BLASTX nr result

ID: Papaver27_contig00008196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00008196
         (667 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Popu...    60   6e-07
ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Popu...    60   6e-07

>ref|XP_006368650.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|550346724|gb|ERP65219.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
          Length = 420

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
 Frame = -3

Query: 581 QVLGPVNGLVCFVDWGAFAVRLYNVSTREVAPWIQSTLLKEERDLFQKDGTFIKNIRGPF 402
           +V+G  NGL+  ++   F++ LYN STRE    I  + L+   DL     + + N    F
Sbjct: 92  EVMGSCNGLLALLN-SDFSIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFN----F 145

Query: 401 FQFGFDPLATEHKLFCFWTLSRIQTLLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHED 222
           + FG DP+  ++K+       R     G + +   +   +  ++ +   W+RID  P++ 
Sbjct: 146 YGFGHDPINEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD- 197

Query: 221 NQEKLNVVIPPFLN---RKSF-VYANGSIYWINKRMSTSDDSVHCTKDKHSKDGSNGDPD 54
               L  ++PP  +   R+ + V+AN +++W               K      G     D
Sbjct: 198 ----LRFILPPDYHPRCRRGYGVFANSAVHW---------------KATVVGKGKENGSD 238

Query: 53  VIVAFDVGSEKFRVIP 6
           +IVAFD+G+E+F++IP
Sbjct: 239 LIVAFDLGAEEFKIIP 254


>ref|XP_002297705.1| hypothetical protein POPTR_0001s07280g [Populus trichocarpa]
           gi|566147699|ref|XP_006368651.1| S haplotype-specific
           F-box protein 1 [Populus trichocarpa]
           gi|222844963|gb|EEE82510.1| hypothetical protein
           POPTR_0001s07280g [Populus trichocarpa]
           gi|550346725|gb|ERP65220.1| S haplotype-specific F-box
           protein 1 [Populus trichocarpa]
          Length = 408

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
 Frame = -3

Query: 581 QVLGPVNGLVCFVDWGAFAVRLYNVSTREVAPWIQSTLLKEERDLFQKDGTFIKNIRGPF 402
           +V+G  NGL+  ++   F++ LYN STRE    I  + L+   DL     + + N    F
Sbjct: 92  EVMGSCNGLLALLN-SDFSIALYNPSTRE-KKMIPVSPLELPNDLDDSKVSSLFN----F 145

Query: 401 FQFGFDPLATEHKLFCFWTLSRIQTLLGRAIESHNYVSWEALTIGRDTKWRRIDVVPHED 222
           + FG DP+  ++K+       R     G + +   +   +  ++ +   W+RID  P++ 
Sbjct: 146 YGFGHDPINEDYKVV------RFIHFYGDSPDGFFHCEVKVYSL-KSNSWKRIDDYPYD- 197

Query: 221 NQEKLNVVIPPFLN---RKSF-VYANGSIYWINKRMSTSDDSVHCTKDKHSKDGSNGDPD 54
               L  ++PP  +   R+ + V+AN +++W               K      G     D
Sbjct: 198 ----LRFILPPDYHPRCRRGYGVFANSAVHW---------------KATVVGKGKENGSD 238

Query: 53  VIVAFDVGSEKFRVIP 6
           +IVAFD+G+E+F++IP
Sbjct: 239 LIVAFDLGAEEFKIIP 254


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