BLASTX nr result

ID: Papaver27_contig00010456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010456
         (1044 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]   392   e-106
gb|EXB38456.1| hypothetical protein L484_022357 [Morus notabilis]     381   e-103
emb|CBI28334.3| unnamed protein product [Vitis vinifera]              353   9e-95
ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containi...   345   2e-92
ref|XP_004293074.1| PREDICTED: pentatricopeptide repeat-containi...   282   1e-73
ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutr...   234   3e-59
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ...   233   1e-58
ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Caps...   229   1e-57
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar...   224   6e-56
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-54
ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citr...   218   3e-54
emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]   218   4e-54
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi...   211   4e-52
ref|NP_201453.1| pentatricopeptide repeat-containing protein [Ar...   209   2e-51
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ...   208   3e-51
ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfam...   207   6e-51
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus...   207   8e-51
emb|CBI30729.3| unnamed protein product [Vitis vinifera]              206   1e-50
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   205   2e-50
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   205   3e-50

>emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
          Length = 1033

 Score =  392 bits (1008), Expect = e-106
 Identities = 198/346 (57%), Positives = 250/346 (72%), Gaps = 14/346 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            +KCKS+  L QIHA +IK+ L +H F +S+LI+ CS S     ++YA S+F+ ++ PN F
Sbjct: 14   DKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSF 73

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
            IFF LI+ F+DT N ++S++LY++ML+ L    G+EFSIPSVLKACG+  AF+EGRQ+HG
Sbjct: 74   IFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHG 133

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
            Q++KT    DPFV NSM+RMY D  +I  ARR+FD MP+RDV SWNSMIAGYLKAGEI L
Sbjct: 134  QVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIEL 193

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
            ASE+F EMPERDLVS N+MIDG  K G+CELA ++FE M  K+VV+WT MIS Y+ N   
Sbjct: 194  ASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCP 253

Query: 277  N*T--------------XXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGS 140
                                         ADLGFVEEGKW+H++V  +K + + SG IGS
Sbjct: 254  MKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNK-IELSSGFIGS 312

Query: 139  ALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            ALIDMYSKCGYI+NA  +F+SISHRRNIGDWNSM+SGLAIHGL +E
Sbjct: 313  ALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLARE 358


>gb|EXB38456.1| hypothetical protein L484_022357 [Morus notabilis]
          Length = 651

 Score =  381 bits (979), Expect = e-103
 Identities = 194/346 (56%), Positives = 245/346 (70%), Gaps = 14/346 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            EKCK++  L QIHA +IK+ L S+TF  SKL+S C  +    D+++ALS+F+ ++ PN F
Sbjct: 21   EKCKTISELRQIHAQMIKTNLVSNTFAASKLVSFCCLT---GDLDHALSVFHRIQNPNPF 77

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
            I+FTLI  F ++ N L+S+ LY+ MLT LE++ G+EFS+PSVLKACGR  AFEEG+Q+HG
Sbjct: 78   IYFTLINCFTESSNPLESVYLYAHMLTCLEDWKGIEFSLPSVLKACGRLEAFEEGQQVHG 137

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
            QI KT    DPFV+NS++RMY +   +  ARR FD MP RDV SWNS+I GYL+AGEI L
Sbjct: 138  QICKTRLLFDPFVANSVVRMYLEFGQVGFARRAFDKMPERDVISWNSLITGYLRAGEIEL 197

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
            A E+F EMPERDLVS+N+MIDG  K GKCELA EIF M  HK+V +WT MIS Y+ NH  
Sbjct: 198  ARELFDEMPERDLVSYNAMIDGYGKFGKCELAEEIFGMADHKDVKTWTSMISAYVRNHYP 257

Query: 277  N*T--------------XXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGS 140
                                         ADLGFVEEGKWIH+++   K L + +G IGS
Sbjct: 258  KKALDMFGEMLCLGVRPDAPALVSVLSAIADLGFVEEGKWIHAYISTKK-LEMKTGFIGS 316

Query: 139  ALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            ALIDMY+KCG+I+NA  +F+SISH RN+GDWNSM+SGLAIHGLG E
Sbjct: 317  ALIDMYAKCGHIENAYHVFRSISHNRNVGDWNSMISGLAIHGLGTE 362


>emb|CBI28334.3| unnamed protein product [Vitis vinifera]
          Length = 604

 Score =  353 bits (905), Expect = 9e-95
 Identities = 183/332 (55%), Positives = 236/332 (71%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           +KCKS+  L QIHA +IK+ L +H F +S+LI+ CS S     ++YA S+F+ ++ PN F
Sbjct: 14  DKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSF 73

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           IFF LI+ F+DT N ++S++LY++ML+ L    G+EFSIPSVLKACG+  AF+EGRQ+HG
Sbjct: 74  IFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHG 133

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
           Q++KT    DPFV NSM+RMY D  +I  ARR+FD MP+RDV SWNSMIAGYLKAGEI L
Sbjct: 134 QVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIEL 193

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
           ASE+F EMPERDLVS N+MIDG   +GK     E+  +    +  +   ++S        
Sbjct: 194 ASELFDEMPERDLVSCNAMIDG---YGK-----EMLSLGLRPDGPAIVSVLSA------- 238

Query: 277 N*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDN 98
                          ADLGFVEEGKW+H++V  +K + + SG IGSALIDMYSKCGYI+N
Sbjct: 239 --------------IADLGFVEEGKWLHAYVSMNK-IELSSGFIGSALIDMYSKCGYIEN 283

Query: 97  ARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           A  +F+SISHRRNIGDWNSM+SGLAIHGL +E
Sbjct: 284 AYHVFRSISHRRNIGDWNSMISGLAIHGLARE 315


>ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 616

 Score =  345 bits (884), Expect = 2e-92
 Identities = 176/337 (52%), Positives = 236/337 (70%), Gaps = 5/337 (1%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           +KCKS+  L QIHA +IK+ L +H F +S+LI+ CS S     ++YA S+F+ ++ PN F
Sbjct: 14  DKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFSRIQHPNSF 73

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           IFF LI+ F+DT N ++S++LY++ML+ L    G+EFSIPSVLKACG+  AF+EGRQ+HG
Sbjct: 74  IFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLLAFDEGRQVHG 133

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
           Q++KT    DPFV NSM+RMY D  +I  ARR+FD MP+RDV SWNSMIAGYLKAGEI L
Sbjct: 134 QVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIEL 193

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKC-----ELAREIFEMMKHKNVVSWTCMISGYM 293
           A ++F  M ++D+V+W SMI   V++ +C     +L RE+  +    +  +   ++S   
Sbjct: 194 AKKVFETMSDKDVVTWTSMISAYVQN-RCPMKALDLFREMLSLGLRPDGPAIVSVLSA-- 250

Query: 292 LNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKC 113
                               ADLGFVEEGKW+H++V  +K + + SG IGSALIDMYSKC
Sbjct: 251 -------------------IADLGFVEEGKWLHAYVSMNK-IELSSGFIGSALIDMYSKC 290

Query: 112 GYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           GYI+NA  +F+SISHRRNIGDWNSM+SGLAIHGL +E
Sbjct: 291 GYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLARE 327


>ref|XP_004293074.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Fragaria vesca subsp. vesca]
          Length = 566

 Score =  282 bits (722), Expect = 1e-73
 Identities = 138/277 (49%), Positives = 195/277 (70%), Gaps = 14/277 (5%)
 Frame = -3

Query: 790 ADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHGQIMKTDFQC 611
           +++   L+++L Y++ML++L+    +EF +P++LKAC +S A EEGRQ+HGQI+K+    
Sbjct: 2   SESSTPLEALLFYAQMLSSLKNLDRVEFLLPALLKACSKSRALEEGRQVHGQIVKSQMLF 61

Query: 610 DPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGLASEMFREMP 431
           DP+V+N+++RMY +L  I  ++R+FD +P RD  SWNS+I GYL+ GEI LA  +F E+P
Sbjct: 62  DPYVANALIRMYSELGCIGLSQRVFDKIPERDQVSWNSLITGYLRVGEIELAQGIFNEIP 121

Query: 430 ERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXRN*T------ 269
           ERD+VS N+MIDG VK GKCELA E+F  M+HK+VV+WT MISGY+ N            
Sbjct: 122 ERDMVSCNAMIDGYVKSGKCELAEEVFMTMQHKDVVTWTTMISGYVFNDRPKEALGLFRE 181

Query: 268 --------XXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKC 113
                               ADLGFVEEGKW+H+++  +K +S+ SG IGSA++DMY+KC
Sbjct: 182 MLSQGIRPDAPALVSVLSAIADLGFVEEGKWVHTYIRLNK-ISLSSGFIGSAIVDMYAKC 240

Query: 112 GYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           G+I+NA ++F+ I H RNIGDWN M+SGLA+HGLG E
Sbjct: 241 GHIENAYNVFEIICHCRNIGDWNCMISGLAMHGLGHE 277


>ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutrema salsugineum]
            gi|557115218|gb|ESQ55501.1| hypothetical protein
            EUTSA_v10024877mg [Eutrema salsugineum]
          Length = 535

 Score =  234 bits (598), Expect = 3e-59
 Identities = 131/347 (37%), Positives = 199/347 (57%), Gaps = 15/347 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            E+ KS+  + Q HA ++K+GL   TF  SKLI+    +  P  ++YA SI N +E PN F
Sbjct: 17   ERAKSLSEIQQAHAFMLKTGLFRDTFSASKLIAFAVVNPEPKTVSYAHSILNRIESPNAF 76

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
               ++IRA+A++     ++  + +ML  L      ++S   VLKAC   C FEEGRQIHG
Sbjct: 77   THNSVIRAYANSSAPESALTAFREML--LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 134

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
              +K+D   D FV N+++ +Y        AR++ DTMP RDV SWNS+++ Y++ G +  
Sbjct: 135  LFLKSDLISDVFVENTLVNVYGRSGYFEIARKVLDTMPERDVVSWNSLLSAYVEKGLVEE 194

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGY------ 296
            A  +F EM ER++ SWN MI G    G    A+E+F+ M  K+VVSW  M+S Y      
Sbjct: 195  ARGVFDEMDERNVESWNFMISGYAAAGLVNEAKELFDSMPVKDVVSWNAMVSAYAHVGCY 254

Query: 295  ---------MLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIG 143
                     MLN                  A+LG + +G+W+H +  +   + ID G + 
Sbjct: 255  SEVLEVFNEMLNSSTEKPDGFTLVNVLSACANLGSLSQGEWVHVYTDKHG-IEID-GFLA 312

Query: 142  SALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            +AL+DMYSKCG +D A ++F++ S ++++  WNSM+SGL++HGLG +
Sbjct: 313  TALVDMYSKCGKVDKALEVFRATS-KKDVSTWNSMISGLSVHGLGND 358



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 4/180 (2%)
 Frame = -3

Query: 868 MNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVL 689
           +N A  +F+S+   +   +  ++ A+A      + + ++++ML +  E     F++ +VL
Sbjct: 223 VNEAKELFDSMPVKDVVSWNAMVSAYAHVGCYSEVLEVFNEMLNSSTEKPD-GFTLVNVL 281

Query: 688 KACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVY 509
            AC    +  +G  +H    K   + D F++ +++ MY     +  A  +F     +DV 
Sbjct: 282 SACANLGSLSQGEWVHVYTDKHGIEIDGFLATALVDMYSKCGKVDKALEVFRATSKKDVS 341

Query: 508 SWNSMIAGYLKAGEIGLASEMFREMPER----DLVSWNSMIDGLVKHGKCELAREIFEMM 341
           +WNSMI+G    G    A E+F EM       + +++ + +      G  + AR +FE M
Sbjct: 342 TWNSMISGLSVHGLGNDALEIFSEMVHEGFKPNSITFIATLSACNHVGMLDQARRLFETM 401


>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313808|gb|EFH44231.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 535

 Score =  233 bits (593), Expect = 1e-58
 Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 15/347 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            E+ KS+  + Q HA ++K+GL   TF  SKL++  + +  P  ++YA SI N +E PN F
Sbjct: 17   ERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIESPNGF 76

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
               ++IRA+A++     ++ ++ +ML  L      ++S   VLKAC   C FEEGRQIHG
Sbjct: 77   THNSVIRAYANSSTPEIALTVFREML--LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 134

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
              MK+D   D FV N+++ +Y        AR++ D MP RD  SWNS+++ YL  G +  
Sbjct: 135  LFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEE 194

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGY------ 296
            A  +F EM ER++ SWN MI G    G  + ARE+F+ M  K+VVSW  M++ Y      
Sbjct: 195  ARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCY 254

Query: 295  ---------MLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIG 143
                     ML+                  A LG + +G+W+H ++ +   + I+ G + 
Sbjct: 255  NEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHG-IEIE-GFVA 312

Query: 142  SALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            +AL+DMYSKCG ID A ++F+  S +R++  WNS+++GL++HGLGK+
Sbjct: 313  TALVDMYSKCGKIDKALEVFRDTS-KRDVSTWNSIITGLSVHGLGKD 358


>ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Capsella rubella]
            gi|482552205|gb|EOA16398.1| hypothetical protein
            CARUB_v10004552mg [Capsella rubella]
          Length = 537

 Score =  229 bits (584), Expect = 1e-57
 Identities = 128/347 (36%), Positives = 199/347 (57%), Gaps = 15/347 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            E+ KS+  + Q HA ++K+GL+  T+  SKLI+    +  P  ++YA SI N +E PN F
Sbjct: 19   ERAKSLSEIQQAHAFMLKTGLSQDTYSASKLIAFAVTNPEPKTVSYAHSILNRIESPNGF 78

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
               ++IRA+A++     +++++  ML  L      ++S   VLKAC     FEEGRQIHG
Sbjct: 79   THNSVIRAYANSSTPEMALVVFRDML--LGPVFPDKYSFTFVLKACAAFSGFEEGRQIHG 136

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
              MK+    D FV N+++ +Y        AR++ D MP RD  SWNS+++ YL+ G +  
Sbjct: 137  LFMKSGLMTDVFVENTLVNVYGRSGYFEIARKVLDKMPVRDAVSWNSLLSAYLEKGLVEE 196

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGY------ 296
            A  +F EM ER++ SWN MI G    G  + A+EIF+ M  K+VVSW  M++ Y      
Sbjct: 197  ARALFDEMEERNVESWNFMISGYAAAGLVKEAKEIFDSMPVKDVVSWNAMVTAYAHVGCY 256

Query: 295  ---------MLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIG 143
                     ML+                  A LG + +G+W+H ++ +   + I+ G + 
Sbjct: 257  NEVLEVFNEMLDDSTEKPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHG-IEIE-GFLA 314

Query: 142  SALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            +AL+DMYSKCG ID A ++F++ S +R++  WNS++SGL++HGLGK+
Sbjct: 315  TALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISGLSVHGLGKD 360



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 10/195 (5%)
 Frame = -3

Query: 859 ALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLT-TLEEFHGLEFSIPSVLKA 683
           A  IF+S+   +   +  ++ A+A      + + ++++ML  + E+  G  F++ +VL A
Sbjct: 228 AKEIFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNEMLDDSTEKPDG--FTLVNVLSA 285

Query: 682 CGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSW 503
           C    +  +G  +H  I K   + + F++ +++ MY     I  A  +F     RDV +W
Sbjct: 286 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 345

Query: 502 NSMIAGYLKAGEIGLASEMFREMPERDL----VSWNSMIDGLVKHGKCELAREIFEMMK- 338
           NS+I+G    G    A E+F EM         +++  ++      G  + AR +FEMM  
Sbjct: 346 NSIISGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARRLFEMMNS 405

Query: 337 ----HKNVVSWTCMI 305
                  V  + CM+
Sbjct: 406 VYGIEPTVEHYGCMV 420


>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75098703|sp|O49399.2|PP321_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g18840 gi|5738365|emb|CAA16741.2| putative protein
            [Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
            putative protein [Arabidopsis thaliana]
            gi|332658697|gb|AEE84097.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 545

 Score =  224 bits (570), Expect = 6e-56
 Identities = 124/347 (35%), Positives = 198/347 (57%), Gaps = 15/347 (4%)
 Frame = -3

Query: 997  EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
            E+ KS+  + Q HA ++K+GL   TF  SKL++  + +  P  ++YA SI N +  PN F
Sbjct: 47   ERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGF 106

Query: 817  IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
               ++IRA+A++     ++ ++ +ML  L      ++S   VLKAC   C FEEGRQIHG
Sbjct: 107  THNSVIRAYANSSTPEVALTVFREML--LGPVFPDKYSFTFVLKACAAFCGFEEGRQIHG 164

Query: 637  QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
              +K+    D FV N+++ +Y        AR++ D MP RD  SWNS+++ YL+ G +  
Sbjct: 165  LFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDE 224

Query: 457  ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGY------ 296
            A  +F EM ER++ SWN MI G    G  + A+E+F+ M  ++VVSW  M++ Y      
Sbjct: 225  ARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCY 284

Query: 295  ---------MLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIG 143
                     ML+                  A LG + +G+W+H ++ +   + I+ G + 
Sbjct: 285  NEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG-IEIE-GFLA 342

Query: 142  SALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            +AL+DMYSKCG ID A ++F++ S +R++  WNS++S L++HGLGK+
Sbjct: 343  TALVDMYSKCGKIDKALEVFRATS-KRDVSTWNSIISDLSVHGLGKD 388



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
 Frame = -3

Query: 859 ALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLT-TLEEFHGLEFSIPSVLKA 683
           A  +F+S+   +   +  ++ A+A      + + +++KML  + E+  G  F++ SVL A
Sbjct: 256 AKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG--FTLVSVLSA 313

Query: 682 CGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSW 503
           C    +  +G  +H  I K   + + F++ +++ MY     I  A  +F     RDV +W
Sbjct: 314 CASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTW 373

Query: 502 NSMIAGYLKAGEIGLASEMFREMPERDL----VSWNSMIDGLVKHGKCELAREIFEMM 341
           NS+I+     G    A E+F EM         +++  ++      G  + AR++FEMM
Sbjct: 374 NSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431


>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  218 bits (556), Expect = 3e-54
 Identities = 123/335 (36%), Positives = 196/335 (58%), Gaps = 3/335 (0%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           ++C +M  L QIH  ++K+GL       SKL++ C++  S S + YA ++F+ +  PN F
Sbjct: 26  QRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGS-LAYARTVFDRIFRPNTF 84

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLE---FSIPSVLKACGRSCAFEEGRQ 647
           ++ T+IR ++++    +++LLY  ML     +H +    ++ P +LKAC    A EE +Q
Sbjct: 85  MWNTMIRGYSNSKEPEEALLLYHHML-----YHSVPHNAYTFPFLLKACSSMSALEETQQ 139

Query: 646 IHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGE 467
           IH  I+K  F  + + +NS+L +Y    DI+SAR LFD +  RD  SWNSMI GY K GE
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199

Query: 466 IGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLN 287
           I +A E+F  MPER+++SW SMI G V  GK + A  +F  M+           +G  L+
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ----------TAGIKLD 249

Query: 286 HXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGY 107
           +                 ADLG +++GKWIH+++ + + + ID  ++G  LIDMY+KCG 
Sbjct: 250 N-------VALVSTLQACADLGVLDQGKWIHAYIKKHE-IEIDP-ILGCVLIDMYAKCGD 300

Query: 106 IDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           ++ A ++F+ +   + +  W +M+SG AIHG G+E
Sbjct: 301 LEEAIEVFRKM-EEKGVSVWTAMISGYAIHGRGRE 334



 Score = 71.6 bits (174), Expect = 5e-10
 Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 40/269 (14%)
 Frame = -3

Query: 991 CKSMPVLH---QIHASVIKSGLTSHTFLMSKLISICSNS--------------------- 884
           C SM  L    QIHA +IK G  S  +  + L+++ S S                     
Sbjct: 128 CSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187

Query: 883 -------RSPSDMNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEE 725
                      ++  A  IFN + E N   + ++I          +++ L+ +M T   +
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247

Query: 724 FHGLEFSIPSVLKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSAR 545
              +  ++ S L+AC      ++G+ IH  I K + + DP +   ++ MY    D+  A 
Sbjct: 248 LDNV--ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 544 RLFDTMPHRDVYSWNSMIAGYLKAGEIGLASEMFREMP----ERDLVSWNSMIDGLVKHG 377
            +F  M  + V  W +MI+GY   G    A E F +M     E + +++  ++      G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 376 KCELAREIFEMMKH-----KNVVSWTCMI 305
               A+ +FE M+       ++  + CM+
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMV 394


>ref|XP_006425654.1| hypothetical protein CICLE_v10025166mg [Citrus clementina]
           gi|568824869|ref|XP_006466814.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Citrus sinensis]
           gi|557527644|gb|ESR38894.1| hypothetical protein
           CICLE_v10025166mg [Citrus clementina]
          Length = 622

 Score =  218 bits (555), Expect = 3e-54
 Identities = 127/336 (37%), Positives = 194/336 (57%), Gaps = 5/336 (1%)
 Frame = -3

Query: 994 KCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFFI 815
           +C  M  L QIHA + K GLT +T L+S+L++ C+ S S S + YA  +F+ + +PN F+
Sbjct: 27  RCSYMEELKQIHAQMFKKGLTVNTILVSRLLAFCTFSNSGS-LAYAQMVFDRIIKPNTFM 85

Query: 814 FFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHGQ 635
           + T++R +AD+    Q++LLY +ML+     +   F  P +LKAC R  A EE +QIH Q
Sbjct: 86  WNTMVRGYADSSEPEQALLLYRQMLSHSVSHNAYTF--PFLLKACSRLSALEETQQIHAQ 143

Query: 634 IMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGLA 455
           I+K  F  + F +NS+L  Y     I+SAR +FD MP RD  SWNSMI GY K GE+ LA
Sbjct: 144 IIKFGFSSEVFATNSLLHAYAISGSIKSARLIFDHMPQRDTVSWNSMIDGYTKCGEMELA 203

Query: 454 SEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNV----VSWTCMISGYMLN 287
            E F++M E++++SW ++I G V  G  + A  +F  M+   V    V+    +S     
Sbjct: 204 CEFFKDMKEKNVISWTTLISGYVGAGMDKEALHLFHEMQTAGVKPDNVALVSAVSA---- 259

Query: 286 HXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSID-SGVIGSALIDMYSKCG 110
                             A LG +++G+WI  ++   K L I    ++G ALIDMY+KCG
Sbjct: 260 -----------------CAHLGALDQGRWIDEYI---KHLGIKIDPILGCALIDMYAKCG 299

Query: 109 YIDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            ++ A ++FK +  ++ +  W +++ GLAIHG G+E
Sbjct: 300 DLEEALELFKRM-EKKGVSAWTAIIFGLAIHGHGRE 334



 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 37/258 (14%)
 Frame = -3

Query: 967 QIHASVIKSGLTSHTFLMSKLI----------------------------SICSNSRSPS 872
           QIHA +IK G +S  F  + L+                            S+        
Sbjct: 139 QIHAQIIKFGFSSEVFATNSLLHAYAISGSIKSARLIFDHMPQRDTVSWNSMIDGYTKCG 198

Query: 871 DMNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSV 692
           +M  A   F  ++E N   + TLI  +       +++ L+ +M T   +   +  ++ S 
Sbjct: 199 EMELACEFFKDMKEKNVISWTTLISGYVGAGMDKEALHLFHEMQTAGVKPDNV--ALVSA 256

Query: 691 LKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDV 512
           + AC    A ++GR I   I     + DP +  +++ MY    D+  A  LF  M  + V
Sbjct: 257 VSACAHLGALDQGRWIDEYIKHLGIKIDPILGCALIDMYAKCGDLEEALELFKRMEKKGV 316

Query: 511 YSWNSMIAGYLKAGEIGLASEMFREM----PERDLVSWNSMIDGLVKHGKCELAREIFEM 344
            +W ++I G    G    A   F +M     + +LV++ +++      G  +  + +FE 
Sbjct: 317 SAWTAIIFGLAIHGHGREALNWFSKMQVARTKPNLVTFTAILTACSYAGLVDEGKSLFES 376

Query: 343 MKHK-----NVVSWTCMI 305
           M+ K      +  + CM+
Sbjct: 377 MERKYNLKPTIEHYGCMV 394


>emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  218 bits (554), Expect = 4e-54
 Identities = 123/335 (36%), Positives = 196/335 (58%), Gaps = 3/335 (0%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           ++C +M  L QIH  ++K+GL       SKL++ C++  S S + YA ++F+ +  PN F
Sbjct: 26  QRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGS-LAYARTVFDRIFRPNTF 84

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLE---FSIPSVLKACGRSCAFEEGRQ 647
           ++ T+IR ++++    +++LLY  ML     +H +    ++ P +LKAC    A EE +Q
Sbjct: 85  MWNTMIRGYSNSKEPEEALLLYHHML-----YHSVPHNAYTFPFLLKACSSMSASEETQQ 139

Query: 646 IHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGE 467
           IH  I+K  F  + + +NS+L +Y    DI+SAR LFD +  RD  SWNSMI GY K GE
Sbjct: 140 IHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGE 199

Query: 466 IGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLN 287
           I +A E+F  MPER+++SW SMI G V  GK + A  +F  M+           +G  L+
Sbjct: 200 IEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQ----------TAGIKLD 249

Query: 286 HXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGY 107
           +                 ADLG +++GKWIH+++ + + + ID  ++G  LIDMY+KCG 
Sbjct: 250 N-------VALVSTLQACADLGVLDQGKWIHAYIKKHE-IEIDP-ILGCVLIDMYAKCGD 300

Query: 106 IDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           ++ A ++F+ +   + +  W +M+SG AIHG G+E
Sbjct: 301 LEEAIEVFRKM-EEKGVSVWTAMISGYAIHGRGRE 334



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 40/269 (14%)
 Frame = -3

Query: 991 CKSMPV---LHQIHASVIKSGLTSHTFLMSKLISICSNS--------------------- 884
           C SM       QIHA +IK G  S  +  + L+++ S S                     
Sbjct: 128 CSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187

Query: 883 -------RSPSDMNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEE 725
                      ++  A  IFN + E N   + ++I          +++ L+ +M T   +
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247

Query: 724 FHGLEFSIPSVLKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSAR 545
              +  ++ S L+AC      ++G+ IH  I K + + DP +   ++ MY    D+  A 
Sbjct: 248 LDNV--ALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 544 RLFDTMPHRDVYSWNSMIAGYLKAGEIGLASEMFREMP----ERDLVSWNSMIDGLVKHG 377
            +F  M  + V  W +MI+GY   G    A E F +M     E + +++  ++      G
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 376 KCELAREIFEMMKH-----KNVVSWTCMI 305
               A+ +FE M+       ++  + CM+
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMV 394


>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  211 bits (537), Expect = 4e-52
 Identities = 115/331 (34%), Positives = 189/331 (57%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           + C +M  L Q H+ +I+ GL++    M ++I  C+ S+S  D+NYAL +F+ +  P+ +
Sbjct: 28  DSCSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKS-GDLNYALEVFDKIPHPDAY 86

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           I+ T+ R +     +   I +YS+ML   +     +F+ P +++AC    A EEG+QIH 
Sbjct: 87  IYNTIFRGYLRWQLARNCIFMYSRMLH--KSVSPNKFTYPPLIRACCIDYAIEEGKQIHA 144

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
            ++K  F  D F  N+++ MY + + +  ARR+FD MP RDV SW S+I GY + G +  
Sbjct: 145 HVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDK 204

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
           A E+F  MPER+ VSWN+MI   V+  +   A  +F+ M+ +NVV     ++  ML+   
Sbjct: 205 AREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVV-LDKFVAASMLS--- 260

Query: 277 N*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDN 98
                            LG +E+GKWIH ++ +S  + +DS  + + +IDMY KCG ++ 
Sbjct: 261 -------------ACTGLGALEQGKWIHGYIEKSG-IELDS-KLATTVIDMYCKCGCLEK 305

Query: 97  ARDIFKSISHRRNIGDWNSMLSGLAIHGLGK 5
           A ++F  +  ++ I  WN M+ GLA+HG G+
Sbjct: 306 ASEVFNELP-QKGISSWNCMIGGLAMHGKGE 335



 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 81/347 (23%), Positives = 140/347 (40%), Gaps = 29/347 (8%)
 Frame = -3

Query: 967  QIHASVIKSGLTSHTFLMSKLISICSNSRSPSD--------------------------- 869
            QIHA V+K G  +  F ++ LI +  N +S                              
Sbjct: 141  QIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWG 200

Query: 868  -MNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSV 692
             ++ A  +F  + E N   +  +I A+  +    ++  L+ +M   LE     +F   S+
Sbjct: 201  FVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRM--RLENVVLDKFVAASM 258

Query: 691  LKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDV 512
            L AC    A E+G+ IHG I K+  + D  ++ +++ MY     +  A  +F+ +P + +
Sbjct: 259  LSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGI 318

Query: 511  YSWNSMIAGYLKAGEIGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHK 332
             SWN MI G    G+   A E+F+EM ER++V+     DG+                   
Sbjct: 319  SSWNCMIGGLAMHGKGEAAIELFKEM-EREMVA----PDGIT----------------FV 357

Query: 331  NVVSWTCMISGYMLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSG 152
            NV+S  C  S                          G VEEGK  H F   ++ L +  G
Sbjct: 358  NVLS-ACAHS--------------------------GLVEEGK--HYFQYMTEVLGLKPG 388

Query: 151  VIG-SALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIHG 14
            +     ++D+  + G ++ AR +   +    + G   +++    IHG
Sbjct: 389  MEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHG 435


>ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g66520 gi|10177533|dbj|BAB10928.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332010841|gb|AED98224.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 620

 Score =  209 bits (532), Expect = 2e-51
 Identities = 114/332 (34%), Positives = 194/332 (58%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           ++C     L QIHA ++K+GL   ++ ++K +S C +S S   + YA  +F+  + P+ F
Sbjct: 22  QRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTF 81

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           ++  +IR F+ +    +S+LLY +ML +    +   F  PS+LKAC    AFEE  QIH 
Sbjct: 82  LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTF--PSLLKACSNLSAFEETTQIHA 139

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
           QI K  ++ D +  NS++  Y    + + A  LFD +P  D  SWNS+I GY+KAG++ +
Sbjct: 140 QITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDI 199

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
           A  +FR+M E++ +SW +MI G V+    + A ++F  M++ +V      ++  +     
Sbjct: 200 ALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANAL----- 254

Query: 277 N*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDN 98
                          A LG +E+GKWIHS++ +++ + +DS V+G  LIDMY+KCG ++ 
Sbjct: 255 ------------SACAQLGALEQGKWIHSYLNKTR-IRMDS-VLGCVLIDMYAKCGEMEE 300

Query: 97  ARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           A ++FK+I  ++++  W +++SG A HG G+E
Sbjct: 301 ALEVFKNIK-KKSVQAWTALISGYAYHGHGRE 331



 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 70/345 (20%), Positives = 132/345 (38%), Gaps = 28/345 (8%)
 Frame = -3

Query: 967  QIHASVIKSGLTSHTFLMSKLIS---ICSNSR----------SPSD-------------- 869
            QIHA + K G  +  + ++ LI+   +  N +           P D              
Sbjct: 136  QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAG 195

Query: 868  -MNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSV 692
             M+ AL++F  + E N   + T+I  +     + +++ L+ +M  +  E   +  S+ + 
Sbjct: 196  KMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNV--SLANA 253

Query: 691  LKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDV 512
            L AC +  A E+G+ IH  + KT  + D  +   ++ MY    ++  A  +F  +  + V
Sbjct: 254  LSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSV 313

Query: 511  YSWNSMIAGYLKAGEIGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHK 332
             +W ++I+GY   G    A   F EM +  +                             
Sbjct: 314  QAWTALISGYAYHGHGREAISKFMEMQKMGI---------------------------KP 346

Query: 331  NVVSWTCMISGYMLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSG 152
            NV+++T +++                          G VEEGK I   + R   L     
Sbjct: 347  NVITFTAVLTACSYT---------------------GLVEEGKLIFYSMERDYNLKPTIE 385

Query: 151  VIGSALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIH 17
              G  ++D+  + G +D A+   + +  + N   W ++L    IH
Sbjct: 386  HYG-CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 429


>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312591|gb|EFH43015.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 649

 Score =  208 bits (529), Expect = 3e-51
 Identities = 115/331 (34%), Positives = 190/331 (57%)
 Frame = -3

Query: 994 KCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFFI 815
           +C     L QIHA ++K+GL   ++ ++K +S C +S S   + YA  +F+  + P+ F+
Sbjct: 52  RCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRPDTFL 111

Query: 814 FFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHGQ 635
           +  +IR F+ +    +S+LLY +ML      +   F  PS+LKAC    A EE  QIH Q
Sbjct: 112 WNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTF--PSLLKACSNLSALEETTQIHAQ 169

Query: 634 IMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGLA 455
           I K  ++ D +  NS++  Y    + + A  LFD +P  D  SWNS+I GY KAG++ +A
Sbjct: 170 ITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMDIA 229

Query: 454 SEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXRN 275
             +FR+M E++ +SW +MI G V+ G  + A ++F  M++ +V      ++  +      
Sbjct: 230 LTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANAL------ 283

Query: 274 *TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDNA 95
                         A LG +E+GKWIHS++ +++ + +DS V+G  LIDMY+KCG +  A
Sbjct: 284 -----------SACAQLGALEQGKWIHSYLTKTR-IRMDS-VLGCVLIDMYAKCGDMGEA 330

Query: 94  RDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
            ++FK+I  R+++  W +++SG A HG G+E
Sbjct: 331 LEVFKNI-QRKSVQAWTALISGYAYHGHGRE 360



 Score = 70.9 bits (172), Expect = 8e-10
 Identities = 72/356 (20%), Positives = 132/356 (37%), Gaps = 31/356 (8%)
 Frame = -3

Query: 991  CKSMPVLH---QIHASVIKSGLTSHTFLMSKLI--------------------------- 902
            C ++  L    QIHA + K G  +  + ++ LI                           
Sbjct: 154  CSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSW 213

Query: 901  -SICSNSRSPSDMNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEE 725
             S+         M+ AL++F  + E N   + T+I  +       +++ L+ +M  +  E
Sbjct: 214  NSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVE 273

Query: 724  FHGLEFSIPSVLKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSAR 545
               +  S+ + L AC +  A E+G+ IH  + KT  + D  +   ++ MY    D+  A 
Sbjct: 274  PDNV--SLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEAL 331

Query: 544  RLFDTMPHRDVYSWNSMIAGYLKAGEIGLASEMFREMPERDLVSWNSMIDGLVKHGKCEL 365
             +F  +  + V +W ++I+GY   G    A   F EM +  +                  
Sbjct: 332  EVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI------------------ 373

Query: 364  AREIFEMMKHKNVVSWTCMISGYMLNHXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFV 185
                       NV+++T +++                          G VEEGK I   +
Sbjct: 374  ---------KPNVITFTTVLTACSYT---------------------GLVEEGKLIFYNM 403

Query: 184  CRSKFLSIDSGVIGSALIDMYSKCGYIDNARDIFKSISHRRNIGDWNSMLSGLAIH 17
             R   L       G  ++D+ S+ G +D A+   + +  + N   W ++L    IH
Sbjct: 404  ERDYNLKPTIEHYG-CVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIH 458


>ref|XP_007046897.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508699158|gb|EOX91054.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 529

 Score =  207 bits (527), Expect = 6e-51
 Identities = 111/332 (33%), Positives = 190/332 (57%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           E+C  M  L QIHA + K+GL + T  +S++++ C + +   ++ YA  +F+ V  PN F
Sbjct: 26  ERCSRMEELKQIHAQMFKTGLVADTITVSRILTFCVSPKY-GNLEYAQMVFDRVSRPNTF 84

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           ++ T+IR +++     ++ LLY +ML      +   F  P +LKAC    A EE +QIH 
Sbjct: 85  MYNTMIRGYSNNKEPEKAFLLYQQMLCHSVPHNSYTF--PFLLKACSSLLAIEETKQIHA 142

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
            ++K  F  + F +NS+L +Y     I++AR LFD +P RD+ SWNSMI  Y K G++ +
Sbjct: 143 HVIKLGFGSEVFATNSLLHVYATSGSIKAARLLFDLVPERDIVSWNSMIGCYTKCGKMEI 202

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXR 278
           A E F++MP ++++SW +MI G V  G  + A  +F  M+ + V      ++  +     
Sbjct: 203 AYEFFKDMPTKNVISWTTMISGYVGAGMYKEALNLFHEMQIEGVKPDNVALASTL----- 257

Query: 277 N*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDN 98
                          + LG +++G+WIH+++ R   + ID  ++G  LIDM++KCG ++ 
Sbjct: 258 ------------SACSHLGALDQGRWIHAYIDRIG-VEIDP-ILGCVLIDMFAKCGDMEE 303

Query: 97  ARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           A ++F+ +  ++ +  W +++SG AIHG GKE
Sbjct: 304 ALEVFRKVK-KKEVSLWTAVISGFAIHGRGKE 334


>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
          Length = 505

 Score =  207 bits (526), Expect = 8e-51
 Identities = 123/334 (36%), Positives = 197/334 (58%), Gaps = 4/334 (1%)
 Frame = -3

Query: 991 CKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFFIF 812
           C ++  L +IHA +IK+GL   T  +S++++ C+      D++YA S+F+ +E+PN F +
Sbjct: 15  CHTIKDLTKIHAQLIKTGLAKDTIAVSRILAFCAAPGPARDLDYAFSVFSHIEKPNLFTW 74

Query: 811 FTLIRAFADTPNSLQSILLYSKMLT--TLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
            T+IR F  + +   +I L+  MLT  TLE  +    + PSV KA  +     +G Q+HG
Sbjct: 75  NTIIRGFCQSSHPHVAISLFVDMLTNSTLEPEN---LTYPSVFKAYTQLGLAGDGAQLHG 131

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
           +I+K  F+ DPF+ NS++ MY D     SAR+LFD     DV +WNSM+ G  K GE+  
Sbjct: 132 RIIKLGFEHDPFIRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLAKCGEVDE 191

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNV-VSWTCMISGYMLNHX 281
           +  +F ++P R+ +SWN+MI G V++GK   A  +F  M+ + +  S   ++S  MLN  
Sbjct: 192 SWRLFCKIPCRNDISWNTMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLVS--MLN-- 247

Query: 280 RN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSID-SGVIGSALIDMYSKCGYI 104
                           A LG +E+GKWIH ++ +S   +ID + ++ +A+IDMY KCG I
Sbjct: 248 --------------ACAKLGALEQGKWIHRYIKKSDINNIDRNTIVVTAIIDMYCKCGDI 293

Query: 103 DNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
             AR++F+S + ++ +  WNSM+ GLA +G  +E
Sbjct: 294 KTAREVFES-TPQKALSGWNSMILGLATNGFEEE 326


>emb|CBI30729.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  206 bits (525), Expect = 1e-50
 Identities = 119/334 (35%), Positives = 191/334 (57%), Gaps = 3/334 (0%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           E   S+  LHQ HA ++KSGL   TF  S+LI+  S +     + YA SIF+ +  PN +
Sbjct: 15  EMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSY 74

Query: 817 IFFTLIRAFADTPNSLQSILLYSKML--TTLEEFHGLEFSIPSVLKACGRSCAFEEGRQI 644
           ++ T+IRA+A++P    ++ ++ +ML  + L + +   F+    LK+CG     EEGRQI
Sbjct: 75  MWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFA----LKSCGSFSGVEEGRQI 130

Query: 643 HGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEI 464
           HG ++KT    D F+ N+++ +Y     I  AR L D M  RDV SWN++++ Y + G +
Sbjct: 131 HGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLM 190

Query: 463 GLAS-EMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLN 287
            LAS  +F E P +++VSWN+MI G    G+      +FE M+H  V    C +   +  
Sbjct: 191 ELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVL-- 248

Query: 286 HXRN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGY 107
                             A +G + +G+W+H+++ ++  +SID G + +AL+DMYSKCG 
Sbjct: 249 ---------------SACAHVGALSQGEWVHAYIDKNG-ISID-GFVATALVDMYSKCGS 291

Query: 106 IDNARDIFKSISHRRNIGDWNSMLSGLAIHGLGK 5
           I+ A ++F S   R++I  WNS++SGL+ HG G+
Sbjct: 292 IEKALEVFNSCL-RKDISTWNSIISGLSTHGSGQ 324



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 60/261 (22%), Positives = 116/261 (44%), Gaps = 34/261 (13%)
 Frame = -3

Query: 967 QIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYAL------------SIFNSVEEPN 824
           QIH  V+K+GL    F+ + LI + ++     D  + L            ++ ++  E  
Sbjct: 129 QIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERG 188

Query: 823 FFIFFTLIRAFADTPNSLQSILLYSKMLT----------TLEEFHGLEFS--------IP 698
                +  R F +TP  +++++ ++ M+T           L  F  ++ +        + 
Sbjct: 189 LMELASR-RVFGETP--VKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLV 245

Query: 697 SVLKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHR 518
           SVL AC    A  +G  +H  I K     D FV+ +++ MY     I  A  +F++   +
Sbjct: 246 SVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRK 305

Query: 517 DVYSWNSMIAGYLKAGE----IGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIF 350
           D+ +WNS+I+G    G     + + SEM  E  + + V++  ++    + G  +  RE+F
Sbjct: 306 DISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMF 365

Query: 349 EMMKHKNVVSWTCMISGYMLN 287
            +M H + +  T    G M++
Sbjct: 366 NLMVHVHGIQPTIEHYGCMVD 386


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  205 bits (522), Expect = 2e-50
 Identities = 118/334 (35%), Positives = 191/334 (57%), Gaps = 2/334 (0%)
 Frame = -3

Query: 997 EKCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFF 818
           ++C +M  L +IHA +IK+GL SHT   S+L++ C++     ++NYAL +F+ ++ PN F
Sbjct: 34  KRCATMSDLRKIHAHLIKTGLISHTIASSRLLAFCASPAG--NINYALMVFSQIQNPNLF 91

Query: 817 IFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHG 638
           I+ T+IR F+ +     +I L+  ML           + PSV KA  +      G Q+HG
Sbjct: 92  IWNTIIRGFSRSSTPQTAIFLFIDMLVG-SPLEPQRLTYPSVFKAYAQLGLACFGAQLHG 150

Query: 637 QIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGL 458
           +++K    CD FV N+++ MY +   +  AR+LFD     D+ +WNSMI G  K GE+G 
Sbjct: 151 RVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLSKCGEVGE 210

Query: 457 ASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNV-VSWTCMISGYMLNHX 281
           +  +F  MP R+ VSWNSMI G V++GKC  A E+F  M+ + +  S   M+S  +LN  
Sbjct: 211 SRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQGEGIKASEFTMVS--LLN-- 266

Query: 280 RN*TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKF-LSIDSGVIGSALIDMYSKCGYI 104
                             LG + +G+WIH ++ ++   L++   ++ +A+IDMY KCG +
Sbjct: 267 --------------ASGRLGAIRQGEWIHEYITKNGIELNV---IVVTAIIDMYCKCGSV 309

Query: 103 DNARDIFKSISHRRNIGDWNSMLSGLAIHGLGKE 2
           + A  +FK+ + +  +  WNSM+ GLA++G  +E
Sbjct: 310 NKALSVFKT-APKLGLSCWNSMVMGLAMNGCEEE 342



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 60/259 (23%), Positives = 106/259 (40%), Gaps = 38/259 (14%)
 Frame = -3

Query: 967 QIHASVIKSGLTSHTFLMSKLISI------CSNSRSPSDMNYALSI-------------- 848
           Q+H  VIK GL    F+ + +I +       S +R   D +  L +              
Sbjct: 147 QLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLSKCG 206

Query: 847 --------FNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSV 692
                   F+ +   N   + ++I  +      ++++ L+ KM    E     EF++ S+
Sbjct: 207 EVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQG--EGIKASEFTMVSL 264

Query: 691 LKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDV 512
           L A GR  A  +G  IH  I K   + +  V  +++ MY     +  A  +F T P   +
Sbjct: 265 LNASGRLGAIRQGEWIHEYITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPKLGL 324

Query: 511 YSWNSMIAGYLKAGEIGLASEMFREMPER-----DLVSWNSMIDGLVKHGKCELAREIFE 347
             WNSM+ G    G    A E+F  +        D VS+ +++      G  + AR+ F 
Sbjct: 325 SCWNSMVMGLAMNGCEEEALELFSRLESSIDLRPDGVSFLAVLTACNHSGMVDKARDYFS 384

Query: 346 MMKHKNVVS-----WTCMI 305
           +M+ K  +      ++CM+
Sbjct: 385 LMRGKYNIEPSTRHYSCMV 403


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  205 bits (521), Expect = 3e-50
 Identities = 121/327 (37%), Positives = 185/327 (56%)
 Frame = -3

Query: 994 KCKSMPVLHQIHASVIKSGLTSHTFLMSKLISICSNSRSPSDMNYALSIFNSVEEPNFFI 815
           +C +M  L QIHAS+IK+GL S T   S++++ C    SPSDMNYA  +F  +   N F+
Sbjct: 34  QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCC--ASPSDMNYAYLVFTRINHKNPFV 91

Query: 814 FFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSVLKACGRSCAFEEGRQIHGQ 635
           + T+IR F+ +     +I ++  ML +         + PSV KA GR     +GRQ+HG 
Sbjct: 92  WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151

Query: 634 IMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDVYSWNSMIAGYLKAGEIGLA 455
           ++K   + D F+ N+ML MY     +  A R+F  M   DV +WNSMI G+ K G I  A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQA 211

Query: 454 SEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEMMKHKNVVSWTCMISGYMLNHXRN 275
             +F EMP+R+ VSWNSMI G V++G+ + A ++F  M+ K+V        G+ +    N
Sbjct: 212 QNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKP-----DGFTMVSLLN 266

Query: 274 *TXXXXXXXXXXXXADLGFVEEGKWIHSFVCRSKFLSIDSGVIGSALIDMYSKCGYIDNA 95
                         A LG  E+G+WIH ++ R++F    + ++ +ALIDMY KCG I+  
Sbjct: 267 ------------ACAYLGASEQGRWIHEYIVRNRFEL--NSIVVTALIDMYCKCGCIEEG 312

Query: 94  RDIFKSISHRRNIGDWNSMLSGLAIHG 14
            ++F+  + ++ +  WNSM+ GLA +G
Sbjct: 313 LNVFE-CAPKKQLSCWNSMILGLANNG 338



 Score = 68.2 bits (165), Expect = 5e-09
 Identities = 57/247 (23%), Positives = 104/247 (42%), Gaps = 32/247 (12%)
 Frame = -3

Query: 967 QIHASVIKSGLTSHTFLMSKLI----------------------------SICSNSRSPS 872
           Q+H  VIK GL   +F+ + ++                            S+        
Sbjct: 147 QLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCG 206

Query: 871 DMNYALSIFNSVEEPNFFIFFTLIRAFADTPNSLQSILLYSKMLTTLEEFHGLEFSIPSV 692
            ++ A ++F+ + + N   + ++I  F        ++ ++ +M     +  G  F++ S+
Sbjct: 207 LIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG--FTMVSL 264

Query: 691 LKACGRSCAFEEGRQIHGQIMKTDFQCDPFVSNSMLRMYFDLKDIRSARRLFDTMPHRDV 512
           L AC    A E+GR IH  I++  F+ +  V  +++ MY     I     +F+  P + +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324

Query: 511 YSWNSMIAGYLKAG----EIGLASEMFREMPERDLVSWNSMIDGLVKHGKCELAREIFEM 344
             WNSMI G    G     + L SE+ R   E D VS+  ++      G+   A E F +
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384

Query: 343 MKHKNVV 323
           MK K ++
Sbjct: 385 MKEKYMI 391


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