BLASTX nr result

ID: Papaver27_contig00012643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00012643
         (1249 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314023.1| basic helix-loop-helix family protein [Popul...    58   7e-06
gb|EXB48386.1| hypothetical protein L484_007964 [Morus notabilis]      58   1e-05

>ref|XP_002314023.1| basic helix-loop-helix family protein [Populus trichocarpa]
           gi|222850431|gb|EEE87978.1| basic helix-loop-helix
           family protein [Populus trichocarpa]
          Length = 421

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
 Frame = -3

Query: 584 MNLLFPSSSTFKNSSEGGGGGDNLQRNREASMDVNLXXXXXXXXXXXXXXFNSGLMRYRS 405
           MNLL+  SS+FK S       D   R  +  MD+N                NSGLMRYRS
Sbjct: 1   MNLLY--SSSFKYS-------DGELRKSQEFMDLN---PYHYHQQQQQIQQNSGLMRYRS 48

Query: 404 APSSLLEKLIN---GEDEGGCDNFIPPPTHSSPSEAESIFARFMSIAG----NDSSDLRE 246
           APSS+LE L+N   G D GG ++       SS  E +++ ARFMS       + S +L+E
Sbjct: 49  APSSILESLVNGTSGHDGGGIESGDYRYLRSSSPEMDTMLARFMSSCNGSGDSSSQNLQE 108

Query: 245 INEKSA 228
             E+ A
Sbjct: 109 FGERPA 114


>gb|EXB48386.1| hypothetical protein L484_007964 [Morus notabilis]
          Length = 417

 Score = 57.8 bits (138), Expect = 1e-05
 Identities = 43/101 (42%), Positives = 54/101 (53%), Gaps = 12/101 (11%)
 Frame = -3

Query: 431 NSGLMRYRSAPSSLLEKLINGEDEGGCDNFIPPPTHSSPSEAESIFARFMSIAGNDSS-- 258
           NSGLMRYRSAPSS    ++   D   C  F   P  SSP E E IFARFM+  G  SS  
Sbjct: 18  NSGLMRYRSAPSSYFTDML---DREFCQQFFNRP--SSP-ETERIFARFMNSDGGGSSNN 71

Query: 257 -------DLREIN---EKSAANNRNPPQFMEQEETIEENNV 165
                  DL+++N   E  AA  RN  Q  +Q++  + NN+
Sbjct: 72  NNTAEVEDLQKVNDNAEAEAAVLRNQQQQQQQQQQQQSNNI 112


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