BLASTX nr result

ID: Papaver27_contig00010224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010224
         (1447 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007023466.1| F-box/RNI-like superfamily protein [Theobrom...    52   7e-06

>ref|XP_007023466.1| F-box/RNI-like superfamily protein [Theobroma cacao]
           gi|508778832|gb|EOY26088.1| F-box/RNI-like superfamily
           protein [Theobroma cacao]
          Length = 489

 Score = 52.0 bits (123), Expect(2) = 7e-06
 Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
 Frame = +1

Query: 196 SLIASKSLVNLEMRLNFGVRCTGAILPTSMDLPRLKVLWICGVSIPNEELSKRLFSSCPV 375
           SL  +K+L  LE+ ++  V      +PT + LP LK L +  +   +++  +RLFSSCPV
Sbjct: 133 SLFRNKTLTKLELDVSKFVMT----IPTKVCLPSLKSLHLDCLEFVDDDSVRRLFSSCPV 188

Query: 376 LENLTLCNC---DIPNLTVNSLSLKSFIIVL 459
           LE+L +C+C   ++  L +++ SLK   + L
Sbjct: 189 LEDLFICSCLWRNVRELNISNPSLKRLTLNL 219



 Score = 26.2 bits (56), Expect(2) = 7e-06
 Identities = 19/71 (26%), Positives = 35/71 (49%)
 Frame = +3

Query: 6   VFILRNESDIQRFAIDWYSYAEYEDIMMKNVNRWIVHAVKCNVNKMSL*IRQGNPEAFEI 185
           V +  N + I+RF +    +  +ED+    +  WI  A++  + ++ L IR G+P    +
Sbjct: 74  VLLFHNAACIKRFRLICGGF--HEDVDAYRICGWISFALRQRLQELYLEIRIGDPRGM-L 130

Query: 186 PHQLVNCK*VT 218
           P  L   K +T
Sbjct: 131 PASLFRNKTLT 141


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