BLASTX nr result
ID: Papaver27_contig00010112
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00010112
(5845 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 413 e-149
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 378 e-143
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 385 e-139
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 405 e-130
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 352 e-128
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga... 328 e-128
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 350 e-127
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 338 e-127
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 403 e-126
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 395 e-119
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 395 e-119
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 318 e-118
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 355 e-116
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 427 e-116
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 420 e-114
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 268 e-114
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 419 e-113
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 383 e-109
ref|XP_007031312.1| Uncharacterized protein TCM_016762 [Theobrom... 282 e-109
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 397 e-107
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 413 bits (1062), Expect(3) = e-149
Identities = 223/634 (35%), Positives = 347/634 (54%), Gaps = 45/634 (7%)
Frame = -1
Query: 3217 KNYTKKARQEESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSD 3038
+++ + A EE Q+SRV WL+ GD+NT FFH + RR+ N I L D G R+ +
Sbjct: 337 RSWAELALAEERFLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENT 396
Query: 3037 AEISAEYVAYYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDS-VTDNEIIHALS 2861
E+ V ++ ELFG ++ + E L +E R+++++ V++ +I
Sbjct: 397 DELQTHCVDFFKELFGSSSHLISAEGISQINSLTRFKCDENTRQLLEAEVSEADIKSEFF 456
Query: 2860 TIDSDKAPGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNA 2681
+ S+K+PGPDG+++ FFK W I+G I A++ F S +LLG+ N+T +++ PK NA
Sbjct: 457 ALPSNKSPGPDGYTSEFFKKTWSIVGPSLIAAVQEFFRSGRLLGQWNSTAVTMVPKKPNA 516
Query: 2680 TTLNDFRPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLR 2501
+ +FRPI+CCN +YK I+K+L RL+N+ +SP QS+F+ GR + +N++LA EL++
Sbjct: 517 DRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQ 576
Query: 2500 NYHRNNGATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVN 2321
+ + N ++ +K+DLRKA+D + I+ L N P +F+ WIK CIT+ FSI V+
Sbjct: 577 GFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVS 636
Query: 2320 GSAYGYIHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCF 2141
GS GY G +G+RQG PLSP LFV+ ME+ + ++ + + HPK I+ L F
Sbjct: 637 GSLCGYFKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAF 696
Query: 2140 ADDLLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFE 1961
ADDL++F G A S + + L SF N +GL +N KS ++ + ++D T GF
Sbjct: 697 ADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLED-TDKEDTLAFGFV 755
Query: 1960 VGTLPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-----IELIYKQPS 1796
GT P RYLGLPLL +L D L+DK+ +R W + L++AG +IY +
Sbjct: 756 NGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVN 815
Query: 1795 ------------------------------------VKWTNFFHPMSEGGLGIKCISTTN 1724
V W N P +EGGLG++ T N
Sbjct: 816 FWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWN 875
Query: 1723 IAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFV 1544
+NLR IW + + ++++WV W N ++ +FW +A + SW W+ IL RP+A +F+
Sbjct: 876 KTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNAEAASHHSWIWKAILGLRPLAKRFL 935
Query: 1543 LHLIGNGDNTKLWKDNWLGHGSL---MGMFPPQM 1451
+GNG W D+W G L +G PQ+
Sbjct: 936 RGAVGNGQLLSYWYDHWSNLGPLIEAIGASGPQL 969
Score = 132 bits (331), Expect(3) = e-149
Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
Frame = -3
Query: 4022 LGRIWVIWDGSVVKANYISSSAQHITVSVSIQN-GPWFIATFVYAHNSETQREDLWSNIK 3846
LGRIWV+WD +V + +S S Q I+ +V + + F+ TFVYA N R LWS ++
Sbjct: 67 LGRIWVVWDPAV-EVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELE 125
Query: 3845 CFSESNTL---PWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQDSQIFDCPYVGCF 3675
+ + T PW ++GDFN L + G T M + CL S I D P+ G
Sbjct: 126 LLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNH 185
Query: 3674 YTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGP 3495
YTW N Q+ + I K+DR ++N +WL P S FC S H P +++ G
Sbjct: 186 YTWWNNQE-NNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRN 244
Query: 3494 RAYRFFITCTE*DDFLKVVEEAWN-IPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGD 3318
+ ++ +F++ + W+ + QG+ MF + K +K + + + ++S
Sbjct: 245 KPFKLSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEK 304
Query: 3317 QVVAAKAQLDTTQSNLQLAP 3258
+VV A L T Q+NL AP
Sbjct: 305 RVVQAAQNLKTCQNNLLAAP 324
Score = 37.4 bits (85), Expect(3) = e-149
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 4201 WNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
WN+ GFN+ ++ + + + ++ETRV+E R L S P WK N
Sbjct: 7 WNVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCN 61
Score = 80.9 bits (198), Expect = 7e-12
Identities = 43/170 (25%), Positives = 74/170 (43%)
Frame = -3
Query: 1295 VEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLS 1116
+E ++ F K T+ LR ++ K W +W+ CIP++ F WV+ L + +
Sbjct: 1025 IEGSSSTSFSSKLTWECLRQRDTTKLWAAAVWYKGCIPKYAFNFWVAHLNRLPVRARTTH 1084
Query: 1115 WGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDH 936
W +C +C E HLF C+ + ++W I+W + +
Sbjct: 1085 WSTNRPSLCCVCQRETETRDHLFIHCTLGSLIWQQVLARFGRSQMF-REWKDIIEWMLSN 1143
Query: 935 IKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 786
G+ GT+K+L I+H+W ERN R S S +F ++ +R
Sbjct: 1144 --QGSFSGTLKKLAVQTAIFHIWKERNSRLHSAMSASHTAIFKQIDRSIR 1191
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 378 bits (970), Expect(3) = e-143
Identities = 215/592 (36%), Positives = 322/592 (54%), Gaps = 45/592 (7%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
+ES+ KQ+SR+QWL LGD+N+KFF +IK R++RN+I++L +D G++L + EI E
Sbjct: 343 DESILKQKSRIQWLSLGDSNSKFFFTAIKVRKARNKIVLLQNDRGDQLTENTEIQNEICN 402
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNI---VTEEEGRKMVDSVTDNEIIHALSTIDSDKA 2840
+Y L G ++ L A D + +V + ++ ++V +T EI AL+ ID KA
Sbjct: 403 FYRRLLGTSSSQL---EAID-LHVVRVGAKLSATSCAQLVQPITIQEIDQALADIDDTKA 458
Query: 2839 PGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFR 2660
PG DGF++ FFK W +I + + I F + + +N T ++L PK+ A D+R
Sbjct: 459 PGLDGFNSVFFKKSWLVIKQEIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYR 518
Query: 2659 PIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNG 2480
PIACC+ +YK I+KILT RL+ V ++V Q+ FI R I DNI+LA EL+R Y+R +
Sbjct: 519 PIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHV 578
Query: 2479 ATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYI 2300
+ C IK+D+RKAYD + + +ML + FP FI WI C+ T +SI++NG
Sbjct: 579 SPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPF 638
Query: 2299 HGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVF 2120
++G+RQG PLSP+LF L ME + M +F+ HPKC+ +THL FADDLL+F
Sbjct: 639 DAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMF 698
Query: 2119 MKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMR 1940
+ DA S + + A SFS +GL + KS I+ V + + +G+LP R
Sbjct: 699 ARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFR 758
Query: 1939 YLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG--------------------- 1823
YLG+PL S +L+ C PL+DK+ +R Q W A L+YAG
Sbjct: 759 YLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFP 818
Query: 1822 ---------------------IELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLR 1706
++ YK P V W P S GGL + + N A L+
Sbjct: 819 LPKKLIKAVETTCRKFLWTGTVDTSYKAP-VAWDFLQQPKSTGGLNVTNMVLWNKAAILK 877
Query: 1705 HIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATK 1550
+W I ++ +WVRWV IK Q+ + +++SW R+I + R + T+
Sbjct: 878 LLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTR 929
Score = 130 bits (328), Expect(3) = e-143
Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 1/275 (0%)
Frame = -3
Query: 4019 GRIWVIWDGSVVKANYISSSAQHITVSVSIQNG-PWFIATFVYAHNSETQREDLWSNIKC 3843
GRIWV W + V N +S + Q IT+ V G F VY ++ R+ LW +
Sbjct: 67 GRIWVGWLNNDVNINVLSVTEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVLWEELYN 126
Query: 3842 FSESNTLPWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQDSQIFDCPYVGCFYTWS 3663
F P L+GD+N A ++ GN VS + L+ + +Q+ + P G FY+W+
Sbjct: 127 FVSVCHEPCILIGDYNAVYSAQDRLNGNDVSEAETSDLRSFVLKAQLLEAPTTGLFYSWN 186
Query: 3662 NRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPRAYR 3483
N+ RI+ ++D+S +N+AW+ +PD V ++ +GIS HSP+I ++ G R ++
Sbjct: 187 NKSIGADRISSRIDKSFVNVAWINQYPDVVVEYREAGISDHSPLIFNLATQHDEGGRPFK 246
Query: 3482 FFITCTE*DDFLKVVEEAWNIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQVVAA 3303
F + + F++VV+EAW M RL+ VK L + FS QV
Sbjct: 247 FLNFLADQNGFVEVVKEAWGSANHRFKMKNIWVRLQAVKRALKSFHSKKFSKAHCQVEEL 306
Query: 3302 KAQLDTTQSNLQLAPLCQASINNERTAIKKLHQES 3198
+ +L Q+ +++ + + E+ I +L + S
Sbjct: 307 RRKLAAVQALPEVSQVSELQ-EEEKDLIAQLRKWS 340
Score = 54.7 bits (130), Expect(3) = e-143
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = -1
Query: 4201 WNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
WN+ G NDP+K E+K+F++ I +C + ETRV++QN+ +I W +N
Sbjct: 6 WNVRGLNDPIKVKEVKHFLHSQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINN 60
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 385 bits (990), Expect(3) = e-139
Identities = 206/583 (35%), Positives = 323/583 (55%), Gaps = 41/583 (7%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
E+S+ +Q+SR+ WL+ GD N+K F ++K R + NRI +L ++G + E+ E +
Sbjct: 340 EDSILQQKSRITWLQQGDTNSKLFFTAVKARHAINRIDMLNTEDGRVIQDADEVQEEILE 399
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGP 2831
+Y +L G TL + + + ++ + ++ V EI AL+ I +DKAPG
Sbjct: 400 FYKKLLGTRASTLMGVDL-NTVRGGKCLSAQAKESLIREVASTEIDEALAGIGNDKAPGL 458
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DGF+A+FFK W I + I+ F+++++ +N +++L PKV +AT + +FRPIA
Sbjct: 459 DGFNAYFFKKSWGSIKQEIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIA 518
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
CC V+YK I+K+LT R+K + ++V+ QS FI GR I DNI+LA EL+R Y R + +
Sbjct: 519 CCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPR 578
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
C +K+D+RKAYD + + T+L +F FP +F+ WI C++T +S++VNG R
Sbjct: 579 CIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQAR 638
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+G+RQG P+SP+LF L ME + + + S F+ HPKC+ ITHL FADDLL+F +
Sbjct: 639 KGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRA 698
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
D S + + A FS+ +GL +H KSNI+ VDD T+ + ++G LP RYLG
Sbjct: 699 DKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLG 758
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------------- 1811
+PL S +L++ C PLV+ + +R Q+W A+ L+YAG ++LI
Sbjct: 759 VPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIFPLSK 818
Query: 1810 ---------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWD 1694
K+ V W P S GG + + N A L+ +W
Sbjct: 819 KVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLKLLWA 878
Query: 1693 IMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHR 1565
I ++ +WVRW+ IK QD + ++W R+I+ R
Sbjct: 879 IEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVKAR 921
Score = 100 bits (249), Expect(3) = e-139
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 1/255 (0%)
Frame = -3
Query: 4037 HSHHELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNGPWFIATFVYAHNSETQREDLW 3858
+SH RIW+ W + V + Q + + Q+ + VY ++ R+ LW
Sbjct: 61 YSHSARERIWIGWRPAWVNVTLTHTQEQLMVCDIQDQSHKLKMVA-VYGLHTIADRKSLW 119
Query: 3857 SNI-KCFSESNTLPWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQDSQIFDCPYVG 3681
S + +C + + P ++GDFN +++++ G V+ Q L S + +
Sbjct: 120 SGLLQCVQQQD--PMIIIGDFNAVCHSNDRLYGTLVTDAETEDFQQFLLQSNLIESRSTW 177
Query: 3680 CFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGN 3501
+Y+WSN R+ ++D++ +N+ WL ++ + + GIS HSP++ ++ R
Sbjct: 178 SYYSWSNSSIGRDRVLSRIDKAYVNLVWLGMYAEVSVQYLPPGISDHSPLLFNLMTGRPQ 237
Query: 3500 GPRAYRFFITCTE*DDFLKVVEEAWNIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFG 3321
G + ++F E +FL+ VE+AWN + LK VK L K
Sbjct: 238 GGKPFKFMNVMAEQGEFLETVEKAWNSVNGRFKLQAIWLNLKAVKRELKQMKTQKIGLAH 297
Query: 3320 DQVVAAKAQLDTTQS 3276
++V + QL QS
Sbjct: 298 EKVKNLRHQLQDLQS 312
Score = 63.2 bits (152), Expect(3) = e-139
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = -1
Query: 4201 WNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
WN+ G NDP K E+KNF+Y + I +C ++ETRV+EQN ++ + WK +N
Sbjct: 6 WNVRGMNDPFKIKEIKNFLYSHKIVVCALLETRVREQNASKVQGKLGKDWKWLNN 60
Score = 63.2 bits (152), Expect = 1e-06
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = -3
Query: 1274 EFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDP 1095
+F +K Y + + +W +LI + P+ FI+W+ L L T ++ WG++ D
Sbjct: 938 KFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRISRWGVQCDL 997
Query: 1094 VCILCNIMLEDDYHLFFSCSYP--VFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGN 921
LC E HLFFSCSY V+ V Q+ + C K
Sbjct: 998 NYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSV--CGQARK--- 1052
Query: 920 SIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMI 798
G + +++ F+Y +W +RN+RTF+ ++ + K++
Sbjct: 1053 KKGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKIL 1093
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 405 bits (1041), Expect(2) = e-130
Identities = 238/728 (32%), Positives = 373/728 (51%), Gaps = 57/728 (7%)
Frame = -1
Query: 3262 LLCVKLQST-------TRGRQLKNYTK---KARQEESMRKQQSRVQWLELGDNNTKFFHN 3113
LLC K +T T +LK YT + EE KQ+S++ W+ +GD N +FH
Sbjct: 616 LLCEKQATTLANPSQETIAEELKAYTDWTHLSELEEGFLKQKSKLHWMNVGDGNNSYFHK 675
Query: 3112 SIKERRSRNRILVLYDDEGNRLNSDAEISAEYVAYYTELFGHANDTLYDENAWDQM*LVN 2933
+ + R+ RN I + L + EI E ++ E + + + D L++
Sbjct: 676 AAQVRKMRNSIREIRGPNAETLQTSEEIKGEAERFFNEFLNRQSGDFHGISVEDLRNLMS 735
Query: 2932 I---VTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGPDGFSAHFFKSCWRIIGGDFIKAI 2762
VT++ + VT EI L + ++K+PGPDG+++ FFK+ W + G DFI AI
Sbjct: 736 YRCSVTDQN--ILTREVTGEEIQKVLFAMPNNKSPGPDGYTSEFFKATWSLTGPDFIAAI 793
Query: 2761 KSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIACCNVMYKCIAKILTVRLKNVARK 2582
+S F L +NAT+++L PK A + D+RPI+CCNV+YK I+KIL RLK +
Sbjct: 794 QSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPS 853
Query: 2581 LVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATICAIKIDLRKAYDCIR*DVILTML 2402
+ QS+F+ R + +N++LA EL+++YH+ + CA+KID+ KA+D ++ +L L
Sbjct: 854 FILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTL 913
Query: 2401 TKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGRRGIRQGCPLSPYLFVLLMEVFNS 2222
NFPE F WIK+CI+T FS+ VNG G+ RG+RQGC LSPYLFV+ M V +
Sbjct: 914 EALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFVICMNVLSH 973
Query: 2221 IMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKGDARSANSLATALTSFSNRTGLVV 2042
++ + R HPKC+ +THLCFADDL+VF+ G S + F+ R+GL +
Sbjct: 974 MIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQI 1033
Query: 2041 NHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLGLPLLSTRLSHQDCIPLVDKVKSR 1862
+ KS I+L+ V F G LP+RYLGLPLL+ +++ D PL++ VK++
Sbjct: 1034 SLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTK 1093
Query: 1861 IQSWKARDLAYAG-----------------------------IE------------LIYK 1805
I SW AR L+YAG IE L K
Sbjct: 1094 ISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWSGPVLNPK 1153
Query: 1804 QPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDF 1625
+ + W++ P EGGLGIK ++ N L+ IW ++S++ ++WV W+ +I+ F
Sbjct: 1154 KAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQPSLWVTWIWTFIIRKGTF 1213
Query: 1624 WYLKAPTD-SSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQ 1448
W + SW W+++L +R +A + NG +T W D+W G L+ + +
Sbjct: 1214 WSANERSSLGSWMWKKLLKYRELAKSMHKVEVRNGSSTSFWYDHWSHLGRLLDITGTRRV 1273
Query: 1447 FDSDHHLDARVSSCLVEGTWNLSPNLKNALGNFVTEVESIQTDHLIC--DMVVWRLATRG 1274
D L+ + + L T + E++ +Q D+ +WR + +
Sbjct: 1274 IDLGIPLETNLETVL--RTHQHRQHRAAIYNRINAEIQRLQQQEREAGPDISLWR-SLKN 1330
Query: 1273 NFSSRILT 1250
+F+ R +T
Sbjct: 1331 DFNKRFIT 1338
Score = 91.7 bits (226), Expect(2) = e-130
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Frame = -3
Query: 1271 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1092
F K T+N +R + ++ W+K +WFP+ P++ F++W+++Q L T ++ +W
Sbjct: 1336 FITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQLVT 1395
Query: 1091 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQID-WCVDHIKGGNSI 915
C LCN E HLFFSC Y + + ++DW++ C ++ +
Sbjct: 1396 CTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTN-YSRDWNRLFTLLCTSNLPRDHLF 1454
Query: 914 GTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCK 765
+ R +F A IYH+W ERN R + S P L + + VR R+++ +
Sbjct: 1455 --LFRYVFQASIYHIWRERNARRHGEISSPTNRLIKLIDKTVRNRISSIR 1502
Score = 62.8 bits (151), Expect(2) = 5e-11
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Frame = -3
Query: 5372 MVDGNLSASIKKDDFSELVNEYEGLVVGGFIGHRLPYGLVKRTVEKAWKIKG-SLEMTVH 5196
MV+G+ + + F + ++ L++G F V V K W + ++++ +
Sbjct: 44 MVNGDSIVQVPNEIFEDSTPLWDDLLIGRFPQISPHIAKVHVIVNKIWPLGDKTVKIDAY 103
Query: 5195 GARPYIMKFSLEEDRITA--LEHGPVFMSNVPFFVRAWKPYIEQELENIEAVPVWMILRG 5022
+KF + E + A L G ++++P V W P E I+ +P+W+ ++
Sbjct: 104 VVDTKTIKFRIRESSVRARVLRRGMWNIADMPMIVSKWSPVAEDAQPEIKTMPMWITIKN 163
Query: 5021 VPLHLFNPKGLSIIMSVIGKPLLVDGPTAARTRMAYARVCVEVNPKSDLRARY 4863
VP +F KGLS + S IG+P + T A+V VE + ++ ++
Sbjct: 164 VPRSMFTWKGLSFLASPIGEPKKLHPDTVLCNSFEEAKVFVEADLTQEMPKQF 216
Score = 35.4 bits (80), Expect(2) = 5e-11
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = -2
Query: 4854 TDDGRKFSVGVEYSWKPPQCSKCSTFCHNESKCPKK-------TEHQAKGGSTSNPPMVK 4696
++ G V +Y W PP+CS CS + H + C + T + + + PP++K
Sbjct: 220 SETGVDAMVEYKYPWLPPRCSSCSKWGHIQEVCLTRPSPNQLSTPTEIETEDKTEPPLMK 279
Query: 4695 QRSIHGKHKSNDMVL 4651
++ + KS L
Sbjct: 280 EKPLEILSKSPSATL 294
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 893
Score = 352 bits (902), Expect(3) = e-128
Identities = 194/556 (34%), Positives = 310/556 (55%), Gaps = 45/556 (8%)
Frame = -1
Query: 3199 ARQEESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAE 3020
A+ EES Q+S + WL GDNNT +FH R+S N I L DD G R+ + I
Sbjct: 342 AKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEG 401
Query: 3019 YVAYYTELFGHANDTLYDENAWDQM*LVNIVT----EEEGRKMVDSVTDNEIIHALSTID 2852
+ F + EN+ Q + +++ ++ + S +D +I A ++
Sbjct: 402 IKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLP 461
Query: 2851 SDKAPGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTL 2672
+KA GPDG+S+ FFK W ++G + +A++ F S +LL + NAT + L PK+TN++ +
Sbjct: 462 RNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKM 521
Query: 2671 NDFRPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYH 2492
DFRPI+C N +YK IAK+LT RLK + +++SP QS+F+ GR + +N++LA E++ Y+
Sbjct: 522 TDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYN 581
Query: 2491 RNNGATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSA 2312
N ++ +K+DLRKA+D +R D I++ PEKF+ WI CI+T FS+MVNGS+
Sbjct: 582 TKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSS 641
Query: 2311 YGYIHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADD 2132
G+ +G+RQG PLSPYLFVL MEVF+S++ + + HPK I+HL FADD
Sbjct: 642 SGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADD 701
Query: 2131 LLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGT 1952
++VF G + S + ++ AL F++ +GL VN K+N++L+ D++ + +I + GF + T
Sbjct: 702 VMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPIST 760
Query: 1951 LPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------ 1811
LP+RYLGLPL+S +L + ++ R +SW + L++AG ++LI
Sbjct: 761 LPIRYLGLPLMSRKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWM 815
Query: 1810 ----------------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAV 1715
K + W+ P +EGG+G++ + N
Sbjct: 816 STFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVGLRRFTPWNKTF 875
Query: 1714 NLRHIWDIMSSKNTIW 1667
LR IW + + + +W
Sbjct: 876 YLRFIWPLFADNDVLW 891
Score = 119 bits (299), Expect(3) = e-128
Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
Frame = -3
Query: 4061 SFVEAF**HSHHELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNGP-WFIATFVYAHN 3885
SFVE + LG+IWV+WD SV K I S Q IT + + + P WF+ + VYA N
Sbjct: 58 SFVENY---EFSVLGKIWVLWDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASN 113
Query: 3884 SETQREDLWSNIKCFSESNTL---PWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQ 3714
E R++LW+ + + S + W ++GDFN L N + A + CL
Sbjct: 114 EEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINAN--IGRKIRAFRSCLL 171
Query: 3713 DSQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSP 3534
DS ++D Y G YTW N+ + + K+DR ++N W +FP + +F S HS
Sbjct: 172 DSDLYDLVYKGSSYTWWNKCSSRP-LAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSS 230
Query: 3533 MIMSVFADRGNGPRAYRFFITCTE*DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVKDNL 3357
+ + R +RFF DFL+++ E W + V G+ M+ +LK++K +
Sbjct: 231 CEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPI 290
Query: 3356 ILWKKNNFSNFGDQVVAAKA 3297
+ + N+S+ +V A A
Sbjct: 291 CCFSRENYSDIEKRVSEAHA 310
Score = 40.4 bits (93), Expect(3) = e-128
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -1
Query: 4222 MTINMGCWNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHF 4043
M + CWN+ GFN K + N G++ET V++ + ++++ P W
Sbjct: 1 MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60
Query: 4042 DN 4037
+N
Sbjct: 61 EN 62
>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1389
Score = 328 bits (840), Expect(4) = e-128
Identities = 213/699 (30%), Positives = 336/699 (48%), Gaps = 62/699 (8%)
Frame = -1
Query: 3175 KQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVAYYTEL 2996
KQ+ + ++ LGD N+KF+H R+ RN+I D + I E + +
Sbjct: 351 KQKCKSDFMVLGDTNSKFYHTHASIRKYRNQIKEFIPDNAQPITQPDLIEKEITLAFKKR 410
Query: 2995 FGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGPDGFSA 2816
F +++N D L IV+E + + +V+ EI +A+ + DK+PGPDGF
Sbjct: 411 FISNPACKFNQNV-DFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPP 469
Query: 2815 HFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIACCNVM 2636
+FF+ W +IG +A+++ F S +L EVN T ++L PKV N FRPI+ C+ +
Sbjct: 470 YFFQKYWTLIGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTI 529
Query: 2635 YKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNG-ATICAIK 2459
YK I+KI+T RLK K++ P Q +FI R IQDNI++AHE+ ++ G AIK
Sbjct: 530 YKVISKIITNRLKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIK 589
Query: 2458 IDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGRRGIR 2279
+D+ KAYD + I T + K F +I WI+ CI++ FS++VNG RGIR
Sbjct: 590 LDMEKAYDRLEWKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRGIR 649
Query: 2278 QGCPLSPYLFVLLMEVFNSIMLKQVASRQFS--LHPKCKI---------HVITHLCFADD 2132
QG PLSPYLF+L E+ +R+FS H K+ I L FADD
Sbjct: 650 QGDPLSPYLFILCAELL---------AREFSKACHEPGKLIGVPIGRTRTRIPFLTFADD 700
Query: 2131 LLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLS-SVDDITSYSIKYVPGFEVG 1955
++F K S + + L + +G +VN+ KS S +V DI + + G +
Sbjct: 701 TMIFAKATEASCHKIRQILDKYCLMSGQLVNYHKSAFQCSPNVRDIDKVNFASILGMQES 760
Query: 1954 TLPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAGIELIY----------- 1808
+ YLG P++++R++ + ++ K ++ WKA L+ AG ++
Sbjct: 761 SELGDYLGCPIINSRVTKETFAGVISKTVQQLPKWKANSLSQAGRTVLIQSNLASKASFQ 820
Query: 1807 ------------------------KQPSVK------WTNFFHPMSEGGLGIKCISTTNIA 1718
K P+ K W P S GG+G + TNIA
Sbjct: 821 MQSFTLPKKVLTTLDTTYRNFFWNKDPAAKSANFIGWNKICQPKSVGGVGFRKAEVTNIA 880
Query: 1717 VNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLH 1538
+ ++ +W IM SK+ IWV+ V +K Q+ K P+++SW W+ +L HR +K +
Sbjct: 881 LQMKLLWKIMVSKDNIWVKLVTQKYLKEQNLLVCKIPSNASWQWKNLLRHRNFFSKGLRW 940
Query: 1537 LIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSDHHLDARVSSCLVE-GTWNL------- 1382
LIG+G + W DNW+ L + P + + + +V+ C G W++
Sbjct: 941 LIGDGQDISFWTDNWIFQYPLNSKYVPTVGSE-----NIKVAECFNGLGGWDIPKLLTLV 995
Query: 1381 SPNLKNALGNFVTEVESIQTDHLICDMVVWRLATRGNFS 1265
PN+ A+ + S Q D ++W L G +S
Sbjct: 996 PPNIVKAISSVFIPSSSQQ------DRLLWGLTPTGQYS 1028
Score = 103 bits (258), Expect(4) = e-128
Identities = 66/255 (25%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Frame = -3
Query: 4019 GRIWVIWDGSVVKAN---YISSSAQHITVSVSIQN-GPWFIATFVYAHNSETQREDLWSN 3852
G +W+ W ++ I S + I S+++ N F+A F+YA + + W
Sbjct: 66 GGLWLFWRDCILNPFSLVVIYKSVRFIACSINLLNQNLQFVAIFIYAPAQKEFKSSFWDE 125
Query: 3851 IKCFSESNTLPWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQDSQIFDCPYVGCFY 3672
+ + S + P+ ++GDFN +K GG P S++ +Q + + G +
Sbjct: 126 LIAYVSSLSFPFIILGDFNEINSPSDKLGGAPFSSSRAYYMQNLFSQVDCTEISFTGQIF 185
Query: 3671 TWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPR 3492
TW ++D + I+ +LDR + + +WL +FP + S H + + A+ +
Sbjct: 186 TWRKKKDGPNNIHERLDRGVASTSWLMLFPHAFLKHHIFTSSDHCQISLEYLANNKSKAP 245
Query: 3491 AYRF-FITCTE*DDFLKVVEEAWNIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQ 3315
+RF + CT D+ +V+ W G+ MF FV + K VK N W K F N Q
Sbjct: 246 PFRFEKMWCTR-KDYDSLVKRTWCTKFYGSHMFNFVQKCKLVKINSKEWNKTQFGNIFRQ 304
Query: 3314 VVAAKAQLDTTQSNL 3270
+ +L+ Q NL
Sbjct: 305 LRQVDERLEEIQRNL 319
Score = 72.8 bits (177), Expect(4) = e-128
Identities = 86/371 (23%), Positives = 146/371 (39%), Gaps = 9/371 (2%)
Frame = -3
Query: 1280 TGEFFLKDTYNALRHKE---VKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWG 1110
TG++ +K + +R ++K IW H P+ +W + GL T +L
Sbjct: 1024 TGQYSVKSGASLIREVNGGTIEKVEFNWIWGIHAPPKIKNFLWKACNDGLATTSRLERSH 1083
Query: 1109 MEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIK 930
+ V C C+ E HL F C + + + Q+ ++
Sbjct: 1084 IFVPQNCCFCDCPSETICHLCFQCPFTLDIYSHLEDKFQWPAYPSWFSTLQLSSFRSVLE 1143
Query: 929 GGNSIGTIKRLMFNAFIY-HVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCKVYVP 753
+ T++ L + ++ HVW RN+ F+ +S +I + + +P
Sbjct: 1144 ACHINLTLEYLTKLSIVWWHVWYFRNKLIFNNESTSFSQASF-IIHSFMGKWEKANLEIP 1202
Query: 752 DNN*SRSLTAKIRCHTEFFLPVQ--KAISWQKPEVGDVAVNTDGSLSDDG-AGFGAIIRD 582
N K LPV+ K + W P + VN DGS D+G A +G +IR+
Sbjct: 1203 SFNTPLPKDCK--------LPVRSGKNLIWSPPNEDVLKVNFDGSKLDNGQAAYGFVIRN 1254
Query: 581 EHGTALSAVEGSSGP-SSITLHELQGIEAGLKLAI-LNGHSRISLKSDSKTSLSYLKEDG 408
+G L A + G SI + E G+ G+K AI L SR + ++
Sbjct: 1255 SNGEVLMARAKALGVYPSILMAEAMGLLEGIKGAISLQNWSRKIIFEGDNIAVINAMSPS 1314
Query: 407 SKPPWTCHHVWESIKRLRMQFEKCSHSHNYREVNGAADLLASSRPAWNFVVVHPNSFSEE 228
+ PWT ++ L F++ H YRE N AD +A + V+ + +
Sbjct: 1315 ATGPWTIANIILDAGALLGHFQEVKFQHCYREANRLADFMAHKGHSHPEVLCWLPPYCID 1374
Query: 227 LKKIIREDAMG 195
+IR+D +G
Sbjct: 1375 FSLLIRKDVLG 1385
Score = 27.7 bits (60), Expect(4) = e-128
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -1
Query: 4216 INMGCWNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
+++ WN+ G E +F NNIKI + ET+ Q + LA A + H D+
Sbjct: 1 MSIAFWNVRGGCRKNVMEECSDFCKNNNIKILMLCETKSQSPPSQ--LAVSAAGFLHHDS 58
Query: 4036 TRITSWEG 4013
+ G
Sbjct: 59 IPAMGYSG 66
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 350 bits (897), Expect(3) = e-127
Identities = 193/556 (34%), Positives = 309/556 (55%), Gaps = 45/556 (8%)
Frame = -1
Query: 3199 ARQEESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAE 3020
A+ EES Q+S + WL GDNNT +FH R+S N I L DD G R+ + I
Sbjct: 342 AKAEESFFCQKSSISWLYEGDNNTAYFHKMADMRKSINTINFLIDDFGERIETQQGIKEG 401
Query: 3019 YVAYYTELFGHANDTLYDENAWDQM*LVNIVT----EEEGRKMVDSVTDNEIIHALSTID 2852
+ F + EN+ Q + +++ ++ + S +D +I A ++
Sbjct: 402 IKEHSCNFFESLLCGVEGENSLAQSDMNLLLSFRCSVDQINDLERSFSDLDIQEAFFSLP 461
Query: 2851 SDKAPGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTL 2672
+KA GPDG+S+ FFK W ++G + +A++ F S +LL + NAT + L PK+TN++ +
Sbjct: 462 RNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKM 521
Query: 2671 NDFRPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYH 2492
DFRPI+C N +YK IAK+LT RLK + +++SP QS+F+ GR + +N++LA E++ Y+
Sbjct: 522 TDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYN 581
Query: 2491 RNNGATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSA 2312
N ++ +K+DLRKA+D +R D I++ PEKF+ WI CI+T FS+MVNGS+
Sbjct: 582 TKNISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSS 641
Query: 2311 YGYIHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADD 2132
G+ +G+RQG PLSPYLFVL MEVF+S++ + + HPK I+HL FADD
Sbjct: 642 SGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADD 701
Query: 2131 LLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGT 1952
++VF G + S + ++ AL F++ +GL VN K+N++L+ D++ + +I + GF + T
Sbjct: 702 VMVFFDGGSSSLHGISEALDDFASWSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPIST 760
Query: 1951 LPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------ 1811
LP+RYLGLPL+S +L + ++ R +SW + L++AG ++LI
Sbjct: 761 LPIRYLGLPLMSRKLKISEY-----ELVKRFRSWAVKSLSFAGRVQLITSVITGLVNFWM 815
Query: 1810 ----------------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAV 1715
K + W+ P +EGG+ ++ + N
Sbjct: 816 STFVLLLGCVKKIESLCSRFLWSGSIDASKGAKIAWSGVCLPKNEGGVALRRFTPWNKTF 875
Query: 1714 NLRHIWDIMSSKNTIW 1667
LR IW + + + +W
Sbjct: 876 YLRFIWPLFADNDVLW 891
Score = 119 bits (299), Expect(3) = e-127
Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 5/260 (1%)
Frame = -3
Query: 4061 SFVEAF**HSHHELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNGP-WFIATFVYAHN 3885
SFVE + LG+IWV+WD SV K I S Q IT + + + P WF+ + VYA N
Sbjct: 58 SFVENY---EFSVLGKIWVLWDPSV-KVVVIGRSLQMITCELLLPDSPSWFVVSIVYASN 113
Query: 3884 SETQREDLWSNIKCFSESNTL---PWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQ 3714
E R++LW+ + + S + W ++GDFN L N + A + CL
Sbjct: 114 EEGTRKELWNELVQLALSPVVVGRSWIVLGDFNQILNPESAINAN--IGRKIRAFRSCLL 171
Query: 3713 DSQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSP 3534
DS ++D Y G YTW N+ + + K+DR ++N W +FP + +F S HS
Sbjct: 172 DSDLYDLVYKGSSYTWWNKCSSRP-LAKKIDRILVNDHWNTLFPSAYANFGEPDFSDHSS 230
Query: 3533 MIMSVFADRGNGPRAYRFFITCTE*DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVKDNL 3357
+ + R +RFF DFL+++ E W + V G+ M+ +LK++K +
Sbjct: 231 CEVVLDPAVLKAKRPFRFFNYFLHNPDFLQLIRENWYSCNVSGSAMYRVSKKLKHLKLPI 290
Query: 3356 ILWKKNNFSNFGDQVVAAKA 3297
+ + N+S+ +V A A
Sbjct: 291 CCFSRENYSDIEKRVSEAHA 310
Score = 40.4 bits (93), Expect(3) = e-127
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -1
Query: 4222 MTINMGCWNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHF 4043
M + CWN+ GFN K + N G++ET V++ + ++++ P W
Sbjct: 1 MCTKLFCWNVRGFNISSHRRGFKKWFLLNKPLFGGLIETHVKQPKEKKFISNLLPGWSFV 60
Query: 4042 DN 4037
+N
Sbjct: 61 EN 62
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 338 bits (868), Expect(3) = e-127
Identities = 192/563 (34%), Positives = 299/563 (53%), Gaps = 42/563 (7%)
Frame = -1
Query: 3187 ESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVAY 3008
ES +Q+SR++WL GD NT+FFH ++ ++ N I L D+G R+ + +I +AY
Sbjct: 348 ESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAY 407
Query: 3007 YTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSV-TDNEIIHALSTIDSDKAPGP 2831
Y+ L G ++ + + L+ + + ++ ++ EI L ++ +KAPGP
Sbjct: 408 YSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGP 467
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DGF FF W I+ + AI+ F S L NAT I+L PKVT A L FRP+A
Sbjct: 468 DGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVA 527
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
CC +YK I +I++ RLK + V Q FI GR + +N++LA EL+ N+ + T
Sbjct: 528 CCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTR 587
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
+++D+ KAYD + + ++ +L + P FI WI +CI++ +SI NG G+ G+
Sbjct: 588 GCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGK 647
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+GIRQG P+S +LFVL+M+V + + + F+LHP C +ITHL FADD+LVF G
Sbjct: 648 KGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDG 707
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
A S + T L F +GL +N K+ + L + + S+ G G+LP+RYLG
Sbjct: 708 AASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLG 767
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-----IELIY-------------- 1808
+PL+S ++ QD PLVD++ SR SW AR L++AG +IY
Sbjct: 768 VPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPN 827
Query: 1807 ----------------------KQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWD 1694
+ + W P GGLG+K +S+ N + L+ IW
Sbjct: 828 QCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWL 887
Query: 1693 IMSSKNTIWVRWVQDNLIKAQDF 1625
+ +S ++WV WV+ +LI ++F
Sbjct: 888 LFTSAGSLWVSWVRLHLIGRRNF 910
Score = 125 bits (313), Expect(3) = e-127
Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Frame = -3
Query: 4025 ELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNG-PWFIATFVYAHNSETQREDLWSNI 3849
ELGRIW++WD S+ + Q + S+ I + F FVY NSE R LW +I
Sbjct: 65 ELGRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDI 123
Query: 3848 KCFSESNTL---PWCLMGDFNPCLYAHEKEGGNP--VSTTSMTALQGCLQDSQIFDCPYV 3684
S ++ L PW L+GDFN A E N ++ M LQ CL+DSQ+ D P
Sbjct: 124 LVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSR 183
Query: 3683 GCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRG 3504
G F+TWSN Q ++ I KLDR++ N W VFP ++ F G S H+P I+ +
Sbjct: 184 GVFFTWSNHQQ-DNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPP 242
Query: 3503 NGPRAYRFFITCTE*DDFLKVVEEAWNI-PVQGTPMFIFVTRLKNVKDNLILWKKNNFSN 3327
+++++F + +L + AW + G+ MF LK K + FSN
Sbjct: 243 PSKKSFKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSN 302
Query: 3326 FGDQVVAAKAQLDTTQSNLQLAP 3258
+ + +L+ Q L +P
Sbjct: 303 IQQRTAQSLTRLEDIQVELLTSP 325
Score = 44.7 bits (104), Expect(3) = e-127
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = -1
Query: 4204 CWNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
CWNI G N + ++++I NN+ + +ET V ++N + +LAS P W+ N
Sbjct: 5 CWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 60
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 403 bits (1036), Expect(2) = e-126
Identities = 227/650 (34%), Positives = 355/650 (54%), Gaps = 43/650 (6%)
Frame = -1
Query: 3199 ARQEESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAE 3020
A E S Q+SRV WL GD N+ +FH R+S N I L D G+R+ +
Sbjct: 242 AEAEASFFYQRSRVNWLREGDMNSSYFHKMASARQSLNHIHFLSDPVGDRIEGQQNLENH 301
Query: 3019 YVAYYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEII-HALSTIDSDK 2843
V Y+ G E A D L++ + +D+ +E I +A ++ +K
Sbjct: 302 CVEYFQSNLGSEQGLPLFEQA-DISNLLSYRCSPAQQVSLDTPFSSEQIKNAFFSLPRNK 360
Query: 2842 APGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDF 2663
A GPDGFS FF +CW IIGG+ +AI F+S KLL + NAT + L PK+TNA++++DF
Sbjct: 361 ASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDF 420
Query: 2662 RPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNN 2483
RPI+C N +YK I+K+LT RLK+ +S QS+F+ GR +N++LA EL+ Y++ N
Sbjct: 421 RPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKN 480
Query: 2482 GATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGY 2303
A +K+DLRKA+D +R D I++ L N PEKF WI C++T FS+++NG + G+
Sbjct: 481 IAPSSMLKVDLRKAFDSVRWDFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGH 540
Query: 2302 IHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLV 2123
+G+RQG P+SPYLFVL MEVF+ ++ + S + HPK I+HL FADD+++
Sbjct: 541 FWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMI 600
Query: 2122 FMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPM 1943
F G + S + + +L F+ +GL++N K+ ++ + + S S+ GF++G+LP+
Sbjct: 601 FFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMASY-GFKLGSLPV 659
Query: 1942 RYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELIYKQPS---------- 1796
RYLGLPL+S +L+ + PL++K+ +R SW R L++AG ++L+ S
Sbjct: 660 RYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVNFWISSF 719
Query: 1795 ------------------------------VKWTNFFHPMSEGGLGIKCISTTNIAVNLR 1706
V W+ P +EGG+G++ + +N + LR
Sbjct: 720 ILPLGCIKKIESLCSRFLWSSRIDKKGIAKVAWSQVCLPKAEGGIGLRRFAVSNRTLYLR 779
Query: 1705 HIWDIMSSKNTIWVRW-VQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIG 1529
IW + S+ ++WV W Q +L K+ FW SW W+ +L R +A +F+ +G
Sbjct: 780 MIWLLFSNSGSLWVAWHKQHSLGKSTSFWNQPEKPHDSWNWKCLLRLRVVAERFIRCNVG 839
Query: 1528 NGDNTKLWKDNWLGHGSLMGMFPPQMQFDSDHHLDARVSSCLVEGTWNLS 1379
NG + W DNW G L+ + D HL+A++S W+++
Sbjct: 840 NGRDASFWFDNWTPFGPLIKFLGNEGPRDLRVHLNAKISDVCTSEGWSIA 889
Score = 80.9 bits (198), Expect(2) = e-126
Identities = 58/223 (26%), Positives = 106/223 (47%), Gaps = 5/223 (2%)
Frame = -3
Query: 3911 IATFVYAHNSETQREDLWSNIKCFSESNTL---PWCLMGDFNPCLYAHEKEGGNPVSTTS 3741
+ +FVYA E R+ LW+ I FS + PW ++GDFN L+ E + +
Sbjct: 2 VLSFVYASTDEVTRQILWNEIVDFSNDPCVIDKPWTVLGDFNQILHPSEHSTSDGFNVDR 61
Query: 3740 MTAL-QGCLQDSQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDF 3564
T + + + + + D + G +TW N++ + + + KLDR ++N W FP S+ F
Sbjct: 62 PTRIFRETILLASLTDLSFRGNTFTWWNKR-SRAPVAKKLDRILVNDKWTTTFPSSLGLF 120
Query: 3563 CNSGISVHSPMIMSVFADRGNGPRAYRFFITCTE*DDFLKVVEEAW-NIPVQGTPMFIFV 3387
S HS +S+ + + +RF + ++FL ++ W + V G+ M+
Sbjct: 121 GEPDFSDHSSCELSLMSASPRSKKPFRFNNFLLKDENFLSLICLKWFSTSVTGSAMYRVS 180
Query: 3386 TRLKNVKDNLILWKKNNFSNFGDQVVAAKAQLDTTQSNLQLAP 3258
+LK +K + + ++N+S+ + A L QS L +P
Sbjct: 181 VKLKALKKVIRDFSRDNYSDIEKRTKEAHDALLLAQSVLLASP 223
Score = 69.7 bits (169), Expect = 2e-08
Identities = 30/78 (38%), Positives = 43/78 (55%)
Frame = -3
Query: 1256 TYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCN 1077
T++ALR W + +WF P+H F +W + L TK +L SWGM++D C LC+
Sbjct: 935 TWSALRPSSAPVPWARAVWFKGATPKHAFHLWTAHLDRLPTKVRLASWGMQIDTTCGLCS 994
Query: 1076 IMLEDDYHLFFSCSYPVF 1023
+ E HLF SC + F
Sbjct: 995 LHPETRDHLFLSCDFANF 1012
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 395 bits (1015), Expect(2) = e-119
Identities = 214/614 (34%), Positives = 327/614 (53%), Gaps = 41/614 (6%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
EES Q+SRV W GD+NT +FH + R+S N I L D G ++S I V
Sbjct: 208 EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGP 2831
YY L G E + L ++++ ++ S TD+EI A ++ +K GP
Sbjct: 268 YYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGP 327
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DG+S FF+ W IIG + + AI F S +LL + NAT + L PK +NA T+++FRPI+
Sbjct: 328 DGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPIS 387
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
C N +YK I+K+LT RL+ + ++ QS+F+ GRS+ +N++LA E++ Y+R N +
Sbjct: 388 CLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPR 447
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
+K+DL+KA+D ++ + + L PE++I WI CITT F+I VNG+ G+
Sbjct: 448 GMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRST 507
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+G+RQG PLSPYLFVL MEVF+ ++ + S HPK I+HL FADD+++F G
Sbjct: 508 KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
+ S + + L F++ +GL VN KS +F + + D++ GF GT P+RYLG
Sbjct: 568 GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFPIRYLG 626
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------------- 1811
LPL+ +L D PL++K+ +R++SW ++ L++AG +LI
Sbjct: 627 LPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPK 686
Query: 1810 ---------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWD 1694
K V W + P SEGGLG + N + LR IW
Sbjct: 687 GCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWV 746
Query: 1693 IMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNT 1514
+ ++W +W + + + FW + A W W+ +L+ RP+A KF+ +GNG
Sbjct: 747 LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTV 806
Query: 1513 KLWKDNWLGHGSLM 1472
W D W G L+
Sbjct: 807 SFWFDCWTSLGPLI 820
Score = 65.5 bits (158), Expect(2) = e-119
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Frame = -3
Query: 3812 LMGDFNPCLYAHEKEGGNPVSTT---SMTALQGCLQDSQIFDCPYVGCFYTWSNRQDAES 3642
++GDFN L E NP S M CL + ++ D + G +TW N+
Sbjct: 1 MLGDFNQVLLPQEHS--NPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRP 58
Query: 3641 RINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPRAYRFFITCTE 3462
I KLDR + N +W ++P S F N S H + + A+ + R ++FF +
Sbjct: 59 -IAKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLK 117
Query: 3461 *DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQVVAAKAQLDT 3285
+DFL VV + W + V G+ M+ +LK +K + + + N+S + A L T
Sbjct: 118 NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177
Query: 3284 TQSNLQLA 3261
Q NL LA
Sbjct: 178 CQ-NLTLA 184
Score = 71.6 bits (174), Expect = 4e-09
Identities = 39/171 (22%), Positives = 73/171 (42%)
Frame = -3
Query: 1298 CVEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLL 1119
CV+ + F T+ LR + K+W K +WF +P+H F W + L T+ +L+
Sbjct: 883 CVDDVDCQGFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQLNRLPTRQRLV 942
Query: 1118 SWGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVD 939
SWG+ C LC+ E HL C + R + W + + W
Sbjct: 943 SWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQ 1002
Query: 938 HIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 786
S+ +++++ +Y++W +RN S + ++F + ++R
Sbjct: 1003 STAAAPSL--LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 1051
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 395 bits (1015), Expect(2) = e-119
Identities = 214/614 (34%), Positives = 327/614 (53%), Gaps = 41/614 (6%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
EES Q+SRV W GD+NT +FH + R+S N I L D G ++S I V
Sbjct: 208 EESFFHQRSRVSWFAEGDSNTHYFHRMVDSRKSFNTINSLVDSNGLLIDSQQGILDHCVT 267
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGP 2831
YY L G E + L ++++ ++ S TD+EI A ++ +K GP
Sbjct: 268 YYERLLGSIESPFSMEQEDMNLLLTYRCSQDQCSELEKSFTDDEIKAAFKSLPRNKTSGP 327
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DG+S FF+ W IIG + + AI F S +LL + NAT + L PK +NA T+++FRPI+
Sbjct: 328 DGYSVEFFRDTWSIIGPEVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPIS 387
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
C N +YK I+K+LT RL+ + ++ QS+F+ GRS+ +N++LA E++ Y+R N +
Sbjct: 388 CLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPR 447
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
+K+DL+KA+D ++ + + L PE++I WI CITT F+I VNG+ G+
Sbjct: 448 GMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRST 507
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+G+RQG PLSPYLFVL MEVF+ ++ + S HPK I+HL FADD+++F G
Sbjct: 508 KGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDG 567
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
+ S + + L F++ +GL VN KS +F + + D++ GF GT P+RYLG
Sbjct: 568 GSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGL-DLSERITSAAYGFPAGTFPIRYLG 626
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------------- 1811
LPL+ +L D PL++K+ +R++SW ++ L++AG +LI
Sbjct: 627 LPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPK 686
Query: 1810 ---------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWD 1694
K V W + P SEGGLG + N + LR IW
Sbjct: 687 GCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWV 746
Query: 1693 IMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNT 1514
+ ++W +W + + + FW + A W W+ +L+ RP+A KF+ +GNG
Sbjct: 747 LFDRDTSLWAQWQRHHRLGHASFWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNGGTV 806
Query: 1513 KLWKDNWLGHGSLM 1472
W D W G L+
Sbjct: 807 SFWFDCWTSLGPLI 820
Score = 65.5 bits (158), Expect(2) = e-119
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Frame = -3
Query: 3812 LMGDFNPCLYAHEKEGGNPVSTT---SMTALQGCLQDSQIFDCPYVGCFYTWSNRQDAES 3642
++GDFN L E NP S M CL + ++ D + G +TW N+
Sbjct: 1 MLGDFNQVLLPQEHS--NPPSLNIDRRMRDFGSCLSEMELSDLVFKGNSFTWWNKSSIRP 58
Query: 3641 RINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPRAYRFFITCTE 3462
I KLDR + N +W ++P S F N S H + + A+ + R ++FF +
Sbjct: 59 -IAKKLDRILANDSWCNLYPSSHGLFGNLDFSDHVSCGVVLEANGISAKRPFKFFNFLLK 117
Query: 3461 *DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQVVAAKAQLDT 3285
+DFL VV + W + V G+ M+ +LK +K + + + N+S + A L T
Sbjct: 118 NEDFLNVVMDNWFSTNVVGSSMYRVSKKLKAMKKPIKDFSRLNYSGIELRTKEAHELLIT 177
Query: 3284 TQSNLQLA 3261
Q NL LA
Sbjct: 178 CQ-NLTLA 184
Score = 70.5 bits (171), Expect = 9e-09
Identities = 38/171 (22%), Positives = 73/171 (42%)
Frame = -3
Query: 1298 CVEAGNTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLL 1119
CV+ + F T+ LR + K+W + +WF +P+H F W + L T+ +L+
Sbjct: 883 CVDDVDCQGFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQLNRLPTRQRLV 942
Query: 1118 SWGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVD 939
SWG+ C LC+ E HL C + R + W + + W
Sbjct: 943 SWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCTWAELLSWTRQ 1002
Query: 938 HIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 786
S+ +++++ +Y++W +RN S + ++F + ++R
Sbjct: 1003 STAAAPSL--LRKVVAQLVVYNLWRQRNLVLHSSLRVSCSVVFRLVDRELR 1051
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 318 bits (816), Expect(3) = e-118
Identities = 170/456 (37%), Positives = 261/456 (57%), Gaps = 1/456 (0%)
Frame = -1
Query: 3187 ESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVAY 3008
ES +Q+SR++WL GD NT+FFH ++ ++ N I L D+G R+ + +I +AY
Sbjct: 391 ESFFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAY 450
Query: 3007 YTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSV-TDNEIIHALSTIDSDKAPGP 2831
Y+ L G ++ + + L+ + + ++ ++ EI L ++ +KAPGP
Sbjct: 451 YSHLLGIPSENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKAPGP 510
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DGF FF W I+ + AI+ F S L NAT I+L PKVT A L FRP+A
Sbjct: 511 DGFPVEFFIEAWAIVKSSVVAAIREFFISGNLPRGFNATAITLIPKVTGADRLTQFRPVA 570
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
CC +YK I +I++ RLK + V Q FI GR + +N++LA EL+ N+ + T
Sbjct: 571 CCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADGETTR 630
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
+++D+ KAYD + + ++ +L + P FI WI +CI++ +SI NG G+ G+
Sbjct: 631 GCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGK 690
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+GIRQG P+S +LFVL+M+V + + + F+LHP C +ITHL FADD+LVF G
Sbjct: 691 KGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDG 750
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
A S + T L F +GL +N K+ + L + + S+ G G+LP+RYLG
Sbjct: 751 AASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLG 810
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG 1823
+PL+S ++ QD PLVD++ SR SW AR L++AG
Sbjct: 811 VPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAG 846
Score = 124 bits (311), Expect(3) = e-118
Identities = 85/263 (32%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Frame = -3
Query: 4025 ELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNG-PWFIATFVYAHNSETQREDLWSNI 3849
ELGRIW++WD S+ + Q + S+ I + F FVY NSE R LW +I
Sbjct: 108 ELGRIWIVWDPSI-SVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDI 166
Query: 3848 KCFSESNTL---PWCLMGDFNPCLYAHEKEGGNP--VSTTSMTALQGCLQDSQIFDCPYV 3684
S ++ L PW L+GDFN A E N ++ M LQ CL+DSQ+ D P
Sbjct: 167 LVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSR 226
Query: 3683 GCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRG 3504
G F+TWSN Q ++ I KLDR++ N W VFP ++ F G S H+P I+ +
Sbjct: 227 GVFFTWSNHQQ-DNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPP 285
Query: 3503 NGPRAYRFFITCTE*DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSN 3327
+++++F + +L + AW + G+ MF LK K + FSN
Sbjct: 286 PSKKSFKYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSN 345
Query: 3326 FGDQVVAAKAQLDTTQSNLQLAP 3258
+ + +L+ Q L +P
Sbjct: 346 IQQRTAQSLTRLEDIQVELLTSP 368
Score = 33.9 bits (76), Expect(3) = e-118
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = -1
Query: 4189 GFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
G N + ++++I NN+ + +ET V ++N + +LAS P W+ N
Sbjct: 53 GLNSRNRQRVVRSWIASNNLLVGCFLETHVAQENANSVLASTLPGWRMDSN 103
Score = 89.4 bits (220), Expect(2) = 3e-24
Identities = 51/168 (30%), Positives = 76/168 (45%)
Frame = -3
Query: 1280 TGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEV 1101
+ F DT++ L+ WHK +WF +P+ FI WV L T+ +L WG +
Sbjct: 965 SNRFSTADTWSYLQPSSTSVLWHKAVWFKDHVPKQAFICWVVAHNRLHTRDRLRRWGFSI 1024
Query: 1100 DPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGN 921
P C+LCN + E HLFF C + + + W + + N
Sbjct: 1025 PPTCVLCNDLDESREHLFFRCQFSSEIWSFFMRALNLNP--PPQFMHCLLWTLTASRDRN 1082
Query: 920 SIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRL 777
I I +L+F+A +Y +W ERN R S PA L+ ++ VR RL
Sbjct: 1083 -ITLITKLLFHASVYFIWRERNLRIHSNSVRPAHLIIKEIQLIVRARL 1129
Score = 53.5 bits (127), Expect(2) = 3e-24
Identities = 23/73 (31%), Positives = 37/73 (50%)
Frame = -1
Query: 1597 SWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSDHHLDAR 1418
+W WR++ RP A F++ +G+G W DNW HG L+ + P + L++
Sbjct: 852 NWIWRKLCKLRPFARPFIICEVGSGVTASFWHDNWTDHGPLLHLTGPAGPLLAGLPLNSV 911
Query: 1417 VSSCLVEGTWNLS 1379
V L + TW +S
Sbjct: 912 VRDALRDDTWRIS 924
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 355 bits (910), Expect(2) = e-116
Identities = 173/457 (37%), Positives = 283/457 (61%), Gaps = 1/457 (0%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
EE KQ+S++ WL++GD N K FH ++ R ++N I + +G+ + + +I E
Sbjct: 241 EEKFLKQRSKLHWLDIGDRNNKAFHRAVVAREAQNSIREIICHDGSVASQEEKIKTEAEH 300
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIH-ALSTIDSDKAPG 2834
++ E + + L+ + ++M+ + E IH + ++ +DK+PG
Sbjct: 301 HFREFLQLIPNDFEGIAVEELQDLLPYRCSDSDKEMLTNHVSAEEIHKVVFSMPNDKSPG 360
Query: 2833 PDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPI 2654
PDG++A F+K W IIG +FI AI+S F+ L +N+T+++L PK A + D+RPI
Sbjct: 361 PDGYTAEFYKGAWNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPI 420
Query: 2653 ACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGAT 2474
+CCNV+YK I+KI+ RLK V K + QS+F+ R + +N++LA E++++YH+++ ++
Sbjct: 421 SCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSS 480
Query: 2473 ICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHG 2294
CA+KID+ KA+D ++ ++ +L NFP +F WI +CITT FS+ VNG G
Sbjct: 481 RCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSS 540
Query: 2293 RRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMK 2114
R +RQGC LSPYLFV+ M+V + ++ K V +RQF HPKC+ +THL FADDL++
Sbjct: 541 ARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSD 600
Query: 2113 GDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYL 1934
G RS + + L F+ +GL ++ KS ++L+ V I F+VG LP+RYL
Sbjct: 601 GKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYL 660
Query: 1933 GLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG 1823
GLPL+S RL+ DC+PL+++++ +I++W +R L++AG
Sbjct: 661 GLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAG 697
Score = 96.7 bits (239), Expect(2) = e-116
Identities = 72/233 (30%), Positives = 110/233 (47%), Gaps = 12/233 (5%)
Frame = -3
Query: 3875 QREDLWSNIKCFSESNTL---PWCLMGDFNPCL--YAHEKEGGNPVSTTSMTALQGCLQD 3711
+R++LW++++ S+S + PW + GDFN L H NPV+TT M Q +
Sbjct: 3 ERKELWNDLRDHSDSPIIRSKPWIIFGDFNEILDMEEHSNSRENPVTTTGMRDFQMAVNH 62
Query: 3710 SQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPM 3531
I D Y G +TWSN+++ I KLDR ++N WL+ FP S + F G S H
Sbjct: 63 CSITDLAYHGPLFTWSNKRE-NDLIAKKLDRVLVNDVWLQSFPRSYSVFEAGGCSDHLRC 121
Query: 3530 IMSVFADRG---NGPRAYRFFITCTE*DDFLKVVEEAWN----IPVQGTPMFIFVTRLKN 3372
+++ G G R ++F TE + F+ VE WN I + + +F F +LK
Sbjct: 122 RINLNVGAGAVVKGKRPFKFVNVITEMEHFIPTVESYWNETEAIFMSTSSLFRFSKKLKG 181
Query: 3371 VKDNLILWKKNNFSNFGDQVVAAKAQLDTTQSNLQLAPLCQASINNERTAIKK 3213
+K L K N Q A L Q+ +++A +S+ E A K
Sbjct: 182 LKPLLRNLGKERLGNLVKQTKEAFETLCQKQA-MKMANPSPSSMQEENEAYAK 233
Score = 79.3 bits (194), Expect = 2e-11
Identities = 47/158 (29%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Frame = -3
Query: 1235 KEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPVCILCNIMLEDDY 1056
K K+ WHK +WF H P+H F VW+++ L T ++ W ++ C+LCN LE
Sbjct: 755 KPKKEAWHKGVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRD 814
Query: 1055 HLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDW----CVDHIKGGNSIGTIKRLMFN 888
HLFFSC+Y + DW I + C D + + R +
Sbjct: 815 HLFFSCAY-TSGIWEALAKNLLQRSYTTDWQTIISYVSGQCHDRVS-----CFLARSVLQ 868
Query: 887 AFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLA 774
A +Y +W ERN R + PA L + + +R L+
Sbjct: 869 ASVYTIWRERNGRRHGETPNPAARLIQWIDKHIRNMLS 906
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 427 bits (1099), Expect = e-116
Identities = 220/616 (35%), Positives = 340/616 (55%), Gaps = 43/616 (6%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
EE KQ+S++ W ++GD NTK FH + R + N I + ++G EI AE
Sbjct: 353 EEKYLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAER 412
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNI-VTEEEGRKMVDSVTDNEIIHALSTIDSDKAPG 2834
++ E + + L+ + ++ + + ++ VT EI L + SDK+PG
Sbjct: 413 FFREFLQLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPG 472
Query: 2833 PDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPI 2654
PDG+++ FFK+ W IIG +F A++S F+ L +N+T+++L PK T A + D+RPI
Sbjct: 473 PDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPI 532
Query: 2653 ACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGAT 2474
+CCNV+YK I+KI+ RLK V K ++ QS+F+ R + +N++LA EL+++YH++ +T
Sbjct: 533 SCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTIST 592
Query: 2473 ICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHG 2294
CAIKID+ KA+D ++ ++ + T FP +FI WI +CITT FS+ VNG GY
Sbjct: 593 RCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQS 652
Query: 2293 RRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMK 2114
RG+RQGC LSPYLFV+ M+V + ++ K A+R F HPKCK +THL FADDL+V
Sbjct: 653 SRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSD 712
Query: 2113 GDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYL 1934
G RS + F+ +GL ++ KS ++L+ + + F G LP+RYL
Sbjct: 713 GKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYL 772
Query: 1933 GLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYA------------------------ 1826
GLPL++ RLS DC+PL+++V+ RI SW +R L+YA
Sbjct: 773 GLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRLP 832
Query: 1825 -----------------GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIW 1697
G E+ + + W P EGGLG++ + N L+ +W
Sbjct: 833 RKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLVW 892
Query: 1696 DIMSSKNTIWVRWVQDNLIKAQDFWYLK-APTDSSWCWRRILDHRPIATKFVLHLIGNGD 1520
I+S N++WV+WV +L++ FW +K + SW W+++L +R +A +GNG
Sbjct: 893 KIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNGK 952
Query: 1519 NTKLWKDNWLGHGSLM 1472
T W DNW G L+
Sbjct: 953 QTSFWYDNWSDLGQLL 968
Score = 104 bits (260), Expect(2) = 2e-25
Identities = 89/340 (26%), Positives = 156/340 (45%), Gaps = 25/340 (7%)
Frame = -3
Query: 4037 HSHHELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNGP-WFIATFVYAHNSETQREDL 3861
+ H+ GRIWV+W +V + + I S Q +T SV +++ F +FVYA N +R+ L
Sbjct: 61 YEHNRRGRIWVLWRKNV-RLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVL 119
Query: 3860 WSNIKCFSESNTL---PWCLMGDFNPCL--YAHEKEGGNPVSTTSMTALQGCLQDSQIFD 3696
WS +K +S + PW L+GDFN L H + +P+ T M Q + + D
Sbjct: 120 WSELKDHYDSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTD 179
Query: 3695 CPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVF 3516
G +TW N+++ I KLDR +IN W + F S + F G S H +S+
Sbjct: 180 MAAQGPLFTWCNKRE-HGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLN 238
Query: 3515 ADRGN---GPRAYRFFITCTE*DDFLKVVEEAWN----IPVQGTPMFIFVTRLKNVKDNL 3357
++ GN G + ++F T+ +DF +V W + + + +F F LK +K +
Sbjct: 239 SEAGNKVQGLKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKI 298
Query: 3356 ILWKKNNFSNFGD------QVVAAKAQLD-TTQSNLQLAPLCQASINNERTAI---KKLH 3207
++ N +++ AK ++ T S++ + A +R AI K L
Sbjct: 299 RSMARDRLGNLSKKANEAYKILCAKQHVNLTNPSSMAMEEENAAYSRWDRVAILEEKYLK 358
Query: 3206 QESQTR--RIDEEATIESPMAGVRGQQHQVFPQLYKGEEV 3093
Q+S+ ++ ++ T A + H ++ + +
Sbjct: 359 QKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGI 398
Score = 42.0 bits (97), Expect(2) = 2e-25
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = -1
Query: 4201 WNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHFDN 4037
WN+ G N KH +K +I +NN + +VETRV+E +++ + W N
Sbjct: 6 WNVRGLNKSSKHSVIKKWIEENNFQFGCLVETRVKESKVSQLVGKLFKDWSILTN 60
Score = 79.7 bits (195), Expect = 2e-11
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Frame = -3
Query: 1271 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1092
F +DT++ R + WHK+IWF H P++ F W++ L T ++++W +
Sbjct: 1038 FSTRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATD 1097
Query: 1091 CILCNIMLEDDYHLFFSCSYP----------VFXXXXXXXXXXXRDVIAQDWDKQIDWCV 942
CI C LE HLFF+CS+ +F + I +++W
Sbjct: 1098 CIFCQGTLETRDHLFFTCSFTSVIWVDLARGIFKTQYTSHWQSIIEAITNSQHHRVEW-- 1155
Query: 941 DHIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLAT 771
++R +F A IY VW ERN R + A L + + +R +L++
Sbjct: 1156 ----------FLRRYVFQATIYIVWRERNGRRHGEPPNTASQLVGWIDKQIRNQLSS 1202
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 420 bits (1080), Expect = e-114
Identities = 231/681 (33%), Positives = 371/681 (54%), Gaps = 55/681 (8%)
Frame = -1
Query: 3343 RIISLISETKLSQLKLS*TRHRVTYS*LLCVKLQSTTRGRQLKNYTKK---------ARQ 3191
+I+S ++ + + + R R + + C+++ + + K ++ A Q
Sbjct: 14 QILSFLNTKEAALTSILSKRWRYLIAFVSCIEIDDSANKPKRKGNRQRFMDFVDRVLALQ 73
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
+S K+ S ++GD N K FH +I R + N I + +G + S +I E V
Sbjct: 74 GDSPNKKFSLKCQTDVGDRNNKTFHRAITTREAVNSIREIVTRDGLVVTSQQDIQTEAVN 133
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIV----TEEEGRKMVDSVTDNEIIHALSTIDSDK 2843
Y+ + F Y+ ++ L N++ +E++ R + VT EI + ++ DK
Sbjct: 134 YFQD-FLQTIPADYEGMCVEE--LENLLPFRCSEDDHRLLTRVVTGEEIKKVIFSMPKDK 190
Query: 2842 APGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDF 2663
+PGPDG+++ F+K+ W IIG + I AI+S F+ L VN+T+++L PK A + D+
Sbjct: 191 SPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDY 250
Query: 2662 RPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNN 2483
RPI+CCNV+YK I+KIL RLK + K + QS+F+ R + +N++LA EL+++YH+++
Sbjct: 251 RPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDS 310
Query: 2482 GATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGY 2303
+T CA+KID+ KA+D ++ + +L NFP +FI WI +C++T FSI VNG GY
Sbjct: 311 ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGY 370
Query: 2302 IHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLV 2123
RG+RQGC LSPYLFV+ M+V + ++ K +R+F HP+CK +THLCFADDL++
Sbjct: 371 FRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMI 430
Query: 2122 FMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPM 1943
G RS + + L F+ + GL + K+ ++L+ V D + + F VG LP+
Sbjct: 431 LTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPV 490
Query: 1942 RYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYA--------------------- 1826
RYLGLPL++ RL+ D PL+D+++ RI W +R L++A
Sbjct: 491 RYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAF 550
Query: 1825 --------------------GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLR 1706
G EL K+ V W P EGGLG++ + N +L+
Sbjct: 551 RLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREANKVSSLK 610
Query: 1705 HIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKA-PTDSSWCWRRILDHRPIATKFVLHLIG 1529
IW ++S ++++WV+W + NL+K + FW + T SW WRR+L HR +A F +
Sbjct: 611 LIWRLLSCQDSLWVKWTRMNLLKKESFWSIGTHSTLGSWIWRRLLKHREVAKSFCKIEVN 670
Query: 1528 NGDNTKLWKDNWLGHGSLMGM 1466
NG NT W DNW G L+ +
Sbjct: 671 NGVNTSFWFDNWSEKGPLINL 691
Score = 90.1 bits (222), Expect = 1e-14
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Frame = -3
Query: 1337 REYSNRSLNL*HGCVEAGNT----GEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCF 1170
++Y +R++ L + G F KDT+N +R ++ WHK +WF H P+ F
Sbjct: 734 QKYQHRNIELEDAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSF 793
Query: 1169 IVWVSLQRGLKTKFKLLSWGMEVDPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXX 990
W++++ L T ++++W C+ C+ +E HLFF C Y
Sbjct: 794 CAWLAIRNRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYS-SEIWTSIAKNVY 852
Query: 989 RDVIAQDWDKQIDWCVDHIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLF 810
+D + W +++ D + + R F I+ +W ERN R +KS A L
Sbjct: 853 KDRFSTKWSAVVNYISDS-QPDRIQSFLSRYTFQVSIHSIWRERNSRRHGEKSRSASNLI 911
Query: 809 LKMIEDVRLRLATCK 765
++ + +R +L+T K
Sbjct: 912 RQIDKTIRNQLSTIK 926
>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
lycopersicum]
Length = 1333
Score = 268 bits (686), Expect(3) = e-114
Identities = 188/656 (28%), Positives = 310/656 (47%), Gaps = 45/656 (6%)
Frame = -1
Query: 3211 YTKKARQEESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAE 3032
Y K ++ E + +Q++++ WL+ GD NTK+FH I+ +R+R I L D+ GN + + E
Sbjct: 277 YIKFSKMEYKILQQKTQLHWLQEGDANTKYFHTVIRGKRNRMSIHKLMDESGNWIKGEEE 336
Query: 3031 ISAEYVAYYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTD-NEIIHALSTI 2855
I+ YY ++F N + + D + +N + +E K +D + D +E+ + ++
Sbjct: 337 IAKHACDYYEKIFTGMNGKIKE----DILQCINPMITQEQNKDLDRIPDMDELRRTIMSM 392
Query: 2854 DSDKAPGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATT 2675
+ APGPDGF F++ C+ II D + A+K + + + ++L PK+ +
Sbjct: 393 NPHSAPGPDGFGGKFYQVCFDIIKEDLLAAVKHFYVGNIMPRYLTHACLTLIPKIDHPCR 452
Query: 2674 LNDFRPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNY 2495
L DFRPI+ N K I+KIL+ RL + +VS QS F+ GRSI +NI+LA E+
Sbjct: 453 LKDFRPISLSNFTNKIISKILSTRLALILPSIVSANQSGFVKGRSIAENILLAQEIFHGI 512
Query: 2494 HRNNGATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGS 2315
+ + IK+D+ KAYD + + +L K F E FI + ++ +SI++NG
Sbjct: 513 KKPKDGSNVVIKLDMVKAYDRVSWNYTCLVLRKMGFSEVFIDRVWRIMSNNWYSIVINGK 572
Query: 2314 AYGYIHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQF-SLHPKCKIHVITHLCFA 2138
+G+ +RG++QG PLSP LFVL E+ + + + Q+ H + K I HL FA
Sbjct: 573 RHGFFQSKRGLKQGDPLSPALFVLGAEILSRQLNLLYQNHQYKGFHMERKGPKINHLSFA 632
Query: 2137 DDLLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVD--DITSYSIKYVPGF 1964
DD+++F D S + + + + + VN KS +++ DI IK GF
Sbjct: 633 DDIIIFTSTDTNSIHIIMKTIELYEAVSDQQVNKEKSFFMVTANTGYDIIE-EIKTATGF 691
Query: 1963 EVGTLPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAGIELIYKQ------ 1802
P+ YLG PL S LV+KV +I W ++ L + G ++ K
Sbjct: 692 NRKNSPINYLGCPLYSGGQRIIYYSELVEKVIKKISGWHSKLLNFGGKIILVKHVLQSIP 751
Query: 1801 ---------PSV--------------------------KWTNFFHPMSEGGLGIKCISTT 1727
P W N +P SEGG+G++ +
Sbjct: 752 IHTLAAISPPKTTLNCIKKLIADFFWGIDKDGKTYHWSSWENMAYPTSEGGIGVRLLEDV 811
Query: 1726 NIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKF 1547
A + WD +KN++W +++Q + + K T S WR + +R F
Sbjct: 812 CTAFQYKQWWD-FRTKNSLWSQFLQAKYCQRANPVAKKYDTGDSLIWRYLTRNRLKVESF 870
Query: 1546 VLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSDHHLDARVSSCLVEGTWNLS 1379
+ I +G W DNWL +L Q + S + ++ V+ L +G WN S
Sbjct: 871 IKWNITSG-TCSFWWDNWLDIENLAS----QNEHISSLN-NSVVADFLKDGKWNES 920
Score = 121 bits (303), Expect(3) = e-114
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 1/236 (0%)
Frame = -3
Query: 4016 RIWVIWDGSVVKANYISSSAQHITVSVSIQN-GPWFIATFVYAHNSETQREDLWSNIKCF 3840
+IW+ W + + + S Q +T VS + FI T+VYA + R+ LW +
Sbjct: 11 KIWLFWSNDIT-CDILESDQQQVTCEVSHEKCSEKFIITYVYAKCKDQLRKPLWDIMLKR 69
Query: 3839 SESNTLPWCLMGDFNPCLYAHEKEGGNPVSTTSMTALQGCLQDSQIFDCPYVGCFYTWSN 3660
SE+ PW ++GDFN EK GG + ++ + D Y G YTW N
Sbjct: 70 SET-MYPWSIIGDFNVITSTSEKLGGRDYNINKSLEFINIIEACGLVDMGYHGQDYTWCN 128
Query: 3659 RQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPRAYRF 3480
+ +RI +LDR + N W+E P S S S H P++M + + N + ++F
Sbjct: 129 HRKDGARIWKRLDRGMTNDKWIETIPHSSITHLPSVGSDHCPLLMEICDIQSNTIKYFKF 188
Query: 3479 FITCTE*DDFLKVVEEAWNIPVQGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQV 3312
TE D FL+ VE+ W V G PM+ F T+L+ + L +W K + + ++V
Sbjct: 189 LNCWTENDSFLETVEKCWKRDVIGNPMWNFHTKLRRLTKTLRIWSKQEYGDVFEKV 244
Score = 73.9 bits (180), Expect(3) = e-114
Identities = 66/336 (19%), Positives = 138/336 (41%), Gaps = 4/336 (1%)
Frame = -3
Query: 1280 TGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEV 1101
TG F + + +R K + +IW H + F +W +L+ L T L G ++
Sbjct: 956 TGIFSIASAWECIRKKRIIDNISTIIWHKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDI 1015
Query: 1100 DPVCILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGN 921
+D H+ + ++ + V + + W + N
Sbjct: 1016 SDYSCCYRKGKDDINHILINGNFAKYIWKIHAATLGIIPVNTTLRAQLLHWRNQQVN--N 1073
Query: 920 SIGTIK-RLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCKVYVP-DN 747
+ + ++ N +++W R + +K + + ++V + +P +
Sbjct: 1074 EVHKLLIHILPNIICWNLWKNRCAVKYGKKRSSIHRVKYGIFKEVMQVIKLVFPSIPWQS 1133
Query: 746 N*SRSLTAKIRCHTEFFLPVQKAISWQKPEVGDVAVNTDGSLSDDGA--GFGAIIRDEHG 573
N + + C ++ + + +SW KP +G +NTDGS + G G +RD G
Sbjct: 1134 NWNNLVNIIEHCSQQYKIVL---VSWNKPALGTYKLNTDGSAIQNSGKIGGGGNLRDFQG 1190
Query: 572 TALSAVEGSSGPSSITLHELQGIEAGLKLAILNGHSRISLKSDSKTSLSYLKEDGSKPPW 393
+ A G + E++ G++ +G+ ++ L+ +S+ +++K +K PW
Sbjct: 1191 KIVYAFSIPFGVGTNNFAEIKAALYGMEWCEQHGYKKVELEVNSELLYNWIKNT-TKIPW 1249
Query: 392 TCHHVWESIKRLRMQFEKCSHSHNYREVNGAADLLA 285
+ + I+++ M+ E+ H YRE N ADLL+
Sbjct: 1250 RYEDLVQQIQQISMKMEQFHCHHIYREANNTADLLS 1285
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 419 bits (1076), Expect = e-113
Identities = 228/614 (37%), Positives = 336/614 (54%), Gaps = 43/614 (7%)
Frame = -1
Query: 3187 ESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVAY 3008
E + K++SRVQWL+ GD N+ FF ++ + R+RNRI + +G L
Sbjct: 219 EKLLKKKSRVQWLKKGDKNSTFFFKTMTKHRNRNRIATINRSDGPDL------------- 265
Query: 3007 YTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGPD 2828
+ + + T ++I +++ +K+PGPD
Sbjct: 266 -------------------------------AKSLCNEFTHDDIRAVFFSMNPNKSPGPD 294
Query: 2827 GFSAHFFKSCWRIIGGDFIKA-IKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
GF+ FF+ W +IG + + A +K FS LL E+N+T+I+L PKV N TT++DFRPI+
Sbjct: 295 GFNGCFFQKAWLVIGDNVVAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPIS 354
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
CCN YK IAK+L RLK +V P QS+FI GR I DNI+LA E++ +YH+ +G
Sbjct: 355 CCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPR 414
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
C +D+ KA D + D I+ L FN P I WIK CI++ KFS+ VNG G+ R
Sbjct: 415 CTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARR 474
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQV-ASRQFSLHPKCKIHVITHLCFADDLLVFMK 2114
RG+RQG PLSPYLFV+ MEV + + +++ S F H +C ++HLCFADDLL+F
Sbjct: 475 RGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCN 534
Query: 2113 GDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYL 1934
GD S +L A ++F + + L N +S IFL+ VD +S S+ V F +GT P+RYL
Sbjct: 535 GDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYL 594
Query: 1933 GLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELIYKQPS------------- 1796
G+PL++++L QDC PL+D++++RI+SW+ + L++AG ++LI S
Sbjct: 595 GIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASHLILP 654
Query: 1795 ---------------------------VKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIW 1697
V W+ P EGGLGIK + N A+ + HIW
Sbjct: 655 KKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMISHIW 714
Query: 1696 DIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDN 1517
+++SS + W WV+ L+K FW P+ SW WR++L R + F +++IG+G
Sbjct: 715 NLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIGDGRA 774
Query: 1516 TKLWKDNWLGHGSL 1475
T LW DNW G L
Sbjct: 775 TSLWFDNWHPLGPL 788
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 383 bits (984), Expect(2) = e-109
Identities = 220/616 (35%), Positives = 334/616 (54%), Gaps = 45/616 (7%)
Frame = -1
Query: 2962 NAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGPDGFSAHFFKSCWRIIG 2783
+A DQ L VT EE +K+ L + S+K PGPDG+++ FFK+ W I G
Sbjct: 15 SATDQDMLTREVTSEENQKV------------LFAMPSNKFPGPDGYTSEFFKATWSITG 62
Query: 2782 GDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIACCNVMYKCIAKILTVR 2603
DFI AIKS F L +NAT+++L PK AT + D+RPI+CCNV+YK I+KI+ R
Sbjct: 63 QDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANR 122
Query: 2602 LKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATICAIKIDLRKAYDCIR* 2423
LK + + QS+F+ R + +N++LA EL+++YH+++ + CA+KID+ KA+D ++
Sbjct: 123 LKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQW 182
Query: 2422 DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGRRGIRQGCPLSPYLFVL 2243
+L L NFPE F WIK+CI+T FS+ VNG G+ +RG+RQGC LSPYLFV+
Sbjct: 183 QFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVI 242
Query: 2242 LMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKGDARSANSLATALTSFS 2063
M V + ++ R HPKCK +THLCFADDL+VF+ G RS + F+
Sbjct: 243 CMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFA 302
Query: 2062 NRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLGLPLLSTRLSHQDCIPL 1883
++GL ++ KS ++L+ V ++ +I F G LP+RYLGLPLL+ +++ D PL
Sbjct: 303 GKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPL 362
Query: 1882 VDKVKSRIQSWKARDLAYA----------------------------------------- 1826
+DKV+S+I SW AR L+YA
Sbjct: 363 LDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWS 422
Query: 1825 GIELIYKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWDIMSSKNTIWVRWVQDN 1646
G EL K+ + WT+ EGGLGIK + N L+ IW ++S ++++WV WV
Sbjct: 423 GPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTY 482
Query: 1645 LIKAQDFWYLKAPTD-SSWCWRRILDHRPIATKFVLHLIGNGDNTKLWKDNWLGHGSLMG 1469
+I+ FW + SW W+++L +R +A I +G +T W DNW G L+
Sbjct: 483 IIRKGSFWSANDRSSLGSWMWKKLLKYRDVAKSMCKVEIKSGSSTSFWYDNWSQLGQLVD 542
Query: 1468 MFPPQMQFDSDHHLDARVSSCLVEGTWNLSPNLKNALGNFV-TEVESI--QTDHLICDMV 1298
+ + D L A V++ L + + + + A+ N + E++SI + D+
Sbjct: 543 VTNARRTIDMGIPLAATVATVLAS---HRTKHHRTAIYNKIEAEIQSILQRERSGAPDIF 599
Query: 1297 VWRLATRGNFSSRILT 1250
+WR ++ NF +T
Sbjct: 600 LWR-SSGDNFRQSFIT 614
Score = 43.9 bits (102), Expect(2) = e-109
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 16/98 (16%)
Frame = -3
Query: 1271 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1092
F K T++ +R ++W+K +WF + P++ F++W+++ L T ++ W
Sbjct: 612 FITKVTWHNIRVIHTHRQWYKGVWFSYNTPKYSFLLWLAIHDRLSTGDRIKKWNSGQQTF 671
Query: 1091 ---------------CILCNIMLEDDY-HLFFSCSYPV 1026
CI CN M+ Y +F S S P+
Sbjct: 672 STPLSIFTLKFLRNRCIFCNNMISKFYLTIFDSLSKPI 709
>ref|XP_007031312.1| Uncharacterized protein TCM_016762 [Theobroma cacao]
gi|508710341|gb|EOY02238.1| Uncharacterized protein
TCM_016762 [Theobroma cacao]
Length = 2214
Score = 282 bits (721), Expect(3) = e-109
Identities = 203/700 (29%), Positives = 324/700 (46%), Gaps = 47/700 (6%)
Frame = -1
Query: 3217 KNYTKKARQ---EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRL 3047
K Y K RQ EE +Q+S V+WL G+ NTKFFH ++++R RN I + D EGN L
Sbjct: 1170 KAYAKLNRQLSIEELFWQQKSGVKWLVEGERNTKFFHMRMRKKRMRNHIFRIQDQEGNVL 1229
Query: 3046 NSDAEISAEYVAYYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHA 2867
I V ++ L D + +D I++ + + + + E+ A
Sbjct: 1230 EEPHLIQNSGVEFFQNLLKAEQ---CDISRFDPSITPRIISTTDNEFLCATPSLQEVKEA 1286
Query: 2866 LSTIDSDKAPGPDGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVT 2687
+ I+ D GPDGFS+ F++ CW II D +A+ F + L + +T + L PK
Sbjct: 1287 VFNINKDSVAGPDGFSSLFYQHCWDIIKQDLFEAVLDFFKGSPLPRGITSTTLVLLPKTQ 1346
Query: 2686 NATTLNDFRPIACCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHEL 2507
N + ++FRPI+ C V+ K + K+L RL + ++S QS F++GR I DNI+LA EL
Sbjct: 1347 NVSQWSEFRPISLCTVLNKIVTKLLANRLSKILPSIISENQSGFVNGRLISDNILLAQEL 1406
Query: 2506 LRNYHRNNGATICAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIM 2327
+ + + +K+D+ KAYD + + + M+ +F F +I IK CI+ FS++
Sbjct: 1407 VDKINARSRGGNVVLKLDMAKAYDRLNWEFLYLMMEQFGFNALWINMIKACISNCWFSLL 1466
Query: 2326 VNGSAYGYIHGRRGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLH--PKCKIHVIT 2153
+NGS GY RG+RQG +SP LF+L E + S L Q+ SR SLH C + V +
Sbjct: 1467 INGSLVGYFKSERGLRQGDSISPSLFILAAE-YLSRGLNQLFSRYNSLHYLSGCSMSV-S 1524
Query: 2152 HLCFADDLLVFMKGDARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYS-IKY 1976
HL FADD+++F G + + L + +G VNH+KS ++ ++ I
Sbjct: 1525 HLAFADDIVIFTNGCHSALQKILVFLQEYEQVSGQQVNHQKSCFITANGCPLSRRQIIAQ 1584
Query: 1975 VPGFEVGTLPMRYLGLPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG--------- 1823
V GF+ TLP+ YLG PL L+ K++ RI W+ + L+
Sbjct: 1585 VTGFQHKTLPVTYLGAPLHKGPKKVFLFDSLISKIRDRISGWENKILSPGSRITLLRSVL 1644
Query: 1822 ------IELIYKQPSV--------------------------KWTNFFHPMSEGGLGIKC 1739
+ + K P++ W P SEGGL I+
Sbjct: 1645 SSLPMYLLQVLKPPAIVIEKIERLFNSFLWGDSNEGKRMHWAAWNKINFPCSEGGLDIRN 1704
Query: 1738 ISTTNIAVNLRHIWDIMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPI 1559
+ A L+ +W + +++W +++ + Y++ SS W+RI R +
Sbjct: 1705 LKDVFDAFTLK-LWWRFYTCDSLWTLFLKTKYCLGRIPHYVQPKIHSSSIWKRITGGRDV 1763
Query: 1558 ATKFVLHLIGNGDNTKLWKDNWLGHGSLMGMFPPQMQFDSDHHLDARVSSCLVEGTWNLS 1379
+ IG G+ W D W+G L+ FP F +D V +W++
Sbjct: 1764 TIQNTRWKIGRGE-LFFWHDCWMGDQPLVISFP---SFRNDMSF---VHKFYKGDSWDVD 1816
Query: 1378 PNLKNALGNFVTEVESIQTDHLICDMVVWRLATRGNFSSR 1259
N + E+ I D D+ W L + G FS++
Sbjct: 1817 KLRLFLPVNLIYEILLIPFDRTQQDVAYWTLTSNGEFSTK 1856
Score = 113 bits (283), Expect(3) = e-109
Identities = 66/232 (28%), Positives = 111/232 (47%)
Frame = -3
Query: 3953 HITVSVSIQNGPWFIATFVYAHNSETQREDLWSNIKCFSESNTLPWCLMGDFNPCLYAHE 3774
H+ +S+ P F +FVYA + +R +LW++++ S+ PW + GDFN + E
Sbjct: 935 HVKLSLPWLPHPVF-TSFVYAKCTRIERRELWTSLRIISDGMQAPWLVGGDFNSIVSCDE 993
Query: 3773 KEGGNPVSTTSMTALQGCLQDSQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWL 3594
+ G SM L L D + D + G +TW+N +R+ +LDR + N W
Sbjct: 994 RLNGAIPHDGSMEDLSSTLFDCGLLDAGFEGNSFTWTN-----NRMFQRLDRVVYNQEWA 1048
Query: 3593 EVFPDSVTDFCNSGISVHSPMIMSVFADRGNGPRAYRFFITCTE*DDFLKVVEEAWNIPV 3414
E F + N S H P+++S GP +RF T+ DF+ VE++WN P+
Sbjct: 1049 EFFSSTRVQHLNRDGSDHCPLLISCSNTNQRGPATFRFLHAWTKHHDFISFVEKSWNTPI 1108
Query: 3413 QGTPMFIFVTRLKNVKDNLILWKKNNFSNFGDQVVAAKAQLDTTQSNLQLAP 3258
+ F T+ + +K +L W K+ F + + A+ + + + N Q P
Sbjct: 1109 HAEGLNAFWTKQQRLKRDLKWWNKHIFGDIFKILRLAEVEAEQRELNFQQNP 1160
Score = 53.1 bits (126), Expect(3) = e-109
Identities = 68/342 (19%), Positives = 133/342 (38%), Gaps = 8/342 (2%)
Frame = -3
Query: 1283 NTGEFFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGME 1104
+ GEF K + +R ++ LIW F +W +L + + ++ G+
Sbjct: 1849 SNGEFSTKSAWETIRQQQSHNTLGSLIWHRSIPLSISFFIWRALNNWIPVELRMKGKGIH 1908
Query: 1103 VDPVCILCNIMLEDDYHLFFSCS-----YPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVD 939
+ C+ CN E H+ + S + F + V W + D
Sbjct: 1909 LASKCVCCN-SEESLMHVLWGNSVAKQVWAFFAKFFQIYVLNPKHVSHILW--AWFYSGD 1965
Query: 938 HIKGGNSIGTIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVRLRLATCKVY 759
++K G+ I+ L+ + +W ERN + + + ++++ +R +
Sbjct: 1966 YVKRGH----IRTLLPIFICWFLWLERNDAKYRHSGLNTDRIVWRIMKLLRQLKDGSLLQ 2021
Query: 758 VPDNN*SRSLTAKIRCHTEFFLPV-QKAISWQKPEVGDVAVNTDG-SLSDDGAGFGAIIR 585
+ A + + + L + + W+KP G+ +N DG S A G ++R
Sbjct: 2022 QWQWKGDTDIAAMWQYNFQLKLRAPPQIVYWRKPSTGEYKLNVDGSSRHGQHAASGGVLR 2081
Query: 584 DEHGTALSAVEGSSGPSSITLHELQGIEAGLKLAILNGHSRISLKSDSKTSLSYLKEDGS 405
D G + + G + EL+ + GL L ++ ++ D+ ++ L
Sbjct: 2082 DHTGKLIFGFSENIGTCNSLQAELRALLRGLLLCKERHIEKLWIEMDALAAIQLLPH-SQ 2140
Query: 404 KPPWTCHHVWESIKR-LRMQFEKCSHSHNYREVNGAADLLAS 282
K ++ ESI++ L + SH H RE N AD L++
Sbjct: 2141 KGSHDIRYLLESIRKCLNSISYRISHIH--REGNQVADFLSN 2180
Score = 60.5 bits (145), Expect(2) = 9e-08
Identities = 45/161 (27%), Positives = 70/161 (43%)
Frame = -3
Query: 5378 PVMVDGNLSASIKKDDFSELVNEYEGLVVGGFIGHRLPYGLVKRTVEKAWKIKGSLEMTV 5199
P + +A +D+ L + +VG F R+P R+ K + G+ E+
Sbjct: 76 PAVYKDRPAAVFYEDEICILAKPFSLCLVGKFT--RMPKLQEVRSAFKGIGLSGAYEIKW 133
Query: 5198 HGARPYIMKFSLEEDRITALEHGPVFMSNVPFFVRAWKPYIEQELENIEAVPVWMILRGV 5019
+ ++ S ++D F+ + W P E E E+ VPVW+ +
Sbjct: 134 LDYKHVLIHLSNDQDFNRIWTRQQWFIVGQKMRIFKWSPEFEAEKES-PVVPVWISFPNL 192
Query: 5018 PLHLFNPKGLSIIMSVIGKPLLVDGPTAARTRMAYARVCVE 4896
HL+ L +I IGKPL VD TA +R + ARVCVE
Sbjct: 193 KAHLYEKSALLLIAKTIGKPLFVDEATAKGSRPSVARVCVE 233
Score = 26.6 bits (57), Expect(2) = 9e-08
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 4824 VEYSWKPPQCSKCSTFCHNESKCPKKTEHQAKGGS 4720
VE+S P C C HNE+ C + GS
Sbjct: 264 VEFSQMPDYCEHCCHVGHNETTCLVLGNNSKSSGS 298
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 397 bits (1021), Expect = e-107
Identities = 222/644 (34%), Positives = 346/644 (53%), Gaps = 41/644 (6%)
Frame = -1
Query: 3190 EESMRKQQSRVQWLELGDNNTKFFHNSIKERRSRNRILVLYDDEGNRLNSDAEISAEYVA 3011
EES +Q+SR+ W GD NTK+FH R S N I LYD G ++S I +
Sbjct: 348 EESFFRQKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCAS 407
Query: 3010 YYTELFGHANDTLYDENAWDQM*LVNIVTEEEGRKMVDSVTDNEIIHALSTIDSDKAPGP 2831
Y+ L G D E + L + + ++ + ++ +I AL ++ +K+ GP
Sbjct: 408 YFGSLLGDEVDPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGP 467
Query: 2830 DGFSAHFFKSCWRIIGGDFIKAIKSCFSSAKLLGEVNATLISLAPKVTNATTLNDFRPIA 2651
DGF+A FF W I+G + AIK FSS LL + NAT I L PK+ N T +DFRPI+
Sbjct: 468 DGFTAEFFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPIS 527
Query: 2650 CCNVMYKCIAKILTVRLKNVARKLVSPCQSSFISGRSIQDNIMLAHELLRNYHRNNGATI 2471
C N +YK IA++LT RL+ + ++S QS+F+ GRS+ +N++LA +L+ Y+ +N +
Sbjct: 528 CLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPR 587
Query: 2470 CAIKIDLRKAYDCIR*DVILTMLTKFNFPEKFIWWIKMCITTQKFSIMVNGSAYGYIHGR 2291
+K+DL+KA+D +R + ++ L PEKFI WI CI+T F++ +NG G+
Sbjct: 588 GMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKST 647
Query: 2290 RGIRQGCPLSPYLFVLLMEVFNSIMLKQVASRQFSLHPKCKIHVITHLCFADDLLVFMKG 2111
+G+RQG PLSPYLFVL ME F++++ + S HPK I+HL FADD+++F G
Sbjct: 648 KGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDG 707
Query: 2110 DARSANSLATALTSFSNRTGLVVNHRKSNIFLSSVDDITSYSIKYVPGFEVGTLPMRYLG 1931
+ S + + L F++ +GL VN KS+++L+ ++ + S + GF +GTLP+RYLG
Sbjct: 708 GSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLES-NANAAYGFPIGTLPIRYLG 766
Query: 1930 LPLLSTRLSHQDCIPLVDKVKSRIQSWKARDLAYAG-IELI------------------- 1811
LPL++ +L + PL++K+ +R +SW + L++AG I+LI
Sbjct: 767 LPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPK 826
Query: 1810 ---------------------YKQPSVKWTNFFHPMSEGGLGIKCISTTNIAVNLRHIWD 1694
K V W P SEGGLG++ + N +++R IW
Sbjct: 827 GCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWR 886
Query: 1693 IMSSKNTIWVRWVQDNLIKAQDFWYLKAPTDSSWCWRRILDHRPIATKFVLHLIGNGDNT 1514
+ +K+++W W + + FW ++ SW W+R+L RP+A +F++ +GNG
Sbjct: 887 LFVAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKA 946
Query: 1513 KLWKDNWLGHGSLMGMFPPQMQFDSDHHLDARVSSCLVEGTWNL 1382
W DNW G L + L A+V+S E W L
Sbjct: 947 DYWYDNWTSLGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRL 990
Score = 109 bits (273), Expect(2) = 6e-28
Identities = 79/252 (31%), Positives = 127/252 (50%), Gaps = 8/252 (3%)
Frame = -3
Query: 4061 SFVEAF**HSHHELGRIWVIWDGSVVKANYISSSAQHITVSVSIQNGP-WFIATFVYAHN 3885
SFVE + + +LG+IWV+WD S V+ ++ S Q IT V + P W I + VYA N
Sbjct: 58 SFVENY---AFSDLGKIWVMWDPS-VQVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAAN 113
Query: 3884 SETQREDLWSNIKCFSESNTL---PWCLMGDFNPCLYAHEKEGGNPVSTT---SMTALQG 3723
R++LW I S + PW ++GDFN L + +E NPVS +M +
Sbjct: 114 EVASRKELWIEIVNMVVSGIIGDRPWLVLGDFNQVL--NPQEHSNPVSLNVDINMRDFRD 171
Query: 3722 CLQDSQIFDCPYVGCFYTWSNRQDAESRINCKLDRSIINMAWLEVFPDSVTDFCNSGISV 3543
CL +++ D Y G +TW N+ + + K+DR ++N +W +FP S+ F + S
Sbjct: 172 CLLAAELSDLRYKGNTFTWWNKSHT-TPVAKKIDRILVNDSWNALFPSSLGIFGSLDFSD 230
Query: 3542 HSPMIMSVFADRGNGPRAYRFFITCTE*DDFLKVVEEAW-NIPVQGTPMFIFVTRLKNVK 3366
H + + R ++FF + DFL +V + W + V G+ MF +LK +K
Sbjct: 231 HVSCGVVLEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALK 290
Query: 3365 DNLILWKKNNFS 3330
+ + + N+S
Sbjct: 291 KPIKDFSRLNYS 302
Score = 45.4 bits (106), Expect(2) = 6e-28
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1
Query: 4222 MTINMGCWNIGGFNDPMKHVELKNFIYKNNIKICGVVETRVQEQNNDRILASIAPSWKHF 4043
M N+ CWNI GFN+ K ++ N GV+ET V++ + + + ++ P W
Sbjct: 1 MCTNLFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPKDRKFINALLPGWSFV 60
Query: 4042 DN 4037
+N
Sbjct: 61 EN 62
Score = 71.6 bits (174), Expect = 4e-09
Identities = 37/162 (22%), Positives = 68/162 (41%)
Frame = -3
Query: 1271 FFLKDTYNALRHKEVKKKWHKLIWFPHCIPRHCFIVWVSLQRGLKTKFKLLSWGMEVDPV 1092
F T+ A+R K K W IWF +P++ F +WVS L T+ +L SWG
Sbjct: 1033 FSAAKTWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDA 1092
Query: 1091 CILCNIMLEDDYHLFFSCSYPVFXXXXXXXXXXXRDVIAQDWDKQIDWCVDHIKGGNSIG 912
C+LC+ E HL C + R + W + + W +
Sbjct: 1093 CVLCSFASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSELLSWV--RQSSPEAPP 1150
Query: 911 TIKRLMFNAFIYHVWCERNRRTFSQKSMPAGLLFLKMIEDVR 786
+++++ +Y++W +RN + + ++F + ++R
Sbjct: 1151 LLRKIVSQVVVYNLWRQRNNLLHNSLRLAPAVIFKLVDREIR 1192