BLASTX nr result
ID: Papaver27_contig00012837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00012837
(1585 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 368 4e-99
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 365 3e-98
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 316 2e-83
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 309 2e-81
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 309 3e-81
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 308 3e-81
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 299 2e-78
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 296 2e-77
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun... 293 1e-76
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 291 7e-76
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 291 7e-76
ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III s... 282 3e-73
ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III s... 281 8e-73
ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III s... 277 1e-71
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 270 1e-69
ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III s... 268 5e-69
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 262 3e-67
ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|1017... 261 6e-67
ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5... 257 9e-66
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 254 8e-65
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 368 bits (945), Expect = 4e-99
Identities = 203/434 (46%), Positives = 281/434 (64%), Gaps = 10/434 (2%)
Frame = +1
Query: 31 GPSRTKGNLVRPLNGPDIEVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYD 210
G + + ++ L+ + + E WV L+YH +S FS+R+ QKM +E+++PIQF M+PY+
Sbjct: 252 GSLKKQNKIMGILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYE 311
Query: 211 YVNSLCPP-TPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEE 387
YVNSLCPP +DNRSK RR +S+PLEE+FK EG V+RF+++K+ AP + E
Sbjct: 312 YVNSLCPPGVSNDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVE 371
Query: 388 IVLQEIQKHANLVQGLWVCRTNLLPLKGAEAA--SRDYILCLFRKSDLIPAKILSE--YR 555
VL + KHA+LVQGLWV +++LL G A +RDYIL LF K LI +
Sbjct: 372 DVLGVLTKHAHLVQGLWVPKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSL 431
Query: 556 KETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNER 735
+ +K ++ LAV R + RDWKFK PTDV F+K HP+IV+EQ +W EK++ ++++
Sbjct: 432 NKALKGFLSILAVERPSFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGG 491
Query: 736 SMRMKL-----KPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQ 900
R + KPS+A K S ++ + + +MS ETREALPK LE++FR
Sbjct: 492 GRRGPVTKNSGKPSIANKTGTSTKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRL 551
Query: 901 DKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVY 1080
K+CS QLI LR+ AV KS PK R F AAA GAD P EL +IS+ AT +HGVY
Sbjct: 552 HKVCSFQLICQALRDLAVSKSTSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVY 611
Query: 1081 VAKSSENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELC 1260
V K+SE++ NPLR +V+ LF KEP+AKL++AD+ EAAK LK+E+T EY++V SELC
Sbjct: 612 VWKTSEHSEHNPLRKVVVDLFCGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELC 671
Query: 1261 VSVKGNAWVLKSGD 1302
S +G+ WVLKSGD
Sbjct: 672 ES-RGSLWVLKSGD 684
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 365 bits (937), Expect = 3e-98
Identities = 200/413 (48%), Positives = 272/413 (65%), Gaps = 10/413 (2%)
Frame = +1
Query: 94 EPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPP-TPTEDNRSKSSL 270
+ WV L+YH +S FS+R+ QKM +E+++PIQF M+PY+YVNSLCPP +DNRSK
Sbjct: 257 QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 316
Query: 271 RRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRT 450
RR +S+PLEE+FK EG V+RF+++K+ AP + E VL + KHA+LVQGLWV ++
Sbjct: 317 RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 376
Query: 451 NLLPLKGAEAA--SRDYILCLFRKSDLIPAKILSE--YRKETVKEIMTSLAVYRDTCRDW 618
+LL G A +RDYIL LF K LI + + +K ++ LAV R + RDW
Sbjct: 377 SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDW 436
Query: 619 KFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKL-----KPSMATKFPA 783
KFK PTDV F+K HP+IV+EQ +W EK++ ++++ R + KPS+A K
Sbjct: 437 KFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTGT 496
Query: 784 SGNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRHRLREQAVEKS 963
S ++ + + +MS ETREALPK LE++FR K+CS QLI LR+ AV KS
Sbjct: 497 STKSDGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKS 556
Query: 964 ARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSSENTTPNPLRDIVIQLF 1143
PK R F AAA GAD P EL +IS+ AT +HGVYV K+SE++ NPLR +V+ LF
Sbjct: 557 TSPKVDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLF 616
Query: 1144 SAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLKSGD 1302
KEP+AKL++AD+ EAAK LK+E+T EY++V SELC S +G+ WVLKSGD
Sbjct: 617 CGKEPNAKLKRADIMEAAKIALKKEITTHEYNKVVSELCES-RGSLWVLKSGD 668
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 316 bits (810), Expect = 2e-83
Identities = 178/413 (43%), Positives = 260/413 (62%), Gaps = 12/413 (2%)
Frame = +1
Query: 91 DEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKSSL 270
+E WV L+YHG S FS+R+ Q+M EE++PI F+MNPYDYV+SLCP + + +SK
Sbjct: 279 EECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNNTKSKGPS 338
Query: 271 RRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRT 450
RR +S+PLEE+FKK EG+ V RF+++ + AP D E V+ + K+ LVQGLW R+
Sbjct: 339 RRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQGLWAPRS 398
Query: 451 NLL-PLKGAEAASRDYILCLFRKSDLIPAKILSEYRK--ETVKEIMTSLAVYRDTCRDWK 621
LL + +RDY+L F K+ ++ + LS K + +K + AV R +DWK
Sbjct: 399 PLLFNNDKMKCLARDYVLLSFSKNSVVKFQHLSVSPKLRDHIKCFLNIFAVERPDFKDWK 458
Query: 622 FKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKL------KPSMATKFPA 783
F+ TD+ FIK+HP IV +QE +W EK++ +++N+ K +M K
Sbjct: 459 FRQQTDLSFIKEHPNIVIKQEQVWAAAEKQITDVINKLGKSGSTLRNDAGKSAMVNKHLK 518
Query: 784 SGNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRHRLREQAVEKS 963
+ N+++G ++ + ++S+E+REALPK L+ +F+ K+CSL LI+ LR+ A+ +S
Sbjct: 519 AINSSNGPSGAL---TGNKNLSNESREALPKALQKLFQIHKVCSLPLIKQGLRDLAISQS 575
Query: 964 ARPKPQSRAFRAAALGAD---IPPSELEPLISQVATNIHGVYVAKSSENTTPNPLRDIVI 1134
PK +R AA D + E +ISQVATNIHG YV+KSSE+ PLR +V
Sbjct: 576 TLPKADARMTVLAAEIVDSSFVDTQEFAEVISQVATNIHGFYVSKSSEDPQHGPLRKVVT 635
Query: 1135 QLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLK 1293
L A P AKL+KADV EAA++VLKRE++NAEYS+V S++C S KG+AW+LK
Sbjct: 636 DLLLAGGPDAKLKKADVVEAARHVLKREISNAEYSKVMSDICES-KGSAWILK 687
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Cucumis
sativus]
Length = 702
Score = 309 bits (792), Expect = 2e-81
Identities = 177/428 (41%), Positives = 266/428 (62%), Gaps = 14/428 (3%)
Frame = +1
Query: 73 GPDIEV----DEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTP 240
GP EV +E W+ L+Y+G++S S+R Q M S+ +P+QFSM+P+DY++SLCP T
Sbjct: 277 GPSTEVKTRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTS 336
Query: 241 TEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAP-YDPEEIVLQEIQKHA 417
T N+ K ++ +SL LEE+ KK +EG V RF+++K+ AP Y+ EE + + +Q++A
Sbjct: 337 TSGNKPKGPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFI-ETLQQYA 395
Query: 418 NLVQGLWVCRT-NLLPLKGAEAASRDYILCLFRKSDLIPAKILS--EYRKETVKEIMTSL 588
LVQGLWV ++ L+P G+ +RD++L LF K+ ++ + ++ + ++ VK +
Sbjct: 396 QLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLF 455
Query: 589 AVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMR----MKLK 756
V R +DWKFK TD F+ +H I ++QE LW EK + + +S+ K
Sbjct: 456 GVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGK 515
Query: 757 PSMATKFPASGNTNSGVKKSVN-ETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRH 933
P + K +++ KS N + +MSDETREALPK L+ +F+ K+CS QLI
Sbjct: 516 PGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQ 575
Query: 934 RLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSS-ENTTP 1110
LR+ AV +S PK +R AAA G D PP EL+ +ISQVAT IHG+YV SS E+
Sbjct: 576 GLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELKKIISQVATEIHGLYVLTSSPEHPEY 635
Query: 1111 NPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVL 1290
+PLR +VIQL + P A L+KADV EA+K+ L R + + EYS+V +E+C+S G++W L
Sbjct: 636 DPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICIS-HGSSWTL 694
Query: 1291 KSGDEGAK 1314
KSGD ++
Sbjct: 695 KSGDGNSR 702
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 309 bits (791), Expect = 3e-81
Identities = 184/444 (41%), Positives = 271/444 (61%), Gaps = 10/444 (2%)
Frame = +1
Query: 1 VKSEKTNGGPGPSRTKGNLVRPLNGPDIEVD--EPWVSLEYHGVDSIFSSRFRQKMTSEE 174
VK E+ N G + R + + + D E WV L+YH + FS+++ Q+M +EE
Sbjct: 258 VKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEE 317
Query: 175 STPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFAS 354
S IQF+M+PYDYV+SLCP + +N+++ RRL +S+PLEE+ KK SEG +RF++
Sbjct: 318 SCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSA 376
Query: 355 IKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL-PLKGAEAASRDYILCLFRKSDLIP 531
+K+ AP E + + +QKHA LVQGLWV +++LL P ++ +RDY+L LF K+ +I
Sbjct: 377 LKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIIS 436
Query: 532 ---AKILSEYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIR 702
LS RKE VK + LA+ R + +DWK K D F K +P+IVK QE +W
Sbjct: 437 LAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAG 496
Query: 703 EKKMIEML--NERSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPK 876
E +I + + + KP K + N++ GV++ + +MSDETREA+PK
Sbjct: 497 EDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPK 556
Query: 877 VLEDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQV 1056
L+ +F+ K+CSLQLIR LR+ A+ +S PK +R AA GAD P EL+ ++S+V
Sbjct: 557 ALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPEHELQEVVSEV 616
Query: 1057 ATNIH-GVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNA 1230
A +H G++V +SS E+ +PLR++VI L K KL+KADV+ AA LKRE++N
Sbjct: 617 AVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSAAALLSLKREISNN 673
Query: 1231 EYSQVTSELCVSVKGNAWVLKSGD 1302
EY++V S+ C K + WVLKSGD
Sbjct: 674 EYNKVMSDFC-EYKSSWWVLKSGD 696
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 308 bits (790), Expect = 3e-81
Identities = 177/428 (41%), Positives = 265/428 (61%), Gaps = 14/428 (3%)
Frame = +1
Query: 73 GPDIEV----DEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTP 240
GP EV +E W+ L+Y+G++S S+R Q M S+ +P+QFSM+P+DY++SLCP T
Sbjct: 277 GPSTEVKTRDEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTS 336
Query: 241 TEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAP-YDPEEIVLQEIQKHA 417
T N+ K ++ +SL LEE+ KK +EG V RF+++K+ AP Y+ EE + + +Q++A
Sbjct: 337 TSGNKPKGPSKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFI-ETLQQYA 395
Query: 418 NLVQGLWVCRT-NLLPLKGAEAASRDYILCLFRKSDLIPAKILS--EYRKETVKEIMTSL 588
LVQGLWV ++ L+P G+ +RD++L LF K+ ++ + ++ + ++ VK +
Sbjct: 396 QLVQGLWVPKSLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPKSLRDRVKHFLNLF 455
Query: 589 AVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMR----MKLK 756
V R +DWKFK TD F+ +H I ++QE LW EK + + +S+ K
Sbjct: 456 GVERPAFKDWKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGK 515
Query: 757 PSMATKFPASGNTNSGVKKSVN-ETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRH 933
P + K +++ KS N + +MSDETREALPK L+ +F+ K+CS QLI
Sbjct: 516 PGVVPKLEKQVSSDQTTTKSSNAPLNRKGAMSDETREALPKALQKLFQNHKVCSFQLICQ 575
Query: 934 RLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSS-ENTTP 1110
LR+ AV +S PK +R AAA G D PP EL +ISQVAT IHG+YV SS E+
Sbjct: 576 GLRDLAVSQSTLPKADARMAVAAAYGVDAPPDELXKIISQVATEIHGLYVLTSSPEHPEY 635
Query: 1111 NPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVL 1290
+PLR +VIQL + P A L+KADV EA+K+ L R + + EYS+V +E+C+S G++W L
Sbjct: 636 DPLRKVVIQLLRGRGPKAVLKKADVLEASKHELGRAINSNEYSKVMNEICIS-HGSSWTL 694
Query: 1291 KSGDEGAK 1314
KSGD ++
Sbjct: 695 KSGDGNSR 702
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 299 bits (766), Expect = 2e-78
Identities = 174/402 (43%), Positives = 244/402 (60%), Gaps = 20/402 (4%)
Frame = +1
Query: 100 WVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRL 279
W+SL+YHG S FSSR+ +KM ++ES+P++F+M PYDY++SLCP E +SK RR
Sbjct: 270 WISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRF 329
Query: 280 CMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL 459
+SLPL E+ KK EG V RF+ +K+ AP D E VL+ +Q++ LVQGLW +++LL
Sbjct: 330 LLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLL 389
Query: 460 -PLKGAEAASRDYILCLFRKSDLI-------PAKILSEYRKETVKEIMTSLAVYRDTCRD 615
P ++ RDY+L LF K+ +I P KI KE +K + AV R + +D
Sbjct: 390 FPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKI-----KEEIKSFLNLFAVERPSFKD 444
Query: 616 WKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKLKPSMATKFPASGNT 795
WKFK TD FIK +P+IVK+QE W EK++ ++ + K SM P
Sbjct: 445 WKFKEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFDRSG-----KASMKNAIPKPPMV 499
Query: 796 NSGVKKSVNETS-----------STASMSDETREALPKVLEDIFRQDKICSLQLIRHRLR 942
++ VK +E S + +++ ETREAL K L +F+ K+CS QLI LR
Sbjct: 500 HNTVKHLDSEKSMPKIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLR 559
Query: 943 EQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSS-ENTTPNPL 1119
+ AV +S PK R AAA GAD PP EL+ +ISQVATNIHG YV KSS E+ + L
Sbjct: 560 DLAVSQSTLPKADPRIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDEL 619
Query: 1120 RDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQV 1245
R ++I L A+ P+AKL+KA+V EAA+ KR++TN EY+++
Sbjct: 620 RKVIIDLLLARGPNAKLKKAEVFEAARLAFKRDVTNIEYNKL 661
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 296 bits (758), Expect = 2e-77
Identities = 174/416 (41%), Positives = 258/416 (62%), Gaps = 10/416 (2%)
Frame = +1
Query: 85 EVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKS 264
+V+E W+ L+YHG S SSR+ Q M + ES+ I+F+MNPYDY++SLCP + +
Sbjct: 270 DVEESWIPLKYHGSKSDLSSRYLQNMVAPESSTIEFAMNPYDYMSSLCPGISNNNIKLNG 329
Query: 265 SLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVC 444
RR+ +SLPLEE+ K+ F EG ++RFA++++L P D E +L +Q++ LVQGLWV
Sbjct: 330 PSRRVLLSLPLEERIKRLFLEGPPIHRFAALRHLIPNDSIEDLLIVLQEYGQLVQGLWVP 389
Query: 445 RTNLL-----PLKGAEAASRDYILCLFRKSDLI-PAKILSEYRKETVKEIMTSLAVYRDT 606
+T+LL P + + A+RDYIL LF KS ++ P+++ + +K + AV R +
Sbjct: 390 KTSLLFPNPKPTEKVKLAARDYILLLFSKSLVVTPSELNVPMKPLILKSFLNIFAVERPS 449
Query: 607 CRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKLKPSMATKFPAS 786
+DWKFK D F++ +P+IV++QE W + K +++ F +
Sbjct: 450 FKDWKFKENVDTLFVELYPDIVRKQEQAWEVMGK-----------------NISAAFDRA 492
Query: 787 GNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKIC--SLQLIRHRLREQAVEK 960
G + V K+V T +M+DETREAL K L + + K+C Q+I LR+ A+ +
Sbjct: 493 GKS---VSKNV-ITKPKKTMTDETREALRKALPKVLQTHKVCRYGFQMICQGLRQLAISQ 548
Query: 961 SARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSS-ENTTPNPL-RDIVI 1134
S PK R AAA GA+ PP EL+ +IS+VATNIHG YV KSS E+ +PL R +VI
Sbjct: 549 STLPKADPRIAVAAASGAEAPPEELQEVISEVATNIHGFYVLKSSPEHPDFDPLSRKVVI 608
Query: 1135 QLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLKSGD 1302
LF A+ P+A ++K++V AA+ LKRE +N+EY +V ++LC S KG+AWVLKSGD
Sbjct: 609 GLFLARGPNANIKKSEVQAAARLELKREPSNSEYIKVMTDLCES-KGSAWVLKSGD 663
>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
gi|462397466|gb|EMJ03134.1| hypothetical protein
PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 293 bits (750), Expect = 1e-76
Identities = 181/450 (40%), Positives = 264/450 (58%), Gaps = 17/450 (3%)
Frame = +1
Query: 10 EKTNGGPGPSRTKGNLVRPLNGPDIEVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQ 189
++T+ GP +TK + E +E WV L+YH +S FS+++ ++M +ES+PIQ
Sbjct: 256 QETSSGPSKKQTKR--MESSTEKKTEDEESWVPLQYHSSESDFSAKYLRRMVGQESSPIQ 313
Query: 190 FSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASI-KYL 366
F+M+PYDYVNSLCP T K S RR +SLPLEE+ KK E RF+ + KY
Sbjct: 314 FTMSPYDYVNSLCPRT------CKGSSRRFLLSLPLEERIKKLLVEEPLARRFSDLKKYF 367
Query: 367 APYDPEEIVLQEIQKHANLV--QGLWVCRTNLL-PLKG-------AEAASRDYILCLFRK 516
AP E +L +QKHA L+ GLWV +T LL P K A +R+Y+L LFRK
Sbjct: 368 APDHTGEELLDVLQKHAQLLLDSGLWVPKTLLLYPSKDMKDRDHVARQTARNYVLNLFRK 427
Query: 517 SDLIPAKILS--EYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESL 690
+ +I L+ + K E + LAV R + +DWK K +D F + +P+I K QE
Sbjct: 428 NTVISNSQLNLPQNHKNHAYESLKILAVSRPSSQDWKLKEQSDKSFKELYPDIFKSQEQN 487
Query: 691 WVIREKKMIEMLNERSMRMKLKPSMATKFPASGNTNSGVKKSVNETS-STASMSDETREA 867
W E+K++ + R M +K S N++ G KS ++ +MSDETR A
Sbjct: 488 WERMEEKLVNAFKAHTDRGVKNACMTSKPGKSLNSDKGTTKSASDVQIGGRTMSDETRAA 547
Query: 868 LPKVLEDIFRQDKICSLQLIRHRLREQAVEKSARPK--PQSRAFRAAALGADIPPSELEP 1041
LP+ ++++ + K+C+ +LI LR AV KS+ PK P+++ AA G D P EL+
Sbjct: 548 LPEAIKEVLHEHKVCNFRLICEGLRRLAVRKSSLPKVDPKTKRVIDAAYGVDAPQHELQK 607
Query: 1042 LISQVATNIHGVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKRE 1218
+I QVA +IHG+YV KSS E++ + LR +VI L K P+AKL++ +V EAAK L+R+
Sbjct: 608 VICQVAADIHGLYVLKSSPEHSEHDRLRKVVIDLLCTKGPNAKLKRGEVFEAAKIALERD 667
Query: 1219 MTNAEYSQVTSELCVSVKGNAWVLKSGDEG 1308
+ EY++V ++ CV KG+AW+LKSGD G
Sbjct: 668 INTNEYNKVMNDFCV-FKGSAWILKSGDGG 696
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 291 bits (744), Expect = 7e-76
Identities = 184/480 (38%), Positives = 271/480 (56%), Gaps = 46/480 (9%)
Frame = +1
Query: 1 VKSEKTNGGPGPSRTKGNLVRPLNGPDIEVD--EPWVSLEYHGVDSIFSSRFRQKMTSEE 174
VK E+ N G + R + + + D E WV L+YH + FS+++ Q+M +EE
Sbjct: 258 VKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEE 317
Query: 175 STPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFAS 354
S IQF+M+PYDYV+SLCP + +N+++ RRL +S+PLEE+ KK SEG +RF++
Sbjct: 318 SCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSA 376
Query: 355 IKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL-PLKGAEAASRDYILCLFRKSDLIP 531
+K+ AP E + + +QKHA LVQGLWV +++LL P ++ +RDY+L LF K+ +I
Sbjct: 377 LKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIIS 436
Query: 532 ---AKILSEYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIR 702
LS RKE VK + LA+ R + +DWK K D F K +P+IVK QE +W
Sbjct: 437 LAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAG 496
Query: 703 EKKMIEML--NERSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPK 876
E +I + + + KP K + N++ GV++ + +MSDETREA+PK
Sbjct: 497 EDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPK 556
Query: 877 VLEDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQV 1056
L+ +F+ K+CSLQLIR LR+ A+ +S PK +R AA GAD P EL+ ++S+V
Sbjct: 557 ALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPEHELQEVVSEV 616
Query: 1057 ATNIH-GVYVAKSS-ENTTPNPL------------------------------------R 1122
A +H G++V +SS E+ +PL R
Sbjct: 617 AVELHGGLFVLRSSPEHPEYDPLRLHKYVQLVFKWEEMFMVSMFFLQNPSFSSELFFPCR 676
Query: 1123 DIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLKSGD 1302
++VI L K KL+KADV+ AA LKRE++N EY++V S+ C K + WVLKSGD
Sbjct: 677 EVVINLLRVK---GKLKKADVSAAALLSLKREISNNEYNKVMSDFC-EYKSSWWVLKSGD 732
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 291 bits (744), Expect = 7e-76
Identities = 173/432 (40%), Positives = 261/432 (60%), Gaps = 10/432 (2%)
Frame = +1
Query: 1 VKSEKTNGGPGPSRTKGNLVRPLNGPDIEVD--EPWVSLEYHGVDSIFSSRFRQKMTSEE 174
VK E+ N G + R + + + D E WV L+YH + FS+++ Q+M +EE
Sbjct: 161 VKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDKECWVPLKYHSSKNDFSAQYLQRMMAEE 220
Query: 175 STPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFAS 354
S IQF+M+PYDYV+SLCP + +N+++ RRL +S+PLEE+ KK SEG +RF++
Sbjct: 221 SCRIQFTMSPYDYVDSLCPGA-SNNNKAQGPSRRLLLSIPLEERLKKLLSEGPPFHRFSA 279
Query: 355 IKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL-PLKGAEAASRDYILCLFRKSDLIP 531
+K+ AP E + + +QKHA LVQGLWV +++LL P ++ +RDY+L LF K+ +I
Sbjct: 280 LKHFAPDASIEDIFEVLQKHALLVQGLWVPKSSLLFPEDPYKSLARDYVLLLFSKNPIIS 339
Query: 532 ---AKILSEYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIR 702
LS RKE VK + LA+ R + +DWK K D F K +P+IVK QE +W
Sbjct: 340 LAQVHALSPSRKEEVKGFLKILAIERPSFKDWKLKENADEGFKKLYPDIVKNQEQIWRAG 399
Query: 703 EKKMIEML--NERSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPK 876
E +I + + + KP K + N++ GV++ + +MSDETREA+PK
Sbjct: 400 EDNVINHICRGAKGGPSRTKPGTVIKPEKAMNSDKGVRRVAPAVQAGRTMSDETREAIPK 459
Query: 877 VLEDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQV 1056
L+ +F+ K+CSLQLIR LR+ A+ +S PK +R AA GAD P EL+ ++S+V
Sbjct: 460 ALKKVFQTHKVCSLQLIRKGLRDLALSQSTLPKADARMVVKAAYGADAPEHELQEVVSEV 519
Query: 1057 ATNIH-GVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNA 1230
A +H G++V +SS E+ +PLR++VI L K KL+KADV+ AA LKRE++N
Sbjct: 520 AVELHGGLFVLRSSPEHPEYDPLREVVINLLRVK---GKLKKADVSAAALLSLKREISNN 576
Query: 1231 EYSQVTSELCVS 1266
EY++ + ++
Sbjct: 577 EYNKALRNMDIA 588
>ref|XP_004245771.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Solanum
lycopersicum]
Length = 669
Score = 282 bits (721), Expect = 3e-73
Identities = 178/442 (40%), Positives = 261/442 (59%), Gaps = 11/442 (2%)
Frame = +1
Query: 10 EKTNGGPGPSRTKGNLVRPLNGPDIEVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQ 189
EK GP + K G + ++ E W+ L+YHG S S+R+ QKM+ EE +P+
Sbjct: 239 EKRPVGPSKKQNKSP------GIEKDIGEHWLHLKYHGARSDISARYLQKMSMEEGSPVP 292
Query: 190 FSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLA 369
FSM+P DY+N+ CP PT+ +R K LR LPLEE+ + W EG ++RF ++ +LA
Sbjct: 293 FSMSPVDYLNAFCPGRPTDTDRLK-ILRTRLSQLPLEERVRIWLLEGPPIHRFDALMHLA 351
Query: 370 PYDPEEIVLQEIQKHANLVQGLWVCRTNLL--PLKGAEAASRDYILCLFRKSDLIPAKIL 543
P + + +++ +Q +A LVQGLWV +++L+ G E +R+++L F K LI +
Sbjct: 352 PDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVF 411
Query: 544 SEYRKETVK---EIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKM 714
R E +K + SLAV R DWK K D +F + ++V+EQ++ W K++
Sbjct: 412 GR-RPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQI 470
Query: 715 IEMLNERSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTA----SMSDETREALPKVL 882
++L + +P+M K P + N + S ++ +S++ SMS+E REALPK L
Sbjct: 471 NDVLPGG----RTRPTM--KNPINRNADITALPSGDKPTSSSLLRTSMSEEIREALPKAL 524
Query: 883 EDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSR-AFRAAALGADIPPSELEPLISQVA 1059
+++FR K+CS Q IR LR+ V KS PK R A A+ D P E++ +I+QVA
Sbjct: 525 QEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVA 584
Query: 1060 TNIHGVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEY 1236
NIHGVYV KSS +N + LR IVI LF A+ P AKL+KA V EAAK L R++TN E+
Sbjct: 585 VNIHGVYVLKSSPDNPQYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEF 644
Query: 1237 SQVTSELCVSVKGNAWVLKSGD 1302
+V ELC S K +AWVL+SGD
Sbjct: 645 LKVMKELCHSEK-SAWVLRSGD 665
>ref|XP_006355441.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X1 [Solanum tuberosum]
Length = 669
Score = 281 bits (718), Expect = 8e-73
Identities = 175/442 (39%), Positives = 256/442 (57%), Gaps = 11/442 (2%)
Frame = +1
Query: 10 EKTNGGPGPSRTKGNLVRPLNGPDIEVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQ 189
EK GP + K G + ++ E W+ L+YHG S S+R+ QKM EE +P+
Sbjct: 239 EKRPMGPSKKQNKPP------GIEKDIGEHWLHLKYHGARSDISARYLQKMAMEEGSPVP 292
Query: 190 FSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLA 369
FSM+P DY+N+ P PT+ +R K LR LPLEE+ + W EG ++RF ++K+LA
Sbjct: 293 FSMSPVDYLNAFFPGRPTDTDRLK-ILRTRLSQLPLEERVRTWLLEGPPIHRFDALKHLA 351
Query: 370 PYDPEEIVLQEIQKHANLVQGLWVCRTNLL--PLKGAEAASRDYILCLFRKSDLIPAKIL 543
P + + +++ +Q +A LVQGLWV +++L+ G E +R+++L F K LI +
Sbjct: 352 PDNSADEIIRVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVF 411
Query: 544 SEYRKETVK---EIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKM 714
R E +K + SLAV R DWK K D +F + ++V+E+++ W K++
Sbjct: 412 GR-RPEFLKAATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREKQATWECLGKQI 470
Query: 715 IEML----NERSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPKVL 882
++L N +M+ L P+ SG+ K + + SMS+E REALPK L
Sbjct: 471 NDVLPGGRNRPTMKNPLNPNADIPALPSGD------KPTSSSLLRTSMSEEIREALPKAL 524
Query: 883 EDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGA-DIPPSELEPLISQVA 1059
+++FR K+CS Q IR LR+ V KS PK R A++ D P E++ +I+QVA
Sbjct: 525 QEVFRTYKVCSFQQIRQGLRKLGVSKSYPPKGAPRKAITASIDVFDAPQEEIQAVINQVA 584
Query: 1060 TNIHGVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEY 1236
NIHGVYV KSS +N + LR +VI LF A+ P AKL+KA V EAAK L R++TN E+
Sbjct: 585 VNIHGVYVLKSSPDNPQYDTLRKVVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEF 644
Query: 1237 SQVTSELCVSVKGNAWVLKSGD 1302
+V ELC S K +AWVL+SGD
Sbjct: 645 LKVMKELCHSEK-SAWVLRSGD 665
>ref|XP_006355442.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like isoform
X2 [Solanum tuberosum]
Length = 657
Score = 277 bits (708), Expect = 1e-71
Identities = 168/412 (40%), Positives = 245/412 (59%), Gaps = 11/412 (2%)
Frame = +1
Query: 100 WVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRL 279
W+ L+YHG S S+R+ QKM EE +P+ FSM+P DY+N+ P PT+ +R K LR
Sbjct: 251 WLHLKYHGARSDISARYLQKMAMEEGSPVPFSMSPVDYLNAFFPGRPTDTDRLK-ILRTR 309
Query: 280 CMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL 459
LPLEE+ + W EG ++RF ++K+LAP + + +++ +Q +A LVQGLWV +++L+
Sbjct: 310 LSQLPLEERVRTWLLEGPPIHRFDALKHLAPDNSADEIIRVLQIYAQLVQGLWVPKSSLV 369
Query: 460 --PLKGAEAASRDYILCLFRKSDLIPAKILSEYRKETVK---EIMTSLAVYRDTCRDWKF 624
G E +R+++L F K LI + R E +K + SLAV R DWK
Sbjct: 370 YGTNSGVEVLARNFVLYEFTKGILIKKSVFGR-RPEFLKAATPALKSLAVERPDLNDWKL 428
Query: 625 KVPTDVQFIKDHPEIVKEQESLWVIREKKMIEML----NERSMRMKLKPSMATKFPASGN 792
K D +F + ++V+E+++ W K++ ++L N +M+ L P+ SG+
Sbjct: 429 KEHPDKKFENLYGDVVREKQATWECLGKQINDVLPGGRNRPTMKNPLNPNADIPALPSGD 488
Query: 793 TNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRHRLREQAVEKSARP 972
K + + SMS+E REALPK L+++FR K+CS Q IR LR+ V KS P
Sbjct: 489 ------KPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIRQGLRKLGVSKSYPP 542
Query: 973 KPQSRAFRAAALGA-DIPPSELEPLISQVATNIHGVYVAKSS-ENTTPNPLRDIVIQLFS 1146
K R A++ D P E++ +I+QVA NIHGVYV KSS +N + LR +VI LF
Sbjct: 543 KGAPRKAITASIDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNPQYDTLRKVVIDLFM 602
Query: 1147 AKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLKSGD 1302
A+ P AKL+KA V EAAK L R++TN E+ +V ELC S K +AWVL+SGD
Sbjct: 603 AEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEK-SAWVLRSGD 653
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 270 bits (691), Expect = 1e-69
Identities = 165/426 (38%), Positives = 248/426 (58%), Gaps = 12/426 (2%)
Frame = +1
Query: 1 VKSEKTNGGPGPSRTKGNLVRPLNGPDIEV--DEPWVSLEYHGVDSIFSSRFRQKMTSEE 174
VK E+++G +K + + + ++ +E WV L+YHG +S S R+ +KM +E
Sbjct: 247 VKLEESSGKKAIGSSKKQIKQENSSVKQKIADEEGWVPLKYHGSESESSVRYLRKMAVQE 306
Query: 175 STPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEG-DQVNRFA 351
S+P+QF+M+PYDY+NSLCP + N K RR +SLPLEE+ K EG V+RF+
Sbjct: 307 SSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRALLSLPLEERIKSLLCEGLAPVHRFS 366
Query: 352 SIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL----PLKGAEAASRDYILCLFRKS 519
+K+ AP + +L +Q HA LVQGLW +++LL GA+ +RDY+L LF K+
Sbjct: 367 VLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSLLLGTSKETGAQRIARDYVLLLFWKN 426
Query: 520 DLIPAKIL--SEYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLW 693
+ L K V + + L V R + +DWKFK TD+ FIK++P++VK+QE +W
Sbjct: 427 PVFSFSSLHFPSSLKTAVNKFLNILGVERPSVKDWKFKGQTDISFIKNYPDVVKKQEEVW 486
Query: 694 VIREKKMIEMLNE-RSMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREAL 870
E+ ++ M + +S R S+ ++ N+N GV K +E + D+ RE L
Sbjct: 487 GDLERDIMNMFGDGKSGRGPKNTSIPSRPVKPLNSNKGVPKGTSEVVGGKKIPDDIREVL 546
Query: 871 -PKVLEDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLI 1047
K+L + ++ K+CSLQL+ LRE A+ K PK R RAAA G P EL L+
Sbjct: 547 CSKILPKVIQEHKVCSLQLMCQGLRELALNKLNLPKADDRFARAAACGT-ASPGELVKLL 605
Query: 1048 SQVATNIHGVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMT 1224
+ A NIHG+YV KSS E+ +P R++VI L AKL+KA++ +AAK LKR++T
Sbjct: 606 DETAINIHGLYVLKSSAEHPQYDPFRNVVIDLLRQNGLAAKLKKAEIFDAAKNALKRDVT 665
Query: 1225 NAEYSQ 1242
+ EYS+
Sbjct: 666 SNEYSK 671
>ref|XP_004300617.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Fragaria vesca subsp. vesca]
Length = 685
Score = 268 bits (685), Expect = 5e-69
Identities = 170/428 (39%), Positives = 250/428 (58%), Gaps = 18/428 (4%)
Frame = +1
Query: 85 EVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKS 264
E +E WV L+YHG +S FS+ + ++M ++S+P++F+M PYDYVNSLCP T K
Sbjct: 268 EDEESWVPLQYHGSESDFSAGYLKRMVVQDSSPLEFTMTPYDYVNSLCPRT------CKG 321
Query: 265 SLRRLCMSLPLEEKFKKWFSEGDQVNRFASI-KYLAPYDPEEIVLQEIQKHANLVQGLWV 441
S +R ++LPLEE+ +K E RF+ + KY AP + E+ +L +QK+ L++GLWV
Sbjct: 322 SSKRALLNLPLEERIQKLLVEEPIARRFSDLKKYYAPRNQEKELLDVLQKNGLLLRGLWV 381
Query: 442 CRTNLL-PLKGAEA---------ASRDYILCLFRKSDLIPAKILSEY--RKETVKEIMTS 585
+T LL P K + +R++IL F+K+ +I L+ Y K E +
Sbjct: 382 PKTALLYPKKEGSSRKKDDDNLRTARNHILNSFQKNPVISYSELNVYPPLKPHFDETLKF 441
Query: 586 LAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKLKPSM 765
LAVYR + RDWK K +DV F + HP+I + QE +W +K+++E L + R SM
Sbjct: 442 LAVYRPSTRDWKLKEQSDVSFAELHPDISESQEQIWERMDKQLVEAL--KPHRDLKNASM 499
Query: 766 ATKFPASGNTNSGVKKSVNETSS--TASMSDETREALPKVLEDIFRQDKICSLQLIRHRL 939
++K N++ G KS + S +MSDET LP+ ++++F+ K+CS QLI L
Sbjct: 500 SSKTGKLPNSDKGPNKSASGAPSGGVRTMSDETLAVLPQAIKEVFKTRKVCSFQLICDTL 559
Query: 940 REQAVEKS--ARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAK-SSENTTP 1110
+E+S A+ P SR A G PP EL+ +I+Q A I GVYV K SSE+
Sbjct: 560 GNMTLERSQHAKVDPNSRKLTAVRNGLAAPPEELKNVITQFAVEIGGVYVLKSSSEHPEH 619
Query: 1111 NPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVL 1290
+ LRD+VI+L K ++K DV AA+ L RE++N EY++V +ELCVS KG+ W L
Sbjct: 620 DQLRDVVIKLLQGKN-KGPIKKLDVTVAAQEELGREISNNEYNKVMNELCVS-KGSQWYL 677
Query: 1291 KSGDEGAK 1314
KSGD K
Sbjct: 678 KSGDGSPK 685
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 262 bits (670), Expect = 3e-67
Identities = 167/428 (39%), Positives = 237/428 (55%), Gaps = 13/428 (3%)
Frame = +1
Query: 70 NGPDIEVD----EPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPT 237
+GP IE + E W+ L YHG S S + +KM +S+ IQFSMN +DYVN+LCP T
Sbjct: 261 SGPVIEQNKDTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN-HDYVNTLCPGT 319
Query: 238 PTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHA 417
E+N S R L +SLPLEE+F+ W +G ++RF ++K+LAP E +L + +HA
Sbjct: 320 SNENNGSNGPSRVL-LSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHA 378
Query: 418 NLVQGLWVCRTNLLPLK--GAEAASRDYILCLFRKSDLIPAKILSEYRK--ETVKEIMTS 585
LVQGLW+ +++LL K G +A +RDY+L LF ++ +I L + +K +++++ +
Sbjct: 379 QLVQGLWIPKSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDT 438
Query: 586 LAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEML----NERSMRMKL 753
+A R + DWKFK P D+ FIK +P+IV+EQE W EK + E + N + +
Sbjct: 439 VAFERVSLNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSS 498
Query: 754 KPSMATKFPASGNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRH 933
+P S + + S+N MS+ETREALPK L+ +F+ K+C Q I
Sbjct: 499 RPLTTNNPATSKSLSKHASNSLNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQ 557
Query: 934 RLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSSENTTPN 1113
RLRE AV +S+RPK +R AAA G + PP EL+ +ISQVA NIHGVYV KSS
Sbjct: 558 RLREMAVSESSRPKGFAREAIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSSP----- 612
Query: 1114 PLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQ-VTSELCVSVKGNAWVL 1290
+ E+ + V ELCVS +G+AWVL
Sbjct: 613 ------------------------------------VHPEHDEFVVQELCVS-QGSAWVL 635
Query: 1291 KSGDEGAK 1314
KSGD K
Sbjct: 636 KSGDGNPK 643
>ref|NP_199764.1| SIN-like protein [Arabidopsis thaliana] gi|10177619|dbj|BAB10766.1|
unnamed protein product [Arabidopsis thaliana]
gi|332008443|gb|AED95826.1| SIN-like protein [Arabidopsis
thaliana]
Length = 689
Score = 261 bits (667), Expect = 6e-67
Identities = 159/448 (35%), Positives = 242/448 (54%), Gaps = 19/448 (4%)
Frame = +1
Query: 7 SEKTNGGPGPSRTKGNLVRPLNGPDIEVDEPWVSLEYHGVDSIFSSRFRQKMTSEESTPI 186
S+K N G + T +P+N +E WVSL+YHG+ S + SR+ M + ++ I
Sbjct: 253 SKKQNKGVQQASTDQ---KPIN------EETWVSLKYHGLQSEYCSRYLNGMMANGNSSI 303
Query: 187 QFSMNPYDYVNSLCPPTPTEDNRSKSSLRRLCMSLPLEEKFKKWFSEGDQVNRFASIKYL 366
F+M+P Y+N LC + ++ SK +L+R+ +SLPL+E+ +K EG + R++ +K+
Sbjct: 304 DFNMSPGTYINELCRGGSSRNSESKETLKRVLLSLPLKERVQKLLCEGSPLIRYSVLKHY 363
Query: 367 APYDPEEIVLQEIQKHANLVQGLWVCRTNLLPLKGAEAASRDYILCLFRKSDLI---PAK 537
AP +E L +Q++ LVQGLW +T LL L G A+RDY+L LF ++ I +
Sbjct: 364 APEFSDEDFLGALQEYGRLVQGLWTPKTRLLKLDGPVEAARDYVLSLFSQNTTIKYSEVE 423
Query: 538 ILSEYRKETVKEIMTSLAVYRDTCRDWKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMI 717
+ K ++ ++T A R +DWKFK PTDV FIK +PEIVKEQ+ W + + +
Sbjct: 424 ATGDKMKPLMERMLTEFAKERHVLKDWKFKEPTDVSFIKSYPEIVKEQDIFWTDKRENLK 483
Query: 718 EMLNER---------------SMRMKLKPSMATKFPASGNTNSGVKKSVNETSSTASMSD 852
+ + S + +KP + T G G K+ T M +
Sbjct: 484 SRITAQGGKSRADKRRNVVGTSSSVTVKPEVPTTLSDKG----GSSKNTIHRVVTQEMPE 539
Query: 853 ETREALPKVLEDIFRQDKICSLQLIRHRLREQAVEKSARPKPQSRAFRAAALGADIPPSE 1032
E ++ALPK L+ +F+ K+C + I LR+ AV S PK S AL D E
Sbjct: 540 ELKKALPKALKKVFQTHKVCRYETICQGLRDLAVSTSNNPKADSGMAVNVALAVDAYQGE 599
Query: 1033 LEPLISQVATNIHGVYVAKSS-ENTTPNPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVL 1209
LE +I+ VATNIHG YV+ SS ++ + LR++VI L + P KL KA+V A + L
Sbjct: 600 LEDVINGVATNIHGSYVSISSPDHPEYDSLREVVISLLTGSPPGTKLMKAEVFAAGRTKL 659
Query: 1210 KREMTNAEYSQVTSELCVSVKGNAWVLK 1293
+RE+TN EY +V E+C + WVL+
Sbjct: 660 EREITNNEYIKVMHEIC-ETNSSGWVLQ 686
>ref|XP_003611964.1| DNA-directed RNA polymerase III subunit RPC5 [Medicago truncatula]
gi|358344405|ref|XP_003636280.1| DNA-directed RNA
polymerase III subunit RPC5 [Medicago truncatula]
gi|355502215|gb|AES83418.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
gi|355513299|gb|AES94922.1| DNA-directed RNA polymerase
III subunit RPC5 [Medicago truncatula]
Length = 683
Score = 257 bits (657), Expect = 9e-66
Identities = 156/424 (36%), Positives = 243/424 (57%), Gaps = 23/424 (5%)
Frame = +1
Query: 100 WVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKSSLRRL 279
WV LEYHG S SSR+ Q+M + ES+PI F M+ YDY+ +LCP + + +K +R
Sbjct: 270 WVPLEYHGCKSDISSRYFQQMVTHESSPINFEMSTYDYIATLCPGV-SSNTLAKGPSKRY 328
Query: 280 CMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRTNLL 459
+SLP+E++ + EG ++RF++IK+ AP ++ +L ++K A L++G WV R++LL
Sbjct: 329 LLSLPVEKRLQTLLIEGPPLHRFSAIKHFAPECSDDELLSVLEKQAQLLRGYWVPRSSLL 388
Query: 460 -PLKGAEAASRDYILCLFRKSDLIPAKILSEYRK----ETVKEIMTSLAVYRDTCRD--- 615
P G E+ +R+YIL F KS + + L +K + A+ + +
Sbjct: 389 FPTGGIESLARNYILVRFHKSLTVKSDELRRLGGGELGNRMKHFVMQFALEKFDLKSKEN 448
Query: 616 -WKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKLKPSMATKFPASGN 792
WKFK D FIK+ P +VK+QE ++ I E ++ ++ + KLK ++
Sbjct: 449 YWKFKELPDESFIKEFPIVVKKQEEIFKILENEVNSIIGTLGGKRKLKSAI--------- 499
Query: 793 TNSGVKKSVNETSST--------------ASMSDETREALPKVLEDIFRQDKICSLQLIR 930
TNSGV ++ ++++ +MS ETR ALP L+ +F+ K+CS QLI
Sbjct: 500 TNSGVNNALFTSTNSDPRATSLGEDPPRSMTMSSETRHALPIALKKLFQTHKVCSFQLIC 559
Query: 931 HRLREQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSSENTTP 1110
LR A+ ++ PK S+ AA D+P EL+ ++ +VA +IHG YV KS++N
Sbjct: 560 QELRGLALAQTMLPKGGSKMSVDAANSLDVPQDELKAILGEVACDIHGCYVLKSAQN--- 616
Query: 1111 NPLRDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVL 1290
+P RD+VI + P+ KL+KA++ EAA+ L R++ N EY + SELCVS KG+ WVL
Sbjct: 617 DPFRDVVIDMLRGSGPNGKLKKAEILEAARRKLGRDVPNNEYIKAVSELCVS-KGSFWVL 675
Query: 1291 KSGD 1302
KSGD
Sbjct: 676 KSGD 679
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like [Glycine
max]
Length = 697
Score = 254 bits (649), Expect = 8e-65
Identities = 166/421 (39%), Positives = 240/421 (57%), Gaps = 17/421 (4%)
Frame = +1
Query: 91 DEPWVSLEYHGVDSIFSSRFRQKMTSEESTPIQFSMNPYDYVNSLCPPTPTEDNRSKSSL 270
DE WV L+YH S SSR+ Q+M ++ES+PI F+M YDYV +LCP + +N K
Sbjct: 280 DECWVPLKYHSCKSDISSRYLQQMVTQESSPINFTMRAYDYVTALCPGG-SSNNLPKGLS 338
Query: 271 RRLCMSLPLEEKFKKWFSEGDQVNRFASIKYLAPYDPEEIVLQEIQKHANLVQGLWVCRT 450
+R +SLP+EE+ KK E ++RF++IK+ AP E +L +Q+HA LV GLW ++
Sbjct: 339 KRYLLSLPVEERLKKML-EDRPLHRFSAIKHFAPEYSENELLGFLQQHAILVWGLWTAKS 397
Query: 451 NLL-PLKGAEAASRDYILCLFRKSDLIPAKILSEYRKETVKEIMTSLAVYRDTCRD---- 615
+LL P G E +RDY L LF KS + +S E V + L ++ D
Sbjct: 398 SLLYPDGGVETLARDYSLLLFSKSLKVQFSDVSIRGGELVNRVRNCLKIFGVERNDLDKS 457
Query: 616 -------WKFKVPTDVQFIKDHPEIVKEQESLWVIREKKMIEMLNERSMRMKLKPSMA-- 768
WKF+ D F K +P+IV++QE L+ EK++ + R K ++A
Sbjct: 458 TGKPNPYWKFRELPDESFKKLYPDIVEKQEELFKGLEKQLSGFSSNVGKRKIGKNAVANQ 517
Query: 769 ---TKFPASGNTNSGVKKSVNETSSTASMSDETREALPKVLEDIFRQDKICSLQLIRHRL 939
T+ S +++ V + +MS+ETR ALP L+ +F+ K+CS +LI L
Sbjct: 518 GVNTEVHKSESSDQRVTSLGRVPPAKMTMSNETRHALPIALKKLFQTHKVCSFKLICEGL 577
Query: 940 REQAVEKSARPKPQSRAFRAAALGADIPPSELEPLISQVATNIHGVYVAKSSENTTPNPL 1119
RE AV K+ K S+ AA D P +EL +IS+VA I+G YV KSS + +P
Sbjct: 578 REMAVSKAMLSKGDSKMAVDAAHSLDGPHNELMAVISEVACEINGSYVLKSSPD---DPF 634
Query: 1120 RDIVIQLFSAKEPHAKLRKADVAEAAKYVLKREMTNAEYSQVTSELCVSVKGNAWVLKSG 1299
RD+VI + P+AKL+KA++ EAA+ L RE+ + EY++V SELCVS KG+ WVLKSG
Sbjct: 635 RDVVIDMLCGSGPNAKLKKAEILEAARRKLGREVASNEYTKVMSELCVS-KGSVWVLKSG 693
Query: 1300 D 1302
D
Sbjct: 694 D 694