


>ref|XP_002300075.1| hypothetical protein POPTR_0001s36090g [Populus trichocarpa]
           gi|222847333|gb|EEE84880.1| hypothetical protein
           POPTR_0001s36090g [Populus trichocarpa]
          Length = 834

 Score = 49.3 bits (116), Expect(2) = 8e-06
 Identities = 34/92 (36%), Positives = 42/92 (45%), Gaps = 12/92 (13%)
 Frame = -3

Query: 541 SITVSCFCNNFLGTSFQSLSQA------------QKEQQDSKTKCYVRSQHSNIISDGGM 398
           +IT+ CF    LG     LS A             KE  D K     RSQ      D G+
Sbjct: 612 AITLGCFVQPALGLFILILSHALCCHNALCSHARMKELLDFKDVGNERSQQFASKHDAGL 671

Query: 397 DPLLPVEENPLNSPKSARSYGDKHLEIINFRH 302
           D    +EEN  +SP S+RS+GD  LEI + RH
Sbjct: 672 DQNFQLEENSSSSPDSSRSFGDTQLEIFHHRH 703



 Score = 29.3 bits (64), Expect(2) = 8e-06
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 300 RIGLGQNLPWSLYSGVCICVI 238
           RIG+G + PW L S +CI VI
Sbjct: 726 RIGMGHSFPWFLDSALCIGVI 746


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