BLASTX nr result

ID: Papaver27_contig00004237 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00004237
         (4074 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291...   147   1e-52
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo...   158   2e-50
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   177   3e-41
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             175   2e-40
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   174   2e-40
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   173   7e-40
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   169   8e-39
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A...   168   2e-38
emb|CAB75484.1| putative protein [Arabidopsis thaliana]               167   4e-38
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   166   8e-38
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   165   1e-37
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   164   2e-37
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   164   3e-37
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   164   3e-37
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   164   4e-37
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   164   4e-37
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   164   4e-37
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   163   5e-37
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   163   5e-37
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun...   162   9e-37

>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
            subsp. vesca]
          Length = 948

 Score =  147 bits (372), Expect(2) = 1e-52
 Identities = 82/255 (32%), Positives = 127/255 (49%)
 Frame = +3

Query: 3297 FYCLDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLS 3476
            F  ++W F+E  L++ GF   + N V+ C++SVS+SI  NG    +  P+RGLRQGDPLS
Sbjct: 234  FSQVEWDFLEAALLQFGFARPWVNLVLACVSSVSFSIVLNGKPGRYFSPSRGLRQGDPLS 293

Query: 3477 PYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQ 3656
            PY+F++  E LS  L     +  L  I++ +  P++ HL +ADD L    A   +   L 
Sbjct: 294  PYLFLIVSEALSLRLTKAVNEKHLLGIKLCRGCPTLSHLFFADDALFFVKATLSNVSKLA 353

Query: 3657 QLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRS 3836
             +  +Y  +  Q I++ KSSI   P    ++A+ +           P  YLG+    GR 
Sbjct: 354  AIFEEYCRASGQVISREKSSIFFSPNTPAQMARLMCELMGFVEVENPGKYLGLPTIWGRL 413

Query: 3837 SAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDK 4016
                +  +  RI RK  GW  K ++ AG+  LIK+      +  M    LP  + N+I+ 
Sbjct: 414  KKDALSYITERINRKLDGWKEKNLSWAGKETLIKSVAMVIPSFPMSCFLLPKYLGNQINS 473

Query: 4017 ITRDFFWGHDAQTRK 4061
               +F+WG      K
Sbjct: 474  AISNFWWGKSESINK 488



 Score = 89.7 bits (221), Expect(2) = 1e-52
 Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
 Frame = +1

Query: 2617 GGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNL 2796
            GG     N+   L ++I +  L D+GF G  +TW+  +    ++ ERLDR+L ++ WL  
Sbjct: 9    GGAQWNPNRHQFLSDLIVSCNLFDIGFAGQQFTWARKEGNTIILQERLDRALIDENWLLK 68

Query: 2797 HPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSP 2976
             P   + HL R+ SDH P++L    +       F+ E      P+   IV + W    + 
Sbjct: 69   WPETNLSHLTRLGSDHTPIVLSTDNVSRKGIPLFRFESYWAEEPESSRIVEECWLGVTNG 128

Query: 2977 TRPANLNMKLNDIATALLQWKKSTF-GNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLE 3153
               +  N  LN    +L  W +S F  +L   I+A  E +   Q +       E F   +
Sbjct: 129  RPISTWNSNLNRCKKSLKSWSRSKFPKSLKVKIKACIEELDDLQVL-------EPFSSSD 181

Query: 3154 HEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNTIAY*STQNLLVFSIASTGVS 3321
             + +       L    E +W QRSRV+WL+ G    +    ++  L  +I+S G S
Sbjct: 182  KQVELSSKLSELWIKEEKFWHQRSRVKWLKSGVFGFLERIGSEKSL--NISSKGFS 235


>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
          Length = 1170

 Score =  158 bits (399), Expect(2) = 2e-50
 Identities = 80/272 (29%), Positives = 147/272 (54%)
 Frame = +3

Query: 3246 RGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVA 3425
            R  Q+ C L      +F + +DW F++  + +MGF  K+++++M C+TSV Y++ FNG  
Sbjct: 430  RENQNFCALKLDLSKAFDH-VDWQFLDGVMERMGFCDKWRSWIMACVTSVQYNVRFNGHL 488

Query: 3426 HAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYAD 3605
                 PTRGLRQGDPLSPY+F+L  + LS+ +   E + +++ +++ + AP I HL++AD
Sbjct: 489  LEPFSPTRGLRQGDPLSPYLFLLVADGLSNIIKSNESEGLIQPLKVCRRAPGISHLLFAD 548

Query: 3606 DLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPT 3785
            D L+   AD +    ++ +L  Y +S  Q IN  K S++       +  + ++    +  
Sbjct: 549  DSLLFFKADTEQASRIRDVLQMYESSTGQLINPSKCSMLFSDFCPQQHQEDIKRILGVTN 608

Query: 3786 TSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNH 3965
            +S    YLG+    GR  A     + +R+ ++   W  K ++   + VLIK+       +
Sbjct: 609  SSFEEKYLGLPTPEGRMKAGQFQPIKDRLSKRMSDWNEKYMSSGAKDVLIKSVAQALPTY 668

Query: 3966 VMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
             M   ++  +   ++ ++ R+F+WGH+   +K
Sbjct: 669  TMGIFKMTDKFCEEVSQMIRNFWWGHEKGEKK 700



 Score = 71.6 bits (174), Expect(2) = 2e-50
 Identities = 47/207 (22%), Positives = 90/207 (43%)
 Frame = +1

Query: 2641 QGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHH 2820
            Q    + V+++  L DLGFHG P+T+ N Q G        DR++  ++ +    + T+ +
Sbjct: 248  QMREFRSVLSDCDLHDLGFHGIPWTYDNMQRG--------DRNVRKEEHIRYQRQQTMRY 299

Query: 2821 LPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNM 3000
                                        E +      +  ++  +W    + T   +++ 
Sbjct: 300  ----------------------------EEVWERESSLPEVIQSAWSDGNAITNLGDISA 331

Query: 3001 KLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAH 3180
            K+ +    L +W K   GN+   I A+ + + + +SM S  S  ++       +Q ++  
Sbjct: 332  KMKNTMCKLSRWSKEKIGNVRKKIAALRDKLRECRSMGSLDSDVQV-------RQIKKEL 384

Query: 3181 QMLMQCNETYWKQRSRVQWLQEGELNT 3261
            + L+   E +WKQRSR+ WL+EG+ NT
Sbjct: 385  EELLHREEIWWKQRSRIMWLKEGDRNT 411



 Score = 60.8 bits (146), Expect(2) = 2e-06
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
 Frame = +3

Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHV-YIEPVNNSQPWLFTGIYGP 2495
            +G   C A++  G  GG+ L W  +  ++V + + +L H+  +    N  PW  T +YG 
Sbjct: 142  IGLRGCLAVNGIGKGGGIALFWDES--VNVTIKSYNLRHIDAVITEQNQDPWRATFVYGE 199

Query: 2496 PNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGKTGMHQSRKQAERSNQQQ 2675
            P  Q R  +W     I  + + PWL++ DFNE + Q E        H S  Q  RS  Q 
Sbjct: 200  PKAQDRHLMWTLLRRIKQNTSDPWLMIRDFNEAMWQSE--------HLS--QNRRSETQM 249

Query: 2676 WAHRSGISWRPVH 2714
               RS +S   +H
Sbjct: 250  REFRSVLSDCDLH 262



 Score = 21.2 bits (43), Expect(2) = 2e-06
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 2179 MAWNCQGTHNTLTIQKL 2229
            ++WNC+G      +Q+L
Sbjct: 95   LSWNCRGLGRPRAVQEL 111


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  177 bits (450), Expect = 3e-41
 Identities = 87/247 (35%), Positives = 137/247 (55%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++WGF++  +  MGFP +F   +M+C+ SV+YS+   G     IKP+RGLRQGDP+SPY+
Sbjct: 872  VEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYL 931

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F++  E LS+ +   E++  +  + I + APS+ HL YADD L+ C+A    C+AL+ + 
Sbjct: 932  FLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIF 991

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y  +  Q INK KS+I   P+    + +      ++P       YLG+    G+    
Sbjct: 992  STYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKK 1051

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            L   L +R+  +  GW  K +++AG+ VLIKT      N+ M   QLP    + I+K   
Sbjct: 1052 LFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVA 1111

Query: 4026 DFFWGHD 4046
             F+WG +
Sbjct: 1112 RFWWGKE 1118



 Score = 82.4 bits (202), Expect(2) = 3e-23
 Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
 Frame = +1

Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
            +  + + GL +  F G  YTW N + G+  + ERLDR   N   +     ++ HHL  ++
Sbjct: 445  RHAVEDCGLYEFAFTGFQYTWDNRRKGDANVKERLDRGFGNLALIQQWGGISCHHLVSMS 504

Query: 2836 SDHAPLLLRGSFIHHPIS--------KKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPAN 2991
            SDH PLL        P+S        ++F  E +   H   R +V + W    +     +
Sbjct: 505  SDHCPLLFEND---PPMSRGGNWRRKRRFLFEDMWLTHEGCRGVVERQWLFGVN-----S 556

Query: 2992 LNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYR 3171
            +  KL  +A  L +W + TFG++   + ++ E +   Q        P     +    +  
Sbjct: 557  VVGKLEQVAGGLKRWNQETFGSVKKKVASLREELDVLQRQ------PPTSNIICKRNEVE 610

Query: 3172 QAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
                 +++  E  WKQR+RV W + G+ NT
Sbjct: 611  CLLDGVLEREELLWKQRARVSWFKCGDRNT 640



 Score = 56.2 bits (134), Expect(2) = 3e-23
 Identities = 30/101 (29%), Positives = 51/101 (50%)
 Frame = +3

Query: 2355 GHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDF 2534
            G +GG+CL W   + +  + ++   ++  +    + +   FTG YG P    R   W+  
Sbjct: 346  GARGGMCLFWNNKVVVDYISSSFYFINAMVT-WEDKKKCRFTGFYGHPETSQRHLSWDLL 404

Query: 2535 NSIVPSHNHPWLLMGDFNEILNQMEKKGGKTGMHQSRKQAE 2657
             S+    + PWL  GDFNEIL+  EK G    + +S++Q +
Sbjct: 405  RSLRRVCSEPWLCCGDFNEILDFNEKTG---AVQRSQRQID 442


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  175 bits (443), Expect = 2e-40
 Identities = 87/251 (34%), Positives = 144/251 (57%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W FIE  L KMGF  K+ +++M CIT+V Y +  NG     I P RGLRQGDPLSPY+
Sbjct: 434  VEWNFIEELLKKMGFCEKWISWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYL 493

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            FILC E+L +N+   EQ+ ++  I++   +PS+ HL++A+D L  C A+ + C  +  +L
Sbjct: 494  FILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGIL 553

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
             QY     Q IN  KSSI    ++  ++  +++    I +     SYLG+    G S   
Sbjct: 554  KQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSALGIHSIGGMGSYLGLPESLGGSKTR 613

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   + +R++ +  GW +K +++ G+ V+IK+ ++    +VM   +LP  I +K+     
Sbjct: 614  IFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVA 673

Query: 4026 DFFWGHDAQTR 4058
             F+W  D ++R
Sbjct: 674  KFWWSSDGESR 684


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  174 bits (442), Expect = 2e-40
 Identities = 89/252 (35%), Positives = 139/252 (55%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+E+ ++K+GFPT++   VMNC+TS  +S+  NG       P+RGLRQGDPLSP++
Sbjct: 593  VEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFL 652

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F++C E LS+ L   E++ V+  ++IG     I HL +ADD L+   A  +    +  +L
Sbjct: 653  FVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDIL 712

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y  +  Q +N  KS + +   L+P+    LQ      T      YLG+    G S   
Sbjct: 713  STYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKR 772

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   + +R+ +K KGW  K ++QAGR VLIK        + MQ   +P  I + I+K+ R
Sbjct: 773  VFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCR 832

Query: 4026 DFFWGHDAQTRK 4061
            +FFWG   + R+
Sbjct: 833  NFFWGQKEEERR 844



 Score = 91.7 bits (226), Expect(2) = 2e-28
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
            +++GG      + +  +  +     +DLGF G  +TW+NN+ G+  I ERLDR ++N  W
Sbjct: 151  EKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLW 210

Query: 2788 LNLHPRMTIHHLPRIASDHAPLL-----LRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQ 2952
                P   + HLP+  SDH P++      + +      SK+F+ E +     +   +V +
Sbjct: 211  KIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKE 270

Query: 2953 SWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP 3132
            +W       R  +  + L   A  LL W K  FG++   IR  +  +     M S+ S  
Sbjct: 271  TW------MRGTDAGINLARTANKLLSWSKQKFGHVAKEIRMCQHQMKVL--MESEPSED 322

Query: 3133 ELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
             +     H +        L +  E YW QRSR  W++ G+ NT
Sbjct: 323  NIM----HMRALDARMDELEKREEVYWHQRSRQDWIKSGDKNT 361



 Score = 64.3 bits (155), Expect(2) = 2e-28
 Identities = 30/91 (32%), Positives = 49/91 (53%)
 Frame = +3

Query: 2349 CNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWN 2528
            C   +GGL +LWR+ +K+ V+  + + + + +      + W FTGIYG P  + +     
Sbjct: 66   CRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGE-WRFTGIYGYPEEEHKDKTGA 124

Query: 2529 DFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
              +++  +   PWL  GDFN +L   EKKGG
Sbjct: 125  LLSALARASRRPWLCGGDFNLMLVASEKKGG 155


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  173 bits (438), Expect = 7e-40
 Identities = 84/272 (30%), Positives = 148/272 (54%), Gaps = 1/272 (0%)
 Frame = +3

Query: 3249 GTQHHCLLVHSKPISFFYC-LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVA 3425
            G + +C +     +S  Y  + W F++  L+++GF  K+  +VM C+ +VSYS   NG  
Sbjct: 505  GAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSP 564

Query: 3426 HAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYAD 3605
               + P+RGLRQGDPLSPY+FILC E+LS      +++ V+  IR+ + +P + HL++AD
Sbjct: 565  QGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFAD 624

Query: 3606 DLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPT 3785
            D +  C  +P  C AL  +L +Y  +  Q+IN  KS+I    +   ++ ++++ +  I  
Sbjct: 625  DTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDN 684

Query: 3786 TSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNH 3965
                  YLG+    GR    +   +++RI +++  W  + ++ AG+ +L+K  LS   ++
Sbjct: 685  EGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSY 744

Query: 3966 VMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
             M   +LP  +  +I  +   F+W      RK
Sbjct: 745  AMMCFKLPASLCKQIQSVLTRFWWDSKPDKRK 776



 Score = 76.6 bits (187), Expect(2) = 2e-19
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
 Frame = +1

Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
            +  ++ NGL D+   G+  +W   +   + I  RLDR+L N  W  L P     +L    
Sbjct: 105  RSFVSQNGLWDINHTGNSLSWRGTRYS-HFIKSRLDRALGNCSWSELFPMSKCEYLRFEG 163

Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
            SDH PL+          SK F+ +       ++R +V + WE +    R  ++  K++  
Sbjct: 164  SDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELA----RQDSVLYKISRC 219

Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWL--EHEKQYRQAHQML 3189
              ++++W K    N    I+  ++ +  A S  + +  P L   +  E E  YRQ     
Sbjct: 220  RQSIIKWTKEQNSNSAKAIKKAQQALESALS--ADIPDPSLIGSITQELEAAYRQ----- 272

Query: 3190 MQCNETYWKQRSRVQWLQEGELN 3258
                E +WKQ SRVQWL  G+ N
Sbjct: 273  ---EELFWKQWSRVQWLNSGDRN 292



 Score = 49.3 bits (116), Expect(2) = 2e-19
 Identities = 27/101 (26%), Positives = 44/101 (43%)
 Frame = +3

Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
            +G+   F +   G  GGL L W+ N+++ +L A  + +                      
Sbjct: 17   MGYAHRFTIPPEGLSGGLALYWKENVEVEILEAAPNFI---------------------- 54

Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
                R   W+  +S+    +  WLL GDFN+IL+  EK+GG
Sbjct: 55   --DNRSVFWDKISSLGAQRSSAWLLTGDFNDILDNSEKQGG 93


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  169 bits (429), Expect = 8e-39
 Identities = 86/251 (34%), Positives = 142/251 (56%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W FIE  L KMGF  K+ +++M CIT+V Y +  NG     I P RGLRQGDPLSPY+
Sbjct: 368  VEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYL 427

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            FILC E+L +N+   E+Q ++  I++   +P++ HL++ADD L  C A+ + C  + ++L
Sbjct: 428  FILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEIL 487

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
             QY +   Q IN  KSSI    +++  +   ++    I       SYLG+    G S   
Sbjct: 488  KQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTK 547

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   + +R++ +  GW +K +++ G+ V+IK+  +    +VM   +LP  I +K+     
Sbjct: 548  VFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVA 607

Query: 4026 DFFWGHDAQTR 4058
             F+W  +  +R
Sbjct: 608  KFWWSSNGDSR 618


>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
            italica]
          Length = 950

 Score =  168 bits (426), Expect = 2e-38
 Identities = 90/255 (35%), Positives = 138/255 (54%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W ++E  ++KMGF  ++ + ++ CI++V+Y +  NGV    IKPTRGLRQGDPLSPY+
Sbjct: 159  VEWNYLEKIMLKMGFSRRWVSLILCCISTVTYRVKVNGVLTEEIKPTRGLRQGDPLSPYL 218

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  SS L V E+   L+ I I  NAPSI HL++ADD L+   A+ ++   LQ +L
Sbjct: 219  FLLCAEGFSSMLNVAEEAGRLQGISICANAPSITHLLFADDALLLLKANQENANYLQYVL 278

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q INK KSS++           Q   T  +    +   YLG+    GRS   
Sbjct: 279  QVYEACSGQMINKDKSSVLFSKNTSQTSGDQFLSTLGLAQGVRTDRYLGLPVYMGRSRTQ 338

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
                L +R+ ++  GW  K +++AG+  LIK       ++ M    +   + ++I  +  
Sbjct: 339  TFAYLKDRVWKRIHGWKEKLLSKAGKETLIKAVAQAIPSYAMACFDITKSVSDEISTMIC 398

Query: 4026 DFFWGHDAQTRKDRK 4070
             F+W   AQ  K+ K
Sbjct: 399  RFWW---AQMEKENK 410


>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
          Length = 851

 Score =  167 bits (423), Expect = 4e-38
 Identities = 90/277 (32%), Positives = 148/277 (53%)
 Frame = +3

Query: 3207 LLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCI 3386
            ++  +I  S+  R+      + V +     +  ++W F+E T+   GF  K+  ++M  +
Sbjct: 172  MIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAV 231

Query: 3387 TSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIG 3566
             SV YS+  NG  H +I PTRG+RQGDPLSPY+FILC +ILS  + V      +R +RIG
Sbjct: 232  KSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIG 291

Query: 3567 KNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPE 3746
              AP+I HL +ADD L  C A+ ++C AL+ +   Y     Q IN  KS I    R+   
Sbjct: 292  NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGS 351

Query: 3747 LAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRL 3926
               +L+   NIP       YLG+  + GR    +   +++R++ +   W +K ++ AG+ 
Sbjct: 352  TQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKE 411

Query: 3927 VLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFW 4037
            +L+K+       + M   +LP  I ++I+ +  +F+W
Sbjct: 412  ILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWW 448


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  166 bits (420), Expect = 8e-38
 Identities = 91/246 (36%), Positives = 132/246 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+E  L KMGF   +   VM+C+T+ S S+  NG       P+RGLRQGDPLSP++
Sbjct: 1193 VEWNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFL 1252

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+   ++LS  +  + Q ++L  + IG N   + HL +ADD L    A  Q+C  L  LL
Sbjct: 1253 FLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLL 1312

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
            H Y  +  Q IN  KSSI   P   PE+A  L     IP  S P +YLG+     RS   
Sbjct: 1313 HTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKK 1372

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
             +  + + I RK KGW    ++QAG+ VLIK   +    + M   + P  +  +++ I  
Sbjct: 1373 ALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILA 1432

Query: 4026 DFFWGH 4043
            DF+WG+
Sbjct: 1433 DFWWGN 1438



 Score = 98.6 bits (244), Expect(2) = 2e-28
 Identities = 67/220 (30%), Positives = 108/220 (49%)
 Frame = +1

Query: 2602 KWKRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQ 2781
            KW   GG P    +    ++ +NN  L DL F G  ++W   + G   I ERLDR+L N 
Sbjct: 752  KW---GGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNI 808

Query: 2782 QWLNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWE 2961
             W +  P   I HLP+I SDH PLLL  +      ++ F+ E +   H +  +++ +SW 
Sbjct: 809  AWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWP 868

Query: 2962 SSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELF 3141
             ++  +   + N  L     AL  W K  F N PS+   + + ++  + +  Q + P+  
Sbjct: 869  PAFGGSAMRSWNRNLLSCGKALKMWSKEKFSN-PSV--QVADLLSDIEKL-HQSNPPDAH 924

Query: 3142 YWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
            + +       Q  ++  Q +E YW QRSRV WL+ G+ N+
Sbjct: 925  HQINILTD--QVTKLWTQ-DEMYWHQRSRVNWLKLGDQNS 961



 Score = 57.4 bits (137), Expect(2) = 2e-28
 Identities = 26/85 (30%), Positives = 48/85 (56%)
 Frame = +3

Query: 2367 GLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDFNSIV 2546
            GL L W   +++S+L ++ + +   +  ++++     T +YG P+   ++  W    S  
Sbjct: 671  GLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRF 730

Query: 2547 PSHNHPWLLMGDFNEILNQMEKKGG 2621
            P  + PWL++GDFNE+L+  EK GG
Sbjct: 731  PVQSLPWLVLGDFNEVLDPSEKWGG 755


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  165 bits (418), Expect = 1e-37
 Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 1/268 (0%)
 Frame = +3

Query: 3261 HCLLVHSKPISFFYC-LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFI 3437
            HC +     +S  Y  ++W F++  L + GF + + ++V+ C+TSVSYS   NG     +
Sbjct: 463  HCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKV 522

Query: 3438 KPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLI 3617
             PTRGLRQGDPLSP +FILC E+LS      ++   L  +R+  N P + HL++ADD + 
Sbjct: 523  VPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMF 582

Query: 3618 TCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQP 3797
               +DP+SC  L ++L +Y  +  Q+IN  KSS+    +    +  Q++    I      
Sbjct: 583  FSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGT 642

Query: 3798 PSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQA 3977
              YLG+    GR    +   ++++I +K+  W S+ ++QAG+ V++K  L+    + M  
Sbjct: 643  GKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSC 702

Query: 3978 QQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
             +LP  +  KI  +   F+W      RK
Sbjct: 703  FKLPSALCRKIQSLLTRFWWDTKPDVRK 730



 Score = 75.1 bits (183), Expect(2) = 1e-10
 Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
            ++RGG P         +  I+ NGL DL + G+P++W   +  +  + +RLDR++SN  W
Sbjct: 43   EKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRY-DWFVRQRLDRAMSNNSW 101

Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESS 2967
            L   P     +L    SDH PL++           +F+ ++ R     + N +IQ    +
Sbjct: 102  LESFPSGRSEYLRFEGSDHRPLVVFVDEARVKRRGQFRFDN-RLRDNDVVNALIQ---ET 157

Query: 2968 YSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP----E 3135
            ++    A++  K+N     ++ W +    N   LI   ++ + +A  + +    P     
Sbjct: 158  WTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEA--LTADPPNPTTIGA 215

Query: 3136 LFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
            L   LEH            +  E +WKQRSRV WL  G+ NT
Sbjct: 216  LTATLEH----------AYKLEEQFWKQRSRVLWLHSGDRNT 247



 Score = 21.2 bits (43), Expect(2) = 1e-10
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 2586 NEILNQMEKKGG 2621
            NEIL+  EK+GG
Sbjct: 36   NEILDNSEKRGG 47


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  164 bits (416), Expect = 2e-37
 Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 3/289 (1%)
 Frame = +3

Query: 3204 NLLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNC 3383
            +L+  +I  +M  R  ++   + +       +  ++WGF+   L+ MGF  ++ N VM+C
Sbjct: 557  SLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSC 616

Query: 3384 ITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDI-- 3557
            + +VSYS   NG     + P+RGLRQGDPLSP++FIL  +  S    +++Q+ V ++I  
Sbjct: 617  VATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQ---MVKQKVVSKEIHG 673

Query: 3558 -RIGKNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPR 3734
             +  +N P I HL++ADD L+   A  Q CL +  +L++Y  +  Q IN  KS +     
Sbjct: 674  AKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRG 733

Query: 3735 LDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQ 3914
            +  E  ++L    ++    +   YLGI    GRS   L  ELL+R+ +K +GW  K +++
Sbjct: 734  VSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSR 793

Query: 3915 AGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
            AG+ VLIK  +     ++M   +LP  +  +I      F+WG     RK
Sbjct: 794  AGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERK 842



 Score = 90.1 bits (222), Expect(3) = 4e-32
 Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
 Frame = +1

Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
            + V+++  L DL F G  +TW   +  E+ I ERLDR + ++ WL+L P   I H  R  
Sbjct: 163  RNVMDDCSLGDLRFVGQWHTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYC 222

Query: 2836 SDHAPLLLR---GSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKL 3006
            SDHA ++LR      +    +  F  E    L      +V  +W ++        +  KL
Sbjct: 223  SDHAAIVLRCLGNEGMPRRRAGGFWFETFWLLDDTCEEVVRGAWNAA----EGGRICEKL 278

Query: 3007 NDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQM 3186
              +A  L  W K TFG+L   I A+E+ +  AQ   + +   E    LE E     A   
Sbjct: 279  GAVARELQGWSKKTFGSLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAK-- 336

Query: 3187 LMQCNETYWKQRSRVQWLQEGELNT 3261
                NE YW  RSRV  +++G+ NT
Sbjct: 337  ----NEAYWYLRSRVAEVKDGDRNT 357



 Score = 68.9 bits (167), Expect(3) = 4e-32
 Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
 Frame = +3

Query: 2316 SLGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQP-WLFTGIYG 2492
            SLGF   F +SC G  GGLC+ W+    IS  + + S  H+  +  +N    W F GIYG
Sbjct: 50   SLGFSGAFGVSCVGRAGGLCMFWKEET-ISFRMVSFSQNHICGDVGSNGDVRWRFVGIYG 108

Query: 2493 PPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
             P  + +   W     +   +  P +  GDFNEIL+  EK+GG
Sbjct: 109  WPEEENKHKTWALIKGLCDEYEGPIVFGGDFNEILSYDEKEGG 151



 Score = 30.0 bits (66), Expect(3) = 4e-32
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 2170 MNCMAWNCQGTHNTLTIQKLREYTRKFKLDLLF 2268
            M  + WNCQG  N  T+++LR        D LF
Sbjct: 1    MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLF 33


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  164 bits (415), Expect = 3e-37
 Identities = 85/252 (33%), Positives = 135/252 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+   ++K+GF T + N +M C+++V+Y I  NG       P RGLRQGDPLSPY+
Sbjct: 840  VEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYL 899

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  S+ L   E++  L  IRI + APS+ HL++ADD LI C A+      LQ +L
Sbjct: 900  FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 959

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q INK KS+++  P       + +    N+   +    YLG+    GRS   
Sbjct: 960  QIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTK 1019

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   L  RI ++ +GW  K +++AG+ +LIK          M   +L  ++ ++I K+  
Sbjct: 1020 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1079

Query: 4026 DFFWGHDAQTRK 4061
             ++W +  +  K
Sbjct: 1080 KYWWSNQEKDNK 1091



 Score = 84.7 bits (208), Expect(2) = 1e-20
 Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
            +++GGR    +  +  +  + + GL DLGF GD +TW N+    E  I ERLDR+++N +
Sbjct: 392  EKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPE 451

Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
            W  + P   + +     SDH P+++         RG   H+     F+ E       + +
Sbjct: 452  WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 507

Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCS 3117
             +V ++W+ S +  +   ++  L  +A  L  W  +  G+L   ++ +++ +   +    
Sbjct: 508  EVVKEAWDVS-AGLQGLPVHASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRR--Q 564

Query: 3118 QVSGPELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
             +S  ++      E+  R   + L Q  + YWKQR+   WL +G+ NT
Sbjct: 565  PISRDQVV----REEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNT 608



 Score = 45.4 bits (106), Expect(2) = 1e-20
 Identities = 17/47 (36%), Positives = 27/47 (57%)
 Frame = +3

Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
            +YG  + + +   W     ++ +   PWL+ GDFNEIL   EK+GG+
Sbjct: 351  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGR 397


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  164 bits (415), Expect = 3e-37
 Identities = 88/280 (31%), Positives = 148/280 (52%)
 Frame = +3

Query: 3207 LLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCI 3386
            L+  ++  S+ SRR  Q   + V +     +  ++W F+E  +I++GF  ++  ++M C+
Sbjct: 913  LVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCV 972

Query: 3387 TSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIG 3566
            TSVSY +  NG  +  I P+RG+RQGDPLSPY+F+ C E+LS+ L   E    +  ++I 
Sbjct: 973  TSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKIT 1032

Query: 3567 KNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPE 3746
            K+  +I HL++ADD L  C A  Q+   L  +  +Y  +  Q IN  KSSII   ++   
Sbjct: 1033 KDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTM 1092

Query: 3747 LAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRL 3926
              Q+L     I        YLG+  + GR    L   ++ +++ + +GW    ++ AG+ 
Sbjct: 1093 RRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKE 1152

Query: 3927 VLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFWGHD 4046
            ++IK        + M    LP  I N+I+ +   F+WG +
Sbjct: 1153 IVIKAIAMALPVYSMNCFLLPTLICNEINSLITAFWWGKE 1192



 Score = 77.8 bits (190), Expect(3) = 7e-30
 Identities = 39/102 (38%), Positives = 58/102 (56%)
 Frame = +3

Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
            +GF D   +S  G  GGL + W+ +L I V+  +  L+ +Y+E  N +  +  + IYG P
Sbjct: 413  MGFEDMCIISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFN--FYLSCIYGHP 470

Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
             P  R +LW     +    + PW++ GDFNEILN  EKKGG+
Sbjct: 471  IPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGR 512



 Score = 67.0 bits (162), Expect(3) = 7e-30
 Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
            +++GGR   I        +IN   + DL   G+PY+W   +  E  I   LDR   N  W
Sbjct: 507  EKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQNET-IESCLDRVFINSDW 565

Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKK--FKLEHLRFLHPQMRNIVIQSWE 2961
                P      LP   SDHAP+++         +K+  F+ +   F      + V + W 
Sbjct: 566  QASFPAFETEFLPIAGSDHAPVII--DIAEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWN 623

Query: 2962 SSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELF 3141
               S +       KL+     L +WK+ T  N          T  + +++  +V   E  
Sbjct: 624  RGRSDSH-GGYYEKLHCCRQELAKWKRRTKTN----------TAEKIETLKYRVDAAERD 672

Query: 3142 YWLEHEK--QYRQAHQMLMQCNETYWKQRSRVQWLQEGELNTIAY*STQNL 3288
            + L H+   + RQ      +  E YW  +SR +W+  G+ NT+ + ++  L
Sbjct: 673  HTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKL 723



 Score = 36.6 bits (83), Expect(3) = 7e-30
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +1

Query: 2185 WNCQGTHNTLTIQKLREYTRKFKLDLLFFV 2274
            WNCQG    LT+++L E  R + LD+LF +
Sbjct: 368  WNCQGLGQPLTVRRLEEVQRVYFLDMLFLI 397


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  164 bits (414), Expect = 4e-37
 Identities = 85/252 (33%), Positives = 134/252 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+   ++K+GF T + N +M C+++V+Y I  NG       P RGLRQGDPLSPY+
Sbjct: 813  VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 872

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  S+ L   E++  L  IRI + APS+ HL++ADD LI C A+      LQ +L
Sbjct: 873  FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 932

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q INK KS+++  P         +    N+   +    YLG+    GRS   
Sbjct: 933  QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 992

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   L  RI ++ +GW  K +++AG+ +LIK          M   +L  ++ ++I K+  
Sbjct: 993  IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1052

Query: 4026 DFFWGHDAQTRK 4061
             ++W +  +  K
Sbjct: 1053 KYWWSNQEKDNK 1064



 Score = 58.9 bits (141), Expect(2) = 5e-12
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
            +++ GR    +  +  +  + + GL DLGF GD +TW N+    E  I E LDR+++N +
Sbjct: 440  EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 499

Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
            W  + P   + +     SDH P+++         RG   H+     F+ E       + +
Sbjct: 500  WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 555

Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
             +V ++W+ S +  +   ++  L  +A  L  W  +  G+L   ++ +++ +
Sbjct: 556  EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 606



 Score = 42.0 bits (97), Expect(2) = 5e-12
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
            +YG  + + +   W     ++ +   PWL+ GDFNEIL   EK+ G+
Sbjct: 399  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 445


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  164 bits (414), Expect = 4e-37
 Identities = 83/244 (34%), Positives = 135/244 (55%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+E T+   GF  K+  ++M  + SV YS+  NG  H +I PTRG+RQGDPLSPY+
Sbjct: 740  VEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYL 799

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            FILC +ILS  +        LR +RIG  AP+I HL +ADD L  C A+ ++C AL+ + 
Sbjct: 800  FILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVF 859

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q IN  KS I    R+      +L+    IP       YLG+  + GR    
Sbjct: 860  DVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKE 919

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   +++R++++   W ++ ++ AG+ +++K+       + M   +LP  I ++I+ +  
Sbjct: 920  MFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLM 979

Query: 4026 DFFW 4037
            +F+W
Sbjct: 980  NFWW 983



 Score = 75.1 bits (183), Expect(2) = 3e-23
 Identities = 36/101 (35%), Positives = 56/101 (55%)
 Frame = +3

Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
            LGF +      NG  GGL L+W+ N+ +S++  ++ L+  ++    N++ +  + +YG P
Sbjct: 206  LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHV--TFNNKSFYLSCVYGHP 263

Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
                R  LW     I  + N  WLL+GDFNEIL+  EK GG
Sbjct: 264  TQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGG 304



 Score = 63.5 bits (153), Expect(2) = 3e-23
 Identities = 46/202 (22%), Positives = 90/202 (44%)
 Frame = +1

Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
            + ++++  + D+   GD ++W   +    V    LDR   N  W    P      L    
Sbjct: 316  RNMVSHCDIEDMRSKGDRFSWVGERHTHTVKC-CLDRVFINSAWTATFPYAETEFLDFTG 374

Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
            SDH P+L+  +      SK F+ ++     P  + IV  SW ++ + +R   +  +++  
Sbjct: 375  SDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRN-SRSTPITERISSC 433

Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQMLMQ 3195
              A+ + K ++  N    I+ ++ ++ +A     +V    +        Q +++      
Sbjct: 434  RQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI-------PQLQESLAKAFS 486

Query: 3196 CNETYWKQRSRVQWLQEGELNT 3261
              E YWKQ+SR QW++EG+ NT
Sbjct: 487  DEEIYWKQKSRNQWMKEGDQNT 508


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  164 bits (414), Expect = 4e-37
 Identities = 83/244 (34%), Positives = 135/244 (55%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+E T+   GF  K+  ++M  + SV YS+  NG  H +I PTRG+RQGDPLSPY+
Sbjct: 966  VEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYL 1025

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            FILC +ILS  +        LR +RIG  AP+I HL +ADD L  C A+ ++C AL+ + 
Sbjct: 1026 FILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVF 1085

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q IN  KS I    R+      +L+    IP       YLG+  + GR    
Sbjct: 1086 DVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKE 1145

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   +++R++++   W ++ ++ AG+ +++K+       + M   +LP  I ++I+ +  
Sbjct: 1146 MFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLM 1205

Query: 4026 DFFW 4037
            +F+W
Sbjct: 1206 NFWW 1209



 Score = 75.1 bits (183), Expect(2) = 9e-24
 Identities = 36/101 (35%), Positives = 56/101 (55%)
 Frame = +3

Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
            LGF +      NG  GGL L+W+ N+ +S++  ++ L+  ++    N++ +  + +YG P
Sbjct: 432  LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHV--TFNNKSFYLSCVYGHP 489

Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
                R  LW     I  + N  WLL+GDFNEIL+  EK GG
Sbjct: 490  TQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGG 530



 Score = 65.5 bits (158), Expect(2) = 9e-24
 Identities = 47/202 (23%), Positives = 91/202 (45%)
 Frame = +1

Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
            + ++++  + D+   GD ++W   +    V    LDR   N  W    P   I  L    
Sbjct: 542  RNMVSHCDIEDMRSKGDRFSWVGERHTHTVKC-CLDRVFINSAWTATFPYAEIEFLDFTG 600

Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
            SDH P+L+  +      SK F+ ++     P  + IV  SW ++ + +R   +  +++  
Sbjct: 601  SDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRN-SRSTPITERISSC 659

Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQMLMQ 3195
              A+ + K ++  N    I+ ++ ++ +A     +V    +        Q +++      
Sbjct: 660  RQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI-------PQLQESLAKAFS 712

Query: 3196 CNETYWKQRSRVQWLQEGELNT 3261
              E YWKQ+SR QW++EG+ NT
Sbjct: 713  DEEIYWKQKSRNQWMKEGDQNT 734


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  163 bits (413), Expect = 5e-37
 Identities = 85/252 (33%), Positives = 134/252 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+   ++K+GF T + N +M C+++V+Y I  NG       P RGLRQGDPLSPY+
Sbjct: 785  VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 844

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  S+ L   E++  L  IRI + APS+ HL++ADD LI C A+      LQ +L
Sbjct: 845  FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 904

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q INK KS+++  P         +    N+   +    YLG+    GRS   
Sbjct: 905  QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 964

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   L  RI ++ +GW  K +++AG+ +LIK          M   +L  ++ ++I K+  
Sbjct: 965  IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1024

Query: 4026 DFFWGHDAQTRK 4061
             ++W +  +  K
Sbjct: 1025 KYWWSNQEKDNK 1036



 Score = 58.9 bits (141), Expect(2) = 5e-12
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
            +++ GR    +  +  +  + + GL DLGF GD +TW N+    E  I E LDR+++N +
Sbjct: 437  EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 496

Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
            W  + P   + +     SDH P+++         RG   H+     F+ E       + +
Sbjct: 497  WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 552

Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
             +V ++W+ S +  +   ++  L  +A  L  W  +  G+L   ++ +++ +
Sbjct: 553  EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 603



 Score = 42.0 bits (97), Expect(2) = 5e-12
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
            +YG  + + +   W     ++ +   PWL+ GDFNEIL   EK+ G+
Sbjct: 396  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 442


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  163 bits (413), Expect = 5e-37
 Identities = 85/252 (33%), Positives = 134/252 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+   ++K+GF T + N +M C+++V+Y I  NG       P RGLRQGDPLSPY+
Sbjct: 781  VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 840

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  S+ L   E++  L  IRI + APS+ HL++ADD LI C A+      LQ +L
Sbjct: 841  FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 900

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y     Q INK KS+++  P         +    N+   +    YLG+    GRS   
Sbjct: 901  QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 960

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
            +   L  RI ++ +GW  K +++AG+ +LIK          M   +L  ++ ++I K+  
Sbjct: 961  IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1020

Query: 4026 DFFWGHDAQTRK 4061
             ++W +  +  K
Sbjct: 1021 KYWWSNQEKDNK 1032



 Score = 58.9 bits (141), Expect(2) = 5e-12
 Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
            +++ GR    +  +  +  + + GL DLGF GD +TW N+    E  I E LDR+++N +
Sbjct: 433  EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 492

Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
            W  + P   + +     SDH P+++         RG   H+     F+ E       + +
Sbjct: 493  WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 548

Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
             +V ++W+ S +  +   ++  L  +A  L  W  +  G+L   ++ +++ +
Sbjct: 549  EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 599



 Score = 42.0 bits (97), Expect(2) = 5e-12
 Identities = 16/47 (34%), Positives = 26/47 (55%)
 Frame = +3

Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
            +YG  + + +   W     ++ +   PWL+ GDFNEIL   EK+ G+
Sbjct: 392  LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 438


>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
            gi|462398983|gb|EMJ04651.1| hypothetical protein
            PRUPE_ppa022115mg [Prunus persica]
          Length = 1755

 Score =  162 bits (411), Expect = 9e-37
 Identities = 84/252 (33%), Positives = 134/252 (53%)
 Frame = +3

Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
            ++W F+E  ++ MGFP  +   VM+C+T+VSYS   NG     + PTRGLRQGDPLSPY+
Sbjct: 1002 VEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYL 1061

Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
            F+LC E  ++ L   E+Q  L+ I I + AP++ HL +ADD  +   A   +C  L+ + 
Sbjct: 1062 FLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKATDNNCGVLKHIF 1121

Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
              Y  +  Q IN  KS +     +  +   +L     +P      +YLG+    GR+   
Sbjct: 1122 EVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTV 1181

Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
                L  R+ +K +GW  + ++ AG+ VL+K        +VM    LP  + ++I+++  
Sbjct: 1182 CFRYLKERVWKKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMA 1241

Query: 4026 DFFWGHDAQTRK 4061
             F+WG   + RK
Sbjct: 1242 RFWWGQQGENRK 1253



 Score =  104 bits (259), Expect(2) = 4e-32
 Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
 Frame = +1

Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
            ++ GG      Q    + +++  G  DLGF+G  +TW   + G+  +  RLDR+L+   W
Sbjct: 558  EKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTWKC-RFGDGFVRVRLDRALATTSW 616

Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKK-----FKLEHLRFLHPQMRNIVIQ 2952
             NL P  ++ HL    SDH P+L+R   I H   +K     F  E +   H      + Q
Sbjct: 617  QNLFPGFSVQHLDPSRSDHLPILVR---IRHATCQKSRYRRFHFEAMWTTHVDCEKTIKQ 673

Query: 2953 SWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP 3132
             WES  +      L+ K+  +   L +W KSTFG++       EET      + S    P
Sbjct: 674  VWESVGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHI------KEETRVLRAKLASLFQAP 727

Query: 3133 ELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
                  E  +  +++   L+  NE YW QRSR  WL+ G+ NT
Sbjct: 728  YSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWLKAGDKNT 770



 Score = 64.3 bits (155), Expect(2) = 4e-32
 Identities = 32/89 (35%), Positives = 45/89 (50%)
 Frame = +3

Query: 2355 GHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDF 2534
            G+ GGL LLW+  + + V   +   + V I        W  T  YG P  Q R+  W   
Sbjct: 474  GYSGGLALLWKEEVDVHVCAFSDHFIDVQIGSNGGGDRWRLTVFYGFPAVQDREKSWILL 533

Query: 2535 NSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
            + +   +  PWL +GDFNEIL+  EK+GG
Sbjct: 534  DQLGHHNQLPWLCVGDFNEILSTDEKEGG 562


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