BLASTX nr result
ID: Papaver27_contig00004237
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00004237
(4074 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 147 1e-52
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo... 158 2e-50
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 177 3e-41
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 175 2e-40
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 174 2e-40
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 173 7e-40
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 169 8e-39
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 168 2e-38
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 167 4e-38
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 166 8e-38
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 165 1e-37
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 164 2e-37
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 164 3e-37
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 164 3e-37
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 164 4e-37
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 164 4e-37
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 164 4e-37
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 163 5e-37
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 163 5e-37
ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prun... 162 9e-37
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 147 bits (372), Expect(2) = 1e-52
Identities = 82/255 (32%), Positives = 127/255 (49%)
Frame = +3
Query: 3297 FYCLDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLS 3476
F ++W F+E L++ GF + N V+ C++SVS+SI NG + P+RGLRQGDPLS
Sbjct: 234 FSQVEWDFLEAALLQFGFARPWVNLVLACVSSVSFSIVLNGKPGRYFSPSRGLRQGDPLS 293
Query: 3477 PYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQ 3656
PY+F++ E LS L + L I++ + P++ HL +ADD L A + L
Sbjct: 294 PYLFLIVSEALSLRLTKAVNEKHLLGIKLCRGCPTLSHLFFADDALFFVKATLSNVSKLA 353
Query: 3657 QLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRS 3836
+ +Y + Q I++ KSSI P ++A+ + P YLG+ GR
Sbjct: 354 AIFEEYCRASGQVISREKSSIFFSPNTPAQMARLMCELMGFVEVENPGKYLGLPTIWGRL 413
Query: 3837 SAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDK 4016
+ + RI RK GW K ++ AG+ LIK+ + M LP + N+I+
Sbjct: 414 KKDALSYITERINRKLDGWKEKNLSWAGKETLIKSVAMVIPSFPMSCFLLPKYLGNQINS 473
Query: 4017 ITRDFFWGHDAQTRK 4061
+F+WG K
Sbjct: 474 AISNFWWGKSESINK 488
Score = 89.7 bits (221), Expect(2) = 1e-52
Identities = 65/236 (27%), Positives = 105/236 (44%), Gaps = 1/236 (0%)
Frame = +1
Query: 2617 GGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNL 2796
GG N+ L ++I + L D+GF G +TW+ + ++ ERLDR+L ++ WL
Sbjct: 9 GGAQWNPNRHQFLSDLIVSCNLFDIGFAGQQFTWARKEGNTIILQERLDRALIDENWLLK 68
Query: 2797 HPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSP 2976
P + HL R+ SDH P++L + F+ E P+ IV + W +
Sbjct: 69 WPETNLSHLTRLGSDHTPIVLSTDNVSRKGIPLFRFESYWAEEPESSRIVEECWLGVTNG 128
Query: 2977 TRPANLNMKLNDIATALLQWKKSTF-GNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLE 3153
+ N LN +L W +S F +L I+A E + Q + E F +
Sbjct: 129 RPISTWNSNLNRCKKSLKSWSRSKFPKSLKVKIKACIEELDDLQVL-------EPFSSSD 181
Query: 3154 HEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNTIAY*STQNLLVFSIASTGVS 3321
+ + L E +W QRSRV+WL+ G + ++ L +I+S G S
Sbjct: 182 KQVELSSKLSELWIKEEKFWHQRSRVKWLKSGVFGFLERIGSEKSL--NISSKGFS 235
>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
Length = 1170
Score = 158 bits (399), Expect(2) = 2e-50
Identities = 80/272 (29%), Positives = 147/272 (54%)
Frame = +3
Query: 3246 RGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVA 3425
R Q+ C L +F + +DW F++ + +MGF K+++++M C+TSV Y++ FNG
Sbjct: 430 RENQNFCALKLDLSKAFDH-VDWQFLDGVMERMGFCDKWRSWIMACVTSVQYNVRFNGHL 488
Query: 3426 HAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYAD 3605
PTRGLRQGDPLSPY+F+L + LS+ + E + +++ +++ + AP I HL++AD
Sbjct: 489 LEPFSPTRGLRQGDPLSPYLFLLVADGLSNIIKSNESEGLIQPLKVCRRAPGISHLLFAD 548
Query: 3606 DLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPT 3785
D L+ AD + ++ +L Y +S Q IN K S++ + + ++ +
Sbjct: 549 DSLLFFKADTEQASRIRDVLQMYESSTGQLINPSKCSMLFSDFCPQQHQEDIKRILGVTN 608
Query: 3786 TSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNH 3965
+S YLG+ GR A + +R+ ++ W K ++ + VLIK+ +
Sbjct: 609 SSFEEKYLGLPTPEGRMKAGQFQPIKDRLSKRMSDWNEKYMSSGAKDVLIKSVAQALPTY 668
Query: 3966 VMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
M ++ + ++ ++ R+F+WGH+ +K
Sbjct: 669 TMGIFKMTDKFCEEVSQMIRNFWWGHEKGEKK 700
Score = 71.6 bits (174), Expect(2) = 2e-50
Identities = 47/207 (22%), Positives = 90/207 (43%)
Frame = +1
Query: 2641 QGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHH 2820
Q + V+++ L DLGFHG P+T+ N Q G DR++ ++ + + T+ +
Sbjct: 248 QMREFRSVLSDCDLHDLGFHGIPWTYDNMQRG--------DRNVRKEEHIRYQRQQTMRY 299
Query: 2821 LPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNM 3000
E + + ++ +W + T +++
Sbjct: 300 ----------------------------EEVWERESSLPEVIQSAWSDGNAITNLGDISA 331
Query: 3001 KLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAH 3180
K+ + L +W K GN+ I A+ + + + +SM S S ++ +Q ++
Sbjct: 332 KMKNTMCKLSRWSKEKIGNVRKKIAALRDKLRECRSMGSLDSDVQV-------RQIKKEL 384
Query: 3181 QMLMQCNETYWKQRSRVQWLQEGELNT 3261
+ L+ E +WKQRSR+ WL+EG+ NT
Sbjct: 385 EELLHREEIWWKQRSRIMWLKEGDRNT 411
Score = 60.8 bits (146), Expect(2) = 2e-06
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 1/133 (0%)
Frame = +3
Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHV-YIEPVNNSQPWLFTGIYGP 2495
+G C A++ G GG+ L W + ++V + + +L H+ + N PW T +YG
Sbjct: 142 IGLRGCLAVNGIGKGGGIALFWDES--VNVTIKSYNLRHIDAVITEQNQDPWRATFVYGE 199
Query: 2496 PNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGKTGMHQSRKQAERSNQQQ 2675
P Q R +W I + + PWL++ DFNE + Q E H S Q RS Q
Sbjct: 200 PKAQDRHLMWTLLRRIKQNTSDPWLMIRDFNEAMWQSE--------HLS--QNRRSETQM 249
Query: 2676 WAHRSGISWRPVH 2714
RS +S +H
Sbjct: 250 REFRSVLSDCDLH 262
Score = 21.2 bits (43), Expect(2) = 2e-06
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 2179 MAWNCQGTHNTLTIQKL 2229
++WNC+G +Q+L
Sbjct: 95 LSWNCRGLGRPRAVQEL 111
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 177 bits (450), Expect = 3e-41
Identities = 87/247 (35%), Positives = 137/247 (55%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++WGF++ + MGFP +F +M+C+ SV+YS+ G IKP+RGLRQGDP+SPY+
Sbjct: 872 VEWGFLQRMMEVMGFPDRFVFLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYL 931
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F++ E LS+ + E++ + + I + APS+ HL YADD L+ C+A C+AL+ +
Sbjct: 932 FLIVAEGLSALIRKAEREQQIHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIF 991
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y + Q INK KS+I P+ + + ++P YLG+ G+
Sbjct: 992 STYEAASGQKINKDKSAICFSPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKK 1051
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
L L +R+ + GW K +++AG+ VLIKT N+ M QLP + I+K
Sbjct: 1052 LFQSLPDRVWNRVHGWEGKLLSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVA 1111
Query: 4026 DFFWGHD 4046
F+WG +
Sbjct: 1112 RFWWGKE 1118
Score = 82.4 bits (202), Expect(2) = 3e-23
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 8/210 (3%)
Frame = +1
Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
+ + + GL + F G YTW N + G+ + ERLDR N + ++ HHL ++
Sbjct: 445 RHAVEDCGLYEFAFTGFQYTWDNRRKGDANVKERLDRGFGNLALIQQWGGISCHHLVSMS 504
Query: 2836 SDHAPLLLRGSFIHHPIS--------KKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPAN 2991
SDH PLL P+S ++F E + H R +V + W + +
Sbjct: 505 SDHCPLLFEND---PPMSRGGNWRRKRRFLFEDMWLTHEGCRGVVERQWLFGVN-----S 556
Query: 2992 LNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYR 3171
+ KL +A L +W + TFG++ + ++ E + Q P + +
Sbjct: 557 VVGKLEQVAGGLKRWNQETFGSVKKKVASLREELDVLQRQ------PPTSNIICKRNEVE 610
Query: 3172 QAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
+++ E WKQR+RV W + G+ NT
Sbjct: 611 CLLDGVLEREELLWKQRARVSWFKCGDRNT 640
Score = 56.2 bits (134), Expect(2) = 3e-23
Identities = 30/101 (29%), Positives = 51/101 (50%)
Frame = +3
Query: 2355 GHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDF 2534
G +GG+CL W + + + ++ ++ + + + FTG YG P R W+
Sbjct: 346 GARGGMCLFWNNKVVVDYISSSFYFINAMVT-WEDKKKCRFTGFYGHPETSQRHLSWDLL 404
Query: 2535 NSIVPSHNHPWLLMGDFNEILNQMEKKGGKTGMHQSRKQAE 2657
S+ + PWL GDFNEIL+ EK G + +S++Q +
Sbjct: 405 RSLRRVCSEPWLCCGDFNEILDFNEKTG---AVQRSQRQID 442
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 175 bits (443), Expect = 2e-40
Identities = 87/251 (34%), Positives = 144/251 (57%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W FIE L KMGF K+ +++M CIT+V Y + NG I P RGLRQGDPLSPY+
Sbjct: 434 VEWNFIEELLKKMGFCEKWISWIMWCITTVQYRVLLNGQPRGLIVPKRGLRQGDPLSPYL 493
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
FILC E+L +N+ EQ+ ++ I++ +PS+ HL++A+D L C A+ + C + +L
Sbjct: 494 FILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANKEQCGVILGIL 553
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
QY Q IN KSSI ++ ++ +++ I + SYLG+ G S
Sbjct: 554 KQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSALGIHSIGGMGSYLGLPESLGGSKTR 613
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ + +R++ + GW +K +++ G+ V+IK+ ++ +VM +LP I +K+
Sbjct: 614 IFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAVLPTYVMSCFRLPKTITSKLTSAVA 673
Query: 4026 DFFWGHDAQTR 4058
F+W D ++R
Sbjct: 674 KFWWSSDGESR 684
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 174 bits (442), Expect = 2e-40
Identities = 89/252 (35%), Positives = 139/252 (55%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+E+ ++K+GFPT++ VMNC+TS +S+ NG P+RGLRQGDPLSP++
Sbjct: 593 VEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFL 652
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F++C E LS+ L E++ V+ ++IG I HL +ADD L+ A + + +L
Sbjct: 653 FVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDIL 712
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y + Q +N KS + + L+P+ LQ T YLG+ G S
Sbjct: 713 STYEAASGQKLNMEKSEMSYSRNLEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKR 772
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ + +R+ +K KGW K ++QAGR VLIK + MQ +P I + I+K+ R
Sbjct: 773 VFQAIQDRVWKKLKGWKGKYLSQAGREVLIKAVAQAIPTYAMQCFVIPKSIIDGIEKMCR 832
Query: 4026 DFFWGHDAQTRK 4061
+FFWG + R+
Sbjct: 833 NFFWGQKEEERR 844
Score = 91.7 bits (226), Expect(2) = 2e-28
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
+++GG + + + + +DLGF G +TW+NN+ G+ I ERLDR ++N W
Sbjct: 151 EKKGGDGFNSREADIFRNAMEECHFMDLGFVGYEFTWTNNRGGDANIQERLDRFVANDLW 210
Query: 2788 LNLHPRMTIHHLPRIASDHAPLL-----LRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQ 2952
P + HLP+ SDH P++ + + SK+F+ E + + +V +
Sbjct: 211 KIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDEVVKE 270
Query: 2953 SWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP 3132
+W R + + L A LL W K FG++ IR + + M S+ S
Sbjct: 271 TW------MRGTDAGINLARTANKLLSWSKQKFGHVAKEIRMCQHQMKVL--MESEPSED 322
Query: 3133 ELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
+ H + L + E YW QRSR W++ G+ NT
Sbjct: 323 NIM----HMRALDARMDELEKREEVYWHQRSRQDWIKSGDKNT 361
Score = 64.3 bits (155), Expect(2) = 2e-28
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +3
Query: 2349 CNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWN 2528
C +GGL +LWR+ +K+ V+ + + + + + + W FTGIYG P + +
Sbjct: 66 CRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGE-WRFTGIYGYPEEEHKDKTGA 124
Query: 2529 DFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
+++ + PWL GDFN +L EKKGG
Sbjct: 125 LLSALARASRRPWLCGGDFNLMLVASEKKGG 155
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 173 bits (438), Expect = 7e-40
Identities = 84/272 (30%), Positives = 148/272 (54%), Gaps = 1/272 (0%)
Frame = +3
Query: 3249 GTQHHCLLVHSKPISFFYC-LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVA 3425
G + +C + +S Y + W F++ L+++GF K+ +VM C+ +VSYS NG
Sbjct: 505 GAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSP 564
Query: 3426 HAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYAD 3605
+ P+RGLRQGDPLSPY+FILC E+LS +++ V+ IR+ + +P + HL++AD
Sbjct: 565 QGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQVNHLLFAD 624
Query: 3606 DLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPT 3785
D + C +P C AL +L +Y + Q+IN KS+I + ++ ++++ + I
Sbjct: 625 DTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRVKLSLRIDN 684
Query: 3786 TSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNH 3965
YLG+ GR + +++RI +++ W + ++ AG+ +L+K LS ++
Sbjct: 685 EGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSY 744
Query: 3966 VMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
M +LP + +I + F+W RK
Sbjct: 745 AMMCFKLPASLCKQIQSVLTRFWWDSKPDKRK 776
Score = 76.6 bits (187), Expect(2) = 2e-19
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Frame = +1
Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
+ ++ NGL D+ G+ +W + + I RLDR+L N W L P +L
Sbjct: 105 RSFVSQNGLWDINHTGNSLSWRGTRYS-HFIKSRLDRALGNCSWSELFPMSKCEYLRFEG 163
Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
SDH PL+ SK F+ + ++R +V + WE + R ++ K++
Sbjct: 164 SDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELA----RQDSVLYKISRC 219
Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWL--EHEKQYRQAHQML 3189
++++W K N I+ ++ + A S + + P L + E E YRQ
Sbjct: 220 RQSIIKWTKEQNSNSAKAIKKAQQALESALS--ADIPDPSLIGSITQELEAAYRQ----- 272
Query: 3190 MQCNETYWKQRSRVQWLQEGELN 3258
E +WKQ SRVQWL G+ N
Sbjct: 273 ---EELFWKQWSRVQWLNSGDRN 292
Score = 49.3 bits (116), Expect(2) = 2e-19
Identities = 27/101 (26%), Positives = 44/101 (43%)
Frame = +3
Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
+G+ F + G GGL L W+ N+++ +L A + +
Sbjct: 17 MGYAHRFTIPPEGLSGGLALYWKENVEVEILEAAPNFI---------------------- 54
Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
R W+ +S+ + WLL GDFN+IL+ EK+GG
Sbjct: 55 --DNRSVFWDKISSLGAQRSSAWLLTGDFNDILDNSEKQGG 93
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 169 bits (429), Expect = 8e-39
Identities = 86/251 (34%), Positives = 142/251 (56%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W FIE L KMGF K+ +++M CIT+V Y + NG I P RGLRQGDPLSPY+
Sbjct: 368 VEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYL 427
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
FILC E+L +N+ E+Q ++ I++ +P++ HL++ADD L C A+ + C + ++L
Sbjct: 428 FILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEIL 487
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
QY + Q IN KSSI +++ + ++ I SYLG+ G S
Sbjct: 488 KQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTK 547
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ + +R++ + GW +K +++ G+ V+IK+ + +VM +LP I +K+
Sbjct: 548 VFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVA 607
Query: 4026 DFFWGHDAQTR 4058
F+W + +R
Sbjct: 608 KFWWSSNGDSR 618
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 168 bits (426), Expect = 2e-38
Identities = 90/255 (35%), Positives = 138/255 (54%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W ++E ++KMGF ++ + ++ CI++V+Y + NGV IKPTRGLRQGDPLSPY+
Sbjct: 159 VEWNYLEKIMLKMGFSRRWVSLILCCISTVTYRVKVNGVLTEEIKPTRGLRQGDPLSPYL 218
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E SS L V E+ L+ I I NAPSI HL++ADD L+ A+ ++ LQ +L
Sbjct: 219 FLLCAEGFSSMLNVAEEAGRLQGISICANAPSITHLLFADDALLLLKANQENANYLQYVL 278
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q INK KSS++ Q T + + YLG+ GRS
Sbjct: 279 QVYEACSGQMINKDKSSVLFSKNTSQTSGDQFLSTLGLAQGVRTDRYLGLPVYMGRSRTQ 338
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
L +R+ ++ GW K +++AG+ LIK ++ M + + ++I +
Sbjct: 339 TFAYLKDRVWKRIHGWKEKLLSKAGKETLIKAVAQAIPSYAMACFDITKSVSDEISTMIC 398
Query: 4026 DFFWGHDAQTRKDRK 4070
F+W AQ K+ K
Sbjct: 399 RFWW---AQMEKENK 410
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 167 bits (423), Expect = 4e-38
Identities = 90/277 (32%), Positives = 148/277 (53%)
Frame = +3
Query: 3207 LLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCI 3386
++ +I S+ R+ + V + + ++W F+E T+ GF K+ ++M +
Sbjct: 172 MIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAV 231
Query: 3387 TSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIG 3566
SV YS+ NG H +I PTRG+RQGDPLSPY+FILC +ILS + V +R +RIG
Sbjct: 232 KSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIG 291
Query: 3567 KNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPE 3746
AP+I HL +ADD L C A+ ++C AL+ + Y Q IN KS I R+
Sbjct: 292 NGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGS 351
Query: 3747 LAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRL 3926
+L+ NIP YLG+ + GR + +++R++ + W +K ++ AG+
Sbjct: 352 TQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKE 411
Query: 3927 VLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFW 4037
+L+K+ + M +LP I ++I+ + +F+W
Sbjct: 412 ILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWW 448
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 166 bits (420), Expect = 8e-38
Identities = 91/246 (36%), Positives = 132/246 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+E L KMGF + VM+C+T+ S S+ NG P+RGLRQGDPLSP++
Sbjct: 1193 VEWNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFL 1252
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+ ++LS + + Q ++L + IG N + HL +ADD L A Q+C L LL
Sbjct: 1253 FLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLL 1312
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
H Y + Q IN KSSI P PE+A L IP S P +YLG+ RS
Sbjct: 1313 HTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKK 1372
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ + + I RK KGW ++QAG+ VLIK + + M + P + +++ I
Sbjct: 1373 ALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILA 1432
Query: 4026 DFFWGH 4043
DF+WG+
Sbjct: 1433 DFWWGN 1438
Score = 98.6 bits (244), Expect(2) = 2e-28
Identities = 67/220 (30%), Positives = 108/220 (49%)
Frame = +1
Query: 2602 KWKRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQ 2781
KW GG P + ++ +NN L DL F G ++W + G I ERLDR+L N
Sbjct: 752 KW---GGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGRVFIKERLDRALGNI 808
Query: 2782 QWLNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWE 2961
W + P I HLP+I SDH PLLL + ++ F+ E + H + +++ +SW
Sbjct: 809 AWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWP 868
Query: 2962 SSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELF 3141
++ + + N L AL W K F N PS+ + + ++ + + Q + P+
Sbjct: 869 PAFGGSAMRSWNRNLLSCGKALKMWSKEKFSN-PSV--QVADLLSDIEKL-HQSNPPDAH 924
Query: 3142 YWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
+ + Q ++ Q +E YW QRSRV WL+ G+ N+
Sbjct: 925 HQINILTD--QVTKLWTQ-DEMYWHQRSRVNWLKLGDQNS 961
Score = 57.4 bits (137), Expect(2) = 2e-28
Identities = 26/85 (30%), Positives = 48/85 (56%)
Frame = +3
Query: 2367 GLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDFNSIV 2546
GL L W +++S+L ++ + + + ++++ T +YG P+ ++ W S
Sbjct: 671 GLALFWGDAVQVSILDSSPNYVDTVVSFLSDAFVCKITWMYGNPHDNEKRAFWRLMYSRF 730
Query: 2547 PSHNHPWLLMGDFNEILNQMEKKGG 2621
P + PWL++GDFNE+L+ EK GG
Sbjct: 731 PVQSLPWLVLGDFNEVLDPSEKWGG 755
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 165 bits (418), Expect = 1e-37
Identities = 87/268 (32%), Positives = 143/268 (53%), Gaps = 1/268 (0%)
Frame = +3
Query: 3261 HCLLVHSKPISFFYC-LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFI 3437
HC + +S Y ++W F++ L + GF + + ++V+ C+TSVSYS NG +
Sbjct: 463 HCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKV 522
Query: 3438 KPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLI 3617
PTRGLRQGDPLSP +FILC E+LS ++ L +R+ N P + HL++ADD +
Sbjct: 523 VPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRVNHLLFADDTMF 582
Query: 3618 TCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQP 3797
+DP+SC L ++L +Y + Q+IN KSS+ + + Q++ I
Sbjct: 583 FSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVKRILKIRKEGGT 642
Query: 3798 PSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQA 3977
YLG+ GR + ++++I +K+ W S+ ++QAG+ V++K L+ + M
Sbjct: 643 GKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAVLASMPLYSMSC 702
Query: 3978 QQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
+LP + KI + F+W RK
Sbjct: 703 FKLPSALCRKIQSLLTRFWWDTKPDVRK 730
Score = 75.1 bits (183), Expect(2) = 1e-10
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
++RGG P + I+ NGL DL + G+P++W + + + +RLDR++SN W
Sbjct: 43 EKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRY-DWFVRQRLDRAMSNNSW 101
Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESS 2967
L P +L SDH PL++ +F+ ++ R + N +IQ +
Sbjct: 102 LESFPSGRSEYLRFEGSDHRPLVVFVDEARVKRRGQFRFDN-RLRDNDVVNALIQ---ET 157
Query: 2968 YSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP----E 3135
++ A++ K+N ++ W + N LI ++ + +A + + P
Sbjct: 158 WTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEA--LTADPPNPTTIGA 215
Query: 3136 LFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
L LEH + E +WKQRSRV WL G+ NT
Sbjct: 216 LTATLEH----------AYKLEEQFWKQRSRVLWLHSGDRNT 247
Score = 21.2 bits (43), Expect(2) = 1e-10
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3
Query: 2586 NEILNQMEKKGG 2621
NEIL+ EK+GG
Sbjct: 36 NEILDNSEKRGG 47
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 164 bits (416), Expect = 2e-37
Identities = 93/289 (32%), Positives = 154/289 (53%), Gaps = 3/289 (1%)
Frame = +3
Query: 3204 NLLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNC 3383
+L+ +I +M R ++ + + + ++WGF+ L+ MGF ++ N VM+C
Sbjct: 557 SLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSC 616
Query: 3384 ITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDI-- 3557
+ +VSYS NG + P+RGLRQGDPLSP++FIL + S +++Q+ V ++I
Sbjct: 617 VATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQ---MVKQKVVSKEIHG 673
Query: 3558 -RIGKNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPR 3734
+ +N P I HL++ADD L+ A Q CL + +L++Y + Q IN KS +
Sbjct: 674 AKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRG 733
Query: 3735 LDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQ 3914
+ E ++L ++ + YLGI GRS L ELL+R+ +K +GW K +++
Sbjct: 734 VSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSR 793
Query: 3915 AGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFWGHDAQTRK 4061
AG+ VLIK + ++M +LP + +I F+WG RK
Sbjct: 794 AGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERK 842
Score = 90.1 bits (222), Expect(3) = 4e-32
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Frame = +1
Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
+ V+++ L DL F G +TW + E+ I ERLDR + ++ WL+L P I H R
Sbjct: 163 RNVMDDCSLGDLRFVGQWHTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYC 222
Query: 2836 SDHAPLLLR---GSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKL 3006
SDHA ++LR + + F E L +V +W ++ + KL
Sbjct: 223 SDHAAIVLRCLGNEGMPRRRAGGFWFETFWLLDDTCEEVVRGAWNAA----EGGRICEKL 278
Query: 3007 NDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQM 3186
+A L W K TFG+L I A+E+ + AQ + + E LE E A
Sbjct: 279 GAVARELQGWSKKTFGSLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAK-- 336
Query: 3187 LMQCNETYWKQRSRVQWLQEGELNT 3261
NE YW RSRV +++G+ NT
Sbjct: 337 ----NEAYWYLRSRVAEVKDGDRNT 357
Score = 68.9 bits (167), Expect(3) = 4e-32
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +3
Query: 2316 SLGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQP-WLFTGIYG 2492
SLGF F +SC G GGLC+ W+ IS + + S H+ + +N W F GIYG
Sbjct: 50 SLGFSGAFGVSCVGRAGGLCMFWKEET-ISFRMVSFSQNHICGDVGSNGDVRWRFVGIYG 108
Query: 2493 PPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
P + + W + + P + GDFNEIL+ EK+GG
Sbjct: 109 WPEEENKHKTWALIKGLCDEYEGPIVFGGDFNEILSYDEKEGG 151
Score = 30.0 bits (66), Expect(3) = 4e-32
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 2170 MNCMAWNCQGTHNTLTIQKLREYTRKFKLDLLF 2268
M + WNCQG N T+++LR D LF
Sbjct: 1 MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLF 33
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 164 bits (415), Expect = 3e-37
Identities = 85/252 (33%), Positives = 135/252 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+ ++K+GF T + N +M C+++V+Y I NG P RGLRQGDPLSPY+
Sbjct: 840 VEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYL 899
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E S+ L E++ L IRI + APS+ HL++ADD LI C A+ LQ +L
Sbjct: 900 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 959
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q INK KS+++ P + + N+ + YLG+ GRS
Sbjct: 960 QIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTK 1019
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ L RI ++ +GW K +++AG+ +LIK M +L ++ ++I K+
Sbjct: 1020 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1079
Query: 4026 DFFWGHDAQTRK 4061
++W + + K
Sbjct: 1080 KYWWSNQEKDNK 1091
Score = 84.7 bits (208), Expect(2) = 1e-20
Identities = 57/228 (25%), Positives = 108/228 (47%), Gaps = 10/228 (4%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
+++GGR + + + + + GL DLGF GD +TW N+ E I ERLDR+++N +
Sbjct: 392 EKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIRERLDRAVANPE 451
Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
W + P + + SDH P+++ RG H+ F+ E + +
Sbjct: 452 WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 507
Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCS 3117
+V ++W+ S + + ++ L +A L W + G+L ++ +++ + +
Sbjct: 508 EVVKEAWDVS-AGLQGLPVHASLAGVAAGLSSWSSNVLGDLEKRVKKVKKELETCRR--Q 564
Query: 3118 QVSGPELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
+S ++ E+ R + L Q + YWKQR+ WL +G+ NT
Sbjct: 565 PISRDQVV----REEVLRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNT 608
Score = 45.4 bits (106), Expect(2) = 1e-20
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
+YG + + + W ++ + PWL+ GDFNEIL EK+GG+
Sbjct: 351 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGR 397
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 164 bits (415), Expect = 3e-37
Identities = 88/280 (31%), Positives = 148/280 (52%)
Frame = +3
Query: 3207 LLETKIESSMASRRGTQHHCLLVHSKPISFFYCLDWGFIEHTLIKMGFPTKFKNYVMNCI 3386
L+ ++ S+ SRR Q + V + + ++W F+E +I++GF ++ ++M C+
Sbjct: 913 LVAHELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCV 972
Query: 3387 TSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYIFILCVEILSSNLGVLEQQAVLRDIRIG 3566
TSVSY + NG + I P+RG+RQGDPLSPY+F+ C E+LS+ L E + ++I
Sbjct: 973 TSVSYEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKIT 1032
Query: 3567 KNAPSILHLMYADDLLITCNADPQSCLALQQLLHQYSTSVRQAINKGKSSIIHHPRLDPE 3746
K+ +I HL++ADD L C A Q+ L + +Y + Q IN KSSII ++
Sbjct: 1033 KDCLAISHLLFADDSLFFCRASNQNIEQLALIFKKYEEASGQKINYAKSSIIFGQKIPTM 1092
Query: 3747 LAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAHLIVELLNRIERKAKGWISKCVNQAGRL 3926
Q+L I YLG+ + GR L ++ +++ + +GW ++ AG+
Sbjct: 1093 RRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKVELFEYIVTKVKERTEGWAYNYLSPAGKE 1152
Query: 3927 VLIKTALSPTTNHVMQAQQLPCEIHNKIDKITRDFFWGHD 4046
++IK + M LP I N+I+ + F+WG +
Sbjct: 1153 IVIKAIAMALPVYSMNCFLLPTLICNEINSLITAFWWGKE 1192
Score = 77.8 bits (190), Expect(3) = 7e-30
Identities = 39/102 (38%), Positives = 58/102 (56%)
Frame = +3
Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
+GF D +S G GGL + W+ +L I V+ + L+ +Y+E N + + + IYG P
Sbjct: 413 MGFEDMCIISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFN--FYLSCIYGHP 470
Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
P R +LW + + PW++ GDFNEILN EKKGG+
Sbjct: 471 IPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGR 512
Score = 67.0 bits (162), Expect(3) = 7e-30
Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 4/231 (1%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
+++GGR I +IN + DL G+PY+W + E I LDR N W
Sbjct: 507 EKKGGRRRSIGSLQNFTNMINCCNMKDLKSKGNPYSWVGKRQNET-IESCLDRVFINSDW 565
Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKK--FKLEHLRFLHPQMRNIVIQSWE 2961
P LP SDHAP+++ +K+ F+ + F + V + W
Sbjct: 566 QASFPAFETEFLPIAGSDHAPVII--DIAEEVCTKRGQFRYDRRHFQFEDFVDSVQRGWN 623
Query: 2962 SSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELF 3141
S + KL+ L +WK+ T N T + +++ +V E
Sbjct: 624 RGRSDSH-GGYYEKLHCCRQELAKWKRRTKTN----------TAEKIETLKYRVDAAERD 672
Query: 3142 YWLEHEK--QYRQAHQMLMQCNETYWKQRSRVQWLQEGELNTIAY*STQNL 3288
+ L H+ + RQ + E YW +SR +W+ G+ NT+ + ++ L
Sbjct: 673 HTLPHQTILRLRQDLNQAYRDEELYWHLKSRNRWMLLGDRNTMFFYASTKL 723
Score = 36.6 bits (83), Expect(3) = 7e-30
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 2185 WNCQGTHNTLTIQKLREYTRKFKLDLLFFV 2274
WNCQG LT+++L E R + LD+LF +
Sbjct: 368 WNCQGLGQPLTVRRLEEVQRVYFLDMLFLI 397
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 164 bits (414), Expect = 4e-37
Identities = 85/252 (33%), Positives = 134/252 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+ ++K+GF T + N +M C+++V+Y I NG P RGLRQGDPLSPY+
Sbjct: 813 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 872
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E S+ L E++ L IRI + APS+ HL++ADD LI C A+ LQ +L
Sbjct: 873 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 932
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q INK KS+++ P + N+ + YLG+ GRS
Sbjct: 933 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 992
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ L RI ++ +GW K +++AG+ +LIK M +L ++ ++I K+
Sbjct: 993 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIA 1052
Query: 4026 DFFWGHDAQTRK 4061
++W + + K
Sbjct: 1053 KYWWSNQEKDNK 1064
Score = 58.9 bits (141), Expect(2) = 5e-12
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
+++ GR + + + + + GL DLGF GD +TW N+ E I E LDR+++N +
Sbjct: 440 EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 499
Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
W + P + + SDH P+++ RG H+ F+ E + +
Sbjct: 500 WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 555
Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
+V ++W+ S + + ++ L +A L W + G+L ++ +++ +
Sbjct: 556 EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 606
Score = 42.0 bits (97), Expect(2) = 5e-12
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
+YG + + + W ++ + PWL+ GDFNEIL EK+ G+
Sbjct: 399 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 445
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 164 bits (414), Expect = 4e-37
Identities = 83/244 (34%), Positives = 135/244 (55%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+E T+ GF K+ ++M + SV YS+ NG H +I PTRG+RQGDPLSPY+
Sbjct: 740 VEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYL 799
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
FILC +ILS + LR +RIG AP+I HL +ADD L C A+ ++C AL+ +
Sbjct: 800 FILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVF 859
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q IN KS I R+ +L+ IP YLG+ + GR
Sbjct: 860 DVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGGGGKYLGLPEQFGRKKKE 919
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ +++R++++ W ++ ++ AG+ +++K+ + M +LP I ++I+ +
Sbjct: 920 MFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLM 979
Query: 4026 DFFW 4037
+F+W
Sbjct: 980 NFWW 983
Score = 75.1 bits (183), Expect(2) = 3e-23
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +3
Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
LGF + NG GGL L+W+ N+ +S++ ++ L+ ++ N++ + + +YG P
Sbjct: 206 LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHV--TFNNKSFYLSCVYGHP 263
Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
R LW I + N WLL+GDFNEIL+ EK GG
Sbjct: 264 TQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGG 304
Score = 63.5 bits (153), Expect(2) = 3e-23
Identities = 46/202 (22%), Positives = 90/202 (44%)
Frame = +1
Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
+ ++++ + D+ GD ++W + V LDR N W P L
Sbjct: 316 RNMVSHCDIEDMRSKGDRFSWVGERHTHTVKC-CLDRVFINSAWTATFPYAETEFLDFTG 374
Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
SDH P+L+ + SK F+ ++ P + IV SW ++ + +R + +++
Sbjct: 375 SDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRN-SRSTPITERISSC 433
Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQMLMQ 3195
A+ + K ++ N I+ ++ ++ +A +V + Q +++
Sbjct: 434 RQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI-------PQLQESLAKAFS 486
Query: 3196 CNETYWKQRSRVQWLQEGELNT 3261
E YWKQ+SR QW++EG+ NT
Sbjct: 487 DEEIYWKQKSRNQWMKEGDQNT 508
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 164 bits (414), Expect = 4e-37
Identities = 83/244 (34%), Positives = 135/244 (55%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+E T+ GF K+ ++M + SV YS+ NG H +I PTRG+RQGDPLSPY+
Sbjct: 966 VEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYL 1025
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
FILC +ILS + LR +RIG AP+I HL +ADD L C A+ ++C AL+ +
Sbjct: 1026 FILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVF 1085
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q IN KS I R+ +L+ IP YLG+ + GR
Sbjct: 1086 DVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKE 1145
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ +++R++++ W ++ ++ AG+ +++K+ + M +LP I ++I+ +
Sbjct: 1146 MFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLM 1205
Query: 4026 DFFW 4037
+F+W
Sbjct: 1206 NFWW 1209
Score = 75.1 bits (183), Expect(2) = 9e-24
Identities = 36/101 (35%), Positives = 56/101 (55%)
Frame = +3
Query: 2319 LGFYDCFALSCNGHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPP 2498
LGF + NG GGL L+W+ N+ +S++ ++ L+ ++ N++ + + +YG P
Sbjct: 432 LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHV--TFNNKSFYLSCVYGHP 489
Query: 2499 NPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
R LW I + N WLL+GDFNEIL+ EK GG
Sbjct: 490 TQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGG 530
Score = 65.5 bits (158), Expect(2) = 9e-24
Identities = 47/202 (23%), Positives = 91/202 (45%)
Frame = +1
Query: 2656 KEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQWLNLHPRMTIHHLPRIA 2835
+ ++++ + D+ GD ++W + V LDR N W P I L
Sbjct: 542 RNMVSHCDIEDMRSKGDRFSWVGERHTHTVKC-CLDRVFINSAWTATFPYAEIEFLDFTG 600
Query: 2836 SDHAPLLLRGSFIHHPISKKFKLEHLRFLHPQMRNIVIQSWESSYSPTRPANLNMKLNDI 3015
SDH P+L+ + SK F+ ++ P + IV SW ++ + +R + +++
Sbjct: 601 SDHKPVLVHFNESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRN-SRSTPITERISSC 659
Query: 3016 ATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGPELFYWLEHEKQYRQAHQMLMQ 3195
A+ + K ++ N I+ ++ ++ +A +V + Q +++
Sbjct: 660 RQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLI-------PQLQESLAKAFS 712
Query: 3196 CNETYWKQRSRVQWLQEGELNT 3261
E YWKQ+SR QW++EG+ NT
Sbjct: 713 DEEIYWKQKSRNQWMKEGDQNT 734
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 163 bits (413), Expect = 5e-37
Identities = 85/252 (33%), Positives = 134/252 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+ ++K+GF T + N +M C+++V+Y I NG P RGLRQGDPLSPY+
Sbjct: 785 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 844
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E S+ L E++ L IRI + APS+ HL++ADD LI C A+ LQ +L
Sbjct: 845 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 904
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q INK KS+++ P + N+ + YLG+ GRS
Sbjct: 905 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 964
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ L RI ++ +GW K +++AG+ +LIK M +L ++ ++I K+
Sbjct: 965 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1024
Query: 4026 DFFWGHDAQTRK 4061
++W + + K
Sbjct: 1025 KYWWSNQEKDNK 1036
Score = 58.9 bits (141), Expect(2) = 5e-12
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
+++ GR + + + + + GL DLGF GD +TW N+ E I E LDR+++N +
Sbjct: 437 EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 496
Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
W + P + + SDH P+++ RG H+ F+ E + +
Sbjct: 497 WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 552
Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
+V ++W+ S + + ++ L +A L W + G+L ++ +++ +
Sbjct: 553 EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 603
Score = 42.0 bits (97), Expect(2) = 5e-12
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
+YG + + + W ++ + PWL+ GDFNEIL EK+ G+
Sbjct: 396 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 442
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 163 bits (413), Expect = 5e-37
Identities = 85/252 (33%), Positives = 134/252 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+ ++K+GF T + N +M C+++V+Y I NG P RGLRQGDPLSPY+
Sbjct: 781 VEWSFLHDMMLKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYL 840
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E S+ L E++ L IRI + APS+ HL++ADD LI C A+ LQ +L
Sbjct: 841 FLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTIL 900
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y Q INK KS+++ P + N+ + YLG+ GRS
Sbjct: 901 QIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTK 960
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
+ L RI ++ +GW K +++AG+ +LIK M +L ++ ++I K+
Sbjct: 961 IFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIA 1020
Query: 4026 DFFWGHDAQTRK 4061
++W + + K
Sbjct: 1021 KYWWSNQEKDNK 1032
Score = 58.9 bits (141), Expect(2) = 5e-12
Identities = 40/172 (23%), Positives = 81/172 (47%), Gaps = 10/172 (5%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLG-ENVILERLDRSLSNQQ 2784
+++ GR + + + + + GL DLGF GD +TW N+ E I E LDR+++N +
Sbjct: 433 EKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQEGYIREWLDRAVANPE 492
Query: 2785 WLNLHPRMTIHHLPRIASDHAPLLL---------RGSFIHHPISKKFKLEHLRFLHPQMR 2937
W + P + + SDH P+++ RG H+ F+ E + +
Sbjct: 493 WRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHN----DFRFEAAWLEEEKFK 548
Query: 2938 NIVIQSWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETI 3093
+V ++W+ S + + ++ L +A L W + G+L ++ +++ +
Sbjct: 549 EVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVKKEL 599
Score = 42.0 bits (97), Expect(2) = 5e-12
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 2484 IYGPPNPQARKNLWNDFNSIVPSHNHPWLLMGDFNEILNQMEKKGGK 2624
+YG + + + W ++ + PWL+ GDFNEIL EK+ G+
Sbjct: 392 LYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGR 438
>ref|XP_007203452.1| hypothetical protein PRUPE_ppa022115mg [Prunus persica]
gi|462398983|gb|EMJ04651.1| hypothetical protein
PRUPE_ppa022115mg [Prunus persica]
Length = 1755
Score = 162 bits (411), Expect = 9e-37
Identities = 84/252 (33%), Positives = 134/252 (53%)
Frame = +3
Query: 3306 LDWGFIEHTLIKMGFPTKFKNYVMNCITSVSYSINFNGVAHAFIKPTRGLRQGDPLSPYI 3485
++W F+E ++ MGFP + VM+C+T+VSYS NG + PTRGLRQGDPLSPY+
Sbjct: 1002 VEWEFLEKMMLAMGFPILWVRMVMDCVTTVSYSFLVNGEPTRILYPTRGLRQGDPLSPYL 1061
Query: 3486 FILCVEILSSNLGVLEQQAVLRDIRIGKNAPSILHLMYADDLLITCNADPQSCLALQQLL 3665
F+LC E ++ L E+Q L+ I I + AP++ HL +ADD + A +C L+ +
Sbjct: 1062 FLLCAEGFTTLLSKAERQGQLQGIVICRGAPTVSHLFFADDSFVFAKATDNNCGVLKHIF 1121
Query: 3666 HQYSTSVRQAINKGKSSIIHHPRLDPELAQQLQHTFNIPTTSQPPSYLGIQFRRGRSSAH 3845
Y + Q IN KS + + + +L +P +YLG+ GR+
Sbjct: 1122 EVYEHASGQQINCQKSCVAFSANIHMDTQSRLASVLGVPRVDSHATYLGLPMMLGRNKTV 1181
Query: 3846 LIVELLNRIERKAKGWISKCVNQAGRLVLIKTALSPTTNHVMQAQQLPCEIHNKIDKITR 4025
L R+ +K +GW + ++ AG+ VL+K +VM LP + ++I+++
Sbjct: 1182 CFRYLKERVWKKLQGWREQTLSIAGKEVLLKVVAQSIPLYVMSCFLLPQGLCHEIEQMMA 1241
Query: 4026 DFFWGHDAQTRK 4061
F+WG + RK
Sbjct: 1242 RFWWGQQGENRK 1253
Score = 104 bits (259), Expect(2) = 4e-32
Identities = 68/223 (30%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Frame = +1
Query: 2608 KRRGGRPVCINQGNRLKEVINNNGLIDLGFHGDPYTWSNNQLGENVILERLDRSLSNQQW 2787
++ GG Q + +++ G DLGF+G +TW + G+ + RLDR+L+ W
Sbjct: 558 EKEGGPLRNNRQMQGFRNIVDKLGFRDLGFNGYKFTWKC-RFGDGFVRVRLDRALATTSW 616
Query: 2788 LNLHPRMTIHHLPRIASDHAPLLLRGSFIHHPISKK-----FKLEHLRFLHPQMRNIVIQ 2952
NL P ++ HL SDH P+L+R I H +K F E + H + Q
Sbjct: 617 QNLFPGFSVQHLDPSRSDHLPILVR---IRHATCQKSRYRRFHFEAMWTTHVDCEKTIKQ 673
Query: 2953 SWESSYSPTRPANLNMKLNDIATALLQWKKSTFGNLPSLIRAMEETIAQAQSMCSQVSGP 3132
WES + L+ K+ + L +W KSTFG++ EET + S P
Sbjct: 674 VWESVGNLDPMVGLDKKIKQMTWVLQRWSKSTFGHI------KEETRVLRAKLASLFQAP 727
Query: 3133 ELFYWLEHEKQYRQAHQMLMQCNETYWKQRSRVQWLQEGELNT 3261
E + +++ L+ NE YW QRSR WL+ G+ NT
Sbjct: 728 YSERVEEDRRVVQKSLDELLAKNELYWCQRSRENWLKAGDKNT 770
Score = 64.3 bits (155), Expect(2) = 4e-32
Identities = 32/89 (35%), Positives = 45/89 (50%)
Frame = +3
Query: 2355 GHKGGLCLLWRTNLKISVLVANQSLLHVYIEPVNNSQPWLFTGIYGPPNPQARKNLWNDF 2534
G+ GGL LLW+ + + V + + V I W T YG P Q R+ W
Sbjct: 474 GYSGGLALLWKEEVDVHVCAFSDHFIDVQIGSNGGGDRWRLTVFYGFPAVQDREKSWILL 533
Query: 2535 NSIVPSHNHPWLLMGDFNEILNQMEKKGG 2621
+ + + PWL +GDFNEIL+ EK+GG
Sbjct: 534 DQLGHHNQLPWLCVGDFNEILSTDEKEGG 562