BLASTX nr result
ID: Papaver27_contig00005771
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00005771
(1991 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007027540.1| Poly(A) binding protein 7 [Theobroma cacao] ... 49 2e-10
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr... 71 2e-09
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera] 65 1e-07
gb|EXB75946.1| putative polyadenylate-binding protein [Morus not... 34 1e-07
ref|XP_004302341.1| PREDICTED: FACT complex subunit SPT16-like [... 40 3e-06
gb|EXB67544.1| FACT complex subunit SPT16 [Morus notabilis] 40 8e-06
>ref|XP_007027540.1| Poly(A) binding protein 7 [Theobroma cacao]
gi|508716145|gb|EOY08042.1| Poly(A) binding protein 7
[Theobroma cacao]
Length = 637
Score = 48.9 bits (115), Expect(4) = 2e-10
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 4/44 (9%)
Frame = +1
Query: 1045 AGLAVPTSAAVIPARYPPLYYTVPPNMVPP----KGLMHQPLGL 1164
AGLA P S AV+P YPPLYYT P +V P G+M+QPLGL
Sbjct: 390 AGLAGP-STAVLPGGYPPLYYTASPGVVSPVPPRPGMMYQPLGL 432
Score = 31.2 bits (69), Expect(4) = 2e-10
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 1492 LLAAFPQHQEQMLGEYLYPLVFKLQANDSDILP 1590
L AA P+ Q+ +LGE LYPLV Q + D++P
Sbjct: 548 LAAASPEQQKTILGERLYPLV---QKHQPDLVP 577
Score = 29.3 bits (64), Expect(4) = 2e-10
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Frame = +3
Query: 1179 RTSKFLPPARPSFYVGARPM--AILEKMGENECGYGCSNRWSIGVIYATHSTSISRPAIS 1352
R + F PP RP+F + PM + + +N G ++ +
Sbjct: 437 RANAFTPPTRPAFQPSSLPMVPSATRQTRQNRARMNGHALLQGGSYSVPQLQQPAQSGTT 496
Query: 1353 VRDPNNQQN----KYIMEVQMGEMKNG----PHRLSSIAGPKSVRGLKTLSTKLAA 1496
++D +NQQ KY+ + E+ G P +S+A +G +TLS+ LAA
Sbjct: 497 LKDQSNQQRVGQAKYVPNGRGREVNRGSGVPPAASNSVAAVS--QGSETLSSMLAA 550
Score = 23.5 bits (49), Expect(4) = 2e-10
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 1673 KLTGMFLEMDN 1705
K+TGM LEMDN
Sbjct: 578 KITGMLLEMDN 588
>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
product [Vitis vinifera]
Length = 634
Score = 71.2 bits (173), Expect = 2e-09
Identities = 61/188 (32%), Positives = 88/188 (46%), Gaps = 15/188 (7%)
Frame = +1
Query: 1042 IAGLAVPTSAAVIPARYPPLYYTVPPNMVPPK-GLMHQPLGL-----IHLNEGPVNFCLL 1203
+AGLA P S VIP YPPLYYT PP ++PP+ GLM+QPLGL + P
Sbjct: 387 MAGLAGP-STPVIPGGYPPLYYTAPPGVIPPRQGLMYQPLGLRTGWRANNLIPPTRPAFQ 445
Query: 1204 LGQVSMLVPDPWQF*KKWGRMSADMVAQTGGQSVSFMPHI---------PHLSLGRRFQ* 1356
+ ++ P Q + GR + + Q GG S +FMPH+ P S+ ++
Sbjct: 446 PSSIPLMPNTPRQHRQNRGRTNGH-IPQGGGHSTAFMPHLQQPTQPVISPKDSINQQRAG 504
Query: 1357 EIQTISRTST*WKCRWAR*KMDHTDSHLLLVLNLFED*RH*APS*LLAAFPQHQEQMLGE 1536
+ + + + + K S + S L AA P+ Q+Q+LGE
Sbjct: 505 QAKYVPNGRS-----YEMSKGSGIPSAASNSVGTGSQGSEMLSSMLAAASPEQQKQILGE 559
Query: 1537 YLYPLVFK 1560
+LYPLV K
Sbjct: 560 HLYPLVQK 567
>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 65.1 bits (157), Expect = 1e-07
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 6/100 (6%)
Frame = +1
Query: 1042 IAGLAVPTSAAVIPARYPPLYYTVPPNMVPPK-GLMHQPLGL-----IHLNEGPVNFCLL 1203
+AGLA P S VIP YPPLYYT PP ++PP+ GLM+QPLGL + P
Sbjct: 407 MAGLAGP-STPVIPGGYPPLYYTAPPGVIPPRQGLMYQPLGLRTGWRANNLIPPTRPAFQ 465
Query: 1204 LGQVSMLVPDPWQF*KKWGRMSADMVAQTGGQSVSFMPHI 1323
+ ++ P Q + GR + + Q GG S +FMPH+
Sbjct: 466 PSPIPLMPNTPRQHRQNRGRTNGH-IPQGGGHSTAFMPHL 504
>gb|EXB75946.1| putative polyadenylate-binding protein [Morus notabilis]
Length = 628
Score = 33.9 bits (76), Expect(4) = 1e-07
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 7/116 (6%)
Frame = +3
Query: 1170 PE*RTSKFLPPARPSFYVGARPMAILEKMGENECGYGCSNRWSIGVIYATHSTSISRPAI 1349
P+ + F PP RP+F PM + NR + + + +PA
Sbjct: 433 PDWMANSFAPPTRPAFQPSPVPMPNAPRPNR-------QNRGRVNGHMLPNVQHLQQPAN 485
Query: 1350 SVRDPNNQ----QNKYIMEVQMGEMKNGPHRLSSIAGPK---SVRGLKTLSTKLAA 1496
+D N Q KYI + E+ GP +SS A G +TLS+ LAA
Sbjct: 486 FSKDSINHQRAGQTKYIPNGRQREINRGPSCVSSAASNSFGVGSPGPETLSSMLAA 541
Score = 33.1 bits (74), Expect(4) = 1e-07
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 1492 LLAAFPQHQEQMLGEYLYPLVFK 1560
L AA P HQ+ +LGE+LYPLV K
Sbjct: 539 LAAATPGHQKHILGEHLYPLVQK 561
Score = 30.8 bits (68), Expect(4) = 1e-07
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 1066 SAAVIPARYPPLYYTVP--PNMVPPKGLMHQPLGL 1164
S+ +IP Y P YY P++ P GLM+Q +G+
Sbjct: 397 SSPLIPGGYSPFYYPASSVPHVPPRPGLMYQSIGM 431
Score = 25.0 bits (53), Expect(4) = 1e-07
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 1670 AKLTGMFLEMDN 1705
AK+TGM LEMDN
Sbjct: 568 AKITGMLLEMDN 579
>ref|XP_004302341.1| PREDICTED: FACT complex subunit SPT16-like [Fragaria vesca subsp.
vesca]
Length = 1065
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 122 KYYENKQGFPDWGSKLEEIRANPKEFIYKGGWKFLNVEGS 241
KYYE++ W L+ I +P+ F+ GGW+FLN+EG+
Sbjct: 918 KYYESRMNL-SWKPILKTITEDPQSFLDNGGWEFLNLEGT 956
Score = 39.7 bits (91), Expect(2) = 3e-06
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +1
Query: 10 FNMTIVFKNFELDVLQINSIPSAKRISIKESLNLARVK 123
F+M IVFK+F+ DVL+I+SIPS IKE L+ +K
Sbjct: 881 FDMAIVFKDFKKDVLRIDSIPSTSLEGIKEWLDDTEIK 918
>gb|EXB67544.1| FACT complex subunit SPT16 [Morus notabilis]
Length = 1067
Score = 40.0 bits (92), Expect(2) = 8e-06
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 10 FNMTIVFKNFELDVLQINSIPSAKRISIKESLNLARVK 123
F+MTIVFK+F+ DVL+I+SIPS I+E L+ +K
Sbjct: 884 FDMTIVFKDFKRDVLRIDSIPSTALDGIEEWLDTTDIK 921
Score = 38.5 bits (88), Expect(2) = 8e-06
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 122 KYYENKQGFPDWGSKLEEIRANPKEFIYKGGWKFLNVEGS 241
KYYE++ +W L+ I +P+ FI GGW+FLN+E +
Sbjct: 921 KYYESRLNL-NWRQILKAITDDPQSFIEDGGWEFLNLEAT 959