BLASTX nr result

ID: Papaver27_contig00010318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010318
         (376 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324089.1| U-box domain-containing family protein [Popu...    59   9e-07
ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation fa...    57   2e-06
ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation fa...    57   2e-06
gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus n...    56   4e-06
ref|XP_007032650.1| U-box domain-containing protein isoform 1 [T...    56   6e-06
ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation fa...    55   8e-06

>ref|XP_002324089.1| U-box domain-containing family protein [Populus trichocarpa]
           gi|222867091|gb|EEF04222.1| U-box domain-containing
           family protein [Populus trichocarpa]
          Length = 1019

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/49 (65%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRLSEPFL AN +  DKI+  YVF N  LD
Sbjct: 345 VDPLSCASSGMFVNLSAVMLRLSEPFLDANLSKKDKIDPNYVFQNNRLD 393


>ref|XP_006338399.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
           tuberosum]
          Length = 1040

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRL EPFL AN T  DKI+  YVF +T L+
Sbjct: 348 VDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLE 396


>ref|XP_004232186.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
           lycopersicum]
          Length = 1040

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRL EPFL AN T  DKI+  YVF +T L+
Sbjct: 348 VDPLSCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPQYVFSSTRLE 396


>gb|EXB38055.1| putative ubiquitin conjugation factor E4 [Morus notabilis]
          Length = 1070

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRL EPFL AN T  DKI+  YVF+   LD
Sbjct: 383 VDPMSCASSGMFVNLSAVMLRLCEPFLDANLTKKDKIDPKYVFNGDRLD 431


>ref|XP_007032650.1| U-box domain-containing protein isoform 1 [Theobroma cacao]
           gi|590650471|ref|XP_007032651.1| U-box domain-containing
           protein isoform 1 [Theobroma cacao]
           gi|508711679|gb|EOY03576.1| U-box domain-containing
           protein isoform 1 [Theobroma cacao]
           gi|508711680|gb|EOY03577.1| U-box domain-containing
           protein isoform 1 [Theobroma cacao]
          Length = 1042

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/49 (63%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRL EPFL AN T  DKI+  YVF +  LD
Sbjct: 357 VDPISCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDPNYVFYSNRLD 405


>ref|XP_006347208.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Solanum
           tuberosum]
          Length = 1019

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/49 (61%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
 Frame = -1

Query: 322 VDPVNCAS*GSIVNLSDVMLRLSEPFLYANFT--DKINAMYVFDNTPLD 182
           VDP++CAS G  VNLS VMLRL EPFL  N T  DKI+  YVF +T L+
Sbjct: 348 VDPLSCASSGMFVNLSVVMLRLCEPFLDVNLTKRDKIDPQYVFSSTRLE 396


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