BLASTX nr result
ID: Papaver27_contig00009669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00009669
(6475 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 2014 0.0
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 2013 0.0
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 2013 0.0
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,... 1996 0.0
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,... 1996 0.0
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1992 0.0
ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [A... 1988 0.0
ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phas... 1987 0.0
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1983 0.0
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 1982 0.0
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1982 0.0
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 1980 0.0
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1980 0.0
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 1979 0.0
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1976 0.0
ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prun... 1974 0.0
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1966 0.0
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei... 1945 0.0
gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helica... 1935 0.0
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g... 1905 0.0
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 2014 bits (5219), Expect = 0.0
Identities = 987/1262 (78%), Positives = 1106/1262 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNWL YTYLYIRMLRNPTLYGL D L+RD TLEERRADL
Sbjct: 566 NAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADL----- 620
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH +AT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 621 -----------IHSSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 669
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 670 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 729
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+ EKALNLCK++ K+MW+V
Sbjct: 730 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKMINKRMWSV 789
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GIP +IL K+EK+++AWE YYDLSSQEI +L PK+G+ LHK+IHQFPKLN
Sbjct: 790 QTPLRQFNGIPNEILMKLEKKDLAWERYYDLSSQEIGELIRFPKMGRTLHKFIHQFPKLN 849
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVEPFWVIVEDNDGE+ILHHEYFMLKKQY
Sbjct: 850 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQY 909
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 910 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 969
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 970 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1029
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + + R VYIAP+EA+AKERY DW ATDLKLLEK Q+
Sbjct: 1030 NHQKGPDSVTRAVYIAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATDLKLLEKSQI 1089
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK+VQQVSLFIID VSRMRY+AS E
Sbjct: 1090 IISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIAS--QIE 1147
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALS+SLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1148 NKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1207
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+NGKPA++FVPTR+ RLTA D +TYS+ADSGE+P F+++S EELEPF
Sbjct: 1208 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDLMTYSSADSGEKPAFMMRSIEELEPF 1267
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ +V++ ML +TLR G+GYLHEGL+S+D E+VS LF+AGWIQVCV SSSMCWG+ L AHL
Sbjct: 1268 VGRVQDEMLRSTLRQGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLAAHL 1327
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1328 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1387
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDN NAEVV GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1388 AFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1447
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT+SDLEASKC+++EE +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1448 LSDHLSELVENTLSDLEASKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1507
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
++KGLLEILASASEYA+LP RPGEEE++RRLINHQR+SFENPR +DPHVKAN LL AHFS
Sbjct: 1508 RMKGLLEILASASEYAQLPIRPGEEEVLRRLINHQRFSFENPRYSDPHVKANVLLQAHFS 1567
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
RH+V GNL DQRE+L+S+SRLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1568 RHSVGGNLALDQREVLLSSSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSML 1627
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAK+CQENPGKSIETVFDL EM+DD+R+ELLQMS+ +LLD+ RFC RFPNI
Sbjct: 1628 LQLPHFTKELAKKCQENPGKSIETVFDLVEMEDDERRELLQMSNSELLDVVRFCNRFPNI 1687
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
DM+YEV++ TLERDL +EVGPVDA RYPK KEEGWWLVVGD+K+N
Sbjct: 1688 DMSYEVMDGEDVRMGDDITLQVTLERDLEGRTEVGPVDAARYPKAKEEGWWLVVGDTKSN 1747
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRKSKVKLEF APSE GRKSYTLYFMCDSYLGCDQEYSF +DVKEAG
Sbjct: 1748 QLLAIKRVSLQRKSKVKLEFAAPSETGRKSYTLYFMCDSYLGCDQEYSFNVDVKEAGGPD 1807
Query: 6140 DD 6145
+D
Sbjct: 1808 ED 1809
Score = 361 bits (927), Expect(2) = e-101
Identities = 191/257 (74%), Positives = 209/257 (81%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGIT KKPLQRFQLMNDICYE
Sbjct: 315 LSATLPNYEDVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYE 374
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRD+ALANDTL RFLKEDS SREILQ+ + V+
Sbjct: 375 KVMAVAGKHQVLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVK 434
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM R DR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 435 SNDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 494
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGH+E MN QLPIE
Sbjct: 495 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIE 554
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 555 SQFVSKLADQLNAEIVL 571
Score = 38.1 bits (87), Expect(2) = e-101
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R ++Y +KV EL GDQSLT ++ + E + + T
Sbjct: 218 NLSNRLQEYGVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 277
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 278 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 310
Score = 253 bits (646), Expect = 8e-64
Identities = 208/778 (26%), Positives = 363/778 (46%), Gaps = 28/778 (3%)
Frame = +2
Query: 3548 LPV-SFRH-------LILPEKYPLPT----ELLDLQPLPVTALRNPEFEALYQEFMHFNP 3691
LPV S+RH + +P P P +L+ + +P A P F+ + Q N
Sbjct: 93 LPVGSYRHTSKGYEEVHVPALKPRPIASDEKLVKISDMPGWA--QPAFKGMQQ----LNR 146
Query: 3692 IQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR------NHQKGL--NGIMRVVYIA 3847
+Q++V+ DNVL+ APTG+GKT A +L+ N + G + ++VY+A
Sbjct: 147 VQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMNKEDGSFNHSDYKIVYVA 206
Query: 3848 PVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WK 4027
P++AL E + T ++ E+ Q++++TPEKWD ++R
Sbjct: 207 PMKALVAEVVGNLSNRLQEYGVKVRELSGDQSLTRQQI-EETQIIVTTPEKWDIITRKSG 265
Query: 4028 VRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAK 4207
R + Q V L IID V+R V ++ IR+V LS +L N +
Sbjct: 266 DRTYTQLVKLLIIDEIHLLHDNRGPVLESIVART--VRQIETTKEHIRLVGLSATLPNYE 323
Query: 4208 DLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNG 4384
D+ ++ GLF+F RPVPL G+ + R Q M Y ++ A
Sbjct: 324 DVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKH 383
Query: 4385 KPALMFVPTRRRSRLTAADF--VTYSNADSGERPLFLLKSEEELEPFISKVKEPMLSATL 4558
+ L+FV +R+ + TA +N G S E L+ VK L L
Sbjct: 384 Q-VLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREILQSHTDMVKSNDLKDLL 442
Query: 4559 RHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRE 4738
+G H G+T D ++V LF G +QV V+++++ WG+ LPAH V++ GTQ Y+ +
Sbjct: 443 PYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEK 502
Query: 4739 NIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLH 4918
T+ D++QM+G A RP D+ G+ +I+ + +YY + + LP+ES L
Sbjct: 503 GAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSKLA 562
Query: 4919 DNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNL-QGVSHRH--LSDHLSELVE 5089
D LNAE+V G + N +EA +++ +T++Y R+ +NP Y L V R L + ++L+
Sbjct: 563 DQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADLIH 622
Query: 5090 NTISDLEASKCLSVEEGID-LSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEIL 5266
++ + L+ + + + +LG + S Y I++ T+ +N L L +
Sbjct: 623 SSATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLF 682
Query: 5267 ASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NL 5443
+ + E+ + R E+ + +L++ + +P K N LL A+ S+ + G +L
Sbjct: 683 SLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSL 741
Query: 5444 VSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTK 5623
SD I SA RLL+A+ +++ GW L + + +M+ + ++ + L Q
Sbjct: 742 TSDMVFITQSAGRLLRALFEIVLKRGWAQLTEKALNLCKMINKRMWSVQTPLRQFNGIPN 801
Query: 5624 ELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
E+ + E + E +DL+ + + +M + +F +FP +++ V
Sbjct: 802 EILMKL-EKKDLAWERYYDLSSQEIGELIRFPKMG----RTLHKFIHQFPKLNLAAHV 854
Score = 85.9 bits (211), Expect(2) = 2e-18
Identities = 59/128 (46%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R G D
Sbjct: 366 QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDSALANDTLGRFLKEDSASREI 425
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H GM R R LVE+L +GHV+VL+ TATLAW
Sbjct: 426 LQSHTDMVKS---NDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWG 482
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 483 VNLPAHTV 490
Score = 37.7 bits (86), Expect(2) = 2e-18
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 487 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 529
Score = 63.5 bits (153), Expect(2) = 1e-14
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGH+EL YYL MN QLP+ SQFV K LA R
Sbjct: 521 GRPQYDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 579
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL++ M RNPT +GL
Sbjct: 580 ACNWLGYT-YLYIRMLRNPTLYGL 602
Score = 47.0 bits (110), Expect(2) = 1e-14
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GM R D LV +L +GH+QVLV TATL +
Sbjct: 439 KDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAW 481
Score = 84.7 bits (208), Expect = 5e-13
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y +V A+ GK ++FV +RK TA + + A+ S+
Sbjct: 1203 RMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDLMTYSSADSGEKPAFMMRSI 1261
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
E L+ G V+ L+ L G + G++ D+E+V LF G +QV V ++++ W
Sbjct: 1262 --EELEPFVGRVQDEMLRSTLRQGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCW 1319
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1320 GVPLAAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1379
Query: 2289 XXXXXMNNQLPIESQFVSKLAD 2354
+ P+ES L D
Sbjct: 1380 YYKKFLYEAFPVESHLHHFLHD 1401
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 2013 bits (5216), Expect = 0.0
Identities = 989/1263 (78%), Positives = 1102/1263 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC+W+ YTYLY+RMLRNPTLYGL DAL+RD TLEERRADL
Sbjct: 933 NAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSHDALTRDITLEERRADL----- 987
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AA +L++NNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 988 -----------IHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1036
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1037 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1096
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+ EKALNLCK+V K+MW+V
Sbjct: 1097 YISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSV 1156
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+ IP +IL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKL+
Sbjct: 1157 QTPLRQFNAIPNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGRTLHKFIHQFPKLD 1216
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHG+VEPFWVIVEDNDGE+ILHHEYFM+KKQY
Sbjct: 1217 LAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHEYFMMKKQY 1276
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDE HTLNFTVPIYEPLPPQYF+RVVSD+WL SQSVLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1277 IDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPPPTELLDLQ 1336
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQEF HFNPIQTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1337 PLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1396
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG I+R VYIAP+EALAKERY DW ATDLKLLE+GQV
Sbjct: 1397 NHQKGSESIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQV 1456
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1457 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QGE 1514
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1515 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1574
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+N KPA++FVPTR+ RLTA D TYS+AD GE P FLL+S EELEPF
Sbjct: 1575 TKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSPEELEPF 1634
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K++E ML ATLRHG+GYLHEGLT +D E+VS LF+AGWIQVCV SSS+CWG+ L AHL
Sbjct: 1635 VGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHL 1694
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1695 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1754
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHLQHYLHDNLNAE+V GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1755 AFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1814
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE VENT+SDLEASKC+++E+ +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1815 LSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1874
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA++P RPGEE+LIRRLINHQR+SFENP+CTDPH+KANALL AHFS
Sbjct: 1875 KMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFS 1934
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQRE+L+SA RLLQAMVDVISSNGWL+LALL MEVSQMVTQG++ERDSML
Sbjct: 1935 RQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSML 1994
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAKRCQENPGKSIETVFDL EM+DD+R+ELLQMSD QLLDIARFC RFPNI
Sbjct: 1995 LQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNI 2054
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D+TYEVL+ LERDL +EVG VDAPRYPK KEEGWWLVVGD+K+N
Sbjct: 2055 DITYEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSN 2114
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRV+LQRKSKVKLEF P+EAGRKSYTLYFMCDSYLGCDQEYSF++DV +A
Sbjct: 2115 QLLAIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPE 2174
Query: 6140 DDS 6148
+DS
Sbjct: 2175 EDS 2177
Score = 358 bits (920), Expect(2) = e-100
Identities = 190/257 (73%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 682 LSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYE 741
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRD ALANDTL RFLKEDS SREIL + + V+
Sbjct: 742 KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVK 801
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
+NDLKDLLPYGFAIH+AGMAR DR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 802 NNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKG 861
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 862 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 921
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 922 SQFVSKLADQLNAEIVL 938
Score = 37.4 bits (85), Expect(2) = e-100
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQSLT ++ + E + + T
Sbjct: 585 NLSNRLQHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 644
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 645 VDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 677
Score = 252 bits (644), Expect = 1e-63
Identities = 201/750 (26%), Positives = 349/750 (46%), Gaps = 18/750 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKT--- 3772
EL+ + +P A P F+ + Q N +Q++V+ T +NVL+ APTG+GKT
Sbjct: 491 ELVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFTAENVLLCAPTGAGKTNVA 544
Query: 3773 ---ICAEFAVLRNHQKGLN-GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXX 3940
I + A+ RN N ++VY+AP++AL E +
Sbjct: 545 MLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSGDQ 604
Query: 3941 XATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXV 4120
T ++ E+ Q++++TPEKWD ++R R + Q V L I+D V
Sbjct: 605 SLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIV 663
Query: 4121 SRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQ 4297
+R V ++ IR+V LS +L N +D+ ++ GLF+F RP PL
Sbjct: 664 ART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYI 721
Query: 4298 GVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADSG 4471
G+ + R Q M Y ++ A + L+FV +R+ + TA +N G
Sbjct: 722 GITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTALANDTLG 780
Query: 4472 ERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVC 4651
S E L VK L L +G H G+ D ++V LF G +QV
Sbjct: 781 RFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVL 840
Query: 4652 VASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMI 4831
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+ +I
Sbjct: 841 VSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGII 900
Query: 4832 LCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRL 5011
+ + +YY + + LP+ES L D LNAE+V G + N +EA +I +T++Y R+
Sbjct: 901 ITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRM 960
Query: 5012 SQNPNYYNLQGVSHRHLS------DHLSELVENTISDLEASKCLSVEEGID-LSPLNLGM 5170
+NP Y G+SH L+ + ++L+ + L+ + + + +LG
Sbjct: 961 LRNPTLY---GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGR 1017
Query: 5171 VGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRY 5350
+ S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1018 IASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPI 1077
Query: 5351 SFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWL 5527
+ +P K N LL A+ S+ + G +L SD I SA RL++A+ +++ GW
Sbjct: 1078 PIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWA 1136
Query: 5528 DLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKR 5707
L + + +MV + ++ + L Q E+ + E + E +DL+ +
Sbjct: 1137 QLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQE---L 1192
Query: 5708 QELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
EL++ + + +F +FP +D+ V
Sbjct: 1193 GELIRYPKMG-RTLHKFIHQFPKLDLAAHV 1221
Score = 86.7 bits (213), Expect(2) = 9e-19
Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-------------- 570
Q+ ND+CYEKVMA AG+ QV IFVHSRKE KT R D
Sbjct: 733 QLMNDVCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREI 792
Query: 571 ----NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
E + + L+ A+H GMAR R LVEEL +GHV+VL+ TATLAW +NL
Sbjct: 793 LHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNL 852
Query: 739 PAHTL 753
PAHT+
Sbjct: 853 PAHTV 857
Score = 37.7 bits (86), Expect(2) = 9e-19
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 854 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 896
Score = 66.2 bits (160), Expect(2) = 3e-16
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 888 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 946
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+ +T YL+V M RNPT +GL
Sbjct: 947 ACSWIGYT-YLYVRMLRNPTLYGL 969
Score = 49.7 bits (117), Expect(2) = 3e-16
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GMAR D LV EL +GH+QVLV TATL +
Sbjct: 806 KDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAW 848
Score = 86.3 bits (212), Expect = 2e-13
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIRDAALANDTLS-RFLKEDSV 1928
R Q M Y +V A + ++FV +RK TA + + A+ + FL
Sbjct: 1570 RMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLR--- 1626
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ G ++ L+ L +G + G+ D+E+V LF G +QV V +++L W
Sbjct: 1627 SPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCW 1686
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1687 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1746
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1747 YYKKFLYEAFPVESHLQHYLHDNL 1770
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 2013 bits (5214), Expect = 0.0
Identities = 989/1263 (78%), Positives = 1101/1263 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC+W+ YTYLY+RMLRNPTLYGL DAL+RD TLEERRADL
Sbjct: 900 NAEIVLGTVQNAREACSWIGYTYLYVRMLRNPTLYGLSHDALTRDITLEERRADL----- 954
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AA +L++NNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 955 -----------IHSAAIILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1003
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1004 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1063
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+ EKALNLCK+V K+MW+V
Sbjct: 1064 YISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWAQLTEKALNLCKMVNKRMWSV 1123
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+ IP +IL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKL+
Sbjct: 1124 QTPLRQFNAIPNEILMKLEKKDLAWERYYDLSSQELGELIRYPKMGRTLHKFIHQFPKLD 1183
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHG+VEPFWVIVEDNDGE+ILHHEYFM+KKQY
Sbjct: 1184 LAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHEYFMMKKQY 1243
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDE HTLNFTVPIYEPLPPQYF+RVVSD+WL SQSVLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1244 IDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPPPTELLDLQ 1303
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQEF HFNPIQTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1304 PLPVTALRNPSYEALYQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1363
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG I+R VYIAP+EALAKERY DW ATDLKLLE+GQV
Sbjct: 1364 NHQKGSESIVRAVYIAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQV 1423
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1424 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QGE 1481
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1482 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1541
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+N KPA++FVPTR+ RLTA D TYS+AD GE P FLL+S EELEPF
Sbjct: 1542 TKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSPEELEPF 1601
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K++E ML ATLRHG+GYLHEGLT +D E+VS LF+AGWIQVCV SSS+CWG+ L AHL
Sbjct: 1602 VGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHL 1661
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1662 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1721
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHLQHYLHDNLNAE+V GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1722 AFPVESHLQHYLHDNLNAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1781
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE VENT+SDLEASKC+++E+ +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1782 LSDHLSESVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1841
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA++P RPGEE+LIRRLINHQR+SFENP+CTDPH+KANALL AHFS
Sbjct: 1842 KMKGLLEILASASEYAQIPIRPGEEDLIRRLINHQRFSFENPKCTDPHIKANALLQAHFS 1901
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQRE+L+SA RLLQAMVDVISSNGWL+LALL MEVSQMVTQG++ERDSML
Sbjct: 1902 RQIVGGNLALDQREVLLSAGRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSML 1961
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAKRCQENPGKSIETVFDL EM+DD+R+ELLQMSD QLLDIARFC RFPNI
Sbjct: 1962 LQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIARFCNRFPNI 2021
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D TYEVL+ LERDL +EVG VDAPRYPK KEEGWWLVVGD+K+N
Sbjct: 2022 DXTYEVLDSENLRAGDDITLQVMLERDLEGRTEVGSVDAPRYPKAKEEGWWLVVGDTKSN 2081
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRV+LQRKSKVKLEF P+EAGRKSYTLYFMCDSYLGCDQEYSF++DV +A
Sbjct: 2082 QLLAIKRVALQRKSKVKLEFAVPAEAGRKSYTLYFMCDSYLGCDQEYSFSVDVMDASGPE 2141
Query: 6140 DDS 6148
+DS
Sbjct: 2142 EDS 2144
Score = 358 bits (920), Expect(2) = e-100
Identities = 190/257 (73%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 649 LSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDVCYE 708
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRD ALANDTL RFLKEDS SREIL + + V+
Sbjct: 709 KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHSHTELVK 768
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
+NDLKDLLPYGFAIH+AGMAR DR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 769 NNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKG 828
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 829 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 888
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 889 SQFVSKLADQLNAEIVL 905
Score = 37.4 bits (85), Expect(2) = e-100
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQSLT ++ + E + + T
Sbjct: 552 NLSNRLQHYDVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 611
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 612 VDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 644
Score = 252 bits (644), Expect = 1e-63
Identities = 201/750 (26%), Positives = 349/750 (46%), Gaps = 18/750 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKT--- 3772
EL+ + +P A P F+ + Q N +Q++V+ T +NVL+ APTG+GKT
Sbjct: 458 ELVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFTAENVLLCAPTGAGKTNVA 511
Query: 3773 ---ICAEFAVLRNHQKGLN-GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXX 3940
I + A+ RN N ++VY+AP++AL E +
Sbjct: 512 MLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQHYDVKVKELSGDQ 571
Query: 3941 XATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXV 4120
T ++ E+ Q++++TPEKWD ++R R + Q V L I+D V
Sbjct: 572 SLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESIV 630
Query: 4121 SRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQ 4297
+R V ++ IR+V LS +L N +D+ ++ GLF+F RP PL
Sbjct: 631 ART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQYI 688
Query: 4298 GVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADSG 4471
G+ + R Q M Y ++ A + L+FV +R+ + TA +N G
Sbjct: 689 GITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTALANDTLG 747
Query: 4472 ERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVC 4651
S E L VK L L +G H G+ D ++V LF G +QV
Sbjct: 748 RFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVL 807
Query: 4652 VASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMI 4831
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+ +I
Sbjct: 808 VSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGII 867
Query: 4832 LCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRL 5011
+ + +YY + + LP+ES L D LNAE+V G + N +EA +I +T++Y R+
Sbjct: 868 ITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLYVRM 927
Query: 5012 SQNPNYYNLQGVSHRHLS------DHLSELVENTISDLEASKCLSVEEGID-LSPLNLGM 5170
+NP Y G+SH L+ + ++L+ + L+ + + + +LG
Sbjct: 928 LRNPTLY---GLSHDALTRDITLEERRADLIHSAAIILDRNNLVKYDRKSGYFQVTDLGR 984
Query: 5171 VGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRY 5350
+ S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 985 IASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPI 1044
Query: 5351 SFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWL 5527
+ +P K N LL A+ S+ + G +L SD I SA RL++A+ +++ GW
Sbjct: 1045 PIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLVRALFEIVLKRGWA 1103
Query: 5528 DLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKR 5707
L + + +MV + ++ + L Q E+ + E + E +DL+ +
Sbjct: 1104 QLTEKALNLCKMVNKRMWSVQTPLRQFNAIPNEILMKL-EKKDLAWERYYDLSSQE---L 1159
Query: 5708 QELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
EL++ + + +F +FP +D+ V
Sbjct: 1160 GELIRYPKMG-RTLHKFIHQFPKLDLAAHV 1188
Score = 86.7 bits (213), Expect(2) = 9e-19
Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-------------- 570
Q+ ND+CYEKVMA AG+ QV IFVHSRKE KT R D
Sbjct: 700 QLMNDVCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREI 759
Query: 571 ----NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
E + + L+ A+H GMAR R LVEEL +GHV+VL+ TATLAW +NL
Sbjct: 760 LHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAWGVNL 819
Query: 739 PAHTL 753
PAHT+
Sbjct: 820 PAHTV 824
Score = 37.7 bits (86), Expect(2) = 9e-19
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 821 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 863
Score = 66.2 bits (160), Expect(2) = 3e-16
Identities = 42/84 (50%), Positives = 49/84 (58%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 855 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 913
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+ +T YL+V M RNPT +GL
Sbjct: 914 ACSWIGYT-YLYVRMLRNPTLYGL 936
Score = 49.7 bits (117), Expect(2) = 3e-16
Identities = 27/43 (62%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GMAR D LV EL +GH+QVLV TATL +
Sbjct: 773 KDLLPYGFAIHHAGMARADRQLVEELFADGHVQVLVSTATLAW 815
Score = 86.3 bits (212), Expect = 2e-13
Identities = 62/204 (30%), Positives = 96/204 (47%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIRDAALANDTLS-RFLKEDSV 1928
R Q M Y +V A + ++FV +RK TA + + A+ + FL
Sbjct: 1537 RMQAMTKPTYTAIVQHAKNRKPAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLR--- 1593
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ G ++ L+ L +G + G+ D+E+V LF G +QV V +++L W
Sbjct: 1594 SPEELEPFVGKIQEEMLRATLRHGVGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCW 1653
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1654 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1713
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1714 YYKKFLYEAFPVESHLQHYLHDNL 1737
>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 1996 bits (5171), Expect = 0.0
Identities = 973/1266 (76%), Positives = 1105/1266 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNW++YTYLY+RMLRNPTLYGLPAD LSRD TL+ERRADL
Sbjct: 816 NAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADL----- 870
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 871 -----------IHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 919
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIEL R+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 920 KPTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 979
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMV+ITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+V K+MWNV
Sbjct: 980 YISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNV 1039
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP +IL K+EK+++AW+ YYDLSSQEI +L K+G+ LH++IHQFPKLN
Sbjct: 1040 QTPLRQFHGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRFQKMGRTLHRFIHQFPKLN 1099
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVEPFWVIVEDNDGE++LHHEYF+LKKQY
Sbjct: 1100 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHEYFLLKKQY 1159
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ++LPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1160 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQ 1219
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1220 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1279
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + IMRVVYIAP+EA+AKERY DW + DLKLLEKGQ+
Sbjct: 1280 NHQKGPDSIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQI 1339
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
VISTPEKWD+LSR WK RK+VQQVS+FI+D VSRMRY+AS E
Sbjct: 1340 VISTPEKWDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIAS--QVE 1397
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1398 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1457
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTA+VQHA+NGKPA++FVPTR+ RLTA D ++YS D+ E P F L+S EEL+PF
Sbjct: 1458 TKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTAVDLMSYSKVDN-EEPAFRLRSAEELKPF 1516
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ E L TL HG+GYLHEGL S+D E+VS LF+AGWIQVCV SSS+CWG+ L AHL
Sbjct: 1517 VDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHL 1576
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1577 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1636
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDN NAE+V VI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1637 AFPVESHLHHFLHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1696
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT++DLEASKC+++E+ +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1697 LSDHLSELVENTLTDLEASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1756
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA+LP RPGEE+++RRLINHQR+SFENPRCTDPHVKANALL AHF+
Sbjct: 1757 KMKGLLEILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFT 1816
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQRE+L+ A+RLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1817 RQHVGGNLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSML 1876
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAKRCQENPGK+IET+FDL EM+DD+R+ELLQMSDLQLLDIA+FC RFPNI
Sbjct: 1877 LQLPHFTKDLAKRCQENPGKNIETIFDLVEMEDDERRELLQMSDLQLLDIAKFCNRFPNI 1936
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++Y+VLE TLERDL +EVGPVDAPRYPK KEEGWWLVVG++++N
Sbjct: 1937 DLSYDVLEGENVRAGENVTLQVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLVVGETRSN 1996
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRK+KVKLEF AP+EA +K+YTLYFMCDSYLGCDQEY+FT+D KEA
Sbjct: 1997 QLLAIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2056
Query: 6140 DDSGRQ 6157
+DSG++
Sbjct: 2057 EDSGKE 2062
Score = 361 bits (927), Expect(2) = e-100
Identities = 190/257 (73%), Positives = 211/257 (82%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGIT KKPLQRFQLMNDICYE
Sbjct: 565 LSATLPNYEDVALFLRVDLKEGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYE 624
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARA+RD ALANDTLSRFLKED+ SREILQ+ + V+
Sbjct: 625 KVMAVAGKHQVLIFVHSRKETTKTARAVRDTALANDTLSRFLKEDAASREILQSHTDMVK 684
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AG+ARTDR++VE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 685 SNDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKG 744
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIY+PEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 745 TQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 804
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 805 SQFVSKLADQLNAEIVL 821
Score = 35.8 bits (81), Expect(2) = e-100
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ HR + Y + V EL GDQ+LT ++ + E + + T
Sbjct: 468 NLSHRLEAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 527
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 528 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 560
Score = 265 bits (677), Expect = 2e-67
Identities = 211/767 (27%), Positives = 363/767 (47%), Gaps = 23/767 (2%)
Frame = +2
Query: 3566 HLILPEKYPLPTE--LLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNV 3739
H+ P+ PL ++ L+ + +P A P F+ + Q N +Q++V+ DN+
Sbjct: 360 HVPAPKSKPLESDERLVKISEMPEWA--QPAFKGMQQ----LNRVQSKVYETALFAADNI 413
Query: 3740 LVAAPTGSGKTICAEFAVLRNHQKGLN---------GIMRVVYIAPVEALAKERYHDWXX 3892
L+ APTG+GKT A +L+ Q LN ++VY+AP++AL E +
Sbjct: 414 LLCAPTGAGKTNVAVLTILQ--QLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSH 471
Query: 3893 XXXXXXXXXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDX 4072
T ++ ++ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 472 RLEAYGVTVRELSGDQTLTRQQI-DETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDE 530
Query: 4073 XXXXXXXXXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLF 4249
V+R V ++ IR+V LS +L N +D+ ++ GLF
Sbjct: 531 IHLLHDNRGPVLESIVART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKEGLF 588
Query: 4250 NFPPGVRPVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRL 4429
+F RPVPL G+ + R Q M Y ++ A + L+FV +R+ +
Sbjct: 589 HFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTK 647
Query: 4430 TAADFVTYSNADSGERPLFLLK----SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTS 4597
TA A + + LK S E L+ VK L L +G H GL
Sbjct: 648 TAR--AVRDTALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLAR 705
Query: 4598 VDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQ 4777
D +IV LF G +QV V+++++ WG+ LPAH V++ GTQ Y + T+ D++Q
Sbjct: 706 TDRQIVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQ 765
Query: 4778 MMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVIN 4957
M+G A RP D+ G+ +I+ + +YY + + LP+ES L D LNAE+V G +
Sbjct: 766 MLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQ 825
Query: 4958 NKQEAVDYITWTFMYRRLSQNPNYYNLQG-VSHRHLS--DHLSELVENTISDLEASKCLS 5128
N +EA ++IT+T++Y R+ +NP Y L V R L+ + ++L+ + + L+ + +
Sbjct: 826 NAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVK 885
Query: 5129 VEEGID-LSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRP 5305
+ +LG + S Y I++ T+ +N L L + + + E+ + R
Sbjct: 886 YDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQ 945
Query: 5306 GEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASR 5482
E+ + +L++ + +P K N LL A+ S+ + G +L SD I SA R
Sbjct: 946 DEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGR 1004
Query: 5483 LLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKS 5662
LL+A+ +++ GW LA + + +MVT+ ++ + L Q E+ + E +
Sbjct: 1005 LLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKL-EKKDLA 1063
Query: 5663 IETVFDLAEMDDDKRQELLQMSDLQLL--DIARFCERFPNIDMTYEV 5797
+ +DL+ QE+ ++ Q + + RF +FP +++ V
Sbjct: 1064 WDRYYDLSS------QEIGELIRFQKMGRTLHRFIHQFPKLNLAAHV 1104
Score = 88.2 bits (217), Expect(2) = 3e-19
Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*------------------- 555
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R
Sbjct: 616 QLMNDICYEKVMAVAGKHQVLIFVHSRKETTKTARAVRDTALANDTLSRFLKEDAASREI 675
Query: 556 --DFTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H G+ART R +VEEL +GHV+VL+ TATLAW
Sbjct: 676 LQSHTDMVKS---NDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAWG 732
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 733 VNLPAHTV 740
Score = 38.1 bits (87), Expect(2) = 3e-19
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY+ QMLGR GRPQ+D+ G
Sbjct: 737 AHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 779
Score = 82.8 bits (203), Expect = 2e-12
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y VV A+ GK ++FV +RK TA + + ++ F
Sbjct: 1453 RMQAMTKPTYTAVVQHAKNGK-PAIVFVPTRKHVRLTAVDLMSYSKVDNEEPAFRLR--- 1508
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + L+ L +G + G+ D+E+V LF G +QV V +++L W
Sbjct: 1509 SAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCW 1568
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1569 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1628
Query: 2289 XXXXXMNNQLPIESQFVSKLAD 2354
+ P+ES L D
Sbjct: 1629 YYKKFLYEAFPVESHLHHFLHD 1650
Score = 66.2 bits (160), Expect = 2e-07
Identities = 42/84 (50%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 771 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 829
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNPT +GL
Sbjct: 830 ACNWITYT-YLYVRMLRNPTLYGL 852
>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 1996 bits (5171), Expect = 0.0
Identities = 973/1266 (76%), Positives = 1105/1266 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNW++YTYLY+RMLRNPTLYGLPAD LSRD TL+ERRADL
Sbjct: 930 NAEIVLGTVQNAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADL----- 984
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 985 -----------IHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1033
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIEL R+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1034 KPTMGDIELYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1093
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMV+ITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+V K+MWNV
Sbjct: 1094 YISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNV 1153
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP +IL K+EK+++AW+ YYDLSSQEI +L K+G+ LH++IHQFPKLN
Sbjct: 1154 QTPLRQFHGIPNEILMKLEKKDLAWDRYYDLSSQEIGELIRFQKMGRTLHRFIHQFPKLN 1213
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVEPFWVIVEDNDGE++LHHEYF+LKKQY
Sbjct: 1214 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHEYFLLKKQY 1273
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ++LPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1274 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQ 1333
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1334 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1393
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + IMRVVYIAP+EA+AKERY DW + DLKLLEKGQ+
Sbjct: 1394 NHQKGPDSIMRVVYIAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQI 1453
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
VISTPEKWD+LSR WK RK+VQQVS+FI+D VSRMRY+AS E
Sbjct: 1454 VISTPEKWDALSRRWKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIAS--QVE 1511
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1512 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1571
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTA+VQHA+NGKPA++FVPTR+ RLTA D ++YS D+ E P F L+S EEL+PF
Sbjct: 1572 TKPTYTAVVQHAKNGKPAIVFVPTRKHVRLTAVDLMSYSKVDN-EEPAFRLRSAEELKPF 1630
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ E L TL HG+GYLHEGL S+D E+VS LF+AGWIQVCV SSS+CWG+ L AHL
Sbjct: 1631 VDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHL 1690
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1691 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1750
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDN NAE+V VI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1751 AFPVESHLHHFLHDNFNAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1810
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT++DLEASKC+++E+ +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1811 LSDHLSELVENTLTDLEASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1870
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA+LP RPGEE+++RRLINHQR+SFENPRCTDPHVKANALL AHF+
Sbjct: 1871 KMKGLLEILASASEYAQLPIRPGEEDVLRRLINHQRFSFENPRCTDPHVKANALLQAHFT 1930
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQRE+L+ A+RLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1931 RQHVGGNLALDQREVLLYATRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSML 1990
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAKRCQENPGK+IET+FDL EM+DD+R+ELLQMSDLQLLDIA+FC RFPNI
Sbjct: 1991 LQLPHFTKDLAKRCQENPGKNIETIFDLVEMEDDERRELLQMSDLQLLDIAKFCNRFPNI 2050
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++Y+VLE TLERDL +EVGPVDAPRYPK KEEGWWLVVG++++N
Sbjct: 2051 DLSYDVLEGENVRAGENVTLQVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLVVGETRSN 2110
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRK+KVKLEF AP+EA +K+YTLYFMCDSYLGCDQEY+FT+D KEA
Sbjct: 2111 QLLAIKRVSLQRKAKVKLEFAAPTEAAKKAYTLYFMCDSYLGCDQEYNFTVDAKEAAGPD 2170
Query: 6140 DDSGRQ 6157
+DSG++
Sbjct: 2171 EDSGKE 2176
Score = 361 bits (927), Expect(2) = e-100
Identities = 190/257 (73%), Positives = 211/257 (82%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGIT KKPLQRFQLMNDICYE
Sbjct: 679 LSATLPNYEDVALFLRVDLKEGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYE 738
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARA+RD ALANDTLSRFLKED+ SREILQ+ + V+
Sbjct: 739 KVMAVAGKHQVLIFVHSRKETTKTARAVRDTALANDTLSRFLKEDAASREILQSHTDMVK 798
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AG+ARTDR++VE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 799 SNDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKG 858
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIY+PEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 859 TQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 918
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 919 SQFVSKLADQLNAEIVL 935
Score = 35.8 bits (81), Expect(2) = e-100
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ HR + Y + V EL GDQ+LT ++ + E + + T
Sbjct: 582 NLSHRLEAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 641
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 642 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 674
Score = 265 bits (677), Expect = 2e-67
Identities = 211/767 (27%), Positives = 363/767 (47%), Gaps = 23/767 (2%)
Frame = +2
Query: 3566 HLILPEKYPLPTE--LLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNV 3739
H+ P+ PL ++ L+ + +P A P F+ + Q N +Q++V+ DN+
Sbjct: 474 HVPAPKSKPLESDERLVKISEMPEWA--QPAFKGMQQ----LNRVQSKVYETALFAADNI 527
Query: 3740 LVAAPTGSGKTICAEFAVLRNHQKGLN---------GIMRVVYIAPVEALAKERYHDWXX 3892
L+ APTG+GKT A +L+ Q LN ++VY+AP++AL E +
Sbjct: 528 LLCAPTGAGKTNVAVLTILQ--QLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSH 585
Query: 3893 XXXXXXXXXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDX 4072
T ++ ++ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 586 RLEAYGVTVRELSGDQTLTRQQI-DETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDE 644
Query: 4073 XXXXXXXXXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLF 4249
V+R V ++ IR+V LS +L N +D+ ++ GLF
Sbjct: 645 IHLLHDNRGPVLESIVART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVDLKEGLF 702
Query: 4250 NFPPGVRPVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRL 4429
+F RPVPL G+ + R Q M Y ++ A + L+FV +R+ +
Sbjct: 703 HFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTK 761
Query: 4430 TAADFVTYSNADSGERPLFLLK----SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTS 4597
TA A + + LK S E L+ VK L L +G H GL
Sbjct: 762 TAR--AVRDTALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLAR 819
Query: 4598 VDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQ 4777
D +IV LF G +QV V+++++ WG+ LPAH V++ GTQ Y + T+ D++Q
Sbjct: 820 TDRQIVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQ 879
Query: 4778 MMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVIN 4957
M+G A RP D+ G+ +I+ + +YY + + LP+ES L D LNAE+V G +
Sbjct: 880 MLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQ 939
Query: 4958 NKQEAVDYITWTFMYRRLSQNPNYYNLQG-VSHRHLS--DHLSELVENTISDLEASKCLS 5128
N +EA ++IT+T++Y R+ +NP Y L V R L+ + ++L+ + + L+ + +
Sbjct: 940 NAREACNWITYTYLYVRMLRNPTLYGLPADVLSRDLTLDERRADLIHSAATILDKNNLVK 999
Query: 5129 VEEGID-LSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRP 5305
+ +LG + S Y I++ T+ +N L L + + + E+ + R
Sbjct: 1000 YDRKSGYFQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELYRLFSLSEEFKYVTVRQ 1059
Query: 5306 GEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASR 5482
E+ + +L++ + +P K N LL A+ S+ + G +L SD I SA R
Sbjct: 1060 DEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGR 1118
Query: 5483 LLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKS 5662
LL+A+ +++ GW LA + + +MVT+ ++ + L Q E+ + E +
Sbjct: 1119 LLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWNVQTPLRQFHGIPNEILMKL-EKKDLA 1177
Query: 5663 IETVFDLAEMDDDKRQELLQMSDLQLL--DIARFCERFPNIDMTYEV 5797
+ +DL+ QE+ ++ Q + + RF +FP +++ V
Sbjct: 1178 WDRYYDLSS------QEIGELIRFQKMGRTLHRFIHQFPKLNLAAHV 1218
Score = 88.2 bits (217), Expect(2) = 3e-19
Identities = 58/128 (45%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*------------------- 555
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R
Sbjct: 730 QLMNDICYEKVMAVAGKHQVLIFVHSRKETTKTARAVRDTALANDTLSRFLKEDAASREI 789
Query: 556 --DFTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H G+ART R +VEEL +GHV+VL+ TATLAW
Sbjct: 790 LQSHTDMVKS---NDLKDLLPYGFAIHHAGLARTDRQIVEELFADGHVQVLVSTATLAWG 846
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 847 VNLPAHTV 854
Score = 38.1 bits (87), Expect(2) = 3e-19
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY+ QMLGR GRPQ+D+ G
Sbjct: 851 AHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 893
Score = 82.8 bits (203), Expect = 2e-12
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 2/202 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y VV A+ GK ++FV +RK TA + + ++ F
Sbjct: 1567 RMQAMTKPTYTAVVQHAKNGK-PAIVFVPTRKHVRLTAVDLMSYSKVDNEEPAFRLR--- 1622
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + L+ L +G + G+ D+E+V LF G +QV V +++L W
Sbjct: 1623 SAEELKPFVDKISEETLRTTLEHGVGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCW 1682
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1683 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1742
Query: 2289 XXXXXMNNQLPIESQFVSKLAD 2354
+ P+ES L D
Sbjct: 1743 YYKKFLYEAFPVESHLHHFLHD 1764
Score = 66.2 bits (160), Expect = 2e-07
Identities = 42/84 (50%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 885 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 943
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNPT +GL
Sbjct: 944 ACNWITYT-YLYVRMLRNPTLYGL 966
>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Cicer arietinum]
gi|502089221|ref|XP_004488846.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Cicer arietinum]
Length = 2187
Score = 1992 bits (5160), Expect = 0.0
Identities = 973/1266 (76%), Positives = 1104/1266 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+AKEAC+W+ YTYLY+RMLRNP+LYG+ D L++D TLEERRADL
Sbjct: 942 NAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGIAPDVLTKDITLEERRADL----- 996
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L++NNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 997 -----------IHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1045
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1046 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1105
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLS+TSDMVFITQSAGRL++A+FEI + RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1106 YISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVVKRGWAQLAEKALNLCKMVTKRMWSV 1165
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GIP DIL+K+EK+++AWE YYDLSSQEI +L PK+G+ LHK+IHQFPKLN
Sbjct: 1166 QTPLRQFNGIPNDILTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKFIHQFPKLN 1225
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVL VELT+TPDF W+DR+HGYVEPFWVIVEDNDGE+ILHHEYF+LKKQY
Sbjct: 1226 LAAHVQPITRTVLGVELTVTPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFLLKKQY 1285
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
I+EDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1286 IEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1345
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQEF HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1346 PLPVTALRNPSYEALYQEFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1405
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + +MRVVYIAP+EALAKERY DW ATD+KLLEKGQ+
Sbjct: 1406 NHQKGPDSVMRVVYIAPIEALAKERYRDWKKKFGGGLELRVVELTGETATDVKLLEKGQI 1465
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1466 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QVE 1523
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1524 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1583
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAI QHA+N KPAL+FVPTR+ RLTA D +TYS ADS E+P FLL+ EELEPF
Sbjct: 1584 TKPTYTAIAQHAKNRKPALVFVPTRKHVRLTAVDMITYSGADSSEKP-FLLRPIEELEPF 1642
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
I+KV + ML TLR G+GYLHEGL ++D +IV+ LF+AGWIQVCV SSSMCWG+ L AHL
Sbjct: 1643 INKVSDEMLKVTLREGVGYLHEGLDNLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHL 1702
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN TDYPV DLLQMMGHA+RPL+DNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1703 VVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYE 1762
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDNLNAE+V G+I NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1763 AFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1822
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE+VENT+SDLEASKC+++E+ +DLSPLNLGM+ S Y ISYTT+ERF+SSLTSKT
Sbjct: 1823 LSDHLSEMVENTLSDLEASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKT 1882
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLE+L+SASEYA LP RPGE+EL+RRLINHQR+SFENP+ TDPHVKANALL AHFS
Sbjct: 1883 KMKGLLEVLSSASEYAHLPIRPGEDELVRRLINHQRFSFENPKVTDPHVKANALLQAHFS 1942
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQRE+L+SA+RLLQAMVDVISSNGWL +ALL MEVSQMVTQG++ERDSML
Sbjct: 1943 RQFVGGNLALDQREVLLSANRLLQAMVDVISSNGWLTMALLAMEVSQMVTQGMWERDSML 2002
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAK+CQENPG+SIETVFDL EM+DD+R+ELL M+D QLLDIARFC RFPNI
Sbjct: 2003 LQLPHFTKDLAKKCQENPGRSIETVFDLLEMEDDERRELLNMTDSQLLDIARFCNRFPNI 2062
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++YE+L+ TLERDL +EVGPVDAPRYPK KEEGWWLVVGD+KTN
Sbjct: 2063 DLSYEILDNDNVRAGEDITLQVTLERDLEGKTEVGPVDAPRYPKTKEEGWWLVVGDTKTN 2122
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
LLAIKRVSLQRK K KLEF AP++AG+KSY LYFMCDSY+GCDQEY FT+DVKEA + G
Sbjct: 2123 MLLAIKRVSLQRKLKAKLEFAAPADAGKKSYVLYFMCDSYMGCDQEYGFTLDVKEA-DGG 2181
Query: 6140 DDSGRQ 6157
DDSGR+
Sbjct: 2182 DDSGRE 2187
Score = 362 bits (930), Expect(2) = e-100
Identities = 190/257 (73%), Positives = 210/257 (81%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + + +Y+GIT KKPLQRFQLMNDICYE
Sbjct: 691 LSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYE 750
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRDAALANDTLSRFLKEDS SREIL T + V+
Sbjct: 751 KVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLSRFLKEDSASREILHTHTDLVK 810
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
S+DLKDLLPYGFAIH+AGM RTDR+LVE LF G QVLV TATLAWGVNL AHTVIIKG
Sbjct: 811 SSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKG 870
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGII+TGHSE MN QLPIE
Sbjct: 871 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIE 930
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 931 SQFISKLADQLNAEIVL 947
Score = 34.3 bits (77), Expect(2) = e-100
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R ++Y +KV EL GDQSLT ++ + E + + T
Sbjct: 594 NLSNRLEKYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 653
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K++I
Sbjct: 654 IDEIHLLHDNR--GPVLESIVARTVRQIETTKDYI 686
Score = 249 bits (636), Expect = 1e-62
Identities = 198/749 (26%), Positives = 352/749 (46%), Gaps = 17/749 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
+L+ + +P A P F+ + Q N +Q++V+ DN+L+ APTG+GKT A
Sbjct: 499 KLVKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKTNVA 552
Query: 3782 EFAVLRN---HQKGLNGIM-----RVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
+L+ H+ +G + ++VY+AP++AL E +
Sbjct: 553 VLTILQQIARHRNPNDGSIDHTAYKIVYVAPMKALVAEVVGNLSNRLEKYDVKVRELSGD 612
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 613 QSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESI 671
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
V+R V +++ IR+V LS +L N +D+ ++ + GLF F RPVPL
Sbjct: 672 VART--VRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQY 729
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGE 4474
G+ + R Q M Y ++ A + L+FV +R+ + TA + A+
Sbjct: 730 VGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDAALAND-T 787
Query: 4475 RPLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQ 4645
FL + S E L VK L L +G H G+T D ++V LF G Q
Sbjct: 788 LSRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQ 847
Query: 4646 VCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKC 4825
V V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+
Sbjct: 848 VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 907
Query: 4826 MILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYR 5005
+I+ + +YY + + LP+ES L D LNAE+V G + N +EA +I +T++Y
Sbjct: 908 IIVTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYV 967
Query: 5006 RLSQNPNYYNLQG---VSHRHLSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMV 5173
R+ +NP+ Y + L + ++L+ + L+ + + + +LG +
Sbjct: 968 RMLRNPSLYGIAPDVLTKDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRI 1027
Query: 5174 GS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYS 5353
S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1028 ASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIP 1087
Query: 5354 FENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLD 5530
+ +P K N LL A+ S+ + G ++ SD I SA RLL+A+ +++ GW
Sbjct: 1088 IKE-SLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQSAGRLLRALFEIVVKRGWAQ 1146
Query: 5531 LALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQ 5710
LA + + +MVT+ ++ + L Q ++ + E + E +DL+ + +
Sbjct: 1147 LAEKALNLCKMVTKRMWSVQTPLRQFNGIPNDILTKL-EKKDLAWERYYDLSSQEIGELI 1205
Query: 5711 ELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+M + +F +FP +++ V
Sbjct: 1206 RAPKMG----RTLHKFIHQFPKLNLAAHV 1230
Score = 85.1 bits (209), Expect(2) = 3e-18
Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-----------NES 579
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R D E
Sbjct: 742 QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLSRFLKEDSASREI 801
Query: 580 **VH*S-------EGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
H + L+ A+H GM RT R LVE+L +GH +VL+ TATLAW +NL
Sbjct: 802 LHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNL 861
Query: 739 PAHTL 753
PAHT+
Sbjct: 862 PAHTV 866
Score = 37.7 bits (86), Expect(2) = 3e-18
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 863 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 905
Score = 60.8 bits (146), Expect(2) = 4e-14
Identities = 37/84 (44%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E II+TGHSEL YYL MN QLP+ SQF+ K LA +
Sbjct: 897 GRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFISK-LADQLNAEIVLGTVQNAKE 955
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNP+ +G+
Sbjct: 956 ACHWIGYT-YLYVRMLRNPSLYGI 978
Score = 47.8 bits (112), Expect(2) = 4e-14
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + KDLL YG IH GM RTD LV +L +GH QVLV TATL +
Sbjct: 803 HTHTDLVK--SSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAW 857
Score = 81.3 bits (199), Expect = 6e-12
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVS 1931
R Q M Y + A + L+FV +RK TA + + A+ + FL
Sbjct: 1579 RMQAMTKPTYTAIAQHAKNRKPALVFVPTRKHVRLTAVDMITYSGADSSEKPFLLRPI-- 1636
Query: 1932 REILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWG 2111
E L+ V LK L G + G+ D ++V LF G +QV V ++++ WG
Sbjct: 1637 -EELEPFINKVSDEMLKVTLREGVGYLHEGLDNLDHDIVAQLFEAGWIQVCVLSSSMCWG 1695
Query: 2112 VNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXX 2291
V L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1696 VTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEY 1755
Query: 2292 XXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1756 YKKFLYEAFPVESHLHHFLHDNL 1778
>ref|XP_006849925.1| hypothetical protein AMTR_s00022p00114710 [Amborella trichopoda]
gi|548853523|gb|ERN11506.1| hypothetical protein
AMTR_s00022p00114710 [Amborella trichopoda]
Length = 2171
Score = 1988 bits (5149), Expect = 0.0
Identities = 979/1266 (77%), Positives = 1101/1266 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC WL YTYLYIRMLRNP LYGL DA+ +D+TLEERRADL
Sbjct: 925 NAEIVLGTVQNAREACTWLGYTYLYIRMLRNPVLYGLTTDAIEKDKTLEERRADL----- 979
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
+H AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYISHGTISTY+EHL
Sbjct: 980 -----------VHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 1028
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIPVKESLEEP AKINVLLQA
Sbjct: 1029 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPCAKINVLLQA 1088
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSL SDMV+ITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+VGK+MW+V
Sbjct: 1089 YISQLKLEGLSLASDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVGKRMWSV 1148
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF GIP DIL K+EK+++AWE YYDLSSQEI +L PK+GK LHK+IHQFPKLN
Sbjct: 1149 QTPLRQFKGIPNDILMKIEKKDLAWERYYDLSSQEIGELIRFPKMGKTLHKFIHQFPKLN 1208
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAA++QPITRTVLRVELTITPDF W+++VHGYVEPFWVIVEDNDGE+ILHHEYFM K QY
Sbjct: 1209 LAANVQPITRTVLRVELTITPDFQWDEKVHGYVEPFWVIVEDNDGEYILHHEYFMQKMQY 1268
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1269 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1328
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP EALYQ+F HFNPIQTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1329 PLPVTALRNPSCEALYQDFKHFNPIQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFALLR 1388
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + IMRVVYIAP+EALAKERY DW ATDLKLLEK QV
Sbjct: 1389 NHQKGPDSIMRVVYIAPIEALAKERYRDWEQKFGKGLGLRVVELTGETATDLKLLEKAQV 1448
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+I TPEKWD+LSR WK RKHVQQVSLFI+D VSRMRY++S E
Sbjct: 1449 IIGTPEKWDALSRRWKQRKHVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYISS--QVE 1506
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQG+DIANFEAR QAM
Sbjct: 1507 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAM 1566
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTA+VQHA+ GKPAL++VPTR+ +RLTA D VTY+NA+SGE+ FLL+ EE LEPF
Sbjct: 1567 TKPTYTAVVQHAKVGKPALVYVPTRKHARLTALDLVTYANAESGEKSSFLLQPEEVLEPF 1626
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
IS+V EP LSA LRHG+GY+HEGL+S+D ++VSHLF AG IQVCV+SSSMCWG L AHL
Sbjct: 1627 ISRVSEPALSAALRHGVGYIHEGLSSIDQDVVSHLFSAGCIQVCVSSSSMCWGTPLLAHL 1686
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYP+ DLLQMMGHA+RPL DNSGKC+ILCHAP+KEYY+KF+YE
Sbjct: 1687 VVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRKEYYKKFVYE 1746
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
+ PVESHLQH+LHDNLNAEVV G+I +KQ+AVDY+TWTFMYRRLSQNPNYYNLQGVSHRH
Sbjct: 1747 SFPVESHLQHFLHDNLNAEVVVGIIESKQDAVDYLTWTFMYRRLSQNPNYYNLQGVSHRH 1806
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT+S+LEASKC+++EE +DLSPLNLGM+ S Y ISYTT+ERF+S LT+KT
Sbjct: 1807 LSDHLSELVENTLSNLEASKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSLLTAKT 1866
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGL+EILASASEYA+LP RPGEEE+IR+LINHQR+S E PR TDPH+KANALL AHFS
Sbjct: 1867 KLKGLIEILASASEYADLPIRPGEEEMIRKLINHQRFSVEKPRYTDPHLKANALLQAHFS 1926
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
RHTVVGNL +DQRE+L+SA+RLLQAMVDVISSNGWL LAL ME+SQMVTQ ++++DS+L
Sbjct: 1927 RHTVVGNLAADQREVLLSANRLLQAMVDVISSNGWLVLALSAMELSQMVTQSMWDKDSVL 1986
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFT+ELAK+C+ENPGKSIET+FDL EM+DD+R++LLQMSD QLLDIA++C RFPNI
Sbjct: 1987 LQLPHFTRELAKKCKENPGKSIETIFDLLEMEDDERRDLLQMSDSQLLDIAKYCNRFPNI 2046
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
DM+YEVLE TLERDL SEVGPVDAPRYPK KEEGWWLVVGD K N
Sbjct: 2047 DMSYEVLEGEVAGAGENVILQVTLERDLEGRSEVGPVDAPRYPKAKEEGWWLVVGDFKLN 2106
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRKSKVKLEF APSE G+K YTLYFMCDSYLGCDQEY+FTIDVKEA E G
Sbjct: 2107 QLLAIKRVSLQRKSKVKLEFPAPSEVGKKEYTLYFMCDSYLGCDQEYNFTIDVKEAME-G 2165
Query: 6140 DDSGRQ 6157
D G +
Sbjct: 2166 DGGGNE 2171
Score = 357 bits (915), Expect(2) = 2e-97
Identities = 190/270 (70%), Positives = 211/270 (78%), Gaps = 3/270 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV D + + +YIGIT KKPLQRFQLMNDICY+
Sbjct: 674 LSATLPNYQDVALFLRVDKDKGLFHFDNSYRPCPLAQQYIGITVKKPLQRFQLMNDICYK 733
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV A AGKHQVL+FVHSRKET KTARAIRD ALANDTL RFLKEDSVSREILQ+E+ +V+
Sbjct: 734 KVEAIAGKHQVLVFVHSRKETAKTARAIRDTALANDTLGRFLKEDSVSREILQSEAENVK 793
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
S +LKDLLPYGFAIH+AGM R DR LVE LF +QVLV TATLAWGVNL AHTVIIKG
Sbjct: 794 STELKDLLPYGFAIHHAGMTRADRTLVEELFSDSHIQVLVSTATLAWGVNLPAHTVIIKG 853
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKG WTELSPLDV QMLGRAGRPQYDT EGII+TGHSE MN QLPIE
Sbjct: 854 TQIYNPEKGIWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNEQLPIE 913
Query: 2328 SQFVSKLADQLMLKLFLEQFRVLKKHATGL 2417
SQFVSKLADQL ++ L + ++ T L
Sbjct: 914 SQFVSKLADQLNAEIVLGTVQNAREACTWL 943
Score = 30.4 bits (67), Expect(2) = 2e-97
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ R + Y + V EL GDQ+L+ ++ + E + + T
Sbjct: 577 NLSKRLQAYGVSVKELTGDQTLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 636
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIV+RT+R +ET KEHI
Sbjct: 637 VDEIHLLHDNR--GPVLESIVSRTVRQIETTKEHI 669
Score = 256 bits (655), Expect = 8e-65
Identities = 204/750 (27%), Positives = 344/750 (45%), Gaps = 18/750 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
EL+ + LP A + + E N +Q++V+ T +N+L+ APTG+GKT A
Sbjct: 483 ELIKIAVLPEWA------QPAFSEMKQLNRVQSRVYETALFTPENILLCAPTGAGKTNVA 536
Query: 3782 EFAVLRNHQKGL---------NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXX 3934
+L+ Q GL N ++VY+AP++AL E +
Sbjct: 537 MLTILQ--QLGLHRNADGSFDNSSYKIVYVAPMKALVAEVVGN-LSKRLQAYGVSVKELT 593
Query: 3935 XXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXX 4114
+ +E+ Q++++TPEKWD ++R R + Q V L I+D
Sbjct: 594 GDQTLSRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLES 653
Query: 4115 XVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGA-TSHGLFNFPPGVRPVPLEIH 4291
VSR V ++ IR+V LS +L N +D+ ++ GLF+F RP PL
Sbjct: 654 IVSRT--VRQIETTKEHIRLVGLSATLPNYQDVALFLRVDKDKGLFHFDNSYRPCPLAQQ 711
Query: 4292 IQGVDIANFEARKQAMTRPTYTAIVQHARNGK-PALMFVPTRRRSRLTAADF--VTYSNA 4462
G+ + R Q M Y + A GK L+FV +R+ + TA +N
Sbjct: 712 YIGITVKKPLQRFQLMNDICYKKV--EAIAGKHQVLVFVHSRKETAKTARAIRDTALAND 769
Query: 4463 DSGERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWI 4642
G S E L+ VK L L +G H G+T D +V LF I
Sbjct: 770 TLGRFLKEDSVSREILQSEAENVKSTELKDLLPYGFAIHHAGMTRADRTLVEELFSDSHI 829
Query: 4643 QVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGK 4822
QV V+++++ WG+ LPAH V++ GTQ Y+ + I T+ D++QM+G A RP D G+
Sbjct: 830 QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGIWTELSPLDVMQMLGRAGRPQYDTYGE 889
Query: 4823 CMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMY 5002
+IL + +YY + E LP+ES L D LNAE+V G + N +EA ++ +T++Y
Sbjct: 890 GIILTGHSELQYYLSLMNEQLPIESQFVSKLADQLNAEIVLGTVQNAREACTWLGYTYLY 949
Query: 5003 RRLSQNPNYYNLQG---VSHRHLSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGM 5170
R+ +NP Y L + L + ++LV + + L+ + + + +LG
Sbjct: 950 IRMLRNPVLYGLTTDAIEKDKTLEERRADLVHSAATILDKNNLVKYDRKSGYFQVTDLGR 1009
Query: 5171 VGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRY 5350
+ S Y IS+ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1010 IASYYYISHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPI 1069
Query: 5351 SFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWL 5527
+ +P K N LL A+ S+ + G +L SD I SA RLL+A+ +++ GW
Sbjct: 1070 PVKE-SLEEPCAKINVLLQAYISQLKLEGLSLASDMVYITQSAGRLLRALFEIVLKRGWA 1128
Query: 5528 DLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKR 5707
LA + + +MV + ++ + L Q ++ + E + E +DL+ + +
Sbjct: 1129 QLAEKALNLCKMVGKRMWSVQTPLRQFKGIPNDILMKI-EKKDLAWERYYDLSSQEIGEL 1187
Query: 5708 QELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+M + +F +FP +++ V
Sbjct: 1188 IRFPKMGK----TLHKFIHQFPKLNLAANV 1213
Score = 81.6 bits (200), Expect(2) = 1e-17
Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-------------- 570
Q+ NDICY+KV A AG+ QV +FVHSRKE KT R D
Sbjct: 725 QLMNDICYKKVEAIAGKHQVLVFVHSRKETAKTARAIRDTALANDTLGRFLKEDSVSREI 784
Query: 571 --NES**VH*SE--GLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
+E+ V +E L+ A+H GM R R LVEEL + H++VL+ TATLAW +NL
Sbjct: 785 LQSEAENVKSTELKDLLPYGFAIHHAGMTRADRTLVEELFSDSHIQVLVSTATLAWGVNL 844
Query: 739 PAHTL 753
PAHT+
Sbjct: 845 PAHTV 849
Score = 39.3 bits (90), Expect(2) = 1e-17
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+DT G
Sbjct: 846 AHTVIIKGTQIYNPEKGIWTELSPLDVMQMLGRAGRPQYDTYG 888
Score = 64.3 bits (155), Expect(2) = 2e-15
Identities = 40/84 (47%), Positives = 47/84 (55%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+DT E II+TGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 880 GRPQYDTYGEGIILTGHSELQYYLSLMNEQLPIESQFVSK-LADQLNAEIVLGTVQNARE 938
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL++ M RNP +GL
Sbjct: 939 ACTWLGYT-YLYIRMLRNPVLYGL 961
Score = 48.9 bits (115), Expect(2) = 2e-15
Identities = 27/45 (60%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 898 ESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
E KDLL YG IH GM R D LV EL + HIQVLV TATL +
Sbjct: 796 ELKDLLPYGFAIHHAGMTRADRTLVEELFSDSHIQVLVSTATLAW 840
Score = 86.3 bits (212), Expect = 2e-13
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 3/205 (1%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALAND-TLSRFLKEDS 1925
R Q M Y VV A+ GK L++V +RK TA + A A S FL +
Sbjct: 1562 RMQAMTKPTYTAVVQHAKVGK-PALVYVPTRKHARLTALDLVTYANAESGEKSSFLLQPE 1620
Query: 1926 VSREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLA 2105
E+L+ V L L +G + G++ D+++V LF G +QV V ++++
Sbjct: 1621 ---EVLEPFISRVSEPALSAALRHGVGYIHEGLSSIDQDVVSHLFSAGCIQVCVSSSSMC 1677
Query: 2106 WGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEX 2285
WG LLAH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1678 WGTPLLAHLVVVMGTQYYDGRENAHTDYPITDLLQMMGHASRPLQDNSGKCVILCHAPRK 1737
Query: 2286 XXXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1738 EYYKKFVYESFPVESHLQHFLHDNL 1762
>ref|XP_007149260.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|593697576|ref|XP_007149261.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022524|gb|ESW21254.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 1987 bits (5147), Expect = 0.0
Identities = 971/1266 (76%), Positives = 1099/1266 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNW+ YTYLY+RMLRNP+LYG+ D L+RD TLEERRADL
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADL----- 992
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AA++L++NNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 993 -----------IHTAASILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1041
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1101
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSV 1161
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GI D+L+K+EK+++AWE YYDLSSQEI +L PK+G+ LH++IHQFPKLN
Sbjct: 1162 QTPLRQFNGISSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHRFIHQFPKLN 1221
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF W+DR+HGYVEPFWVIVEDNDGE+ILHHE+FMLKKQY
Sbjct: 1222 LAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEFFMLKKQY 1281
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+ VVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1282 IDEDHTLNFTVPIYEPLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1341
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1342 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1401
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQK + +MRVVY+AP+E+LAKERY DW ATDLKLLEKGQ+
Sbjct: 1402 NHQKVPDSVMRVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQI 1461
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK VQ VSLFIID VSRMRY+AS E
Sbjct: 1462 IISTPEKWDALSRRWKQRKQVQLVSLFIIDELHLIGGQGGPILEVVVSRMRYIAS--QVE 1519
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1520 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1579
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+N KPAL+FVPTR+ RLTA D +TYS ADSGE+P FLL+ EELEPF
Sbjct: 1580 TKPTYTAIVQHAKNRKPALIFVPTRKHVRLTAVDLITYSGADSGEKP-FLLRPPEELEPF 1638
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+++ ML TLR G+GYLHEGL S+D +IV+ LFDAGWIQVCV +SSMCWG+ L AHL
Sbjct: 1639 LEKIRDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWGVTLSAHL 1698
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN TDYPV DLLQMMGHA+RPL+DNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1699 VVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYE 1758
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDNLNAE+V G+I NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1759 AFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1818
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE+VENT+SDLEASKC+++EE +DLSPLNLGM+ S Y ISYTT+ERF+SS+TSKT
Sbjct: 1819 LSDHLSEMVENTLSDLEASKCITIEEDMDLSPLNLGMIASYYYISYTTIERFSSSVTSKT 1878
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEIL+SASEYA+LP RPGEEE++R+LINHQR+SFENP+ TDPHVKANALL AHFS
Sbjct: 1879 KMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFS 1938
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQ+E+L+SA+RLLQAMVDVISSNGWL LALLTMEVSQMVTQG++ERDSML
Sbjct: 1939 RQFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSML 1998
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAK+CQENPGKSIETVFDL EM+DD+R ELL MSD QLLDIARFC RFPNI
Sbjct: 1999 LQLPHFTKDLAKKCQENPGKSIETVFDLLEMEDDERHELLGMSDSQLLDIARFCNRFPNI 2058
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++YEVL+ TLERDL +E+GPVDAPRYPK KEEGWWLVVGD+KTN
Sbjct: 2059 DLSYEVLDSDSVRAGEDVTLLVTLERDLEGKTEIGPVDAPRYPKAKEEGWWLVVGDTKTN 2118
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
LLAIKRVSL RK K KLEF AP++ GRKSY LYFMCDSYLGCDQEY FT+DVKEA
Sbjct: 2119 LLLAIKRVSLHRKLKAKLEFAAPADTGRKSYALYFMCDSYLGCDQEYGFTVDVKEADGGD 2178
Query: 6140 DDSGRQ 6157
+DSGR+
Sbjct: 2179 EDSGRE 2184
Score = 362 bits (929), Expect(2) = e-100
Identities = 191/257 (74%), Positives = 208/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +Y+GIT KKPLQRFQLMNDICYE
Sbjct: 687 LSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYE 746
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRDAAL DTL RFLKEDS SREILQT + V+
Sbjct: 747 KVMAVAGKHQVLIFVHSRKETAKTARAIRDAALGKDTLGRFLKEDSASREILQTHTDLVK 806
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM RTDR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 807 SNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 866
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGII+TGHSE MN QLPIE
Sbjct: 867 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIE 926
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 927 SQFVSKLADQLNAEIVL 943
Score = 34.7 bits (78), Expect(2) = e-100
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R ++Y +KV EL GDQSLT ++ + E + + T
Sbjct: 590 NLSNRLQEYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 649
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K++I
Sbjct: 650 IDEIHLLHDNR--GPVLESIVARTVRQIETTKDYI 682
Score = 259 bits (661), Expect = 2e-65
Identities = 207/751 (27%), Positives = 359/751 (47%), Gaps = 19/751 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
+L+ + +P A P F+ + Q N +Q++V++ DN+L+ APTG+GKT A
Sbjct: 495 KLVKISSMPDWA--QPAFKGMSQ----LNRVQSKVYDTALFKPDNLLLCAPTGAGKTNVA 548
Query: 3782 EFAVL------RNHQKGL--NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
+L RN + G + ++VY+AP++AL E +
Sbjct: 549 VLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGD 608
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 609 QSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESI 667
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
V+R V +++ IR+V LS +L N +D+ ++ GLF F RPVPL
Sbjct: 668 VART--VRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQY 725
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGE 4474
G+ + R Q M Y ++ A + L+FV +R+ + TA +A G+
Sbjct: 726 VGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTAR---AIRDAALGK 781
Query: 4475 RPL--FLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGW 4639
L FL + S E L+ VK L L +G H G+T D ++V LF G
Sbjct: 782 DTLGRFLKEDSASREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGH 841
Query: 4640 IQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSG 4819
+QV V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G
Sbjct: 842 VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901
Query: 4820 KCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFM 4999
+ +I+ + +YY + + LP+ES L D LNAE+V G + N +EA ++I +T++
Sbjct: 902 EGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYL 961
Query: 5000 YRRLSQNPNYYNL-QGVSHRH--LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLG 5167
Y R+ +NP+ Y + V R L + ++L+ S L+ + + + +LG
Sbjct: 962 YVRMLRNPSLYGIAPDVLTRDITLEERRADLIHTAASILDRNNLVKYDRKSGYFQVTDLG 1021
Query: 5168 MVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQR 5347
+ S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1022 RIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVP 1081
Query: 5348 YSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGW 5524
+ +P K N LL A+ S+ + G +L SD I SA RLL+A+ +++ GW
Sbjct: 1082 IPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGW 1140
Query: 5525 LDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDK 5704
LA + + +MVT+ ++ + L Q + +L + E + E +DL+ + +
Sbjct: 1141 AQLAEKALNLCKMVTKRMWSVQTPLRQFNGISSDLLTKL-EKKDLAWERYYDLSSQEIGE 1199
Query: 5705 RQELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+M + RF +FP +++ V
Sbjct: 1200 LIRAPKMG----RTLHRFIHQFPKLNLAAHV 1226
Score = 87.8 bits (216), Expect(2) = 4e-19
Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R G D
Sbjct: 738 QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALGKDTLGRFLKEDSASREI 797
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H GM RT R LVE+L +GHV+VL+ TATLAW
Sbjct: 798 LQTHTDLVKS---NDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWG 854
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 855 VNLPAHTV 862
Score = 37.7 bits (86), Expect(2) = 4e-19
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 859 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901
Score = 62.4 bits (150), Expect(2) = 7e-15
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E II+TGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 893 GRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 951
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNP+ +G+
Sbjct: 952 ACNWIGYT-YLYVRMLRNPSLYGI 974
Score = 48.9 bits (115), Expect(2) = 7e-15
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GM RTD LV +L +GH+QVLV TATL +
Sbjct: 811 KDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Score = 83.6 bits (205), Expect = 1e-12
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVS 1931
R Q M Y +V A + LIFV +RK TA + + A+ FL
Sbjct: 1575 RMQAMTKPTYTAIVQHAKNRKPALIFVPTRKHVRLTAVDLITYSGADSGEKPFLLRPP-- 1632
Query: 1932 REILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWG 2111
E L+ +R LK L G + G+ D ++V LF G +QV V +++ WG
Sbjct: 1633 -EELEPFLEKIRDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWG 1691
Query: 2112 VNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXX 2291
V L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1692 VTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEY 1751
Query: 2292 XXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1752 YKKFLYEAFPVESHLHHFLHDNL 1774
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 1983 bits (5137), Expect = 0.0
Identities = 967/1266 (76%), Positives = 1102/1266 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNW+ YTYLY+RMLRNP+LYG+ D L+RD TLEERRADL
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADL----- 992
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L++NNLVKY++KSG FQVTDLGRIAS+YYI+HG+ISTY+EHL
Sbjct: 993 -----------IHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHL 1041
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1101
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSV 1161
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GIP D+L+K+EK+++AWE YYDLSSQEI +L PK+G+ LHK+IHQFPKLN
Sbjct: 1162 QTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKFIHQFPKLN 1221
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF W+DR+HGYVEPFWVIVEDNDGE+ILHHEYFMLKKQY
Sbjct: 1222 LAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFMLKKQY 1281
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSD+WL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1282 IDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1341
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +E+LY++F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1342 PLPVTALRNPSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1401
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQK + +MRVVY+AP+E+LAKERY DW ATDLKLLEKGQ+
Sbjct: 1402 NHQKWPDSVMRVVYVAPIESLAKERYRDWEKKFGGGLKLRVVELTGETATDLKLLEKGQI 1461
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1462 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIAS--QVE 1519
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIR+VALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQG+DIANFEAR QAM
Sbjct: 1520 NKIRVVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDIANFEARMQAM 1579
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+NGKPAL+FVPTR+ RLTA D +TYS ADSGE+P FLL+S EELEPF
Sbjct: 1580 TKPTYTAIVQHAKNGKPALVFVPTRKHVRLTAVDLITYSGADSGEKP-FLLRSAEELEPF 1638
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ + ML TLR G+GYLHEGL S+D +IV+ LF+AGWIQVCV +SSMCWG+ L AHL
Sbjct: 1639 LDKITDEMLKVTLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCWGVTLSAHL 1698
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN TDYPV DLLQMMGHA+RPL+DNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1699 VVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYE 1758
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDNLNAE+V G+I NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1759 AFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1818
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE+VENT+SDLEA KC+++E+ ++L+PLNLGM+ S Y ISYTT+ERF+SS+TSKT
Sbjct: 1819 LSDHLSEMVENTLSDLEAGKCITIEDDMELAPLNLGMIASYYYISYTTIERFSSSVTSKT 1878
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEIL+SASEYA+LP RPGEEE++R+LINHQR+SFENP+ TDPHVK NALL AHFS
Sbjct: 1879 KMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKTNALLQAHFS 1938
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQ+E+L+SA+RLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1939 RQFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLGLALLAMEVSQMVTQGMWERDSML 1998
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAK+CQENPGKSIETVFDL EM+D++RQELL MSD QLLDIARFC RFPNI
Sbjct: 1999 LQLPHFTKDLAKKCQENPGKSIETVFDLLEMEDNERQELLGMSDSQLLDIARFCNRFPNI 2058
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++YEVL+ TLERDL +EVGPVDAPRYPK KEEGWWL+VGD+KTN
Sbjct: 2059 DLSYEVLDSDNVRAGEVVTVLVTLERDLEGRTEVGPVDAPRYPKAKEEGWWLIVGDTKTN 2118
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
LLAIKRVSLQR+ K KLEF AP++AGRKSY+LYFMCDSYLGCDQEY FTIDV G
Sbjct: 2119 LLLAIKRVSLQRRLKAKLEFDAPADAGRKSYSLYFMCDSYLGCDQEYGFTIDVNADG-GD 2177
Query: 6140 DDSGRQ 6157
DSGR+
Sbjct: 2178 QDSGRE 2183
Score = 362 bits (930), Expect(2) = e-100
Identities = 191/257 (74%), Positives = 208/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +Y+GIT KKPLQRFQLMNDICYE
Sbjct: 687 LSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYE 746
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRD ALANDTL RFLKEDS SREIL T + V+
Sbjct: 747 KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREILHTHTDLVK 806
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM RTDR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 807 SNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 866
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGII+TGHSE MN QLPIE
Sbjct: 867 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIE 926
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 927 SQFVSKLADQLNAEIVL 943
Score = 33.9 bits (76), Expect(2) = e-100
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQSLT ++ + E + + T
Sbjct: 590 NLSNRLQDYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 649
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K++I
Sbjct: 650 IDEIHLLHDNR--GPVLESIVARTVRQIETTKDYI 682
Score = 252 bits (644), Expect = 1e-63
Identities = 200/748 (26%), Positives = 352/748 (47%), Gaps = 16/748 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
+L+ + +P A P F+ + Q N +Q++V+ DN+L+ APTG+GKT A
Sbjct: 495 KLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFQPDNLLLCAPTGAGKTNVA 548
Query: 3782 EFAVLRN---HQKGLNGIM-----RVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
+L+ H+ +G + ++VY+AP++AL E +
Sbjct: 549 VLTILQQIARHRNPKDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYDVKVRELSGD 608
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 609 QSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESI 667
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
V+R V +++ IR+V LS +L N +D+ ++ GLF F RPVPL
Sbjct: 668 VART--VRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQY 725
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADS 4468
G+ + R Q M Y ++ A + L+FV +R+ + TA +N
Sbjct: 726 VGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDTALANDTL 784
Query: 4469 GERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQV 4648
G S E L VK L L +G H G+T D ++V LF G +QV
Sbjct: 785 GRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQV 844
Query: 4649 CVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCM 4828
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+ +
Sbjct: 845 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGI 904
Query: 4829 ILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRR 5008
I+ + +YY + + LP+ES L D LNAE+V G + N +EA ++I +T++Y R
Sbjct: 905 IVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVR 964
Query: 5009 LSQNPNYYNL-QGVSHRH--LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVG 5176
+ +NP+ Y + V R L + ++L+ + L+ + + + +LG +
Sbjct: 965 MLRNPSLYGIAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIA 1024
Query: 5177 S*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSF 5356
S Y I++ ++ +N L L + + + E+ + R E+ + +L++
Sbjct: 1025 SYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI 1084
Query: 5357 ENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
+ +P K N LL A+ S+ + G +L SD I SA RLL+A+ +++ GW L
Sbjct: 1085 KE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQL 1143
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
A + + +MVT+ ++ + L Q +L + E + E +DL+ + +
Sbjct: 1144 AEKALNLCKMVTKRMWSVQTPLRQFNGIPSDLLTKL-EKKDLAWERYYDLSSQEIGELIR 1202
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+M + +F +FP +++ V
Sbjct: 1203 APKMG----RTLHKFIHQFPKLNLAAHV 1226
Score = 87.8 bits (216), Expect(2) = 4e-19
Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R G D
Sbjct: 738 QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLGRFLKEDSASREI 797
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H GM RT R LVE+L +GHV+VL+ TATLAW
Sbjct: 798 LHTHTDLVKS---NDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWG 854
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 855 VNLPAHTV 862
Score = 37.7 bits (86), Expect(2) = 4e-19
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 859 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901
Score = 62.4 bits (150), Expect(2) = 5e-15
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E II+TGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 893 GRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 951
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNP+ +G+
Sbjct: 952 ACNWIGYT-YLYVRMLRNPSLYGI 974
Score = 49.3 bits (116), Expect(2) = 5e-15
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + + KDLL YG IH GM RTD LV +L +GH+QVLV TATL +
Sbjct: 799 HTHTDLVKSN--DLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Score = 84.0 bits (206), Expect = 9e-13
Identities = 64/204 (31%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y +V A+ GK L+FV +RK TA + + A+ FL
Sbjct: 1575 RMQAMTKPTYTAIVQHAKNGK-PALVFVPTRKHVRLTAVDLITYSGADSGEKPFLLR--- 1630
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + LK L G + G+ DR++V LF G +QV V +++ W
Sbjct: 1631 SAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDRDIVTQLFEAGWIQVCVLNSSMCW 1690
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1691 GVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1750
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1751 YYKKFLYEAFPVESHLHHFLHDNL 1774
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 1982 bits (5136), Expect = 0.0
Identities = 975/1270 (76%), Positives = 1095/1270 (86%), Gaps = 4/1270 (0%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC+WL YTYLYIRMLRNPTLYGL D L+RD TLEERRADL
Sbjct: 906 NAEIVLGTVQNAREACHWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADL----- 960
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AA +L+KNNLVKY++KSG FQ TDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 961 -----------IHSAAAILDKNNLVKYDRKSGYFQGTDLGRIASYYYITHGTISTYNEHL 1009
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1010 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1069
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRLM+A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1070 YISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVNKRMWSV 1129
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP +IL K+EK++++W+ YYDL QEI +L PK+G+ L+K+IHQFPKLN
Sbjct: 1130 QTPLRQFHGIPNEILMKLEKKDLSWDRYYDLKPQEIGELIRFPKMGRTLYKFIHQFPKLN 1189
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTIT DF WED VHGYVEPFWVIVEDNDG++ILHHEYFMLKKQY
Sbjct: 1190 LAAHVQPITRTVLRVELTITADFQWEDNVHGYVEPFWVIVEDNDGDYILHHEYFMLKKQY 1249
Query: 3440 IDE----DHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTEL 3607
+DE D TLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTEL
Sbjct: 1250 VDEHQVVDLTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTEL 1309
Query: 3608 LDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEF 3787
LDLQPLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEF
Sbjct: 1310 LDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEF 1369
Query: 3788 AVLRNHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLE 3967
A+LRNHQKG +MR VYIAP+EA+A+ERY DW ATDLKLLE
Sbjct: 1370 AILRNHQKGPESVMRAVYIAPLEAIARERYRDWERKFGRGLGMRVVELTGETATDLKLLE 1429
Query: 3968 KGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASC 4147
KGQ++ISTPEKWD+LSR WK RK+VQQVSLFIID VSRMRY+AS
Sbjct: 1430 KGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS- 1488
Query: 4148 NLSENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR 4327
ENKIRIVALS+SLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR
Sbjct: 1489 -QIENKIRIVALSSSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR 1547
Query: 4328 KQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEE 4507
QAMT+PTYT+IVQHA+NGKPA++FVPTR+ RL A D +TYS+ D GE+P FLL+S EE
Sbjct: 1548 MQAMTKPTYTSIVQHAKNGKPAIVFVPTRKHVRLAAVDLMTYSSMDGGEKPPFLLRSIEE 1607
Query: 4508 LEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMAL 4687
LEPFI K++E ML ATL HG+GYLHEGL+S+D E+VS LF+AGWIQVCV SSSMCWG+ L
Sbjct: 1608 LEPFIGKIQEEMLRATLHHGIGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPL 1667
Query: 4688 PAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRK 4867
AHLVVVMGTQYYDG+EN HTDYPV DLLQMMGHA+RPLLDNSGKC+I CHAP+KEYY+K
Sbjct: 1668 SAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVIFCHAPRKEYYKK 1727
Query: 4868 FLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGV 5047
FLYEA PVESHL H+LHDN NAEVV GVI NKQ+AVDY+TWTF YRRL+QNPNYYNLQGV
Sbjct: 1728 FLYEAFPVESHLHHFLHDNFNAEVVAGVIENKQDAVDYLTWTFTYRRLTQNPNYYNLQGV 1787
Query: 5048 SHRHLSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSL 5227
SHRHLSDHLSELVENT++DLE SKC+++EE +DLSPLNLGM+ S Y ISYTT+ERF+SSL
Sbjct: 1788 SHRHLSDHLSELVENTLTDLERSKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSL 1847
Query: 5228 TSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLH 5407
T KTK+KGLLEIL+SASEYA+LP RPGEEE++RRLINHQR+SFENPR DPHVKAN LL
Sbjct: 1848 TPKTKMKGLLEILSSASEYAQLPIRPGEEEVLRRLINHQRFSFENPRYADPHVKANVLLQ 1907
Query: 5408 AHFSRHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFER 5587
AHFSR +V GNL DQRE+L+S SRLLQAMVDVISSNGWL LALL MEVSQMVTQG++ER
Sbjct: 1908 AHFSRQSVGGNLALDQREVLLSGSRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWER 1967
Query: 5588 DSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCER 5767
DSMLLQLPHFTK++AKRCQENPGKSIETVFDL EM+DD+R+ELLQMSD QLLDI RFC R
Sbjct: 1968 DSMLLQLPHFTKDMAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDSQLLDIVRFCNR 2027
Query: 5768 FPNIDMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGD 5947
FPNIDM+YEV++ TLERDL +EVGPVD+PRYPK KEEGWWLVVGD
Sbjct: 2028 FPNIDMSYEVMDGDNVRAGEDITLLVTLERDLEGRTEVGPVDSPRYPKAKEEGWWLVVGD 2087
Query: 5948 SKTNQLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEA 6127
+K+NQLLAIKRVSLQRKSKVKLEF AP++ GRKSYTLYFMCDSYLGCDQEY+F++DV EA
Sbjct: 2088 TKSNQLLAIKRVSLQRKSKVKLEFAAPADTGRKSYTLYFMCDSYLGCDQEYNFSVDVGEA 2147
Query: 6128 GEAGDDSGRQ 6157
+DSGR+
Sbjct: 2148 AGPDEDSGRE 2157
Score = 358 bits (919), Expect(2) = 5e-98
Identities = 189/257 (73%), Positives = 208/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PN++D+ALF RV D + + + +YIGI KKPLQRFQLMNDICYE
Sbjct: 655 LSATLPNFEDVALFLRVDLDKGLFHFDNSYRPVPLSQQYIGINIKKPLQRFQLMNDICYE 714
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+ AGKHQVLIFVHSRKET KTARAIRD ALANDTLSRFL+EDS SREILQT + V+
Sbjct: 715 KVMDVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSRFLREDSASREILQTHTELVK 774
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFA+H+AGM R DR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 775 SNDLKDLLPYGFAVHHAGMTRGDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 834
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 835 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 894
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 895 SQFISKLADQLNAEIVL 911
Score = 31.2 bits (69), Expect(2) = 5e-98
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 1552 GGIHASIVARTIRLVETIKEHI 1617
G + SIVART+R +ET KEHI
Sbjct: 629 GPVLESIVARTVRQIETTKEHI 650
Score = 233 bits (593), Expect = 1e-57
Identities = 201/762 (26%), Positives = 350/762 (45%), Gaps = 18/762 (2%)
Frame = +2
Query: 3566 HLILPEKYPLPTELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLV 3745
H+ ++ P+P + ++ + P F+ + Q N +Q++V+ DNVL+
Sbjct: 477 HVPALKQKPIPPDERFVKISEMPDWAQPAFKGMQQ----LNRVQSKVYETALFKADNVLL 532
Query: 3746 AAPTGSGKT------ICAEFAVLRNHQKGLNGI-MRVVYIAPVEALAKERYHDWXXXXXX 3904
APTG+GKT I + A+ RN N ++VY+AP++AL E +
Sbjct: 533 CAPTGAGKTNVAVLTILQQIALNRNPDGSFNNNNYKIVYVAPMKALVAEVVGNLSN---- 588
Query: 3905 XXXXXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXX 4084
+L E G +WD ++R R + Q V L IID
Sbjct: 589 -----------------RLQEYGV-------QWDIITRKSGDRTYTQLVKLLIIDEIHLL 624
Query: 4085 XXXXXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPP 4261
V+R V ++ IR+V LS +L N +D+ ++ GLF+F
Sbjct: 625 HDNRGPVLESIVART--VRQIETTKEHIRLVGLSATLPNFEDVALFLRVDLDKGLFHFDN 682
Query: 4262 GVRPVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAAD 4441
RPVPL G++I R Q M Y ++ A + L+FV +R+ + TA
Sbjct: 683 SYRPVPLSQQYIGINIKKPLQRFQLMNDICYEKVMDVAGKHQ-VLIFVHSRKETAKTARA 741
Query: 4442 FVTYSNADSGERPLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEI 4612
+ A+ FL + S E L+ VK L L +G H G+T D ++
Sbjct: 742 IRDTALAND-TLSRFLREDSASREILQTHTELVKSNDLKDLLPYGFAVHHAGMTRGDRQL 800
Query: 4613 VSHLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHA 4792
V LF G +QV V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A
Sbjct: 801 VEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRA 860
Query: 4793 TRPLLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEA 4972
RP D+ G+ +I+ + +YY + + LP+ES L D LNAE+V G + N +EA
Sbjct: 861 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREA 920
Query: 4973 VDYITWTFMYRRLSQNPNYYNL-QGVSHRH--LSDHLSELVENTISDLEASKCLSVEEGI 5143
++ +T++Y R+ +NP Y L V R L + ++L+ + + L+ + + +
Sbjct: 921 CHWLGYTYLYIRMLRNPTLYGLAPDVLTRDITLEERRADLIHSAAAILDKNNLVKYDRKS 980
Query: 5144 D-LSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEEL 5320
+LG + S Y I++ T+ +N L L + + + E+ + R E+
Sbjct: 981 GYFQGTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKME 1040
Query: 5321 IRRLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAM 5497
+ +L++ + +P K N LL A+ S+ + G +L SD I SA RL++A+
Sbjct: 1041 LAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLMRAL 1099
Query: 5498 VDVISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVF 5677
+++ GW LA + + +MV + ++ + L Q E+ + E S + +
Sbjct: 1100 FEIVLKRGWAQLAEKALNLCKMVNKRMWSVQTPLRQFHGIPNEILMKL-EKKDLSWDRYY 1158
Query: 5678 DLAEMDDDKRQELLQMSDLQLL--DIARFCERFPNIDMTYEV 5797
DL K QE+ ++ + + +F +FP +++ V
Sbjct: 1159 DL------KPQEIGELIRFPKMGRTLYKFIHQFPKLNLAAHV 1194
Score = 82.0 bits (201), Expect(2) = 2e-17
Identities = 56/125 (44%), Positives = 67/125 (53%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-------------- 570
Q+ NDICYEKVM AG+ QV IFVHSRKE KT R D
Sbjct: 706 QLMNDICYEKVMDVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSRFLREDSASREI 765
Query: 571 ----NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
E + + L+ AVH GM R R LVE+L +GHV+VL+ TATLAW +NL
Sbjct: 766 LQTHTELVKSNDLKDLLPYGFAVHHAGMTRGDRQLVEDLFADGHVQVLVSTATLAWGVNL 825
Query: 739 PAHTL 753
PAHT+
Sbjct: 826 PAHTV 830
Score = 37.7 bits (86), Expect(2) = 2e-17
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 827 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 869
Score = 64.3 bits (155), Expect(2) = 2e-14
Identities = 40/84 (47%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQF+ K LA R
Sbjct: 861 GRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFISK-LADQLNAEIVLGTVQNARE 919
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL++ M RNPT +GL
Sbjct: 920 ACHWLGYT-YLYIRMLRNPTLYGL 942
Score = 45.8 bits (107), Expect(2) = 2e-14
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG +H GM R D LV +L +GH+QVLV TATL +
Sbjct: 779 KDLLPYGFAVHHAGMTRGDRQLVEDLFADGHVQVLVSTATLAW 821
Score = 81.6 bits (200), Expect = 4e-12
Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRF---LKE 1919
R Q M Y +V A+ GK ++FV +RK +R AA+ T S K
Sbjct: 1547 RMQAMTKPTYTSIVQHAKNGK-PAIVFVPTRKH-------VRLAAVDLMTYSSMDGGEKP 1598
Query: 1920 DSVSREILQTES--GHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFT 2093
+ R I + E G ++ L+ L +G + G++ D+E+V LF G +QV V +
Sbjct: 1599 PFLLRSIEELEPFIGKIQEEMLRATLHHGIGYLHEGLSSLDQEVVSQLFEAGWIQVCVMS 1658
Query: 2094 ATLAWGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITG 2273
+++ WGV L AH V++ GTQ Y+ ++ A T+ D+ QM+G A RP D S + +I
Sbjct: 1659 SSMCWGVPLSAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVIFCH 1718
Query: 2274 HSEXXXXXXXMNNQLPIESQFVSKLAD 2354
+ P+ES L D
Sbjct: 1719 APRKEYYKKFLYEAFPVESHLHHFLHD 1745
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 1982 bits (5135), Expect = 0.0
Identities = 970/1262 (76%), Positives = 1098/1262 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EA NWL YTYLY+RMLRNPTLYGL ADA +RD TLEERRADL
Sbjct: 931 NAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRDITLEERRADL----- 985
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 986 -----------IHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1034
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KP MGDIELCR+F LS+EFKYVTVRQDEKMELAKLL VPIP+KESLEEPSAKINVLLQA
Sbjct: 1035 KPMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQA 1094
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRLM+A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1095 YISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSV 1154
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGI DIL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKLN
Sbjct: 1155 QTPLRQFHGISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLN 1214
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVE FWV+VEDNDGEFI HHE+F+LKKQY
Sbjct: 1215 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVESFWVLVEDNDGEFIHHHEHFLLKKQY 1274
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPI EPLPPQYF+RVVSD+WL SQ++LPVSFRHLILPEK+P PTELLDLQ
Sbjct: 1275 IDEDHTLNFTVPICEPLPPQYFIRVVSDRWLGSQTILPVSFRHLILPEKFPPPTELLDLQ 1334
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1335 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1394
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
N+QKG + ++R VYIAP+E+LAKERY DW ATDLKLLE+GQ+
Sbjct: 1395 NYQKGQDNVLRAVYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQI 1454
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK+VQQVSLFIID VSRMRY+AS E
Sbjct: 1455 IISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QIE 1512
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKD+G+WIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1513 NKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+NGKPA++FVPTR+ RLTA D +TYS+AD+GE+ FLL+S E++EPF
Sbjct: 1573 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPFLLRSLEDIEPF 1632
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ + ML A LRHG+GYLHEGL+S+D E+V+ LF+AGWIQVCV SSSMCWG+ L AHL
Sbjct: 1633 VDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHL 1692
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DL+QMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1693 VVVMGTQYYDGRENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1752
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDN+NAE+V G+I NKQ+AVDYITWT MYRRL+QNPNYYNLQGVSHRH
Sbjct: 1753 AFPVESHLHHFLHDNINAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQGVSHRH 1812
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVE+T+SDLEASKC+S+E+ +DLSP NLGM+ S Y ISYTT+ERF+SSLT+KT
Sbjct: 1813 LSDHLSELVEHTLSDLEASKCISIEDDMDLSPSNLGMIASYYYISYTTIERFSSSLTAKT 1872
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA LP RPGEEELIRRLINHQR+SFENP+CTDPHVKANALL A+FS
Sbjct: 1873 KMKGLLEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFS 1932
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R +V GNL DQRE+++SASRLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1933 RQSVGGNLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSML 1992
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAKRCQEN GK+IET+FDL EM+D++R ELLQMSD QLLDIARFC RFPNI
Sbjct: 1993 LQLPHFTKELAKRCQENSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNI 2052
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
DM YEVL+ TLERDL +EVGPVDA RYPK KEEGWWLVVGD+K+N
Sbjct: 2053 DMAYEVLDGENVAAGENVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSN 2112
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRK+KVKL+F AP++ G+KSYTLYFMCDSYLGCDQEYSFT+DVK+A
Sbjct: 2113 QLLAIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFD 2172
Query: 6140 DD 6145
+D
Sbjct: 2173 ED 2174
Score = 355 bits (910), Expect(2) = 2e-98
Identities = 187/257 (72%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHLL---KYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 680 LSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMNDLCYE 739
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV++ AGKHQVLIFVHSRKET KTARAIRDAALANDTLSRFLKEDS SREIL T + V+
Sbjct: 740 KVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREILHTHTDLVK 799
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SN+LKDLLPYGFAIH+AGM R DR+LVE LF G +QVLV TATLAWGVNL AH VIIKG
Sbjct: 800 SNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKG 859
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQ+D+ GIIITGHSE MN QLPIE
Sbjct: 860 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIE 919
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 920 SQFVSKLADQLNAEIVL 936
Score = 35.8 bits (81), Expect(2) = 2e-98
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQ+LT ++ + E + + T
Sbjct: 583 NLSNRLQDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 642
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 643 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 675
Score = 249 bits (636), Expect = 1e-62
Identities = 195/733 (26%), Positives = 344/733 (46%), Gaps = 16/733 (2%)
Frame = +2
Query: 3647 PEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKGLN-- 3820
P F+ + Q N +Q++V+ DNVL+ APTG+GKT A +L+ N
Sbjct: 502 PAFKGMTQ----LNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPD 557
Query: 3821 -----GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQVVI 3985
++VY+AP++AL E + T ++ ++ Q+++
Sbjct: 558 GSYNHNDYKIVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQI-DETQIIV 616
Query: 3986 STPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSENK 4165
+TPEKWD ++R R + Q V L IID V+R V ++
Sbjct: 617 TTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVART--VRQIETTKEH 674
Query: 4166 IRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAMT 4342
IR+V LS +L N +D+ ++ GLF+F RPV L G+ + R Q M
Sbjct: 675 IRLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMN 734
Query: 4343 RPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLK---SEEELE 4513
Y ++ A + L+FV +R+ + TA + A+ FL + S E L
Sbjct: 735 DLCYEKVMSFAGKHQ-VLIFVHSRKETSKTARAIRDAALAND-TLSRFLKEDSASREILH 792
Query: 4514 PFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPA 4693
VK L L +G H G+T VD ++V LF G IQV V+++++ WG+ LPA
Sbjct: 793 THTDLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPA 852
Query: 4694 HLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFL 4873
H V++ GTQ Y+ + T+ D++QM+G A RP D+ G +I+ + +YY +
Sbjct: 853 HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLM 912
Query: 4874 YEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSH 5053
+ LP+ES L D LNAE+V G + N +EA +++ +T++Y R+ +NP Y L +
Sbjct: 913 NQQLPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAP 972
Query: 5054 RH---LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVGS*YCISYTTMERFNS 5221
L + ++L+ + + L+ + + + +LG + S Y I++ T+ +N
Sbjct: 973 TRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNE 1032
Query: 5222 SLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANAL 5401
L L + + + E+ + R E+ + +L+ + +P K N L
Sbjct: 1033 HLKPMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVL 1091
Query: 5402 LHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGI 5578
L A+ S+ + G +L SD I SA RL++A+ +++ GW LA + + +MV++ +
Sbjct: 1092 LQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRM 1151
Query: 5579 FERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARF 5758
+ + L Q + ++ + E + E +DL+ + EL++ + + +F
Sbjct: 1152 WSVQTPLRQFHGISNDILMKL-EKKDLAWERYYDLSSQE---LGELIRAPKMG-RTLHKF 1206
Query: 5759 CERFPNIDMTYEV 5797
+FP +++ V
Sbjct: 1207 IHQFPKLNLAAHV 1219
Score = 80.5 bits (197), Expect(2) = 4e-16
Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 25/129 (19%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*------------------- 555
Q+ ND+CYEKVM+ AG+ QV IFVHSRKE KT R
Sbjct: 731 QLMNDLCYEKVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREI 790
Query: 556 -----DFTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATL 720
D NE + L+ A+H GM R R LVE+L +GH++VL+ TATL
Sbjct: 791 LHTHTDLVKSNEL------KDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATL 844
Query: 721 AWDINLPAH 747
AW +NLPAH
Sbjct: 845 AWGVNLPAH 853
Score = 35.0 bits (79), Expect(2) = 4e-16
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+H +IIKGT+IY QMLGR GRPQ D+ G
Sbjct: 852 AHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEG 894
Score = 62.0 bits (149), Expect(2) = 9e-15
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ D+ IIITGHSEL YYL MN QLP+ SQFV K R
Sbjct: 886 GRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREA 945
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
L YL+V M RNPT +GL
Sbjct: 946 SNWLGYT--YLYVRMLRNPTLYGL 967
Score = 48.9 bits (115), Expect(2) = 9e-15
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + E KDLL YG IH GM R D LV +L +GHIQVLV TATL +
Sbjct: 792 HTHTDLVKSN--ELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAW 846
Score = 84.0 bits (206), Expect = 9e-13
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALAN--DTLSRFLKED 1922
R Q M Y +V A+ GK ++FV +RK TA I + A+ + L L+
Sbjct: 1568 RMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPFLLR-- 1624
Query: 1923 SVSREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATL 2102
S E ++ + LK +L +G + G++ D+E+V LF G +QV V ++++
Sbjct: 1625 --SLEDIEPFVDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSM 1682
Query: 2103 AWGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSE 2282
WGV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1683 CWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPR 1742
Query: 2283 XXXXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D +
Sbjct: 1743 KEYYKKFLYEAFPVESHLHHFLHDNI 1768
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 1980 bits (5129), Expect = 0.0
Identities = 969/1262 (76%), Positives = 1097/1262 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EA NWL YTYLY+RMLRNPTLYGL ADA +RD TLEERRADL
Sbjct: 931 NAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAPTRDITLEERRADL----- 985
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 986 -----------IHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1034
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KP MGDIELCR+F LS+EFKYVTVRQDEKMELAKLL VPIP+KESLEEPSAKINVLLQA
Sbjct: 1035 KPMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKESLEEPSAKINVLLQA 1094
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRLM+A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1095 YISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRMWSV 1154
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGI DIL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKLN
Sbjct: 1155 QTPLRQFHGISNDILMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLN 1214
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVE FWV+VEDNDGEFI HHE+F+LKKQY
Sbjct: 1215 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVESFWVLVEDNDGEFIHHHEHFLLKKQY 1274
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPI EPLPPQYF+RVVSD+WL SQ++LPVSFRHLILPEK+P P ELLDLQ
Sbjct: 1275 IDEDHTLNFTVPICEPLPPQYFIRVVSDRWLGSQTILPVSFRHLILPEKFPPPMELLDLQ 1334
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYNTDDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1335 PLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILR 1394
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
N+QKG + ++R VYIAP+E+LAKERY DW ATDLKLLE+GQ+
Sbjct: 1395 NYQKGQDNVLRAVYIAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQI 1454
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK+VQQVSLFIID VSRMRY+AS E
Sbjct: 1455 IISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QIE 1512
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKD+G+WIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1513 NKIRIVALSTSLANAKDIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+NGKPA++FVPTR+ RLTA D +TYS+AD+GE+ FLL+S E++EPF
Sbjct: 1573 TKPTYTAIVQHAKNGKPAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPFLLRSLEDIEPF 1632
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ + ML A LRHG+GYLHEGL+S+D E+V+ LF+AGWIQVCV SSSMCWG+ L AHL
Sbjct: 1633 VDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHL 1692
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DL+QMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1693 VVVMGTQYYDGRENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1752
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDN+NAE+V G+I NKQ+AVDYITWT MYRRL+QNPNYYNLQGVSHRH
Sbjct: 1753 AFPVESHLHHFLHDNINAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQGVSHRH 1812
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVE+T+SDLEASKC+S+E+ +DLSP NLGM+ S Y ISYTT+ERF+SSLT+KT
Sbjct: 1813 LSDHLSELVEHTLSDLEASKCISIEDDMDLSPSNLGMIASYYYISYTTIERFSSSLTAKT 1872
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASEYA LP RPGEEELIRRLINHQR+SFENP+CTDPHVKANALL A+FS
Sbjct: 1873 KMKGLLEILASASEYALLPIRPGEEELIRRLINHQRFSFENPKCTDPHVKANALLQAYFS 1932
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R +V GNL DQRE+++SASRLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1933 RQSVGGNLALDQREVVISASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGLWERDSML 1992
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAKRCQEN GK+IET+FDL EM+D++R ELLQMSD QLLDIARFC RFPNI
Sbjct: 1993 LQLPHFTKELAKRCQENSGKNIETIFDLVEMEDNERHELLQMSDSQLLDIARFCNRFPNI 2052
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
DM YEVL+ TLERDL +EVGPVDA RYPK KEEGWWLVVGD+K+N
Sbjct: 2053 DMAYEVLDGENVAAGENVTLQVTLERDLDGRTEVGPVDALRYPKAKEEGWWLVVGDTKSN 2112
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQRK+KVKL+F AP++ G+KSYTLYFMCDSYLGCDQEYSFT+DVK+A
Sbjct: 2113 QLLAIKRVSLQRKAKVKLDFTAPADTGKKSYTLYFMCDSYLGCDQEYSFTVDVKDAAAFD 2172
Query: 6140 DD 6145
+D
Sbjct: 2173 ED 2174
Score = 355 bits (910), Expect(2) = 2e-98
Identities = 187/257 (72%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHLL---KYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 680 LSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMNDLCYE 739
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV++ AGKHQVLIFVHSRKET KTARAIRDAALANDTLSRFLKEDS SREIL T + V+
Sbjct: 740 KVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREILHTHTDLVK 799
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SN+LKDLLPYGFAIH+AGM R DR+LVE LF G +QVLV TATLAWGVNL AH VIIKG
Sbjct: 800 SNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKG 859
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQ+D+ GIIITGHSE MN QLPIE
Sbjct: 860 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIE 919
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 920 SQFVSKLADQLNAEIVL 936
Score = 35.8 bits (81), Expect(2) = 2e-98
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQ+LT ++ + E + + T
Sbjct: 583 NLSNRLQDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 642
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 643 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 675
Score = 249 bits (636), Expect = 1e-62
Identities = 195/733 (26%), Positives = 344/733 (46%), Gaps = 16/733 (2%)
Frame = +2
Query: 3647 PEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKGLN-- 3820
P F+ + Q N +Q++V+ DNVL+ APTG+GKT A +L+ N
Sbjct: 502 PAFKGMTQ----LNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPD 557
Query: 3821 -----GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQVVI 3985
++VY+AP++AL E + T ++ ++ Q+++
Sbjct: 558 GSYNHNDYKIVYVAPMKALVAEVVGNLSNRLQDYGVKVRELSGDQTLTRQQI-DETQIIV 616
Query: 3986 STPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSENK 4165
+TPEKWD ++R R + Q V L IID V+R V ++
Sbjct: 617 TTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVART--VRQIETTKEH 674
Query: 4166 IRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAMT 4342
IR+V LS +L N +D+ ++ GLF+F RPV L G+ + R Q M
Sbjct: 675 IRLVGLSATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMN 734
Query: 4343 RPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLK---SEEELE 4513
Y ++ A + L+FV +R+ + TA + A+ FL + S E L
Sbjct: 735 DLCYEKVMSFAGKHQ-VLIFVHSRKETSKTARAIRDAALAND-TLSRFLKEDSASREILH 792
Query: 4514 PFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPA 4693
VK L L +G H G+T VD ++V LF G IQV V+++++ WG+ LPA
Sbjct: 793 THTDLVKSNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPA 852
Query: 4694 HLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFL 4873
H V++ GTQ Y+ + T+ D++QM+G A RP D+ G +I+ + +YY +
Sbjct: 853 HCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLM 912
Query: 4874 YEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSH 5053
+ LP+ES L D LNAE+V G + N +EA +++ +T++Y R+ +NP Y L +
Sbjct: 913 NQQLPIESQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGLAADAP 972
Query: 5054 RH---LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVGS*YCISYTTMERFNS 5221
L + ++L+ + + L+ + + + +LG + S Y I++ T+ +N
Sbjct: 973 TRDITLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNE 1032
Query: 5222 SLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANAL 5401
L L + + + E+ + R E+ + +L+ + +P K N L
Sbjct: 1033 HLKPMMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLERVPIPIKE-SLEEPSAKINVL 1091
Query: 5402 LHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGI 5578
L A+ S+ + G +L SD I SA RL++A+ +++ GW LA + + +MV++ +
Sbjct: 1092 LQAYISQLKLEGLSLTSDMVFITQSAGRLMRALFEIVLKRGWAQLAEKALNLCKMVSKRM 1151
Query: 5579 FERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARF 5758
+ + L Q + ++ + E + E +DL+ + EL++ + + +F
Sbjct: 1152 WSVQTPLRQFHGISNDILMKL-EKKDLAWERYYDLSSQE---LGELIRAPKMG-RTLHKF 1206
Query: 5759 CERFPNIDMTYEV 5797
+FP +++ V
Sbjct: 1207 IHQFPKLNLAAHV 1219
Score = 80.5 bits (197), Expect(2) = 4e-16
Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 25/129 (19%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*------------------- 555
Q+ ND+CYEKVM+ AG+ QV IFVHSRKE KT R
Sbjct: 731 QLMNDLCYEKVMSFAGKHQVLIFVHSRKETSKTARAIRDAALANDTLSRFLKEDSASREI 790
Query: 556 -----DFTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATL 720
D NE + L+ A+H GM R R LVE+L +GH++VL+ TATL
Sbjct: 791 LHTHTDLVKSNEL------KDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATL 844
Query: 721 AWDINLPAH 747
AW +NLPAH
Sbjct: 845 AWGVNLPAH 853
Score = 35.0 bits (79), Expect(2) = 4e-16
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+H +IIKGT+IY QMLGR GRPQ D+ G
Sbjct: 852 AHCVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEG 894
Score = 62.0 bits (149), Expect(2) = 9e-15
Identities = 39/84 (46%), Positives = 43/84 (51%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ D+ IIITGHSEL YYL MN QLP+ SQFV K R
Sbjct: 886 GRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREA 945
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
L YL+V M RNPT +GL
Sbjct: 946 SNWLGYT--YLYVRMLRNPTLYGL 967
Score = 48.9 bits (115), Expect(2) = 9e-15
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + E KDLL YG IH GM R D LV +L +GHIQVLV TATL +
Sbjct: 792 HTHTDLVKSN--ELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAW 846
Score = 84.0 bits (206), Expect = 9e-13
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALAN--DTLSRFLKED 1922
R Q M Y +V A+ GK ++FV +RK TA I + A+ + L L+
Sbjct: 1568 RMQAMTKPTYTAIVQHAKNGK-PAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPFLLR-- 1624
Query: 1923 SVSREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATL 2102
S E ++ + LK +L +G + G++ D+E+V LF G +QV V ++++
Sbjct: 1625 --SLEDIEPFVDKINDEMLKAILRHGVGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSM 1682
Query: 2103 AWGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSE 2282
WGV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1683 CWGVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPR 1742
Query: 2283 XXXXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D +
Sbjct: 1743 KEYYKKFLYEAFPVESHLHHFLHDNI 1768
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 1980 bits (5129), Expect = 0.0
Identities = 967/1265 (76%), Positives = 1100/1265 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EACNW+ YTYLY+RMLRNP+LYG+ D L+RD TLEERRADL
Sbjct: 938 NAEIVLGTVQNAREACNWIGYTYLYVRMLRNPSLYGIAPDVLTRDITLEERRADL----- 992
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L++NNLVKY++KSG FQVTDLGRIAS+YYI+HG+ISTY+EHL
Sbjct: 993 -----------IHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGSISTYNEHL 1041
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1101
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+ K+MW+V
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMGTKRMWSV 1161
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GIP D+L+K+EK+++AWE YYDLSSQEI +L PK+G+ LHK+IHQFPKLN
Sbjct: 1162 QTPLRQFNGIPSDLLTKLEKKDLAWERYYDLSSQEIGELIRAPKMGRTLHKFIHQFPKLN 1221
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF W+DR+HGYVEPFWVIVEDNDGE+ILHHEYFMLKKQY
Sbjct: 1222 LAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFMLKKQY 1281
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSD+WL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1282 IDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1341
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRN +E+LY++F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1342 PLPVTALRNSSYESLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1401
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + +MRVVY+APVEALAKERY DW ATDLKLLEKGQ+
Sbjct: 1402 NHQKGPDSVMRVVYVAPVEALAKERYRDWERKFGGGLKLRVVELTGETATDLKLLEKGQI 1461
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1462 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVVVSRMRYIAS--QVE 1519
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NK RIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQG+DI NFEAR QAM
Sbjct: 1520 NKSRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGIDITNFEARMQAM 1579
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+NGKPAL+FVPTR+ RLTA D +TYS ADSGE+P FLL+S EELEPF
Sbjct: 1580 TKPTYTAIVQHAKNGKPALIFVPTRKHVRLTAVDMITYSGADSGEKP-FLLRSAEELEPF 1638
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ K+ + ML TLR G+GYLHEGL S+D +IV+ LF+AGWIQVCV +SSMCWG+ L AHL
Sbjct: 1639 LDKITDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCWGVTLLAHL 1698
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN TDYPV DLLQMMGHA+RPL+DNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1699 VVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYE 1758
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL H+LHDNLNAE+V G+I NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1759 AFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1818
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSE+VENT+SDLEA KC+++E+ ++L+PLNLGM+ S Y ISYTT+ERF+SS+TSKT
Sbjct: 1819 LSDHLSEMVENTLSDLEAGKCITIEDDMELAPLNLGMIASYYYISYTTIERFSSSVTSKT 1878
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEIL+SASEYA+LP RPGEEE++R+LINHQR+SFENP+ TDPHVKANALL AHFS
Sbjct: 1879 KMKGLLEILSSASEYAQLPIRPGEEEVVRKLINHQRFSFENPKVTDPHVKANALLQAHFS 1938
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL DQ+E+L+SA+RLLQAMVDVISSNGWL LALL MEVSQMVTQG++ERDSML
Sbjct: 1939 RQFVGGNLALDQKEVLLSANRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGMWERDSML 1998
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAK+CQENPGKSIETVFDL EM+D++RQ+LL MSDLQLLDIARFC RFPNI
Sbjct: 1999 LQLPHFTKDLAKKCQENPGKSIETVFDLLEMEDEERQKLLGMSDLQLLDIARFCNRFPNI 2058
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D++YEVL+ TLERD +EVGPVDAPRYPK KEEGWWL+VGD+KTN
Sbjct: 2059 DLSYEVLDSDNVRAGEVVTVLVTLERDFEGRTEVGPVDAPRYPKAKEEGWWLIVGDTKTN 2118
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
LLAIKRVSLQRK K KLEF AP++AGRKSY+LYFMCDSYLGCDQEY FT+DV G
Sbjct: 2119 LLLAIKRVSLQRKLKAKLEFDAPADAGRKSYSLYFMCDSYLGCDQEYGFTVDVNADG-GD 2177
Query: 6140 DDSGR 6154
+DSGR
Sbjct: 2178 EDSGR 2182
Score = 364 bits (934), Expect(2) = e-101
Identities = 192/257 (74%), Positives = 209/257 (81%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +Y+GIT KKPLQRFQLMNDICYE
Sbjct: 687 LSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYE 746
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRDAALANDTL RFLKEDS SREIL T + V+
Sbjct: 747 KVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREILHTHTDLVK 806
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM RTDR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 807 SNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 866
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGII+TGHSE MN QLPIE
Sbjct: 867 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIE 926
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 927 SQFVSKLADQLNAEIVL 943
Score = 34.7 bits (78), Expect(2) = e-101
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R ++Y +KV EL GDQSLT ++ + E + + T
Sbjct: 590 NLSNRLQEYDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 649
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K++I
Sbjct: 650 IDEIHLLHDNR--GPVLESIVARTVRQIETTKDYI 682
Score = 250 bits (638), Expect = 7e-63
Identities = 200/748 (26%), Positives = 350/748 (46%), Gaps = 16/748 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
+L+ + +P A P F+ + Q N +Q++V+ DN+L+ APTG+GKT A
Sbjct: 495 KLVKISSMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKTNVA 548
Query: 3782 EFAVL------RNHQKGL--NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
+L RN + G + ++VY+AP++AL E +
Sbjct: 549 VLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQEYDVKVRELSGD 608
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 609 QSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESI 667
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
V+R V +++ IR+V LS +L N +D+ ++ GLF F RPVPL
Sbjct: 668 VART--VRQIETTKDYIRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQQY 725
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADS 4468
G+ + R Q M Y ++ A + L+FV +R+ + TA +N
Sbjct: 726 VGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRDAALANDTL 784
Query: 4469 GERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQV 4648
G S E L VK L L +G H G+T D ++V LF G +QV
Sbjct: 785 GRFLKEDSASREILHTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQV 844
Query: 4649 CVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCM 4828
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+ +
Sbjct: 845 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGI 904
Query: 4829 ILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRR 5008
I+ + +YY + + LP+ES L D LNAE+V G + N +EA ++I +T++Y R
Sbjct: 905 IVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYLYVR 964
Query: 5009 LSQNPNYYNL-QGVSHRH--LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVG 5176
+ +NP+ Y + V R L + ++L+ + L+ + + + +LG +
Sbjct: 965 MLRNPSLYGIAPDVLTRDITLEERRADLIHTAATILDRNNLVKYDRKSGYFQVTDLGRIA 1024
Query: 5177 S*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSF 5356
S Y I++ ++ +N L L + + + E+ + R E+ + +L++
Sbjct: 1025 SYYYITHGSISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI 1084
Query: 5357 ENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
+ +P K N LL A+ S+ + G +L SD I SA RLL+A+ +++ GW L
Sbjct: 1085 KE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQL 1143
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
A + + +M T+ ++ + L Q +L + E + E +DL+ + +
Sbjct: 1144 AEKALNLCKMGTKRMWSVQTPLRQFNGIPSDLLTKL-EKKDLAWERYYDLSSQEIGELIR 1202
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+M + +F +FP +++ V
Sbjct: 1203 APKMG----RTLHKFIHQFPKLNLAAHV 1226
Score = 87.8 bits (216), Expect(2) = 4e-19
Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ NDICYEKVMA AG+ QV IFVHSRKE KT R G D
Sbjct: 738 QLMNDICYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDAALANDTLGRFLKEDSASREI 797
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H GM RT R LVE+L +GHV+VL+ TATLAW
Sbjct: 798 LHTHTDLVKS---NDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAWG 854
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 855 VNLPAHTV 862
Score = 37.7 bits (86), Expect(2) = 4e-19
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 859 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901
Score = 62.4 bits (150), Expect(2) = 5e-15
Identities = 39/84 (46%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E II+TGHSEL YYL MN QLP+ SQFV K LA R
Sbjct: 893 GRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 951
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNP+ +G+
Sbjct: 952 ACNWIGYT-YLYVRMLRNPSLYGI 974
Score = 49.3 bits (116), Expect(2) = 5e-15
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + + KDLL YG IH GM RTD LV +L +GH+QVLV TATL +
Sbjct: 799 HTHTDLVKSN--DLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHVQVLVSTATLAW 853
Score = 84.3 bits (207), Expect = 7e-13
Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y +V A+ GK LIFV +RK TA + + A+ FL
Sbjct: 1575 RMQAMTKPTYTAIVQHAKNGK-PALIFVPTRKHVRLTAVDMITYSGADSGEKPFLLR--- 1630
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + LK L G + G+ D ++V LF G +QV V +++ W
Sbjct: 1631 SAEELEPFLDKITDEMLKVTLREGVGYLHEGLNSLDHDIVTQLFEAGWIQVCVLNSSMCW 1690
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV LLAH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1691 GVTLLAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKE 1750
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1751 YYKKFLYEAFPVESHLHHFLHDNL 1774
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 1979 bits (5127), Expect = 0.0
Identities = 974/1278 (76%), Positives = 1103/1278 (86%), Gaps = 22/1278 (1%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+AKEAC+W+ YTYLY+RMLRNP+LYGL D LSRD TLEERRADL I+
Sbjct: 946 NAEIVLGTVQNAKEACHWIGYTYLYVRMLRNPSLYGLAPDVLSRDITLEERRADLF-IEL 1004
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
L S +IH AAT+L++NNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 1005 LEKGTKSLWTIIHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1064
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1065 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1124
Query: 2900 HISQLKLEGLSLTSDMVFITQ----------------------SAGRLMQAVFEIAL*RG 3013
+ISQLKLEGLS+TSDMVFITQ SAGRL++A+FEI L RG
Sbjct: 1125 YISQLKLEGLSMTSDMVFITQFIRSGVPLILLFADSCIMFLFQSAGRLLRALFEIVLKRG 1184
Query: 3014 WAQVAEKALNLCKLVGKQMWNVQTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEK 3193
WAQ+AEKALNLCK+V K+MW+VQTPLRQF+GIP D+L+K+EK+++AWE YYDLSSQEI +
Sbjct: 1185 WAQLAEKALNLCKMVTKRMWSVQTPLRQFNGIPSDVLTKLEKKDLAWERYYDLSSQEIGE 1244
Query: 3194 LTGQPKLGKLLHKYIHQFPKLNLAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWV 3373
L PK+G+ LH++IHQFPKLNLAAH+QPITRTVL VELTITPDF W+DR+HGYVEPFWV
Sbjct: 1245 LIRAPKMGRTLHRFIHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFWV 1304
Query: 3374 IVEDNDGEFILHHEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLP 3553
IVEDNDGE+ILHHEYF+LKKQYI+EDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLP
Sbjct: 1305 IVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLP 1364
Query: 3554 VSFRHLILPEKYPLPTELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDD 3733
VSFRHLILPEKYP PTELLDLQPLPVTALRNP +EALYQ+F HFNP+QTQVF LYN+DD
Sbjct: 1365 VSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVFTVLYNSDD 1424
Query: 3734 NVLVAAPTGSGKTICAEFAVLRNHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXX 3913
NVLVAAPTGSGKTICAEFA+LRNHQK + +MRVVYIAPVEALAKERY DW
Sbjct: 1425 NVLVAAPTGSGKTICAEFAILRNHQKLPDSVMRVVYIAPVEALAKERYRDWEKKFGGGLK 1484
Query: 3914 XXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXX 4093
ATDLKLLEKGQV+ISTPEKWD+LSR WK RKHVQQVSLFIID
Sbjct: 1485 LKVVELTGETATDLKLLEKGQVIISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQ 1544
Query: 4094 XXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRP 4273
VSRMRY++S ENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRP
Sbjct: 1545 GGPVLEVIVSRMRYISS--QLENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRP 1602
Query: 4274 VPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTY 4453
VPLEIHIQGVDIANFEAR QAMT+PTYT+I QHA+N KPA++FVPTR+ RLTA D +TY
Sbjct: 1603 VPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAKNKKPAIVFVPTRKHVRLTAVDLITY 1662
Query: 4454 SNADSGERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDA 4633
S ADSGE+P FLL+S EELEPFI+K+ + ML TLR G+GYLHEGL S+D +IV+ LF+A
Sbjct: 1663 SGADSGEKP-FLLRSLEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHDIVAQLFEA 1721
Query: 4634 GWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDN 4813
GWIQVCV SSSMCWG+ L AHLVVVMGTQYYDGREN TDYPV DLLQMMGHA+RPL+DN
Sbjct: 1722 GWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDN 1781
Query: 4814 SGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWT 4993
SGKC+ILCHAP+KEYY+KFLYEA PVESHL H+LHDNLNAE+V G+I NKQ+AVDY+TWT
Sbjct: 1782 SGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNLNAEIVAGIIENKQDAVDYLTWT 1841
Query: 4994 FMYRRLSQNPNYYNLQGVSHRHLSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMV 5173
FMYRRL+QNPNYYNLQGVSHRHLSDHLSE+VENT+SDLEASKC+S+E+ +DLSPLNLGM+
Sbjct: 1842 FMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDLEASKCVSIEDDMDLSPLNLGMI 1901
Query: 5174 GS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYS 5353
S Y ISYTT+ERF+SSLTSKTK+KGLLE+L+SASEYA LP RPGEEE++RRLINHQR+S
Sbjct: 1902 ASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEYAHLPIRPGEEEVVRRLINHQRFS 1961
Query: 5354 FENPRCTDPHVKANALLHAHFSRHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
FENP+ TDPHVKANALL AHFSR +V GNL DQRE+L+SA+RLLQAMVDVISSNGWL +
Sbjct: 1962 FENPKVTDPHVKANALLQAHFSRQSVGGNLSLDQREVLLSANRLLQAMVDVISSNGWLSM 2021
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
ALL MEVSQMVTQG++ERDSMLLQLPHFTK+LAK+CQENPG+SIETVFDL EM+DD+R+E
Sbjct: 2022 ALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKKCQENPGRSIETVFDLLEMEDDERRE 2081
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVD 5893
LL M+D QLLDIARFC RFPNID++YE+L+ TLERDL +EVGPVD
Sbjct: 2082 LLNMTDSQLLDIARFCNRFPNIDLSYEILDNDNVRAGDDITLQVTLERDLEGKTEVGPVD 2141
Query: 5894 APRYPKCKEEGWWLVVGDSKTNQLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCD 6073
APRYPK KEEGWWLVVGD+KTN LLAIKRVSLQRK K KLEF AP++AG+KSY LYFMCD
Sbjct: 2142 APRYPKAKEEGWWLVVGDTKTNMLLAIKRVSLQRKLKAKLEFAAPADAGKKSYVLYFMCD 2201
Query: 6074 SYLGCDQEYSFTIDVKEA 6127
SY+GCDQEY FT+DVKEA
Sbjct: 2202 SYMGCDQEYGFTLDVKEA 2219
Score = 354 bits (909), Expect(2) = 5e-97
Identities = 187/257 (72%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + + +YIGIT KKPLQRFQLMNDICY
Sbjct: 695 LSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQYIGITIKKPLQRFQLMNDICYR 754
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+ AGKHQVLIFVHSRKET KTARAIRDAALA+DTL RFLKEDS SREIL T + V+
Sbjct: 755 KVLDVAGKHQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSASREILHTHTDLVK 814
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
S+DLKDLLPYGFAIH+AGM RTDR+LVE LF G QVLV TATLAWGVNL AHTVIIKG
Sbjct: 815 SSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKG 874
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYD+ EGII+TGHSE MN QLPIE
Sbjct: 875 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIE 934
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 935 SQFISKLADQLNAEIVL 951
Score = 31.6 bits (70), Expect(2) = 5e-97
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y++ V EL GDQSLT ++ + E + + T
Sbjct: 598 NLSNRLQDYNVTVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVI 657
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K++I
Sbjct: 658 IDEIHLLHDNR--GPVLESIVARTVRQIETSKDYI 690
Score = 237 bits (604), Expect = 6e-59
Identities = 212/787 (26%), Positives = 352/787 (44%), Gaps = 55/787 (6%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICA 3781
+LL + +P A P F+ + Q N +Q++V+ DN+L+ APTG+GKT A
Sbjct: 503 KLLKISAMPDWA--QPAFKGMTQ----LNRVQSKVYETALFKPDNLLLCAPTGAGKTNVA 556
Query: 3782 EFAVL------RNHQKGL--NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
+L RN G + ++VY+AP++AL E +
Sbjct: 557 VLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQDYNVTVRELSGD 616
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 617 QSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVLESI 675
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
V+R V S++ IR+V LS +L N +D+ ++ + GLF F RPVPL
Sbjct: 676 VART--VRQIETSKDYIRLVGLSATLPNYEDVALFLRVDLNKGLFYFDNSYRPVPLSQQY 733
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGE 4474
G+ I R Q M Y ++ A + L+FV +R+ + TA + AD
Sbjct: 734 IGITIKKPLQRFQLMNDICYRKVLDVAGKHQ-VLIFVHSRKETAKTARAIRDAALADD-T 791
Query: 4475 RPLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQ 4645
FL + S E L VK L L +G H G+T D ++V LF G Q
Sbjct: 792 LGRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQ 851
Query: 4646 VCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKC 4825
V V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+
Sbjct: 852 VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEG 911
Query: 4826 MILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYR 5005
+IL + +YY + + LP+ES L D LNAE+V G + N +EA +I +T++Y
Sbjct: 912 IILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACHWIGYTYLYV 971
Query: 5006 RLSQNPNYYNL-QGVSHRHL------SDHLSELVEN-------------TISDLEASKCL 5125
R+ +NP+ Y L V R + +D EL+E TI D
Sbjct: 972 RMLRNPSLYGLAPDVLSRDITLEERRADLFIELLEKGTKSLWTIIHTAATILDRNNLVKY 1031
Query: 5126 SVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRP 5305
+ G +LG + S Y I++ T+ +N L L + + + E+ + R
Sbjct: 1032 DRKSGY-FQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQ 1090
Query: 5306 GEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQ--------- 5455
E+ + +L++ + +P K N LL A+ S+ + G ++ SD
Sbjct: 1091 DEKMELAKLLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSMTSDMVFITQFIRS 1149
Query: 5456 -------------REILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSM 5596
+ SA RLL+A+ +++ GW LA + + +MVT+ ++ +
Sbjct: 1150 GVPLILLFADSCIMFLFQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVTKRMWSVQTP 1209
Query: 5597 LLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPN 5776
L Q ++ + E + E +DL+ + + +M + RF +FP
Sbjct: 1210 LRQFNGIPSDVLTKL-EKKDLAWERYYDLSSQEIGELIRAPKMG----RTLHRFIHQFPK 1264
Query: 5777 IDMTYEV 5797
+++ V
Sbjct: 1265 LNLAAHV 1271
Score = 80.5 bits (197), Expect(2) = 6e-17
Identities = 57/125 (45%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*--CKP*DFT-------D*NES** 585
Q+ NDICY KV+ AG+ QV IFVHSRKE KT R D T D
Sbjct: 746 QLMNDICYRKVLDVAGKHQVLIFVHSRKETAKTARAIRDAALADDTLGRFLKEDSASREI 805
Query: 586 VH*SEGLVAVS---------LAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
+H LV S A+H GM RT R LVE+L +GH +VL+ TATLAW +NL
Sbjct: 806 LHTHTDLVKSSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNL 865
Query: 739 PAHTL 753
PAHT+
Sbjct: 866 PAHTV 870
Score = 37.7 bits (86), Expect(2) = 6e-17
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 867 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 909
Score = 61.2 bits (147), Expect(2) = 3e-14
Identities = 38/84 (45%), Positives = 48/84 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E II+TGHSEL YYL MN QLP+ SQF+ K LA +
Sbjct: 901 GRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISK-LADQLNAEIVLGTVQNAKE 959
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL+V M RNP+ +GL
Sbjct: 960 ACHWIGYT-YLYVRMLRNPSLYGL 982
Score = 47.8 bits (112), Expect(2) = 3e-14
Identities = 29/57 (50%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 862 YTYWILVRHHGEESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
+T+ LV+ + KDLL YG IH GM RTD LV +L +GH QVLV TATL +
Sbjct: 807 HTHTDLVK--SSDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGHAQVLVSTATLAW 861
Score = 82.4 bits (202), Expect = 3e-12
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 1/203 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVS 1931
R Q M Y + A K ++FV +RK TA + + A+ FL S
Sbjct: 1620 RMQAMTKPTYTSIAQHAKNKKPAIVFVPTRKHVRLTAVDLITYSGADSGEKPFLLR---S 1676
Query: 1932 REILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWG 2111
E L+ + LK L G + G+ D ++V LF G +QV V ++++ WG
Sbjct: 1677 LEELEPFINKISDEMLKVTLREGVGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWG 1736
Query: 2112 VNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXX 2291
V L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D S + +I+
Sbjct: 1737 VTLSAHLVVVMGTQYYDGRENAQTDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEY 1796
Query: 2292 XXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1797 YKKFLYEAFPVESHLHHFLHDNL 1819
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 1976 bits (5118), Expect = 0.0
Identities = 971/1263 (76%), Positives = 1099/1263 (87%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTV +AKEAC WL YTYLY+RM+RNPTLYGLPADAL D LEERRADL
Sbjct: 931 NAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTDYALEERRADL----- 985
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
+H AA +L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 986 -----------VHSAAILLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1034
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1035 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1094
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+IS+LKLEGLSL+SDMV+ITQSA RLM+A+FEI L RGWAQ+AEKAL CK++ K+MW+V
Sbjct: 1095 YISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSV 1154
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP +IL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKLN
Sbjct: 1155 QTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQELGELIRFPKMGRTLHKFIHQFPKLN 1214
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITR+VLRVELTITPDF WED+VHGYVEPFW+IVEDNDGEFILHHEYFMLKKQY
Sbjct: 1215 LAAHVQPITRSVLRVELTITPDFQWEDKVHGYVEPFWIIVEDNDGEFILHHEYFMLKKQY 1274
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1275 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1334
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1335 PLPVTALRNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1394
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + +R VYIAP+EALAKER++DW A+DLKLLEKGQ+
Sbjct: 1395 NHQKGPDSTIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQL 1454
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY++S E
Sbjct: 1455 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISS--QVE 1512
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1513 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHAR GKPAL++VPTR+ +RLTA D +TYS+ DS + P+FLL+S EELEPF
Sbjct: 1573 TKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLLRSAEELEPF 1632
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ ++ EPML TL++G+GYLHEGL++ D +IV LF+ GWIQVCV + +MCWG+ L AHL
Sbjct: 1633 VERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHL 1692
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPL+D+SGKC+ILCHAP+K+YY+KFLYE
Sbjct: 1693 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYE 1752
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHLQHYLHDNLNAEVV GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1753 AFPVESHLQHYLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1812
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSD LSELVENTISDLEASKC+++E+ LSPLNLGM+ S Y ISYTT+ERF+SS+TSKT
Sbjct: 1813 LSDQLSELVENTISDLEASKCVTIEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKT 1872
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASE+ +LP RPGEEELIRRLINH R+SFENP+ TDPHVKANALL AHFS
Sbjct: 1873 KLKGLLEILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFS 1932
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL SDQ+E+L+SA+RLLQAMVDVISSNGWL LALLTMEVSQMVTQG++ERDSML
Sbjct: 1933 RQMVGGNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSML 1992
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAK+CQENPG+SIETVFDL EM+DD+R+ELLQMSDLQLLDIARFC RFPNI
Sbjct: 1993 LQLPHFTKELAKKCQENPGRSIETVFDLVEMEDDERRELLQMSDLQLLDIARFCNRFPNI 2052
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D+TY+VL+ TLERDL +EVGPV APRYPK KEEGWWLVVGD+K+N
Sbjct: 2053 DLTYDVLDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSN 2112
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRV+LQRKSKVKL+F AP+EAG ++YTLYFMCDSYLGCDQEY+FT+DVKEA A
Sbjct: 2113 QLLAIKRVTLQRKSKVKLDFAAPAEAGTRNYTLYFMCDSYLGCDQEYNFTLDVKEA-MAE 2171
Query: 6140 DDS 6148
DDS
Sbjct: 2172 DDS 2174
Score = 359 bits (921), Expect(2) = 7e-99
Identities = 186/257 (72%), Positives = 211/257 (82%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+A+F RV + + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 680 LSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYE 739
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV++ AGKHQVLIFVHSRKET KTARAIRD ALANDTL +FLKEDS++RE+LQ+++ V+
Sbjct: 740 KVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTRELLQSQTELVK 799
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM RTDR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 800 SNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 859
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYDT EGII+TGHSE MN QLPIE
Sbjct: 860 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIE 919
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 920 SQFISKLADQLNAEIVL 936
Score = 33.1 bits (74), Expect(2) = 7e-99
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ R + Y + V EL GDQ+LT ++ + E + + T
Sbjct: 583 NLSKRLEHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 642
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SI+ARTIR +ET KEHI
Sbjct: 643 IDEIHLLHDNR--GPVLESIIARTIRQIETTKEHI 675
Score = 251 bits (642), Expect = 2e-63
Identities = 197/748 (26%), Positives = 352/748 (47%), Gaps = 16/748 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKT--- 3772
EL+ + +P A P F + Q N +Q++V+ + +N+L+ APTG+GKT
Sbjct: 488 ELVKISSIPEWA--RPAFSGMTQ----LNRVQSKVYETALFSPENILLCAPTGAGKTNVA 541
Query: 3773 ---ICAEFAVLRNHQKGL--NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
I + A+ RN G + ++VY+AP++AL E +
Sbjct: 542 MLTILQQIALNRNEDDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGD 601
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 602 QTLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESI 660
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
++R + ++ IR+V LS +L N +D+ ++ GLF+F RPVPL
Sbjct: 661 IART--IRQIETTKEHIRLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQY 718
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADS 4468
G+ + R Q M Y ++ A + L+FV +R+ + TA +N
Sbjct: 719 IGITVKKPLQRFQLMNDVCYEKVISIAGKHQ-VLIFVHSRKETSKTARAIRDTALANDTL 777
Query: 4469 GERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQV 4648
G+ + E L+ VK L L +G H G+ D ++V LF G +QV
Sbjct: 778 GKFLKEDSLTRELLQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQV 837
Query: 4649 CVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCM 4828
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +
Sbjct: 838 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGI 897
Query: 4829 ILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRR 5008
IL + +YY + + LP+ES L D LNAE+V G + N +EA ++ +T++Y R
Sbjct: 898 ILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVLNAKEACKWLLYTYLYVR 957
Query: 5009 LSQNPNYYNLQGVSHR---HLSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVG 5176
+ +NP Y L + + L + ++LV + L+ + + + +LG +
Sbjct: 958 MVRNPTLYGLPADALKTDYALEERRADLVHSAAILLDKNNLVKYDRKSGYFQVTDLGRIA 1017
Query: 5177 S*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSF 5356
S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1018 SYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI 1077
Query: 5357 ENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
+ +P K N LL A+ SR + G +L SD I SA+RL++A+ +++ GW L
Sbjct: 1078 KE-SLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQL 1136
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
A ++ +M+++ ++ + L Q E+ + E + E +DL+ + E
Sbjct: 1137 AEKALKWCKMISKRMWSVQTPLRQFHGIPNEILMKL-EKKDLAWERYYDLSSQE---LGE 1192
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEV 5797
L++ + + +F +FP +++ V
Sbjct: 1193 LIRFPKMG-RTLHKFIHQFPKLNLAAHV 1219
Score = 83.6 bits (205), Expect(2) = 3e-18
Identities = 55/125 (44%), Positives = 70/125 (56%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*-------------CKP*DFT--- 564
Q+ ND+CYEKV++ AG+ QV IFVHSRKE KT R K T
Sbjct: 731 QLMNDVCYEKVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTREL 790
Query: 565 --D*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
E + + L+ A+H GM RT R LVE+L +GHV+VL+ TATLAW +NL
Sbjct: 791 LQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 850
Query: 739 PAHTL 753
PAHT+
Sbjct: 851 PAHTV 855
Score = 39.3 bits (90), Expect(2) = 3e-18
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+DT G
Sbjct: 852 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYG 894
Score = 67.4 bits (163), Expect(2) = 2e-16
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+DT E II+TGHSEL YYL MN QLP+ SQF+ K LA +
Sbjct: 886 GRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISK-LADQLNAEIVLGTVLNAKE 944
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
++T YL+V M RNPT +GL
Sbjct: 945 ACKWLLYT-YLYVRMVRNPTLYGL 967
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GM RTD LV +L +GH+QVLV TATL +
Sbjct: 804 KDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAW 846
Score = 91.7 bits (226), Expect = 4e-15
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARAGKHQ-VLIFVHSRKETVKTARAIRD-AALANDTLSRFLKEDSV 1928
R Q M Y +V A K + L++V +RK TA + +++ ++ FL
Sbjct: 1568 RMQAMTKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLLR--- 1624
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + L++ L YG + G++ TD+++V+ LF G +QV V T+ W
Sbjct: 1625 SAEELEPFVERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCW 1684
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D+S + +I+
Sbjct: 1685 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKD 1744
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1745 YYKKFLYEAFPVESHLQHYLHDNL 1768
>ref|XP_007208410.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
gi|462404052|gb|EMJ09609.1| hypothetical protein
PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 1974 bits (5114), Expect = 0.0
Identities = 962/1264 (76%), Positives = 1096/1264 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC+WL YTYLYIRMLRNPTLYGL AD L RD TLEERRADL
Sbjct: 933 NAEIVLGTVQNAREACSWLGYTYLYIRMLRNPTLYGLEADVLKRDITLEERRADL----- 987
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+K+NL+KY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 988 -----------IHSAATILDKSNLIKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1036
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMEL KLL+ VPIPVKESLEEPSAKINVLLQA
Sbjct: 1037 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELVKLLDRVPIPVKESLEEPSAKINVLLQA 1096
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMV+ITQSAGRL++A+FEI L RGWAQ+AEKALNLCK+V K+MW+V
Sbjct: 1097 YISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVLKRGWAQLAEKALNLCKMVNKKMWSV 1156
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GI DIL K+EK+++AW+ YYDLSSQE+ +L P++G+ LHK+IHQFPKLN
Sbjct: 1157 QTPLRQFNGITNDILMKLEKKDLAWDRYYDLSSQELGELIRMPRMGRALHKFIHQFPKLN 1216
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVEPFWVIVEDNDGE++LHHEYF+LKKQY
Sbjct: 1217 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHEYFLLKKQY 1276
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSD+WL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1277 IDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1336
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFAVLR
Sbjct: 1337 PLPVTALRNPLYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAVLR 1396
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + +MRVVYIAP+EALAKERY DW ATD KLLEKGQ+
Sbjct: 1397 NHQKGSDSVMRVVYIAPIEALAKERYRDWEKKFGKGLKLRIELLTGETATDAKLLEKGQI 1456
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK VQQVSLFIID VSRMRY+AS LSE
Sbjct: 1457 IISTPEKWDALSRRWKQRKPVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIAS--LSE 1514
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGA+SHGLFNFPPGVRPVPLEIHIQGVD+ANFEAR QAM
Sbjct: 1515 NKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDLANFEARMQAM 1574
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
+PTYTAIVQHA+NGKPAL++VPTR+ RLTA D +TYS AD GE+ F+L+ E++EPF
Sbjct: 1575 AKPTYTAIVQHAKNGKPALVYVPTRKHVRLTAIDLMTYSTADGGEKSSFMLRPVEDIEPF 1634
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ ++ + +L TLR+G+GYLHEGLTS+D E+VS LF+AGWIQVCV SSSMCWG++L AHL
Sbjct: 1635 VERISDEILRGTLRNGVGYLHEGLTSLDQEVVSQLFEAGWIQVCVMSSSMCWGVSLSAHL 1694
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN+HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLYE
Sbjct: 1695 VVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYE 1754
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHL HYLHDNLNAEVV+G+I NKQ+AVDY+TWTF+YRRL+QNPNYYNLQGV+ RH
Sbjct: 1755 AFPVESHLHHYLHDNLNAEVVSGIIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTQRH 1814
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT++DLEASKC+++E+ +DLS LNLGM+ + Y +YTT+ERF+SSLTSKT
Sbjct: 1815 LSDHLSELVENTLTDLEASKCVAIEDDMDLSSLNLGMIAAYYYTNYTTIERFSSSLTSKT 1874
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEIL ASEY++LP RPGEEE++RRLINHQR+SFENP+CTDPHVKANALL AHF+
Sbjct: 1875 KMKGLLEILTHASEYSQLPIRPGEEEVLRRLINHQRFSFENPKCTDPHVKANALLQAHFA 1934
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R + GNL DQRE+++SASRLLQAMVDVISS+GWL LA+L MEVSQMVTQG++ERDSML
Sbjct: 1935 RQHLGGNLALDQREVIISASRLLQAMVDVISSSGWLSLAILAMEVSQMVTQGMWERDSML 1994
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAKRCQENPGKSIETVFDL EMDDD+R+ELLQMSD QLLDIA FC RFPNI
Sbjct: 1995 LQLPHFTKELAKRCQENPGKSIETVFDLFEMDDDERRELLQMSDKQLLDIALFCNRFPNI 2054
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D+T+EV TLERDL +EVG V+APRYPK KEEGWWLVVGD+KTN
Sbjct: 2055 DLTHEVQNSDNIRAGGEISLQVTLERDLEGRTEVGTVNAPRYPKAKEEGWWLVVGDTKTN 2114
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
LLAIKR S QR++KVKLEF AP+EAG K+Y LYFMCDSYLGCDQEY FT+DVK+A
Sbjct: 2115 SLLAIKRFSFQRRTKVKLEFAAPAEAGEKNYILYFMCDSYLGCDQEYEFTVDVKDAAGPD 2174
Query: 6140 DDSG 6151
+DSG
Sbjct: 2175 EDSG 2178
Score = 345 bits (886), Expect(2) = 2e-95
Identities = 183/257 (71%), Positives = 204/257 (79%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGI +KPLQRFQLMND+CYE
Sbjct: 682 LSATLPNYEDVALFLRVDLKRGLFYFDNSYRPVPLSQQYIGIMVRKPLQRFQLMNDLCYE 741
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+ AGKHQVLIFVHSRKET KTARAIRD ALA DTL RFLKEDS SREIL T + V+
Sbjct: 742 KVMDVAGKHQVLIFVHSRKETAKTARAIRDTALAKDTLGRFLKEDSASREILTTHTDLVK 801
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AG+ R DR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 802 SNDLKDLLPYGFAIHHAGLNRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 861
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIY+PEKGAWTELSPLDV QMLGRAGRPQ+D+ EGIIITGH+E MN QLPIE
Sbjct: 862 TQIYDPEKGAWTELSPLDVMQMLGRAGRPQFDSYGEGIIITGHNELQYYLSLMNQQLPIE 921
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 922 SQFVSKLADQLNAEIVL 938
Score = 35.0 bits (79), Expect(2) = 2e-95
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R K+Y + V EL GDQ+LT ++ + E + + T
Sbjct: 585 NLSNRLKEYGVTVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 644
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET K+HI
Sbjct: 645 IDEIHLLHDNR--GPVLESIVARTVRQIETTKDHI 677
Score = 256 bits (654), Expect = 1e-64
Identities = 205/758 (27%), Positives = 357/758 (47%), Gaps = 18/758 (2%)
Frame = +2
Query: 3578 PEKYPLPTELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPT 3757
P + L+ + +P A P F + Q N +Q++V+ DN+L+ APT
Sbjct: 482 PRPFDPDERLVKISDMPEWA--QPAFRGMNQ----LNRVQSRVYETALFRADNILLCAPT 535
Query: 3758 GSGKTICAEFAVLRN---HQKGLNGIM-----RVVYIAPVEALAKERYHDWXXXXXXXXX 3913
G+GKT A +L+ H +G + ++VY+AP++AL E +
Sbjct: 536 GAGKTNVAVLTILQQIALHMNKEDGSINHNDYKIVYVAPMKALVAEVVGNLSNRLKEYGV 595
Query: 3914 XXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXX 4093
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 596 TVRELSGDQTLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDN 654
Query: 4094 XXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVR 4270
V+R V +++ IR+V LS +L N +D+ ++ GLF F R
Sbjct: 655 RGPVLESIVART--VRQIETTKDHIRLVGLSATLPNYEDVALFLRVDLKRGLFYFDNSYR 712
Query: 4271 PVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVT 4450
PVPL G+ + R Q M Y ++ A + L+FV +R+ + TA
Sbjct: 713 PVPLSQQYIGIMVRKPLQRFQLMNDLCYEKVMDVAGKHQ-VLIFVHSRKETAKTARAIRD 771
Query: 4451 YSNA-DSGERPLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVS 4618
+ A D+ R FL + S E L VK L L +G H GL D ++V
Sbjct: 772 TALAKDTLGR--FLKEDSASREILTTHTDLVKSNDLKDLLPYGFAIHHAGLNRADRQLVE 829
Query: 4619 HLFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATR 4798
LF G +QV V+++++ WG+ LPAH V++ GTQ YD + T+ D++QM+G A R
Sbjct: 830 DLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGR 889
Query: 4799 PLLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVD 4978
P D+ G+ +I+ + +YY + + LP+ES L D LNAE+V G + N +EA
Sbjct: 890 PQFDSYGEGIIITGHNELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACS 949
Query: 4979 YITWTFMYRRLSQNPNYYNLQGVSHRH---LSDHLSELVENTISDLEASKCLSVEEGID- 5146
++ +T++Y R+ +NP Y L+ + L + ++L+ + + L+ S + +
Sbjct: 950 WLGYTYLYIRMLRNPTLYGLEADVLKRDITLEERRADLIHSAATILDKSNLIKYDRKSGY 1009
Query: 5147 LSPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIR 5326
+LG + S Y I++ T+ +N L L + + + E+ + R E+ +
Sbjct: 1010 FQVTDLGRIASYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELV 1069
Query: 5327 RLINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVD 5503
+L++ + +P K N LL A+ S+ + G +L SD I SA RLL+A+ +
Sbjct: 1070 KLLDRVPIPVKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFE 1128
Query: 5504 VISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDL 5683
++ GW LA + + +MV + ++ + L Q T ++ + E + + +DL
Sbjct: 1129 IVLKRGWAQLAEKALNLCKMVNKKMWSVQTPLRQFNGITNDILMKL-EKKDLAWDRYYDL 1187
Query: 5684 AEMDDDKRQELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+ + EL++M + + +F +FP +++ V
Sbjct: 1188 SSQE---LGELIRMPRMGRA-LHKFIHQFPKLNLAAHV 1221
Score = 80.9 bits (198), Expect(2) = 1e-16
Identities = 56/128 (43%), Positives = 71/128 (55%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ ND+CYEKVM AG+ QV IFVHSRKE KT R G D
Sbjct: 733 QLMNDLCYEKVMDVAGKHQVLIFVHSRKETAKTARAIRDTALAKDTLGRFLKEDSASREI 792
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H G+ R R LVE+L +GHV+VL+ TATLAW
Sbjct: 793 LTTHTDLVKS---NDLKDLLPYGFAIHHAGLNRADRQLVEDLFADGHVQVLVSTATLAWG 849
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 850 VNLPAHTV 857
Score = 36.2 bits (82), Expect(2) = 1e-16
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ D+ G
Sbjct: 854 AHTVIIKGTQIYDPEKGAWTELSPLDVMQMLGRAGRPQFDSYG 896
Score = 64.3 bits (155), Expect(2) = 3e-14
Identities = 40/85 (47%), Positives = 49/85 (57%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ D+ E IIITGH+EL YYL MN QLP+ SQFV K LA R
Sbjct: 888 GRPQFDSYGEGIIITGHNELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNARE 946
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGLQ 1307
+ +T YL++ M RNPT +GL+
Sbjct: 947 ACSWLGYT-YLYIRMLRNPTLYGLE 970
Score = 45.1 bits (105), Expect(2) = 3e-14
Identities = 24/43 (55%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH G+ R D LV +L +GH+QVLV TATL +
Sbjct: 806 KDLLPYGFAIHHAGLNRADRQLVEDLFADGHVQVLVSTATLAW 848
Score = 79.3 bits (194), Expect = 2e-11
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 4/206 (1%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSV 1928
R Q M Y +V A+ GK L++V +RK TA + + T K +
Sbjct: 1570 RMQAMAKPTYTAIVQHAKNGK-PALVYVPTRKHVRLTAIDL----MTYSTADGGEKSSFM 1624
Query: 1929 SREILQTESGHVRSND--LKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATL 2102
R + E R +D L+ L G + G+ D+E+V LF G +QV V ++++
Sbjct: 1625 LRPVEDIEPFVERISDEILRGTLRNGVGYLHEGLTSLDQEVVSQLFEAGWIQVCVMSSSM 1684
Query: 2103 AWGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSE 2282
WGV+L AH V++ GTQ Y+ + T+ D+ QM+G A RP D S + +I+
Sbjct: 1685 CWGVSLSAHLVVVMGTQYYDGRENVHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPR 1744
Query: 2283 XXXXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1745 KEYYKKFLYEAFPVESHLHHYLHDNL 1770
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 1966 bits (5092), Expect = 0.0
Identities = 967/1263 (76%), Positives = 1096/1263 (86%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTV +AKEAC WL YTYLY+RM+RNPTLYGLPADAL D LEERRADL
Sbjct: 931 NAEIVLGTVLNAKEACKWLLYTYLYVRMVRNPTLYGLPADALKTDYALEERRADL----- 985
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
+H AA +L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 986 -----------VHSAAVLLDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1034
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1035 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1094
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+IS+LKLEGLSL+SDMV+ITQSA RLM+A+FEI L RGWAQ+AEKAL CK++ K+MW+V
Sbjct: 1095 YISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQLAEKALKWCKMISKRMWSV 1154
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP +IL K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKLN
Sbjct: 1155 QTPLRQFHGIPNEILMKLEKKDLAWERYYDLSSQELGELIRFPKMGRTLHKFIHQFPKLN 1214
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITR+VLRVELTITPDF WED+VHGYVE FW+IVEDNDGE+ILHHEYFMLKKQY
Sbjct: 1215 LAAHVQPITRSVLRVELTITPDFQWEDKVHGYVESFWIIVEDNDGEYILHHEYFMLKKQY 1274
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSDKWL S +VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1275 IDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSLTVLPVSFRHLILPEKYPPPTELLDLQ 1334
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ+F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1335 PLPVTALRNPAYEALYQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1394
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + +R VYIAP+EALAKER++DW A+DLKLLEKGQ+
Sbjct: 1395 NHQKGPDSTIRAVYIAPLEALAKERFNDWKTKFGDHLGMRVVELTGETASDLKLLEKGQL 1454
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY++S E
Sbjct: 1455 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYISS--QVE 1512
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEAR QAM
Sbjct: 1513 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAM 1572
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHAR GKPAL++VPTR+ +RLTA D +TYS+ DS + P+FLL+S EELEPF
Sbjct: 1573 TKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLLRSAEELEPF 1632
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+ ++ EPML TL++G+GYLHEGL++ D +IV LF+ GWIQVCV + +MCWG+ L AHL
Sbjct: 1633 VERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCWGVPLSAHL 1692
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN HTDYPV DLLQMMGHA+RPL+D+SGKC+ILCHAP+K+YY+KFLYE
Sbjct: 1693 VVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKDYYKKFLYE 1752
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVESHLQHYLHDNLNAEVV GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHRH
Sbjct: 1753 AFPVESHLQHYLHDNLNAEVVVGVIQNKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRH 1812
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSD LSELVENTISDLEASKC++VE+ LSPLNLGM+ S Y ISYTT+ERF+SS+TSKT
Sbjct: 1813 LSDQLSELVENTISDLEASKCVTVEDEFLLSPLNLGMIASYYYISYTTIERFSSSVTSKT 1872
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEILASASE+ +LP RPGEEELIRRLINH R+SFENP+ TDPHVKANALL AHFS
Sbjct: 1873 KLKGLLEILASASEFEQLPIRPGEEELIRRLINHLRFSFENPKYTDPHVKANALLQAHFS 1932
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R V GNL SDQ+E+L+SA+RLLQAMVDVISSNGWL LALLTMEVSQMVTQG++ERDSML
Sbjct: 1933 RQMVGGNLASDQQEVLLSATRLLQAMVDVISSNGWLSLALLTMEVSQMVTQGMWERDSML 1992
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTKELAK+CQENPG+SIETVFDL EM+D++R+ELLQMSDLQLLDIARFC RFPNI
Sbjct: 1993 LQLPHFTKELAKKCQENPGRSIETVFDLVEMEDNERRELLQMSDLQLLDIARFCNRFPNI 2052
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D+TY V++ TLERDL +EVGPV APRYPK KEEGWWLVVGD+K+N
Sbjct: 2053 DLTYHVVDSDNVSAGDDVSVQVTLERDLEGRTEVGPVFAPRYPKTKEEGWWLVVGDTKSN 2112
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRV+LQRKSKVKL+F AP+EAG ++YTLYFMCDSYLGCDQEY+FT+DVKEA A
Sbjct: 2113 QLLAIKRVTLQRKSKVKLDFAAPAEAGMRNYTLYFMCDSYLGCDQEYNFTLDVKEA-MAE 2171
Query: 6140 DDS 6148
DDS
Sbjct: 2172 DDS 2174
Score = 359 bits (921), Expect(2) = 7e-99
Identities = 186/257 (72%), Positives = 211/257 (82%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+A+F RV + + + +YIGIT KKPLQRFQLMND+CYE
Sbjct: 680 LSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQYIGITVKKPLQRFQLMNDVCYE 739
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV++ AGKHQVLIFVHSRKET KTARAIRD ALANDTL +FLKEDS++RE+LQ+++ V+
Sbjct: 740 KVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTRELLQSQTELVK 799
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM RTDR+LVE LF G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 800 SNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKG 859
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLDV QMLGRAGRPQYDT EGII+TGHSE MN QLPIE
Sbjct: 860 TQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIE 919
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 920 SQFISKLADQLNAEIVL 936
Score = 33.1 bits (74), Expect(2) = 7e-99
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ R + Y + V EL GDQ+LT ++ + E + + T
Sbjct: 583 NLSKRLEHYGVTVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 642
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SI+ARTIR +ET KEHI
Sbjct: 643 VDEIHLLHDNR--GPVLESIIARTIRQIETTKEHI 675
Score = 251 bits (641), Expect = 3e-63
Identities = 196/748 (26%), Positives = 352/748 (47%), Gaps = 16/748 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKT--- 3772
EL+ + +P A P F + Q N +Q++V+ + +N+L+ APTG+GKT
Sbjct: 488 ELVKISSIPEWA--QPAFSGMTQ----LNRVQSKVYETALFSPENILLCAPTGAGKTNVA 541
Query: 3773 ---ICAEFAVLRNHQKGL--NGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXX 3937
I + A+ RN G + ++VY+AP++AL E +
Sbjct: 542 MLTILQQIALNRNEDDGTFNHNNYKIVYVAPMKALVAEVVGNLSKRLEHYGVTVKELSGD 601
Query: 3938 XXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXX 4117
T ++ E+ Q++++TPEKWD ++R R + Q V L I+D
Sbjct: 602 QTLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLESI 660
Query: 4118 VSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHI 4294
++R + ++ IR+V LS +L N +D+ ++ GLF+F RPVPL
Sbjct: 661 IART--IRQIETTKEHIRLVGLSATLPNYEDVAVFLRVDLKKGLFHFDNSYRPVPLAQQY 718
Query: 4295 QGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADF--VTYSNADS 4468
G+ + R Q M Y ++ A + L+FV +R+ + TA +N
Sbjct: 719 IGITVKKPLQRFQLMNDVCYEKVISIAGKHQ-VLIFVHSRKETSKTARAIRDTALANDTL 777
Query: 4469 GERPLFLLKSEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQV 4648
G+ + E L+ VK L L +G H G+ D ++V LF G +QV
Sbjct: 778 GKFLKEDSLTRELLQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQV 837
Query: 4649 CVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCM 4828
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D G+ +
Sbjct: 838 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYGEGI 897
Query: 4829 ILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRR 5008
IL + +YY + + LP+ES L D LNAE+V G + N +EA ++ +T++Y R
Sbjct: 898 ILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVLNAKEACKWLLYTYLYVR 957
Query: 5009 LSQNPNYYNLQGVSHR---HLSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVG 5176
+ +NP Y L + + L + ++LV + L+ + + + +LG +
Sbjct: 958 MVRNPTLYGLPADALKTDYALEERRADLVHSAAVLLDKNNLVKYDRKSGYFQVTDLGRIA 1017
Query: 5177 S*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSF 5356
S Y I++ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1018 SYYYITHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPI 1077
Query: 5357 ENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
+ +P K N LL A+ SR + G +L SD I SA+RL++A+ +++ GW L
Sbjct: 1078 KE-SLEEPSAKINVLLQAYISRLKLEGLSLSSDMVYITQSAARLMRALFEIVLKRGWAQL 1136
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
A ++ +M+++ ++ + L Q E+ + E + E +DL+ + E
Sbjct: 1137 AEKALKWCKMISKRMWSVQTPLRQFHGIPNEILMKL-EKKDLAWERYYDLSSQE---LGE 1192
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEV 5797
L++ + + +F +FP +++ V
Sbjct: 1193 LIRFPKMG-RTLHKFIHQFPKLNLAAHV 1219
Score = 83.6 bits (205), Expect(2) = 3e-18
Identities = 55/125 (44%), Positives = 70/125 (56%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*-------------CKP*DFT--- 564
Q+ ND+CYEKV++ AG+ QV IFVHSRKE KT R K T
Sbjct: 731 QLMNDVCYEKVISIAGKHQVLIFVHSRKETSKTARAIRDTALANDTLGKFLKEDSLTREL 790
Query: 565 --D*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
E + + L+ A+H GM RT R LVE+L +GHV+VL+ TATLAW +NL
Sbjct: 791 LQSQTELVKSNDLKDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAWGVNL 850
Query: 739 PAHTL 753
PAHT+
Sbjct: 851 PAHTV 855
Score = 39.3 bits (90), Expect(2) = 3e-18
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+DT G
Sbjct: 852 AHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDTYG 894
Score = 67.4 bits (163), Expect(2) = 2e-16
Identities = 40/84 (47%), Positives = 49/84 (58%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+DT E II+TGHSEL YYL MN QLP+ SQF+ K LA +
Sbjct: 886 GRPQYDTYGEGIILTGHSELQYYLSLMNQQLPIESQFISK-LADQLNAEIVLGTVLNAKE 944
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
++T YL+V M RNPT +GL
Sbjct: 945 ACKWLLYT-YLYVRMVRNPTLYGL 967
Score = 48.9 bits (115), Expect(2) = 2e-16
Identities = 26/43 (60%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +1
Query: 904 KDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
KDLL YG IH GM RTD LV +L +GH+QVLV TATL +
Sbjct: 804 KDLLPYGFAIHHAGMVRTDRQLVEDLFADGHVQVLVSTATLAW 846
Score = 91.7 bits (226), Expect = 4e-15
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARAGKHQ-VLIFVHSRKETVKTARAIRD-AALANDTLSRFLKEDSV 1928
R Q M Y +V A K + L++V +RK TA + +++ ++ FL
Sbjct: 1568 RMQAMTKPTYTAIVQHARKGKPALVYVPTRKHARLTAVDLMTYSSMDSEDTPIFLLR--- 1624
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
S E L+ + L++ L YG + G++ TD+++V+ LF G +QV V T+ W
Sbjct: 1625 SAEELEPFVERINEPMLQETLKYGVGYLHEGLSATDQDIVKTLFETGWIQVCVMNGTMCW 1684
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ + A T+ D+ QM+G A RP D+S + +I+
Sbjct: 1685 GVPLSAHLVVVMGTQYYDGRENAHTDYPVTDLLQMMGHASRPLVDSSGKCVILCHAPRKD 1744
Query: 2289 XXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES L D L
Sbjct: 1745 YYKKFLYEAFPVESHLQHYLHDNL 1768
>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Citrus sinensis]
gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
nuclear ribonucleoprotein 200 kDa helicase-like isoform
X2 [Citrus sinensis]
Length = 2179
Score = 1945 bits (5038), Expect = 0.0
Identities = 963/1259 (76%), Positives = 1081/1259 (85%), Gaps = 1/1259 (0%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+AKEACNW+ YTYLYIRMLRNP LYGL + L D TL ERRADL
Sbjct: 938 NAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADL----- 992
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
+H AAT+L++NNLVKY++KSG FQVTDLGRIAS+YYISHGTISTY+EHL
Sbjct: 993 -----------VHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 1041
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDIELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIPVKESLEEPSAKINVLLQA
Sbjct: 1042 KPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPVKESLEEPSAKINVLLQA 1101
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMVFITQSAGRL++A+FEI L RGWAQ+AEKALNL K+V K+MW+V
Sbjct: 1102 YISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQLAEKALNLSKMVTKRMWSV 1161
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQF+GIP +IL K+EK++ AWE YYDLS QE+ +L PK+G+ LHK++HQFPKL
Sbjct: 1162 QTPLRQFNGIPNEILMKLEKKDFAWERYYDLSPQELGELIRFPKMGRTLHKFVHQFPKLI 1221
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVL+VELTITPDFLW+D+VHGYVEPFWVIVEDNDGE+ILHHEYFMLKKQY
Sbjct: 1222 LAAHVQPITRTVLKVELTITPDFLWDDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQY 1281
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
I+EDH+LNFTVPIYEPLPPQYF+RVVSDKWL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1282 IEEDHSLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1341
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +EALYQ F HFNPIQTQVF LYNTDDNVLVAAPTGSGKTIC+EFA+LR
Sbjct: 1342 PLPVTALRNPLYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICSEFAILR 1401
Query: 3800 NHQKGLN-GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQ 3976
NHQK G+MR VYIAP+EALAKERY DW A DLKLLEKGQ
Sbjct: 1402 NHQKASETGVMRAVYIAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQ 1461
Query: 3977 VVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLS 4156
++ISTPEKWD+LSR WK RK+VQQVSLFIID VSRMRY+AS
Sbjct: 1462 IIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIAS--QV 1519
Query: 4157 ENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQA 4336
ENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEAR QA
Sbjct: 1520 ENKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQA 1579
Query: 4337 MTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEP 4516
MT+PT+TAIVQHA+N KPAL+FVP+R+ RLTA D +TYS+ D ++ FLL EE+EP
Sbjct: 1580 MTKPTFTAIVQHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPAEEVEP 1639
Query: 4517 FISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAH 4696
FI ++E ML ATLRHG+GYLHEGL D E+VS LF+AG I+VCV SSSMCWG+ L AH
Sbjct: 1640 FIDNIQEEMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAH 1699
Query: 4697 LVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLY 4876
LVVVMGTQYYDG+EN HTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFLY
Sbjct: 1700 LVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLY 1759
Query: 4877 EALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHR 5056
+A PVESHL H+LHDN NAE+V GVI NKQ+AVDY+TWTFMYRRL+QNPNYYNLQGVSHR
Sbjct: 1760 DAFPVESHLHHFLHDNFNAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHR 1819
Query: 5057 HLSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSK 5236
HLSDHLSELVENTISDLEASKC+ +EE +DLSP N GM+ S Y ISYTT+ERF+SSLT K
Sbjct: 1820 HLSDHLSELVENTISDLEASKCIIIEEDMDLSPSNHGMIASYYYISYTTIERFSSSLTPK 1879
Query: 5237 TKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHF 5416
T++KGLLE+LASASEYA+LP RPGEEE++RRLI+HQR+SFENP+ TDPHVKANALL AHF
Sbjct: 1880 TRMKGLLEVLASASEYAQLPIRPGEEEVVRRLIHHQRFSFENPKFTDPHVKANALLQAHF 1939
Query: 5417 SRHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSM 5596
SR V GNL DQ E+L+SASRLLQAMVDVISSNGWL LALL MEVSQMVTQGI+ERDSM
Sbjct: 1940 SRQQVGGNLKLDQEEVLLSASRLLQAMVDVISSNGWLSLALLAMEVSQMVTQGIWERDSM 1999
Query: 5597 LLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPN 5776
LLQLPHFTK+LAKRCQENPGKSIETVFDL EM+DD+R+ELLQMSD+QLLDIARFC RFPN
Sbjct: 2000 LLQLPHFTKDLAKRCQENPGKSIETVFDLVEMEDDERRELLQMSDVQLLDIARFCNRFPN 2059
Query: 5777 IDMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKT 5956
IDM++EV + LERDL +EVGPV + RYPK KEEGWWLVVGD+KT
Sbjct: 2060 IDMSFEVQDSENVRAGEDITLQVVLERDLEGRTEVGPVYSNRYPKAKEEGWWLVVGDTKT 2119
Query: 5957 NQLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGE 6133
NQLLAIKRVSLQRKS+VKL+F AP+EAG+K+YTLYFMCDSY+GCDQEY+FT+DVKEAGE
Sbjct: 2120 NQLLAIKRVSLQRKSRVKLDFAAPAEAGKKTYTLYFMCDSYMGCDQEYAFTVDVKEAGE 2178
Score = 362 bits (930), Expect(2) = e-101
Identities = 191/257 (74%), Positives = 209/257 (81%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + + +YIGI KKPLQRFQLMND+CYE
Sbjct: 687 LSATLPNYEDVALFLRVNLEKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMNDLCYE 746
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KVVA AGKHQVLIFVHSRKET KTARAIRD AL NDTL RFLKEDSVSREILQ+ + V+
Sbjct: 747 KVVAVAGKHQVLIFVHSRKETAKTARAIRDTALENDTLGRFLKEDSVSREILQSHTDMVK 806
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
SNDLKDLLPYGFAIH+AGM R DR+LVE LFG G VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 807 SNDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWGVNLPAHTVIIKG 866
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIYNPEKGAWTELSPLD+ QMLGRAGRPQYD+ EGIIITGHSE MN QLPIE
Sbjct: 867 TQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIE 926
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 927 SQFVSKLADQLNAEIVL 943
Score = 36.2 bits (82), Expect(2) = e-101
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R + Y +KV EL GDQ+LT ++ + E + + T
Sbjct: 590 NLSNRLQMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 649
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 650 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 682
Score = 261 bits (666), Expect = 4e-66
Identities = 206/748 (27%), Positives = 356/748 (47%), Gaps = 16/748 (2%)
Frame = +2
Query: 3602 ELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKT--- 3772
+L+ + +P A P F+ + Q N +Q++V+ + ++ DN+L+ APTG+GKT
Sbjct: 496 KLIKISEMPEWA--QPAFKGMTQ----LNRVQSRVYKSALSSADNILLCAPTGAGKTNVA 549
Query: 3773 ---ICAEFAVLRNHQKGLN-GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXX 3940
I + A+ RN N ++VY+AP++AL E +
Sbjct: 550 VLTILQQLALNRNDDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQMYDVKVRELSGDQ 609
Query: 3941 XATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXV 4120
T ++ E+ Q++++TPEKWD ++R R + Q V L IID V
Sbjct: 610 TLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIV 668
Query: 4121 SRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQ 4297
+R V ++ IR+V LS +L N +D+ ++ GLF F RPVPL
Sbjct: 669 ART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVNLEKGLFYFDNSYRPVPLSQQYI 726
Query: 4298 GVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGER 4477
G+ + R Q M Y +V A + L+FV +R+ + TA + + ++
Sbjct: 727 GIQVKKPLQRFQLMNDLCYEKVVAVAGKHQ-VLIFVHSRKETAKTARA-IRDTALENDTL 784
Query: 4478 PLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQV 4648
FL + S E L+ VK L L +G H G+T D ++V LF G +QV
Sbjct: 785 GRFLKEDSVSREILQSHTDMVKSNDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQV 844
Query: 4649 CVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCM 4828
V+++++ WG+ LPAH V++ GTQ Y+ + T+ D++QM+G A RP D+ G+ +
Sbjct: 845 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYGEGI 904
Query: 4829 ILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRR 5008
I+ + YY + + LP+ES L D LNAE+V G + N +EA ++I +T++Y R
Sbjct: 905 IITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIR 964
Query: 5009 LSQNPNYYNLQGVSHRH---LSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVG 5176
+ +NP Y L + L + ++LV + L+ + + + +LG +
Sbjct: 965 MLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIA 1024
Query: 5177 S*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSF 5356
S Y IS+ T+ +N L L + + + E+ + R E+ + +L++
Sbjct: 1025 SYYYISHGTISTYNEHLKPTMGDIELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPV 1084
Query: 5357 ENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDL 5533
+ +P K N LL A+ S+ + G +L SD I SA RLL+A+ +++ GW L
Sbjct: 1085 KE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVFITQSAGRLLRALFEIVLKRGWAQL 1143
Query: 5534 ALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQE 5713
A + +S+MVT+ ++ + L Q E+ + E + E +DL+ + E
Sbjct: 1144 AEKALNLSKMVTKRMWSVQTPLRQFNGIPNEILMKL-EKKDFAWERYYDLSPQE---LGE 1199
Query: 5714 LLQMSDLQLLDIARFCERFPNIDMTYEV 5797
L++ + + +F +FP + + V
Sbjct: 1200 LIRFPKMG-RTLHKFVHQFPKLILAAHV 1226
Score = 83.2 bits (204), Expect(2) = 1e-17
Identities = 57/128 (44%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKR------------G*CKP*D------ 558
Q+ ND+CYEKV+A AG+ QV IFVHSRKE KT R G D
Sbjct: 738 QLMNDLCYEKVVAVAGKHQVLIFVHSRKETAKTARAIRDTALENDTLGRFLKEDSVSREI 797
Query: 559 ---FTD*NES**VH*SEGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWD 729
TD +S + + L+ A+H GM R R LVE+L +GHV+VL+ TATLAW
Sbjct: 798 LQSHTDMVKS---NDLKDLLPYGFAIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWG 854
Query: 730 INLPAHTL 753
+NLPAHT+
Sbjct: 855 VNLPAHTV 862
Score = 37.7 bits (86), Expect(2) = 1e-17
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ+D+ G
Sbjct: 859 AHTVIIKGTQIYNPEKGAWTELSPLDIMQMLGRAGRPQYDSYG 901
Score = 88.2 bits (217), Expect = 5e-14
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 2/202 (0%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARAGKHQ-VLIFVHSRKETVKTARAIRD-AALANDTLSRFLKEDSV 1928
R Q M + +V A + L+FV SRK TA + +++ D S FL +
Sbjct: 1576 RMQAMTKPTFTAIVQHAKNEKPALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPA- 1634
Query: 1929 SREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAW 2108
E ++ +++ LK L +G + G+ +TD+E+V LF G ++V V ++++ W
Sbjct: 1635 --EEVEPFIDNIQEEMLKATLRHGVGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCW 1692
Query: 2109 GVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXX 2288
GV L AH V++ GTQ Y+ ++ A T+ D+ QM+G A RP D S + +I+
Sbjct: 1693 GVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKE 1752
Query: 2289 XXXXXMNNQLPIESQFVSKLAD 2354
+ + P+ES L D
Sbjct: 1753 YYKKFLYDAFPVESHLHHFLHD 1774
Score = 62.8 bits (151), Expect = 2e-06
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D+ E IIITGHSEL YYL MN QLP+ SQFV K LA +
Sbjct: 893 GRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNAKE 951
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL-QQML*VETSLGKK 1343
+T YL++ M RNP +GL ++L + +LG++
Sbjct: 952 ACNWIGYT-YLYIRMLRNPALYGLAPEVLKEDITLGER 988
>gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Morus notabilis]
Length = 2183
Score = 1936 bits (5014), Expect = 0.0
Identities = 957/1260 (75%), Positives = 1079/1260 (85%), Gaps = 2/1260 (0%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EA WL YTYLY+RM+RNP LYG+ AD L RD TL ERRADL
Sbjct: 939 NAEIVLGTVQNAEEAIQWLGYTYLYVRMVRNPALYGMEADVLKRDMTLRERRADL----- 993
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNL+KY++KSG FQVTDLGRIAS+YYI+HGTISTY+EHL
Sbjct: 994 -----------IHSAATILDKNNLIKYDRKSGYFQVTDLGRIASYYYITHGTISTYNEHL 1042
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGD ELCR+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KESLEEPSAKINVLLQA
Sbjct: 1043 KPTMGDTELCRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKESLEEPSAKINVLLQA 1102
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMV+ITQSAGRL++A+FEI + RGWAQVAEKALNL K+V K+MW+V
Sbjct: 1103 YISQLKLEGLSLTSDMVYITQSAGRLLRALFEIVVKRGWAQVAEKALNLFKMVNKRMWSV 1162
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGI D+L K+EK+++AWE YYDLSSQE+ +L PK+G+ LHK+IHQFPKL+
Sbjct: 1163 QTPLRQFHGIANDVLMKLEKKDLAWERYYDLSSQELGELIRAPKMGRTLHKFIHQFPKLD 1222
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
LAAH+QPITRTVLRVELTITPDF WED+VHGYVEPFWVIVEDNDGE+ILHHEYFMLKKQY
Sbjct: 1223 LAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQY 1282
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPIYEPLPPQYF+RVVSD+WL SQ+VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1283 IDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQ 1342
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPV+ALRN +E LY++F HFNP+QTQVF LYN+DDNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1343 PLPVSALRNSSYEDLYKDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILR 1402
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQKG + MRVVYIAP+EALAKERY DW ATDLKLLEKGQ+
Sbjct: 1403 NHQKGADS-MRVVYIAPIEALAKERYRDWEKKFGEHLKMRIVQLTGETATDLKLLEKGQI 1461
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RKHVQQVSLFIID VSRMRY+AS E
Sbjct: 1462 IISTPEKWDALSRRWKQRKHVQQVSLFIIDELHLIGGQVGPILEVIVSRMRYIAS--QVE 1519
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIA--NFEARKQ 4333
NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVD + NFEAR Q
Sbjct: 1520 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDTSAGNFEARMQ 1579
Query: 4334 AMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELE 4513
AMT+PTYTAIVQHA++GKPA+++VPTR+ RLTA D V YS DS FLL+S ++LE
Sbjct: 1580 AMTKPTYTAIVQHAKDGKPAIVYVPTRKHVRLTAEDLVAYSQVDSSGNTPFLLQSLKDLE 1639
Query: 4514 PFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPA 4693
P + V E +L ATLRHG+GYLHEGL+S+D E+VS LF+AG IQVCV SSSMCWG+ L A
Sbjct: 1640 PLVDGVHEEILKATLRHGVGYLHEGLSSLDQEVVSQLFEAGRIQVCVMSSSMCWGVPLSA 1699
Query: 4694 HLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFL 4873
HLVVVMGTQYYDGRENIHTDYPV DLLQMMGHA+RPLLDNSGKC+ILCHAP+KEYY+KFL
Sbjct: 1700 HLVVVMGTQYYDGRENIHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFL 1759
Query: 4874 YEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSH 5053
YEA PVESH HYLHDNLNAE+V G+I NKQ+AVDY+TWTFMYRRL+QNPNYYN+QGVSH
Sbjct: 1760 YEAFPVESHFHHYLHDNLNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNIQGVSH 1819
Query: 5054 RHLSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTS 5233
RHLSDHLSELVE+T++DLEASKC+ +E+ +DLSP NLG++ S Y ISY T+ERF+SSL+S
Sbjct: 1820 RHLSDHLSELVEHTLNDLEASKCVVIEDDMDLSPSNLGLIASYYYISYATIERFSSSLSS 1879
Query: 5234 KTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAH 5413
KTK+KGL+EILASASEYA+LP RPGEE+++RRLINHQR+SFE+P C DPHVKANALL AH
Sbjct: 1880 KTKMKGLIEILASASEYAQLPVRPGEEDVVRRLINHQRFSFESPNCGDPHVKANALLQAH 1939
Query: 5414 FSRHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDS 5593
FSRH+V GNL DQRE+L+SASRLLQAMVDVISSNGWL+LALL MEVSQMVTQG++ERDS
Sbjct: 1940 FSRHSVGGNLALDQREVLLSASRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDS 1999
Query: 5594 MLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFP 5773
MLLQLPHFTKELAKRCQE + IETVFDL EMDD R+ELLQM+DLQLLDIARFC RFP
Sbjct: 2000 MLLQLPHFTKELAKRCQE---RGIETVFDLVEMDDGDRRELLQMTDLQLLDIARFCNRFP 2056
Query: 5774 NIDMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSK 5953
NIDM YEVLE TLERDL +EVGPVD PRYPK KEEGWWLVVGD+K
Sbjct: 2057 NIDMVYEVLESDNVRAGDVVTLQVTLERDLEGRTEVGPVDNPRYPKAKEEGWWLVVGDTK 2116
Query: 5954 TNQLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGE 6133
+N LLAIKRVSLQRKSKVKL+F AP +AG+KSYTLYFMCDSYLGCDQEY FT+DVK G+
Sbjct: 2117 SNSLLAIKRVSLQRKSKVKLDFTAPLDAGKKSYTLYFMCDSYLGCDQEYPFTVDVKREGD 2176
Score = 349 bits (896), Expect(2) = 5e-98
Identities = 181/257 (70%), Positives = 208/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIG+ +KPLQRFQLMND+CYE
Sbjct: 688 LSATLPNYEDVALFLRVDHKKGLFYFDNSYRPVPLSQQYIGVQVRKPLQRFQLMNDLCYE 747
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTARAIRD ALANDTLSRFL+EDS SREIL T + V+
Sbjct: 748 KVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSRFLREDSASREILHTHTDLVK 807
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
+NDLKDL+PYGFAIH+AG+ RTDR+LVE LF G +QVLV TATLAWGVNL AHTVIIKG
Sbjct: 808 NNDLKDLVPYGFAIHHAGLNRTDRQLVEELFADGHIQVLVSTATLAWGVNLPAHTVIIKG 867
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQIY+PEKGAWTELSPLD+ QMLGRAGRPQ+D+ EGIIITGH+E MN QLPIE
Sbjct: 868 TQIYDPEKGAWTELSPLDIMQMLGRAGRPQFDSYGEGIIITGHTELQYYLSLMNQQLPIE 927
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQFVSKLADQL ++ L
Sbjct: 928 SQFVSKLADQLNAEIVL 944
Score = 40.0 bits (92), Expect(2) = 5e-98
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ HR + Y +KV EL GDQSLT ++ + E + + T
Sbjct: 591 NLSHRLQDYGVKVKELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLI 650
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KEHI
Sbjct: 651 IDEIHLLHDNR--GPVLESIVARTVRQIETTKEHI 683
Score = 257 bits (657), Expect = 4e-65
Identities = 201/757 (26%), Positives = 356/757 (47%), Gaps = 17/757 (2%)
Frame = +2
Query: 3578 PEKYPLPTELLDLQPLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPT 3757
P+ + +L+ + +P A P F+ + Q N +Q++V+ DN+L+ APT
Sbjct: 488 PKAFDPDEKLIKISAMPEWA--QPAFKGMTQ----LNRVQSKVYETALFKADNILLCAPT 541
Query: 3758 GSGKTICAEFAVLRN---HQKGLNGIM-----RVVYIAPVEALAKERYHDWXXXXXXXXX 3913
G+GKT A +L+ H +G + ++VY+AP++AL E +
Sbjct: 542 GAGKTNVAVLTILQQIGLHMTREDGSINHNDYKIVYVAPMKALVAEVVGNLSHRLQDYGV 601
Query: 3914 XXXXXXXXXXATDLKLLEKGQVVISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXX 4093
T ++ E+ Q++++TPEKWD ++R R + Q V L IID
Sbjct: 602 KVKELSGDQSLTRQQI-EETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDN 660
Query: 4094 XXXXXXXXVSRMRYVASCNLSENKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVR 4270
V+R V ++ IR+V LS +L N +D+ ++ GLF F R
Sbjct: 661 RGPVLESIVART--VRQIETTKEHIRLVGLSATLPNYEDVALFLRVDHKKGLFYFDNSYR 718
Query: 4271 PVPLEIHIQGVDIANFEARKQAMTRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVT 4450
PVPL GV + R Q M Y ++ A + L+FV +R+ + TA
Sbjct: 719 PVPLSQQYIGVQVRKPLQRFQLMNDLCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD 777
Query: 4451 YSNADSGERPLFLLK---SEEELEPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSH 4621
+ A+ FL + S E L VK L + +G H GL D ++V
Sbjct: 778 TALAND-TLSRFLREDSASREILHTHTDLVKNNDLKDLVPYGFAIHHAGLNRTDRQLVEE 836
Query: 4622 LFDAGWIQVCVASSSMCWGMALPAHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRP 4801
LF G IQV V+++++ WG+ LPAH V++ GTQ YD + T+ D++QM+G A RP
Sbjct: 837 LFADGHIQVLVSTATLAWGVNLPAHTVIIKGTQIYDPEKGAWTELSPLDIMQMLGRAGRP 896
Query: 4802 LLDNSGKCMILCHAPKKEYYRKFLYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDY 4981
D+ G+ +I+ + +YY + + LP+ES L D LNAE+V G + N +EA+ +
Sbjct: 897 QFDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAEEAIQW 956
Query: 4982 ITWTFMYRRLSQNPNYYNLQGVSHRH---LSDHLSELVENTISDLEASKCLSVEEGID-L 5149
+ +T++Y R+ +NP Y ++ + L + ++L+ + + L+ + + +
Sbjct: 957 LGYTYLYVRMVRNPALYGMEADVLKRDMTLRERRADLIHSAATILDKNNLIKYDRKSGYF 1016
Query: 5150 SPLNLGMVGS*YCISYTTMERFNSSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRR 5329
+LG + S Y I++ T+ +N L L + + + E+ + R E+ + +
Sbjct: 1017 QVTDLGRIASYYYITHGTISTYNEHLKPTMGDTELCRLFSLSEEFKYVTVRQDEKMELAK 1076
Query: 5330 LINHQRYSFENPRCTDPHVKANALLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDV 5506
L++ + +P K N LL A+ S+ + G +L SD I SA RLL+A+ ++
Sbjct: 1077 LLDRVPIPIKE-SLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLLRALFEI 1135
Query: 5507 ISSNGWLDLALLTMEVSQMVTQGIFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLA 5686
+ GW +A + + +MV + ++ + L Q ++ + E + E +DL+
Sbjct: 1136 VVKRGWAQVAEKALNLFKMVNKRMWSVQTPLRQFHGIANDVLMKL-EKKDLAWERYYDLS 1194
Query: 5687 EMDDDKRQELLQMSDLQLLDIARFCERFPNIDMTYEV 5797
+ EL++ + + +F +FP +D+ V
Sbjct: 1195 SQE---LGELIRAPKMG-RTLHKFIHQFPKLDLAAHV 1227
Score = 85.9 bits (211), Expect(2) = 5e-18
Identities = 57/125 (45%), Positives = 69/125 (55%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*-----------NES 579
Q+ ND+CYEKVMA AG+ QV IFVHSRKE KT R D E
Sbjct: 739 QLMNDLCYEKVMAVAGKHQVLIFVHSRKETAKTARAIRDTALANDTLSRFLREDSASREI 798
Query: 580 **VH*S-------EGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
H + LV A+H G+ RT R LVEEL +GH++VL+ TATLAW +NL
Sbjct: 799 LHTHTDLVKNNDLKDLVPYGFAIHHAGLNRTDRQLVEELFADGHIQVLVSTATLAWGVNL 858
Query: 739 PAHTL 753
PAHT+
Sbjct: 859 PAHTV 863
Score = 36.2 bits (82), Expect(2) = 5e-18
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT+IY QMLGR GRPQ D+ G
Sbjct: 860 AHTVIIKGTQIYDPEKGAWTELSPLDIMQMLGRAGRPQFDSYG 902
Score = 82.8 bits (203), Expect = 2e-12
Identities = 61/205 (29%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Frame = +3
Query: 1755 RFQLMNDICYEKVV--ARAGKHQVLIFVHSRKETVKTAR-AIRDAALANDTLSRFLKEDS 1925
R Q M Y +V A+ GK +++V +RK TA + + + + + FL +
Sbjct: 1577 RMQAMTKPTYTAIVQHAKDGK-PAIVYVPTRKHVRLTAEDLVAYSQVDSSGNTPFLLQ-- 1633
Query: 1926 VSREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLA 2105
S + L+ V LK L +G + G++ D+E+V LF G +QV V ++++
Sbjct: 1634 -SLKDLEPLVDGVHEEILKATLRHGVGYLHEGLSSLDQEVVSQLFEAGRIQVCVMSSSMC 1692
Query: 2106 WGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEX 2285
WGV L AH V++ GTQ Y+ + T+ D+ QM+G A RP D S + +I+
Sbjct: 1693 WGVPLSAHLVVVMGTQYYDGRENIHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRK 1752
Query: 2286 XXXXXXMNNQLPIESQFVSKLADQL 2360
+ P+ES F L D L
Sbjct: 1753 EYYKKFLYEAFPVESHFHHYLHDNL 1777
Score = 60.8 bits (146), Expect = 8e-06
Identities = 38/85 (44%), Positives = 47/85 (55%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ D+ E IIITGH+EL YYL MN QLP+ SQFV K LA
Sbjct: 894 GRPQFDSYGEGIIITGHTELQYYLSLMNQQLPIESQFVSK-LADQLNAEIVLGTVQNAEE 952
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGLQ 1307
+ +T YL+V M RNP +G++
Sbjct: 953 AIQWLGYT-YLYVRMVRNPALYGME 976
>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
subsp. lyrata]
Length = 2171
Score = 1905 bits (4936), Expect = 0.0
Identities = 932/1261 (73%), Positives = 1080/1261 (85%)
Frame = +2
Query: 2360 NAEIVLGTVQSAKEACNWLSYTYLYIRMLRNPTLYGLPADALSRDRTLEERRADLLRIQF 2539
NAEIVLGTVQ+A+EAC+WL YTYLYIRM+RNPTLYGL DAL++D LEERRADL
Sbjct: 926 NAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALAKDVVLEERRADL----- 980
Query: 2540 LFHYYHSFIFMIHYAATVLEKNNLVKYNQKSGSFQVTDLGRIASHYYISHGTISTYSEHL 2719
IH AAT+L+KNNLVKY++KSG FQVTDLGRIAS+YYI+HGTI+TY+EHL
Sbjct: 981 -----------IHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTIATYNEHL 1029
Query: 2720 KPTMGDIELCRVFLLSKEFKYVTVRQDEKMELAKLLNLVPIPVKESLEEPSAKINVLLQA 2899
KPTMGDI+L R+F LS+EFKYVTVRQDEKMELAKLL+ VPIP+KE+LEEPSAKINVLLQA
Sbjct: 1030 KPTMGDIDLYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKETLEEPSAKINVLLQA 1089
Query: 2900 HISQLKLEGLSLTSDMVFITQSAGRLMQAVFEIAL*RGWAQVAEKALNLCKLVGKQMWNV 3079
+ISQLKLEGLSLTSDMV+ITQSAGRL++A++EI L RGWAQ+AEKALNL K+VG++MW+V
Sbjct: 1090 YISQLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGRRMWSV 1149
Query: 3080 QTPLRQFHGIPKDILSKMEKRNIAWESYYDLSSQEIEKLTGQPKLGKLLHKYIHQFPKLN 3259
QTPLRQFHGIP DIL +EK+++ WE YYDLSSQE+ +L PK+G+ LHK+IHQFPKL
Sbjct: 1150 QTPLRQFHGIPNDILMNLEKKDLVWERYYDLSSQELGELIRSPKMGRPLHKFIHQFPKLT 1209
Query: 3260 LAAHIQPITRTVLRVELTITPDFLWEDRVHGYVEPFWVIVEDNDGEFILHHEYFMLKKQY 3439
L+AH+QPITRTVL+VELT+TPDFLW++++H YVEPFW+IVEDNDGE ILHHEYF+LK+QY
Sbjct: 1210 LSAHVQPITRTVLKVELTVTPDFLWDEKIHKYVEPFWIIVEDNDGEKILHHEYFLLKQQY 1269
Query: 3440 IDEDHTLNFTVPIYEPLPPQYFVRVVSDKWLNSQSVLPVSFRHLILPEKYPLPTELLDLQ 3619
IDEDHTLNFTVPI+EPLPPQYFVRVVSDKWL S++VLPVSFRHLILPEKYP PTELLDLQ
Sbjct: 1270 IDEDHTLNFTVPIFEPLPPQYFVRVVSDKWLGSETVLPVSFRHLILPEKYPPPTELLDLQ 1329
Query: 3620 PLPVTALRNPEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLR 3799
PLPVTALRNP +E LYQ+F HFNP+QTQVF LYNT+DNVLVAAPTGSGKTICAEFA+LR
Sbjct: 1330 PLPVTALRNPNYEILYQDFKHFNPVQTQVFTVLYNTNDNVLVAAPTGSGKTICAEFAILR 1389
Query: 3800 NHQKGLNGIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQV 3979
NHQ+G + MRVVYIAP+EA+AKE++ W A DLKLLEKGQ+
Sbjct: 1390 NHQEGPDATMRVVYIAPLEAIAKEQFRIWEGKFGKGLGLRVVELTGETALDLKLLEKGQI 1449
Query: 3980 VISTPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSE 4159
+ISTPEKWD+LSR WK RK+VQQVSLFI+D VSRMRY++S
Sbjct: 1450 IISTPEKWDALSRRWKQRKYVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYISS--QVN 1507
Query: 4160 NKIRIVALSTSLANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAM 4339
NKIRIVALSTSLANAKDLGEWIGA+SHGLFNFPPGVRPVPLEIHIQGVDI++FEAR QAM
Sbjct: 1508 NKIRIVALSTSLANAKDLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDISSFEARMQAM 1567
Query: 4340 TRPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSEEELEPF 4519
T+PTYTAIVQHA+N KPA++FVPTR+ RLTA D + YS+ D+ + P FLL EEL+PF
Sbjct: 1568 TKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPDFLLGQLEELDPF 1627
Query: 4520 ISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALPAHL 4699
+S+++E L TLRHG+GYLHEGL+S+D EIV+ LF+AG IQ CV SSS+CWG L AHL
Sbjct: 1628 VSQIREETLKETLRHGIGYLHEGLSSLDQEIVTQLFEAGRIQACVMSSSLCWGTPLTAHL 1687
Query: 4700 VVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKFLYE 4879
VVVMGTQYYDGREN H+DYPV DLLQMMG A+RPLLDN+GKC+I CHAP+KEYY+KFLYE
Sbjct: 1688 VVVMGTQYYDGRENSHSDYPVPDLLQMMGRASRPLLDNAGKCVIFCHAPQKEYYKKFLYE 1747
Query: 4880 ALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQGVSHRH 5059
A PVES LQH+LHDN NAEVV GVI NKQ+AVDY+TWTFMYRRL QNPNYYNLQGVSHRH
Sbjct: 1748 AFPVESQLQHFLHDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRH 1807
Query: 5060 LSDHLSELVENTISDLEASKCLSVEEGIDLSPLNLGMVGS*YCISYTTMERFNSSLTSKT 5239
LSDHLSELVENT+S+LEASKC+ +E+ ++LSPLNLGM+ S Y ISYTT+ERF+S L+SKT
Sbjct: 1808 LSDHLSELVENTLSNLEASKCIEIEDEMELSPLNLGMIASYYYISYTTIERFSSLLSSKT 1867
Query: 5240 KIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANALLHAHFS 5419
K+KGLLEIL SASEY +P RPGEE+ +RRLINHQR+SFENP+CTDPHVKANALL AHFS
Sbjct: 1868 KMKGLLEILTSASEYDMIPIRPGEEDTVRRLINHQRFSFENPKCTDPHVKANALLQAHFS 1927
Query: 5420 RHTVVGNLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQGIFERDSML 5599
R + GNL DQR++L+SA+RLLQAMVDVISSNGWL+LALL MEVSQMVTQG++ERDSML
Sbjct: 1928 RQNIGGNLAMDQRDVLLSATRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSML 1987
Query: 5600 LQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQELLQMSDLQLLDIARFCERFPNI 5779
LQLPHFTK+LAKRCQENPGK+IETVFDL EM+D++RQELL+MSD QLLDIARFC RFPNI
Sbjct: 1988 LQLPHFTKDLAKRCQENPGKNIETVFDLVEMEDEERQELLKMSDAQLLDIARFCNRFPNI 2047
Query: 5780 DMTYEVLEXXXXXXXXXXXXXXTLERDLGETSEVGPVDAPRYPKCKEEGWWLVVGDSKTN 5959
D+TYE++ LERD+ +EVGPVD+ RYPK KEEGWWLVVGD+KTN
Sbjct: 2048 DLTYEIVGSEEVNPGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTN 2107
Query: 5960 QLLAIKRVSLQRKSKVKLEFIAPSEAGRKSYTLYFMCDSYLGCDQEYSFTIDVKEAGEAG 6139
QLLAIKRVSLQ+K+KVKL+F PSE G KSYTLYFMCDSYLGCDQEYSF++DVK +G AG
Sbjct: 2108 QLLAIKRVSLQQKAKVKLDFTVPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDVKGSG-AG 2166
Query: 6140 D 6142
D
Sbjct: 2167 D 2167
Score = 344 bits (882), Expect(2) = 2e-94
Identities = 178/257 (69%), Positives = 207/257 (80%), Gaps = 3/257 (1%)
Frame = +3
Query: 1617 LSATVPNYKDMALFFRVG*DCSILATVTDHVHL---LKYIGITEKKPLQRFQLMNDICYE 1787
LSAT+PNY+D+ALF RV + + + +YIGI+ KKPLQRFQLMND+CY+
Sbjct: 675 LSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQ 734
Query: 1788 KVVARAGKHQVLIFVHSRKETVKTARAIRDAALANDTLSRFLKEDSVSREILQTESGHVR 1967
KV+A AGKHQVLIFVHSRKET KTA+AIRD A+ANDTLSRFLKEDSV+RE+LQ+ V+
Sbjct: 735 KVLAGAGKHQVLIFVHSRKETAKTAKAIRDTAMANDTLSRFLKEDSVTREVLQSHVDIVK 794
Query: 1968 SNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTATLAWGVNLLAHTVIIKG 2147
+ +LK++LPYGFAIH+AG+ R DRE+VE LF QG VQVLV TATLAWGVNL AHTVIIKG
Sbjct: 795 NGELKNILPYGFAIHHAGLTRGDREIVENLFAQGHVQVLVSTATLAWGVNLPAHTVIIKG 854
Query: 2148 TQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGHSEXXXXXXXMNNQLPIE 2327
TQ+YNPEKGAW ELSPLDV QMLGRAGRPQYD EGIIITG+SE MN QLPIE
Sbjct: 855 TQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDRHGEGIIITGYSELQYYLSLMNEQLPIE 914
Query: 2328 SQFVSKLADQLMLKLFL 2378
SQF+SKLADQL ++ L
Sbjct: 915 SQFISKLADQLNAEIVL 931
Score = 33.5 bits (75), Expect(2) = 2e-94
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Frame = +1
Query: 1381 NMRHR*KQYSIKVNELRGDQSLTFHKLMTHDNCYGS*EAGYYTRNRETEDPST------- 1539
N+ +R K Y + V EL GDQSLT ++ + E + + T
Sbjct: 578 NLSNRLKDYGVTVRELSGDQSLTGREIEETQIIVTTPEKWDIITRKSGDRTYTQLVRLLI 637
Query: 1540 ---------SR**GGIHASIVARTIRLVETIKEHI 1617
+R G + SIVART+R +ET KE+I
Sbjct: 638 IDEIHLLHDNR--GPVLESIVARTLRQIETTKENI 670
Score = 252 bits (643), Expect = 2e-63
Identities = 199/736 (27%), Positives = 342/736 (46%), Gaps = 19/736 (2%)
Frame = +2
Query: 3647 PEFEALYQEFMHFNPIQTQVFNALYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKGLN-- 3820
P F+ + Q N +Q++V++ +N+L+ APTG+GKT A +L+ + N
Sbjct: 497 PAFKGMQQ----LNRVQSKVYDTALFKAENLLLCAPTGAGKTNVAMLTILQQLEMNRNKD 552
Query: 3821 -----GIMRVVYIAPVEALAKERYHDWXXXXXXXXXXXXXXXXXXXATDLKLLEKGQVVI 3985
G ++VY+AP++AL E + T ++ E+ Q+++
Sbjct: 553 GTYNHGDYKIVYVAPMKALVAEVVGNLSNRLKDYGVTVRELSGDQSLTGREI-EETQIIV 611
Query: 3986 STPEKWDSLSR*WKVRKHVQQVSLFIIDXXXXXXXXXXXXXXXXVSRMRYVASCNLSENK 4165
+TPEKWD ++R R + Q V L IID V+R + ++
Sbjct: 612 TTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVART--LRQIETTKEN 669
Query: 4166 IRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDIANFEARKQAMT 4342
IR+V LS +L N +D+ ++ GLF F RPVPL G+ + R Q M
Sbjct: 670 IRLVGLSATLPNYEDVALFLRVDLKKGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQLMN 729
Query: 4343 RPTYTAIVQHARNGKPALMFVPTRRRSRLTAADFVTYSNADSGERPLFLLKSE----EEL 4510
Y ++ A + L+FV +R+ + TA A + + LK + E L
Sbjct: 730 DLCYQKVLAGAGKHQ-VLIFVHSRKETAKTAK--AIRDTAMANDTLSRFLKEDSVTREVL 786
Query: 4511 EPFISKVKEPMLSATLRHGLGYLHEGLTSVDVEIVSHLFDAGWIQVCVASSSMCWGMALP 4690
+ + VK L L +G H GLT D EIV +LF G +QV V+++++ WG+ LP
Sbjct: 787 QSHVDIVKNGELKNILPYGFAIHHAGLTRGDREIVENLFAQGHVQVLVSTATLAWGVNLP 846
Query: 4691 AHLVVVMGTQYYDGRENIHTDYPVADLLQMMGHATRPLLDNSGKCMILCHAPKKEYYRKF 4870
AH V++ GTQ Y+ + + D++QM+G A RP D G+ +I+ + +YY
Sbjct: 847 AHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDRHGEGIIITGYSELQYYLSL 906
Query: 4871 LYEALPVESHLQHYLHDNLNAEVVTGVINNKQEAVDYITWTFMYRRLSQNPNYYNLQG-- 5044
+ E LP+ES L D LNAE+V G + N +EA ++ +T++Y R+ +NP Y L
Sbjct: 907 MNEQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDA 966
Query: 5045 -VSHRHLSDHLSELVENTISDLEASKCLSVEEGID-LSPLNLGMVGS*YCISYTTMERFN 5218
L + ++L+ + + L+ + + + +LG + S Y I++ T+ +N
Sbjct: 967 LAKDVVLEERRADLIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTIATYN 1026
Query: 5219 SSLTSKTKIKGLLEILASASEYAELPSRPGEEELIRRLINHQRYSFENPRCTDPHVKANA 5398
L L + + + E+ + R E+ + +L++ + +P K N
Sbjct: 1027 EHLKPTMGDIDLYRLFSLSEEFKYVTVRQDEKMELAKLLDRVPIPIKE-TLEEPSAKINV 1085
Query: 5399 LLHAHFSRHTVVG-NLVSDQREILVSASRLLQAMVDVISSNGWLDLALLTMEVSQMVTQG 5575
LL A+ S+ + G +L SD I SA RL++A+ +++ GW LA + +S+MV +
Sbjct: 1086 LLQAYISQLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGRR 1145
Query: 5576 IFERDSMLLQLPHFTKELAKRCQENPGKSIETVFDLAEMDDDKRQEL--LQMSDLQLLDI 5749
++ + L Q ++ E E +DL+ QEL L S +
Sbjct: 1146 MWSVQTPLRQFHGIPNDILMNL-EKKDLVWERYYDLSS------QELGELIRSPKMGRPL 1198
Query: 5750 ARFCERFPNIDMTYEV 5797
+F +FP + ++ V
Sbjct: 1199 HKFIHQFPKLTLSAHV 1214
Score = 76.3 bits (186), Expect(3) = 2e-20
Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 19/125 (15%)
Frame = +1
Query: 436 QMTNDICYEKVMARAGRLQV-IFVHSRKERVKTKRG*CKP*DFTD*NES**VH*S----- 597
Q+ ND+CY+KV+A AG+ QV IFVHSRKE KT + D S
Sbjct: 726 QLMNDLCYQKVLAGAGKHQVLIFVHSRKETAKTAKAIRDTAMANDTLSRFLKEDSVTREV 785
Query: 598 -------------EGLVAVSLAVHRTGMARTYRCLVEELSDEGHVKVLILTATLAWDINL 738
+ ++ A+H G+ R R +VE L +GHV+VL+ TATLAW +NL
Sbjct: 786 LQSHVDIVKNGELKNILPYGFAIHHAGLTRGDREIVENLFAQGHVQVLVSTATLAWGVNL 845
Query: 739 PAHTL 753
PAHT+
Sbjct: 846 PAHTV 850
Score = 37.0 bits (84), Expect(3) = 2e-20
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 15/43 (34%)
Frame = +3
Query: 744 SHTLIIKGTRIYT---------------QMLGRVGRPQHDTSG 827
+HT+IIKGT++Y QMLGR GRPQ+D G
Sbjct: 847 AHTVIIKGTQVYNPEKGAWMELSPLDVMQMLGRAGRPQYDRHG 889
Score = 36.6 bits (83), Expect(3) = 2e-20
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = +2
Query: 347 GLFHFDNSYRPCPLVELYT*TTKKKPLQ 430
GLF FD SYRP PL + Y + KKPLQ
Sbjct: 696 GLFKFDRSYRPVPLHQQYIGISVKKPLQ 723
Score = 84.7 bits (208), Expect = 5e-13
Identities = 60/206 (29%), Positives = 94/206 (45%), Gaps = 6/206 (2%)
Frame = +3
Query: 1755 RFQLMNDICYEKVVARA-GKHQVLIFVHSRKETVKTARAIR-----DAALANDTLSRFLK 1916
R Q M Y +V A K ++FV +RK TA + D + D L L+
Sbjct: 1563 RMQAMTKPTYTAIVQHAKNKKPAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPDFLLGQLE 1622
Query: 1917 EDSVSREILQTESGHVRSNDLKDLLPYGFAIHNAGMARTDRELVEILFGQGDVQVLVFTA 2096
E L +R LK+ L +G + G++ D+E+V LF G +Q V ++
Sbjct: 1623 E-------LDPFVSQIREETLKETLRHGIGYLHEGLSSLDQEIVTQLFEAGRIQACVMSS 1675
Query: 2097 TLAWGVNLLAHTVIIKGTQIYNPEKGAWTELSPLDVTQMLGRAGRPQYDTSWEGIIITGH 2276
+L WG L AH V++ GTQ Y+ + + ++ D+ QM+GRA RP D + + +I
Sbjct: 1676 SLCWGTPLTAHLVVVMGTQYYDGRENSHSDYPVPDLLQMMGRASRPLLDNAGKCVIFCHA 1735
Query: 2277 SEXXXXXXXMNNQLPIESQFVSKLAD 2354
+ + P+ESQ L D
Sbjct: 1736 PQKEYYKKFLYEAFPVESQLQHFLHD 1761
Score = 62.0 bits (149), Expect(2) = 1e-12
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +3
Query: 1053 GRPQHDTSRERIIITGHSEL*YYLLSMNNQLPVRSQFVLKWLAXXXXXXXXXXXXXXRRT 1232
GRPQ+D E IIITG+SEL YYL MN QLP+ SQF+ K LA R
Sbjct: 881 GRPQYDRHGEGIIITGYSELQYYLSLMNEQLPIESQFISK-LADQLNAEIVLGTVQNARE 939
Query: 1233 QLALAIHT*YLHVCMGRNPTFFGL 1304
+T YL++ M RNPT +GL
Sbjct: 940 ACHWLGYT-YLYIRMVRNPTLYGL 962
Score = 41.6 bits (96), Expect(2) = 1e-12
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +1
Query: 898 ESKDLLLYGL-IHRDGMARTDHCLVGELLDEGHIQVLVFTATLGY 1029
E K++L YG IH G+ R D +V L +GH+QVLV TATL +
Sbjct: 797 ELKNILPYGFAIHHAGLTRGDREIVENLFAQGHVQVLVSTATLAW 841