BLASTX nr result
ID: Papaver27_contig00006531
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00006531
(864 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355... 100 1e-18
gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-... 97 8e-18
gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subc... 96 1e-17
ref|XP_003598857.1| GRAS family transcription factor [Medicago t... 96 1e-17
emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group] 95 3e-17
emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indi... 95 3e-17
ref|XP_004300999.1| PREDICTED: uncharacterized protein LOC101305... 94 5e-17
ref|XP_004289393.1| PREDICTED: uncharacterized protein LOC101308... 94 5e-17
gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 5e-17
emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group] gi... 94 5e-17
gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subc... 94 5e-17
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group... 94 5e-17
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 94 7e-17
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group] 94 7e-17
gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 9e-17
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 9e-17
gb|ABA93973.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 9e-17
gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 9e-17
gb|AAS07216.1| putative retrotransposon gag protein [Oryza sativ... 94 9e-17
gb|AAP21433.1| putative polyprotein [Oryza sativa Japonica Group... 94 9e-17
>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
Pol polyprotein [Medicago truncatula]
Length = 745
Score = 99.8 bits (247), Expect = 1e-18
Identities = 61/173 (35%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Frame = +2
Query: 197 LLEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWW- 373
+LE F++ PP F+G DP W ++I++IF M+CT Q+ + QL+ EA WW
Sbjct: 36 MLETFMKKNPPTFKGRCDPDGAQTWLKEIERIFRVMQCTEDQKVRFGTHQLAEEADDWWV 95
Query: 374 -MNSTMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISL 550
+ T+G + + +A F F RYFP VR KK EF +L+Q M V +Y +++ L
Sbjct: 96 ALLPTLGQEGAVVTWAVFRREFLRRYFPEDVRGKKEIEFLELKQGN-MSVTEYAAKFVEL 154
Query: 551 QRFGYFLTPNEDTSAR--KFENGLGVHIRGRVISHYFPAFQQVVDSARAREAD 703
+F T +R KFENGL I+ + FQ +V+S R E D
Sbjct: 155 SKFYPHYTAENAEFSRCIKFENGLRPDIKRAIGYQQLRVFQDLVNSCRIYEED 207
>gb|AAX96624.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza
sativa Japonica Group] gi|77550173|gb|ABA92970.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1509
Score = 97.1 bits (240), Expect = 8e-18
Identities = 54/189 (28%), Positives = 99/189 (52%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 261 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 320
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+L +A+ +F F A + P + + K +EF L+Q +++YL ++ L R
Sbjct: 321 YCNAHPELTNIAWDEFAMAFRAAHVPESTIDMKKEEFNRLKQGNNS-INEYLSQFNKLAR 379
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ ++ RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 380 YAPKEVDTDNKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKESAEEYKK 438
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 439 RKSNHQGNS 447
>gb|ABA94797.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1784
Score = 96.3 bits (238), Expect = 1e-17
Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 417 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 476
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ N +A+ +F F A + P + + K +EF L+Q V++YL ++ L R
Sbjct: 477 YCNAHPEPNNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNS-VNEYLSQFNKLAR 535
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 536 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 594
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 595 RKSNHQGNS 603
>ref|XP_003598857.1| GRAS family transcription factor [Medicago truncatula]
gi|355487905|gb|AES69108.1| GRAS family transcription
factor [Medicago truncatula]
Length = 351
Score = 96.3 bits (238), Expect = 1e-17
Identities = 60/173 (34%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
Frame = +2
Query: 197 LLEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWW- 373
+LE F++ PP F+G DP W ++I++IF M+CT Q+ + QL+ EA WW
Sbjct: 36 MLETFMKKNPPAFKGRYDPDGAQTWLKEIERIFRVMQCTEDQKVRFGTHQLADEADDWWV 95
Query: 374 -MNSTMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISL 550
+ T+G + + A F F RYFP VR KK EF +L+Q M V +Y +++ L
Sbjct: 96 ALLPTLGQEGAVVTLAVFRREFLRRYFPEDVRGKKEIEFLELKQGN-MSVTEYAAKFVEL 154
Query: 551 QRFGYFLTPNEDTSAR--KFENGLGVHIRGRVISHYFPAFQQVVDSARAREAD 703
+F T +R KFENGL I+ + F +V+S R E D
Sbjct: 155 SKFYPHYTAENAEFSRCIKFENGLRPDIKRAIGYQQLRVFPDLVNSCRIYEED 207
>emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 95.1 bits (235), Expect = 3e-17
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 414 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWWEN 473
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL ++ L R
Sbjct: 474 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNS-VNEYLSQFNKLAR 532
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + +R
Sbjct: 533 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYRK 591
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 592 RKSNHQGNS 600
>emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 95.1 bits (235), Expect = 3e-17
Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 414 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNIVQCTPVEKTLYASHQLRGPAADWWEN 473
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL ++ L R
Sbjct: 474 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNNS-VNEYLSQFNKLAR 532
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + +R
Sbjct: 533 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYRK 591
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 592 RKSNHQGNS 600
>ref|XP_004300999.1| PREDICTED: uncharacterized protein LOC101305853 [Fragaria vesca
subsp. vesca]
Length = 327
Score = 94.4 bits (233), Expect = 5e-17
Identities = 59/169 (34%), Positives = 84/169 (49%)
Frame = +2
Query: 197 LLEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWM 376
L + +RL P F G +D LV D W E ++ F + CT +++ +++ F L EAR WW
Sbjct: 62 LAQGIIRLGAPSFLGGTDFLVADHWIEGMETYFTLITCTEIEKMRIATFLLKDEARVWWN 121
Query: 377 NSTMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
D+ L++ F + F +YFP TVR + EF L Q M V DY R+ L R
Sbjct: 122 GVERARDVTALSWEGFVQLFREKYFPDTVREQLELEFIALVQ-GLMSVRDYKARFSQLYR 180
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREAD 703
F + + RKF GL +R V SH F + V+SA A E +
Sbjct: 181 FAREM--DAVALPRKFIRGLRHKLRNVVSSHRFATLAEAVESALAVEQE 227
>ref|XP_004289393.1| PREDICTED: uncharacterized protein LOC101308717 [Fragaria vesca
subsp. vesca]
Length = 344
Score = 94.4 bits (233), Expect = 5e-17
Identities = 60/169 (35%), Positives = 85/169 (50%)
Frame = +2
Query: 197 LLEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWM 376
L + +RL P F G +D LV D W EDI+ F + CT +++ +++ F L EAR WW
Sbjct: 56 LAQGIIRLGVPSFLGGTDYLVADHWIEDIETYFTMITCTEIEKMRIATFLLKDEARAWWS 115
Query: 377 NSTMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
D+ L + F + F +YFP TVR + EF L Q M V DY R+ L R
Sbjct: 116 GVERSQDVTALPWEGFVQLFREKYFPDTVREQLELEFIALVQ-GMMSVRDYEARFSQLYR 174
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREAD 703
F + + A+KF GL + V SH F ++V+SA A E +
Sbjct: 175 FAREMDAVD--LAQKFIWGLRHELWKLVTSHRFATLAKMVESALAVEQE 221
>gb|ABA95101.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1651
Score = 94.4 bits (233), Expect = 5e-17
Identities = 52/163 (31%), Positives = 87/163 (53%), Gaps = 1/163 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R PP+F + +P+ D W +D+++ ++CTPV++ + QL G A WW N
Sbjct: 437 LTDFLRSHPPEFSHTVEPVEADDWLKDVERKLNLVQCTPVEKTLFAAHQLRGSAADWWEN 496
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
D + +A+F + F A + P + + K +EF L+Q V++YL R+ L R
Sbjct: 497 YCNAHPDAVNIEWAEFADAFRAAHVPESTIDMKKEEFNRLKQGTGS-VNEYLSRFNKLAR 555
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSA 685
+ + RKF G+ V +R ++I+H FP FQ +V+ A
Sbjct: 556 YAPEEVDFDKKKIRKFLKGIAVGLRIQLIAHDFPTFQHMVNKA 598
>emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group]
gi|38347324|emb|CAE05974.2| OSJNBa0063C18.15 [Oryza
sativa Japonica Group]
Length = 1764
Score = 94.4 bits (233), Expect = 5e-17
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 418 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 477
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ ++A+ +F F A + P + + K +EF L+Q V++YL + L R
Sbjct: 478 YCNAHPEPTSIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSMFNKLAR 536
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ ++ RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 537 YAPEEVDSDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 595
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 596 RKSNHQGNS 604
>gb|ABA97418.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1807
Score = 94.4 bits (233), Expect = 5e-17
Identities = 53/189 (28%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 418 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 477
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q +++YL ++ L R
Sbjct: 478 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-INEYLSQFNKLAR 536
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ ++++A E D + ++
Sbjct: 537 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINNALLLE-DARKEATEEYKK 595
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 596 RKSNHQGNS 604
>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1649
Score = 94.4 bits (233), Expect = 5e-17
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 286 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 345
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL ++ L R
Sbjct: 346 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSQFNKLAR 404
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 405 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 463
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 464 RKSNHQGNS 472
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 94.0 bits (232), Expect = 7e-17
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 444 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 503
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q +++YL ++ L R
Sbjct: 504 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-INEYLSQFNKLAR 562
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 563 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 621
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 622 RKSNHQGNS 630
>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
Length = 1762
Score = 94.0 bits (232), Expect = 7e-17
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 419 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 478
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q +++YL ++ L R
Sbjct: 479 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-INEYLSQFNKLAR 537
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 538 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 596
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 597 RKSNHQGNS 605
>gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1824
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 435 LTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYTSHQLRGPAADWWEN 494
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL + L R
Sbjct: 495 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSMFNKLAR 553
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 554 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 612
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 613 RKSNHQGNS 621
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 418 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 477
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL ++ L R
Sbjct: 478 YCNAHPEPTNIAWDEFAAAFRAAHVPESTIDMKKEEFNRLKQGHSS-VNEYLSQFNKLAR 536
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 537 YAPEEVNTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 595
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 596 RKSNHQGNS 604
>gb|ABA93973.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 714
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 139 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 198
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL + L R
Sbjct: 199 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSMFNKLAR 257
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 258 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 316
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 317 RKSNHQGNS 325
>gb|AAP53894.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1829
Score = 93.6 bits (231), Expect = 9e-17
Identities = 53/189 (28%), Positives = 97/189 (51%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 418 LTDFLRSRPPEFSQTVEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAANWWEN 477
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K ++F L+Q V++YL + L R
Sbjct: 478 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEKFNRLKQGNSS-VNEYLSMFNKLAR 536
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ ++ RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 537 YALEEVDSDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 595
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 596 RKSNHQGNS 604
>gb|AAS07216.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
Length = 660
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 139 LTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 198
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL + L R
Sbjct: 199 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSMFNKLAR 257
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 258 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 316
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 317 RKSNHQGNS 325
>gb|AAP21433.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711644|gb|ABF99439.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1382
Score = 93.6 bits (231), Expect = 9e-17
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 1/189 (0%)
Frame = +2
Query: 200 LEKFVRLKPPQFEGSSDPLVVDKWKEDIDKIFVAMRCTPVQRKQLSVFQLSGEARKWWMN 379
L F+R +PP+F + +P+ D W +D+D+ ++CTPV++ + QL G A WW N
Sbjct: 139 LTDFLRSRPPEFSQTIEPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWEN 198
Query: 380 -STMGLDLNTLAYAQFCERFDARYFPATVRNKKIKEFADLEQVKPMLVDDYLDRYISLQR 556
+ +A+ +F F A + P + + K +EF L+Q V++YL + L R
Sbjct: 199 YCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSS-VNEYLSMFNKLAR 257
Query: 557 FGYFLTPNEDTSARKFENGLGVHIRGRVISHYFPAFQQVVDSARAREADWLRNKETNWRT 736
+ + RKF G+ V +R ++++H FP FQ +++ A E D + ++
Sbjct: 258 YAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLLE-DARKEATEEYKK 316
Query: 737 SSTARQGNN 763
+ QGN+
Sbjct: 317 RKSNHQGNS 325