BLASTX nr result
ID: Papaver27_contig00007757
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00007757
(377 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I... 207 1e-51
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ... 207 2e-51
gb|ABK26380.1| unknown [Picea sitchensis] 203 2e-50
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s... 202 3e-50
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi... 202 3e-50
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ... 202 4e-50
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 201 1e-49
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 198 7e-49
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 196 4e-48
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ... 195 6e-48
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I... 195 6e-48
gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus... 194 8e-48
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S... 192 4e-47
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun... 191 9e-47
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S... 191 9e-47
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac... 191 1e-46
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I... 189 3e-46
ref|XP_006376377.1| hypothetical protein POPTR_0013s12480g [Popu... 188 8e-46
emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera] 188 8e-46
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 187 1e-45
>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like isoform 1 [Solanum lycopersicum]
gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3-like
isoform 2 [Solanum lycopersicum]
Length = 145
Score = 207 bits (527), Expect = 1e-51
Identities = 101/125 (80%), Positives = 111/125 (88%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV DPDGKKFD+V+RIEARSEQFDMFM LDVNTE+YP+R DKF MVLASTL+
Sbjct: 6 FEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVLASTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGYF QG +KSLADKFEYVMHGKLYRI EEGSG +VKA+I+ SFGGLLM L+GD
Sbjct: 66 LDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGD 125
Query: 17 PSNAA 3
PS AA
Sbjct: 126 PSIAA 130
>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Solanum tuberosum]
Length = 145
Score = 207 bits (526), Expect = 2e-51
Identities = 100/125 (80%), Positives = 111/125 (88%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV DPDGKKFD+V+RIEARSEQFDMFM LD+NTE+YP+R DKF MVLASTL+
Sbjct: 6 FEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVLASTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGYF QG +KSLADKFEYVMHGKLYRI EEGSG +VKA+I+ SFGGLLM L+GD
Sbjct: 66 LDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLMQLRGD 125
Query: 17 PSNAA 3
PS AA
Sbjct: 126 PSIAA 130
>gb|ABK26380.1| unknown [Picea sitchensis]
Length = 145
Score = 203 bits (516), Expect = 2e-50
Identities = 98/124 (79%), Positives = 108/124 (87%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV +DPDGKKFDKVSRIEARSEQFDM+M LDVN +VYP+ G+KF + LA TL+
Sbjct: 6 FEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVALAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPD GYF QGGRKSLADK+EYVM+GKLY + EEGSG NVK EI ASFGGLLMLLKGD
Sbjct: 66 LDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLMLLKGD 125
Query: 17 PSNA 6
PSNA
Sbjct: 126 PSNA 129
>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
sativa Japonica Group]
Length = 396
Score = 202 bits (515), Expect = 3e-50
Identities = 98/126 (77%), Positives = 112/126 (88%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GD+FTMVLA TL+
Sbjct: 256 FEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLN 315
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEE-GSGINVKAEIYASFGGLLMLLKG 21
LDGTPDTG++TQ GRK+LADKF+YVMHGKLY+I E+ SG K EIYASFGGLLM+LKG
Sbjct: 316 LDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKG 375
Query: 20 DPSNAA 3
DPS+AA
Sbjct: 376 DPSSAA 381
>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
gi|125598367|gb|EAZ38147.1| hypothetical protein
OsJ_22498 [Oryza sativa Japonica Group]
Length = 191
Score = 202 bits (515), Expect = 3e-50
Identities = 98/126 (77%), Positives = 112/126 (88%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GD+FTMVLA TL+
Sbjct: 51 FEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMVLAPTLN 110
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEE-GSGINVKAEIYASFGGLLMLLKG 21
LDGTPDTG++TQ GRK+LADKF+YVMHGKLY+I E+ SG K EIYASFGGLLM+LKG
Sbjct: 111 LDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGLLMMLKG 170
Query: 20 DPSNAA 3
DPS+AA
Sbjct: 171 DPSSAA 176
>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like isoform X1 [Oryza brachyantha]
gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X2
[Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X3 [Oryza brachyantha]
gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like isoform X4
[Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
PREDICTED: DNA-directed RNA polymerases II, IV and V
subunit 8B-like isoform X5 [Oryza brachyantha]
Length = 146
Score = 202 bits (514), Expect = 4e-50
Identities = 98/126 (77%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GDKFTMVLA TL+
Sbjct: 6 FEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVLAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLLMLLKG 21
LDGTPD G++TQ GRK+LADK++YVMHGKLY+I E+GSG K EIYASFGGLLM+LKG
Sbjct: 66 LDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLLMMLKG 125
Query: 20 DPSNAA 3
DPS AA
Sbjct: 126 DPSTAA 131
>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3 isoform 1 [Vitis vinifera]
gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit rpabc3 isoform 2
[Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
protein product [Vitis vinifera]
Length = 145
Score = 201 bits (510), Expect = 1e-49
Identities = 96/125 (76%), Positives = 106/125 (84%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
F DIF V +DPDGKKFDKVSRIEA+SEQ DM+M LDVNTE+YP+ G+KF M LASTL
Sbjct: 6 FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+TQ GRKSLADKFEYVMHGKLY+I EEGSG NVK IY SFGGLLM+L GD
Sbjct: 66 LDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGD 125
Query: 17 PSNAA 3
P+N A
Sbjct: 126 PANTA 130
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 198 bits (503), Expect = 7e-49
Identities = 92/125 (73%), Positives = 109/125 (87%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V+ +DPDGKKFDKVSRIEA S+ DMFMHLDVNTE+YP+ GDKFTM LA TL+
Sbjct: 7 FEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHTLN 66
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+TQG RK+LADK+EY+M+GKLY+I EEGSG VKAE+ S+GGLLMLL+GD
Sbjct: 67 LDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLRGD 126
Query: 17 PSNAA 3
PS+ +
Sbjct: 127 PSHVS 131
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
Length = 146
Score = 196 bits (497), Expect = 4e-48
Identities = 90/122 (73%), Positives = 108/122 (88%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V +DPDGKKFDKVSRIEA S+ DM+M LDVN+E+YP+R GDKFTM LA TL+
Sbjct: 7 FEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLN 66
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+T G RK+LADK+EY+MHGKL++IG+EGSG ++KAEIY S+GGLLM+LKGD
Sbjct: 67 LDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGD 126
Query: 17 PS 12
PS
Sbjct: 127 PS 128
>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Oryza brachyantha]
Length = 147
Score = 195 bits (495), Expect = 6e-48
Identities = 94/127 (74%), Positives = 110/127 (86%), Gaps = 2/127 (1%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIFTV +DPDGKKFD+VSRIEAR+EQ +++M LDV T+VYP+ GDKFTMVL TL+
Sbjct: 6 FEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVLVPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGE--EGSGINVKAEIYASFGGLLMLLK 24
LDGTPDTG+FTQ GRK+LADK+EYVMHGKLY+I E E SG N K E+YASFGGLLM+LK
Sbjct: 66 LDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGLLMMLK 125
Query: 23 GDPSNAA 3
GDPS+AA
Sbjct: 126 GDPSSAA 132
>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 146
Score = 195 bits (495), Expect = 6e-48
Identities = 95/126 (75%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF VN +DPDGKKFD+V+RIEARSEQF M+M LDV T VYP+ GDKFTMVLA TL+
Sbjct: 6 FEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVLAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLLMLLKG 21
LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ SG K E YASFGGLLMLLKG
Sbjct: 66 LDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLLMLLKG 125
Query: 20 DPSNAA 3
DPS+AA
Sbjct: 126 DPSSAA 131
>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
Length = 145
Score = 194 bits (494), Expect = 8e-48
Identities = 94/125 (75%), Positives = 106/125 (84%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V+ +DPDGKKFD+VSRI ARSEQFDM M LD+NTE+YP+RTGDKF MVLASTL+
Sbjct: 6 FEDIFRVDELDPDGKKFDRVSRISARSEQFDMLMFLDINTEIYPMRTGDKFMMVLASTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPD+GYF G +KSLADKF+YVM GKLYRI EE VKA+I+ SFGGLLM LKGD
Sbjct: 66 LDGTPDSGYFAPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIFVSFGGLLMQLKGD 125
Query: 17 PSNAA 3
PS AA
Sbjct: 126 PSIAA 130
>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
gi|241919960|gb|EER93104.1| hypothetical protein
SORBIDRAFT_01g001330 [Sorghum bicolor]
Length = 145
Score = 192 bits (488), Expect = 4e-47
Identities = 92/125 (73%), Positives = 105/125 (84%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FED F V+ +DPDGKKFDKVSR+EARSEQ M+M LDV T+VYPLR G+KF MVLA TL+
Sbjct: 6 FEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVLAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+TQ GRK+LAD +EYVM GKLY+I E+ S N K EIYASFGGLLMLL+GD
Sbjct: 66 LDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGD 125
Query: 17 PSNAA 3
PS AA
Sbjct: 126 PSTAA 130
>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
[Aegilops tauschii]
Length = 220
Score = 191 bits (485), Expect = 9e-47
Identities = 92/128 (71%), Positives = 109/128 (85%), Gaps = 3/128 (2%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V +DPDGKKFD+V+RIEARSEQ +M+M LD+ T+VYP+ GDKFTMVLA TL+
Sbjct: 6 FEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVLAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN---VKAEIYASFGGLLMLL 27
LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ S + K EIYASFGGLLMLL
Sbjct: 66 LDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGGLLMLL 125
Query: 26 KGDPSNAA 3
KGDPS+AA
Sbjct: 126 KGDPSSAA 133
>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
gi|241917379|gb|EER90523.1| hypothetical protein
SORBIDRAFT_01g001420 [Sorghum bicolor]
Length = 145
Score = 191 bits (485), Expect = 9e-47
Identities = 90/125 (72%), Positives = 105/125 (84%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FED F VN +DPDGKKFD+VSR+EARSEQ M+M LDV T+VYP++ +KF MVLA TL+
Sbjct: 6 FEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVLAPTLN 65
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+TQ GRK+LAD +EYVMHGKLY+I E+ S N K EIYASFGGLLMLL+GD
Sbjct: 66 LDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLMLLRGD 125
Query: 17 PSNAA 3
PS AA
Sbjct: 126 PSTAA 130
>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
1 [Theobroma cacao]
Length = 145
Score = 191 bits (484), Expect = 1e-46
Identities = 88/125 (70%), Positives = 109/125 (87%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V+ +DPDGKKFDKV+RIEARS+ DMFMHLDVN+E+YP+ GDKFTM LA TL+
Sbjct: 7 FEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHTLN 66
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+T GRKSLADK+EYVMHGKLY++ ++GSG +KAEIY S+GGLLM+L+G+
Sbjct: 67 LDGTPDTGYYTP-GRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLRGE 125
Query: 17 PSNAA 3
S+ +
Sbjct: 126 ASHVS 130
>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
rpabc3-like [Brachypodium distachyon]
Length = 144
Score = 189 bits (481), Expect = 3e-46
Identities = 94/126 (74%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V+ +DPDGKKFD+V+RIEARSEQ M+M LDV T+VYP+ GDKFTMVLA TL+
Sbjct: 6 FEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVLAPTLN 63
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLLMLLKG 21
LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ SG K EIYASFGGLLMLLKG
Sbjct: 64 LDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLLMLLKG 123
Query: 20 DPSNAA 3
DPS+AA
Sbjct: 124 DPSSAA 129
>ref|XP_006376377.1| hypothetical protein POPTR_0013s12480g [Populus trichocarpa]
gi|566200925|ref|XP_006376378.1| RNA polymerase subunit
family protein [Populus trichocarpa]
gi|550325653|gb|ERP54174.1| hypothetical protein
POPTR_0013s12480g [Populus trichocarpa]
gi|550325654|gb|ERP54175.1| RNA polymerase subunit
family protein [Populus trichocarpa]
Length = 148
Score = 188 bits (477), Expect = 8e-46
Identities = 89/122 (72%), Positives = 103/122 (84%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF V+ +DPDGKKFD V+RIEA S+ DMFMHLDVNT+VYP+ DKFTM LA TL+
Sbjct: 9 FEDIFVVDKLDPDGKKFDNVTRIEAHSQNCDMFMHLDVNTDVYPMFVNDKFTMALAHTLN 68
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGY+TQGGRK+LADK+EYVMHGKLY+I EEGS + E+ +FGGLLMLLKGD
Sbjct: 69 LDGTPDTGYYTQGGRKTLADKYEYVMHGKLYQIQEEGSRRATRTEMVITFGGLLMLLKGD 128
Query: 17 PS 12
PS
Sbjct: 129 PS 130
>emb|CAN73856.1| hypothetical protein VITISV_036454 [Vitis vinifera]
Length = 305
Score = 188 bits (477), Expect = 8e-46
Identities = 96/147 (65%), Positives = 106/147 (72%), Gaps = 22/147 (14%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
F DIF V +DPDGKKFDKVSRIEA+SEQ DM+M LDVNTE+YP+ G+KF M LASTL
Sbjct: 6 FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65
Query: 197 LDGTPDTGYFTQ----------------------GGRKSLADKFEYVMHGKLYRIGEEGS 84
LDGTPDTGY+TQ GRKSLADKFEYVMHGKLY+I EEGS
Sbjct: 66 LDGTPDTGYYTQVKCCGMVVXLARTKRITAAVRVAGRKSLADKFEYVMHGKLYKISEEGS 125
Query: 83 GINVKAEIYASFGGLLMLLKGDPSNAA 3
G NVK IY SFGGLLM+L GDP+N A
Sbjct: 126 GPNVKGVIYVSFGGLLMMLSGDPANTA 152
Score = 145 bits (365), Expect = 7e-33
Identities = 71/110 (64%), Positives = 83/110 (75%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
F+DIF V+ DP GKKFDKVSRIEA SEQ+DMFM LDVN E YP++ G+KF MVLA TL
Sbjct: 194 FDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVLAPTLH 253
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASF 48
LDG T YFTQG KSLADKF+YVM+G +Y++ EGSG +VK I F
Sbjct: 254 LDGADVTDYFTQGEXKSLADKFDYVMYGIIYKVSNEGSGPDVKGYISILF 303
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 187 bits (476), Expect = 1e-45
Identities = 87/123 (70%), Positives = 103/123 (83%)
Frame = -1
Query: 377 FEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLASTLS 198
FEDIF VN +DPDGKKFDKV+R+EA S +MFMHLDVNTEVYP+ GDKFT+ +A TL+
Sbjct: 8 FEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAMAPTLN 67
Query: 197 LDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLKGD 18
LDGTPDTGYFT G +K+LADK+EY+MHGKLY+I E G KAE+Y SFGGLLMLLKGD
Sbjct: 68 LDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKISER-DGKTPKAELYVSFGGLLMLLKGD 126
Query: 17 PSN 9
P++
Sbjct: 127 PAH 129