BLASTX nr result

ID: Papaver27_contig00004201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00004201
         (1262 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4,...    60   2e-06
ref|XP_002300943.1| hypothetical protein POPTR_0002s07330g [Popu...    60   3e-06
ref|XP_004290590.1| PREDICTED: psbP domain-containing protein 4,...    59   4e-06
gb|ABK96683.1| unknown [Populus trichocarpa x Populus deltoides]       59   6e-06

>ref|XP_002265695.1| PREDICTED: psbP domain-containing protein 4, chloroplastic [Vitis
            vinifera] gi|302142754|emb|CBI19957.3| unnamed protein
            product [Vitis vinifera]
          Length = 279

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 38/78 (48%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = +2

Query: 1040 SRTKASLDSNEDRYCVNV----NEKNNGFLKRREAXXXXXXXXXXXXXXXXFPSDGLAVI 1207
            S  KA++D+ ++  CV       EK +GFLKRR A                FP +GLAV+
Sbjct: 36   SVAKAAVDTRQNG-CVEFVDEETEKFSGFLKRRSAIVSGVSLISSAVLG--FPREGLAVV 92

Query: 1208 KQGLLAGRVPGLSDPDEQ 1261
            KQGLLAGRVPGLS+PDEQ
Sbjct: 93   KQGLLAGRVPGLSEPDEQ 110


>ref|XP_002300943.1| hypothetical protein POPTR_0002s07330g [Populus trichocarpa]
            gi|222842669|gb|EEE80216.1| hypothetical protein
            POPTR_0002s07330g [Populus trichocarpa]
          Length = 276

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 32/76 (42%), Positives = 44/76 (57%)
 Frame = +2

Query: 1034 YSSRTKASLDSNEDRYCVNVNEKNNGFLKRREAXXXXXXXXXXXXXXXXFPSDGLAVIKQ 1213
            + SR K + +S ++ +    NEK+ GFLKRR                     +GLAV+KQ
Sbjct: 34   FPSRAKITAESRKNGFLDGENEKSAGFLKRRSVLVSGVSLVSTSVLGSA--GEGLAVVKQ 91

Query: 1214 GLLAGRVPGLSDPDEQ 1261
            GLLAGR+PGLS+PD+Q
Sbjct: 92   GLLAGRIPGLSEPDDQ 107


>ref|XP_004290590.1| PREDICTED: psbP domain-containing protein 4, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 276

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 36/72 (50%), Positives = 39/72 (54%)
 Frame = +2

Query: 1046 TKASLDSNEDRYCVNVNEKNNGFLKRREAXXXXXXXXXXXXXXXXFPSDGLAVIKQGLLA 1225
            TK+   S E        EK +G LKRR                  FP DGLAVIKQGLLA
Sbjct: 38   TKSEASSREYGVLNGEAEKVSGILKRRSVVLSGASLVSSAVLG--FPGDGLAVIKQGLLA 95

Query: 1226 GRVPGLSDPDEQ 1261
            GRVPGLS+PDEQ
Sbjct: 96   GRVPGLSEPDEQ 107


>gb|ABK96683.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 119

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 32/76 (42%), Positives = 44/76 (57%)
 Frame = +2

Query: 1034 YSSRTKASLDSNEDRYCVNVNEKNNGFLKRREAXXXXXXXXXXXXXXXXFPSDGLAVIKQ 1213
            +SSR K + +S ++ +    NEK+  FLKRR                     +GLAV+KQ
Sbjct: 34   FSSRAKITAESRKNGFLDGENEKSAWFLKRRSVLVSGVSLVSTSVLGSA--GEGLAVVKQ 91

Query: 1214 GLLAGRVPGLSDPDEQ 1261
            GLLAGR+PGLS+PD+Q
Sbjct: 92   GLLAGRIPGLSEPDDQ 107


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