BLASTX nr result
ID: Papaver27_contig00004126
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00004126 (2655 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp... 744 0.0 emb|CBI34982.3| unnamed protein product [Vitis vinifera] 716 0.0 ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun... 699 0.0 ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron sp... 698 0.0 ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The... 695 0.0 ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The... 695 0.0 ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron sp... 690 0.0 ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp... 679 0.0 gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus... 671 0.0 ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp... 669 0.0 ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [A... 667 0.0 ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp... 667 0.0 ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp... 665 0.0 ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp... 662 0.0 ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp... 653 0.0 ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|2... 649 0.0 ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr... 647 0.0 ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron sp... 645 0.0 ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron sp... 645 0.0 gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana] 642 0.0 >ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Vitis vinifera] Length = 1044 Score = 744 bits (1922), Expect = 0.0 Identities = 427/830 (51%), Positives = 536/830 (64%), Gaps = 8/830 (0%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGV 182 YFL+ N + + S + S N+ K VKS P+ +N+ A +L++GV Sbjct: 277 YFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGV 336 Query: 183 GSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRL 362 G P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +PLPIDADLLPA+VPGYRRPFRL Sbjct: 337 GYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRL 396 Query: 363 LPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRG 542 LPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQGLAAS++KLWEKCEIAKIAVKRG Sbjct: 397 LPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRG 456 Query: 543 VQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHT 722 VQNTNS MMAEELK LTGGTLLSRD+EFI YRGKDFLPPAVS+AIE RRK IHR K Sbjct: 457 VQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQK 516 Query: 723 THGH------SSTEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTV 884 H +E+ S + ++ + S+ K R +S AV+E T+ KL Sbjct: 517 IDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMA 576 Query: 885 XXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGT 1064 ++PE+D+EG+TEEERYML+KVGLRMKPFLLLGRRG+FDGT Sbjct: 577 LEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGT 636 Query: 1065 IENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKN 1244 +ENMHLHWKYRELVKI+++ R ED++GVA+TLEAESGGILVAVERV +GYAII+YRGKN Sbjct: 637 VENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKN 696 Query: 1245 YQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKIN 1424 Y+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L +NID+ + Sbjct: 697 YKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDE--------------LK 742 Query: 1425 HEPLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVKPQI 1604 H+ VS++K D E N +K R + Sbjct: 743 HQ---------------LVSRIK----DKETNSKQLVDKSR--------------LHLAR 769 Query: 1605 QKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYE-EFDNTDL 1781 ++ V S M++ S D L + +H +K +++ + + D + Sbjct: 770 ERYGADVILIHSSDGMDS------------SRDSL-QTSHNDKRIDFPSMCDSDTDEANP 816 Query: 1782 ESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAAC-AVTDKAEGYAXXXXXXXXX 1958 E E V++EI + + E + ++ QG+ +C A+ + E Sbjct: 817 EPSSESVLKEIETNVLTDMNEEGECTTCSEDLVSQGETSCYAIVNHEE-------TMESS 869 Query: 1959 XXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVV 2138 KN+ + VQ + R S + FRA PLSNRERL+LRKQAL MK+RPV+A+GRSN+V Sbjct: 870 VKSSKNEFKPPVQRPVDTR-SNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIV 928 Query: 2139 TGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWE 2318 TGVAK IK HFQK+ LAIVNVKGRAKGTS+QE++FKLE+ATGAV+VSQEP+KVILYRGW Sbjct: 929 TGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWG 988 Query: 2319 EGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 E+ R K S+GR + VSPEL AAIRLECGL S+++ Sbjct: 989 AREENGRSYRMNRSDARKTSAGREGGPRPTVSPELRAAIRLECGLKSNQD 1038 >emb|CBI34982.3| unnamed protein product [Vitis vinifera] Length = 1028 Score = 716 bits (1849), Expect = 0.0 Identities = 410/790 (51%), Positives = 513/790 (64%), Gaps = 11/790 (1%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGV 182 YFL+ N + + S + S N+ K VKS P+ +N+ A +L++GV Sbjct: 277 YFLSDNNLPNDSSHDASSDSQMNNEEHDGKEVCSSGKGDVKSAGPMPANKIAPLSLIQGV 336 Query: 183 GSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRL 362 G P +VRF LPGEAQ+ EEADR+LDGLGPRF DWWG +PLPIDADLLPA+VPGYRRPFRL Sbjct: 337 GYPTRVRFQLPGEAQLEEEADRLLDGLGPRFTDWWGYDPLPIDADLLPAVVPGYRRPFRL 396 Query: 363 LPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRG 542 LPYG+KPKLT+DEMT+LRRLGRPLPCHFALGRN+ LQGLAAS++KLWEKCEIAKIAVKRG Sbjct: 397 LPYGLKPKLTNDEMTVLRRLGRPLPCHFALGRNRKLQGLAASMIKLWEKCEIAKIAVKRG 456 Query: 543 VQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHT 722 VQNTNS MMAEELK LTGGTLLSRD+EFI YRGKDFLPPAVS+AIE RRK IHR K Sbjct: 457 VQNTNSEMMAEELKNLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEARRKYGIHRGKQK 516 Query: 723 THGH------SSTEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTV 884 H +E+ S + ++ + S+ K R +S AV+E T+ KL Sbjct: 517 IDHHRLAINAEESELGTSEHASDKDCDGTDDQKTNSLSKRRMLRSAEAVVERTNIKLSMA 576 Query: 885 XXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGT 1064 ++PE+D+EG+TEEERYML+KVGLRMKPFLLLGRRG+FDGT Sbjct: 577 LEKKERAEKLLAELEEAQIPQQPEIDKEGITEEERYMLRKVGLRMKPFLLLGRRGIFDGT 636 Query: 1065 IENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKN 1244 +ENMHLHWKYRELVKI+++ R ED++GVA+TLEAESGGILVAVERV +GYAII+YRGKN Sbjct: 637 VENMHLHWKYRELVKIISNGRSIEDIHGVARTLEAESGGILVAVERVSKGYAIIMYRGKN 696 Query: 1245 YQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKIN 1424 Y+RPA LRPQTLLNK++A+KRSLEAQR ESLKLHVL+L +NID+ + Sbjct: 697 YKRPASLRPQTLLNKREALKRSLEAQRRESLKLHVLRLTRNIDE--------------LK 742 Query: 1425 HEPLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVKPQI 1604 H+ VS++K D E N +K R + Sbjct: 743 HQ---------------LVSRIK----DKETNSKQLVDKSR--------------LHLAR 769 Query: 1605 QKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYE-EFDNTDL 1781 ++ V S M++ S D L + +H +K +++ + + D + Sbjct: 770 ERYGADVILIHSSDGMDS------------SRDSL-QTSHNDKRIDFPSMCDSDTDEANP 816 Query: 1782 ESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAAC-AVTDKAEGYAXXXXXXXXX 1958 E E V++EI + + E + ++ QG+ +C A+ + E Sbjct: 817 EPSSESVLKEIETNVLTDMNEEGECTTCSEDLVSQGETSCYAIVNHEE-------TMESS 869 Query: 1959 XXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVV 2138 KN+ + VQ + R S + FRA PLSNRERL+LRKQAL MK+RPV+A+GRSN+V Sbjct: 870 VKSSKNEFKPPVQRPVDTR-SNEMPFRAAPLSNRERLLLRKQALRMKKRPVIAVGRSNIV 928 Query: 2139 TGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGW- 2315 TGVAK IK HFQK+ LAIVNVKGRAKGTS+QE++FKLE+ATGAV+VSQEP+KVILYRGW Sbjct: 929 TGVAKTIKAHFQKHPLAIVNVKGRAKGTSVQEVIFKLEQATGAVLVSQEPSKVILYRGWG 988 Query: 2316 --EEGGEDPR 2339 EE G R Sbjct: 989 AREENGRSYR 998 >ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica] gi|462413233|gb|EMJ18282.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica] Length = 1117 Score = 699 bits (1805), Expect = 0.0 Identities = 429/887 (48%), Positives = 539/887 (60%), Gaps = 68/887 (7%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVS-LPNG--NDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALV 173 YFL +D++ D + LP+ NDG+ N + + + +P +N A LV Sbjct: 254 YFLRDKVDEDSTIDTSHNALPDAHINDGI------NEISNEVNSAIIPSTTNERAQPMLV 307 Query: 174 KGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRP 353 KGVG ++VRF LPGEAQ+ EEAD ML+GLGPRF DWWG EPLP+DADLLPAIVPGYR+P Sbjct: 308 KGVGLQDRVRFQLPGEAQLTEEADHMLEGLGPRFTDWWGYEPLPVDADLLPAIVPGYRKP 367 Query: 354 FRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAV 533 FRLLPYG+KPKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA+SIVKLWEKCEIAKIAV Sbjct: 368 FRLLPYGLKPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLASSIVKLWEKCEIAKIAV 427 Query: 534 KRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRD 713 KRGVQNTN+ +MAEELKRLTGGTLL+RD+EFI LYRGKDFLPPAVS+AIE+RRK IH + Sbjct: 428 KRGVQNTNTEIMAEELKRLTGGTLLARDREFIVLYRGKDFLPPAVSSAIEERRKYAIHAE 487 Query: 714 KH-TTHGHSST---EISPSLASKAENSTSAGEFHEKSV-RKERKPKSTNAVMENTSSKLF 878 K HG S T E+ P ++ EN H+ + +RK KS V+ TS KL Sbjct: 488 KQIAEHGTSVTTRQELEP--RTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLS 545 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 ++PE+D+EG+T+EERYML+KVGLRMKPFLL+GRRGVFD Sbjct: 546 MALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFD 605 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GTIENMHLHWKYRELVKI+ + + E V VA+TLEAESGGILVAVERV +GYAIIVYRG Sbjct: 606 GTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRG 665 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDD-XXXXXXXXXXXNC 1415 KNY RPA LRPQTLLNK++AMKRS+EAQR ESLKLHVL+L +NID+ N Sbjct: 666 KNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKDKEADNL 725 Query: 1416 KINHEPLTEQQRERTQFEVAQVS---------QVKEESEDLEINHVSSTEKQRETTQFKT 1568 + E E R++ + V V+ + ++ E+ SST + E +FK Sbjct: 726 QSVGESRNELARDKQEAHVTPVNLNDGMGAVVNGQLATQQDEVISFSSTWDEDEIGKFKP 785 Query: 1569 SDSLGSVVK-----------------------------------------PQIQKNAGSV 1625 S SV P+ AG + Sbjct: 786 GSSNESVTNEEDEIGKVEPGPSNESVTNETPANFLKDTNGEVGDFVSTCFPEDVMPAGVI 845 Query: 1626 E------FTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLE- 1784 F EAHV+ + ++ + + T +K++ ++ E +N ++E Sbjct: 846 SEIVHVLFFKGRGKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITFSSICCEDENGEVEP 905 Query: 1785 -SKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAV-TDKAEGYAXXXXXXXXX 1958 S E V E H+ F++ + G+ ++ T E Sbjct: 906 ISSSEPVTNETHANLFRD---------------VNGEEGVSISTSFPEDAMAKDSSGRFG 950 Query: 1959 XXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVV 2138 + + V+ D +R K V LSN ERL+LRKQAL MK+RPVLA+GR+N+V Sbjct: 951 NSESEPSVPVMVRKDFNERPLKSVH-----LSNGERLLLRKQALKMKKRPVLAVGRNNIV 1005 Query: 2139 TGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWE 2318 +GVAK IK HF+K+ LAIVNVKGRAKGTS++E+V KLE+ATG V+VSQEP+KVILYRGW Sbjct: 1006 SGVAKTIKAHFEKHPLAIVNVKGRAKGTSVREVVLKLEQATGGVLVSQEPSKVILYRGWG 1065 Query: 2319 EGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLAS 2459 G++ R K KK S + VSPEL+AAIRLECG S Sbjct: 1066 AAGDNDR----KASNTRKKVS-----TQGAVSPELLAAIRLECGFKS 1103 >ref|XP_004232267.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Solanum lycopersicum] Length = 1049 Score = 698 bits (1802), Expect = 0.0 Identities = 403/810 (49%), Positives = 515/810 (63%), Gaps = 19/810 (2%) Frame = +3 Query: 96 TNLVCTDSVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRF 275 TN D+VKS S+R++ +++GVGSP++VRF LPGEA+ EEAD++L+GLGPRF Sbjct: 291 TNSSGIDAVKSD---ASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEGLGPRF 347 Query: 276 IDWWGVEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALG 455 DWWG EPLPIDADLLPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPCHF LG Sbjct: 348 TDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPCHFVLG 407 Query: 456 RNKNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIAL 635 RN+ LQGLAA+IVKLWEKCEIAK+AVKRGVQNTNS +M EELK LTGGTLLSRD+EFI Sbjct: 408 RNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMVEELKWLTGGTLLSRDREFIVF 467 Query: 636 YRGKDFLPPAVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEFH---E 806 YRGKDFLP AVS+AIE+RRK +K S S E+ + G H + Sbjct: 468 YRGKDFLPSAVSSAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTESVSDDGHAHRNNQ 527 Query: 807 KSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEE 986 K V++++K S A ++ T+ KL T ++ ++D+EG+TEEE Sbjct: 528 KGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAEKLLLELEEDEVPQQSDMDKEGITEEE 587 Query: 987 RYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLE 1166 R+ML+K+GLRMKPFLLLGRRGVFDGT+ENMHLHWKYRELVK++ + E+V+ +A+ LE Sbjct: 588 RFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKNIEEVHQIARMLE 647 Query: 1167 AESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLH 1346 AESGGILVAVERV++GYAIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR +SLKLH Sbjct: 648 AESGGILVAVERVNKGYAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQSLKLH 707 Query: 1347 VLKLAQNIDDXXXXXXXXXXXNCKINHEPLTEQQRERTQFEVAQVSQVKEESEDLEINHV 1526 VLKL QNI E Q K E EI+H+ Sbjct: 708 VLKLTQNI--------------------------------EALQSRLAKNE----EISHI 731 Query: 1527 SSTE-KQRETTQFKTSDSLG-----SVVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPS 1688 S + R+ SD+ G S+V I+ + + E TD E L++ S Sbjct: 732 QSPDIVDRQVPVMGISDAAGGTNYQSIVASPIEDSGDAAEDTDPSSQKE-----LSNDFS 786 Query: 1689 DQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLESKPEEV--VREIHSV--------NFQEK 1838 D D +++ + Y + E +T ++ + + + ++E S+ F Sbjct: 787 DTDHDS-QQEFPINPFFQYEGKVEAMGDT-IQPQHQSISSIKESKSMFNVNVDQETFGSA 844 Query: 1839 LERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXXXXXXXXXRKNQLESSVQGDKEQRG 2018 + S RG V++ + E + Q S + Sbjct: 845 VSESVSKSSRGEVKIHFSETRSFNKPRE--VNNKMEVSQPPPVKPQQTLRSTRS-----R 897 Query: 2019 SKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVN 2198 S+G+ R LSNRERL+LRKQAL MK++PVLA+GRSN+VTGVAK IK HF+K LAIVN Sbjct: 898 SEGMSTRRVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLAIVN 957 Query: 2199 VKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKS 2378 VKGRAKGTS++E+VFKLE+ATGAV+VSQEP+KVILYRGW GGE G + G S Sbjct: 958 VKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGE---RGASNGNDTSNSK 1014 Query: 2379 SGRVARNKNVVSPELMAAIRLECGLASSKE 2468 + R + +SPEL++AIRLECGL S+ + Sbjct: 1015 NSREQKELMSISPELISAIRLECGLQSNND 1044 >ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao] gi|508710385|gb|EOY02282.1| CRM family member 2, putative isoform 2 [Theobroma cacao] Length = 1045 Score = 695 bits (1793), Expect = 0.0 Identities = 407/839 (48%), Positives = 535/839 (63%), Gaps = 17/839 (2%) Frame = +3 Query: 3 YFLTTN-TIDDTSGDELVSLPNGN-DGVTVDKATNLVCT-DSVKSGLPIVSNREAGKALV 173 YFL DDTS + + P+ N D V + + + +S K+ +P +N+ +V Sbjct: 257 YFLADKIATDDTSSN---ASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKPMIV 313 Query: 174 KGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRP 353 +GVGSP++VRF LPGEA+++EEA+ +LDGLGPRF DWWG EPLP+D DLLPAI+PGYRRP Sbjct: 314 QGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRP 373 Query: 354 FRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAV 533 FRLLPYG+KP LT+DEMT LRRLGRPLPCHF LGRN+ LQGLAASIVK WEKCEIAK+AV Sbjct: 374 FRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAV 433 Query: 534 KRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRD 713 KRGVQNTNS +MAEELK LTGGTLLSRDK+FI LYRGKDFLP AVS+AIE+RR+ IH + Sbjct: 434 KRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVE 493 Query: 714 KHTTHGHSSTEISPSLASKAENSTSAGEFHEKSVRKER--------KPKSTNAVMENTSS 869 K S + + + E++ S E S + +R KS A + T Sbjct: 494 KQGAECSKSKKTAQEVI--VEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDV 551 Query: 870 KLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRG 1049 KL ++ E+D+EG+T+EERYML+KVGLRMKPFLLLGRRG Sbjct: 552 KLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRG 611 Query: 1050 VFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIV 1229 VFDGT+ENMHLHWKYRELVKI++ E V+ +A+ LEAESGGILVAVERV +GYAIIV Sbjct: 612 VFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIV 671 Query: 1230 YRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXX 1409 YRGKNY+RP LRPQTLL K+QAMKRSLE QR +SLKLH+L L +N++D Sbjct: 672 YRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVND----------- 720 Query: 1410 NCKINHEPLTEQQRERTQ-FEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGS 1586 + H+ + +++ Q E + + V+EE E L+ + + GS Sbjct: 721 ---LEHQLVVDKEANSMQTVEQSSLPLVQEELETLQ-----------------SVEYTGS 760 Query: 1587 VVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLE-EDTHLEKLMNYTPEYEE 1763 V++ + G VE D S TS+ +D+ + + ++ M + ++ Sbjct: 761 VIECP-ASSGGHVESRDKDG------SESTSMKNDKMVATISIRQPSKQEFMEPSSIHDG 813 Query: 1764 FDN--TDLESKPEEVVREIHSVNFQEKLERIH--EDSFRGNVRLQGDAACAVTDKAEGYA 1931 F+N T+ E E V R+ H+ + ++ + S+ N+ + D + A+ + + Sbjct: 814 FENHKTESEFSAESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAE---HG 870 Query: 1932 XXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPV 2111 + L+ S+ E +K + A LSN++RL+LRKQAL MK+RPV Sbjct: 871 VSNNGPMESLVESASMLDVSISSAVENVSNK-MASTANFLSNKDRLLLRKQALKMKKRPV 929 Query: 2112 LAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPN 2291 LA+GRSN+VTGVAKAI+ HFQK+ LAIVNVKGRAKGTS+QE+V KL++ATGAV+VSQEP+ Sbjct: 930 LAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPS 989 Query: 2292 KVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 KVILYRGW G E RG ++ + +A+N+ VSPEL+AAIRLECGL +E Sbjct: 990 KVILYRGWGAGDELGRGD-------NRNAKDSLAQNRPAVSPELIAAIRLECGLQLQQE 1041 >ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao] gi|508710384|gb|EOY02281.1| CRM family member 2, putative isoform 1 [Theobroma cacao] Length = 1087 Score = 695 bits (1793), Expect = 0.0 Identities = 407/839 (48%), Positives = 535/839 (63%), Gaps = 17/839 (2%) Frame = +3 Query: 3 YFLTTN-TIDDTSGDELVSLPNGN-DGVTVDKATNLVCT-DSVKSGLPIVSNREAGKALV 173 YFL DDTS + + P+ N D V + + + +S K+ +P +N+ +V Sbjct: 299 YFLADKIATDDTSSN---ASPDTNMDNVELHETESCSSEINSAKTAIPNATNKMTKPMIV 355 Query: 174 KGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRP 353 +GVGSP++VRF LPGEA+++EEA+ +LDGLGPRF DWWG EPLP+D DLLPAI+PGYRRP Sbjct: 356 QGVGSPSRVRFQLPGEAELVEEANHLLDGLGPRFTDWWGYEPLPVDGDLLPAIIPGYRRP 415 Query: 354 FRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAV 533 FRLLPYG+KP LT+DEMT LRRLGRPLPCHF LGRN+ LQGLAASIVK WEKCEIAK+AV Sbjct: 416 FRLLPYGVKPILTNDEMTTLRRLGRPLPCHFVLGRNRKLQGLAASIVKHWEKCEIAKVAV 475 Query: 534 KRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRD 713 KRGVQNTNS +MAEELK LTGGTLLSRDK+FI LYRGKDFLP AVS+AIE+RR+ IH + Sbjct: 476 KRGVQNTNSELMAEELKWLTGGTLLSRDKDFIVLYRGKDFLPSAVSSAIEERRRHVIHVE 535 Query: 714 KHTTHGHSSTEISPSLASKAENSTSAGEFHEKSVRKER--------KPKSTNAVMENTSS 869 K S + + + E++ S E S + +R KS A + T Sbjct: 536 KQGAECSKSKKTAQEVI--VEDTKSGSESKINSAKDQRSNFFGDPKNMKSAEAAIRKTDV 593 Query: 870 KLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRG 1049 KL ++ E+D+EG+T+EERYML+KVGLRMKPFLLLGRRG Sbjct: 594 KLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPFLLLGRRG 653 Query: 1050 VFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIV 1229 VFDGT+ENMHLHWKYRELVKI++ E V+ +A+ LEAESGGILVAVERV +GYAIIV Sbjct: 654 VFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVSKGYAIIV 713 Query: 1230 YRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXX 1409 YRGKNY+RP LRPQTLL K+QAMKRSLE QR +SLKLH+L L +N++D Sbjct: 714 YRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVND----------- 762 Query: 1410 NCKINHEPLTEQQRERTQ-FEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGS 1586 + H+ + +++ Q E + + V+EE E L+ + + GS Sbjct: 763 ---LEHQLVVDKEANSMQTVEQSSLPLVQEELETLQ-----------------SVEYTGS 802 Query: 1587 VVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLE-EDTHLEKLMNYTPEYEE 1763 V++ + G VE D S TS+ +D+ + + ++ M + ++ Sbjct: 803 VIECP-ASSGGHVESRDKDG------SESTSMKNDKMVATISIRQPSKQEFMEPSSIHDG 855 Query: 1764 FDN--TDLESKPEEVVREIHSVNFQEKLERIH--EDSFRGNVRLQGDAACAVTDKAEGYA 1931 F+N T+ E E V R+ H+ + ++ + S+ N+ + D + A+ + + Sbjct: 856 FENHKTESEFSAESVNRKSHATELRALHTQVEMVDTSYPDNLMEEIDDSGAINAE---HG 912 Query: 1932 XXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPV 2111 + L+ S+ E +K + A LSN++RL+LRKQAL MK+RPV Sbjct: 913 VSNNGPMESLVESASMLDVSISSAVENVSNK-MASTANFLSNKDRLLLRKQALKMKKRPV 971 Query: 2112 LAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPN 2291 LA+GRSN+VTGVAKAI+ HFQK+ LAIVNVKGRAKGTS+QE+V KL++ATGAV+VSQEP+ Sbjct: 972 LAVGRSNIVTGVAKAIRAHFQKHPLAIVNVKGRAKGTSVQEVVLKLQEATGAVLVSQEPS 1031 Query: 2292 KVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 KVILYRGW G E RG ++ + +A+N+ VSPEL+AAIRLECGL +E Sbjct: 1032 KVILYRGWGAGDELGRGD-------NRNAKDSLAQNRPAVSPELIAAIRLECGLQLQQE 1083 >ref|XP_006338518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X1 [Solanum tuberosum] Length = 1049 Score = 690 bits (1780), Expect = 0.0 Identities = 397/813 (48%), Positives = 514/813 (63%), Gaps = 17/813 (2%) Frame = +3 Query: 81 TVDKATNLVCTDSVKSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDG 260 T + TN TD VK P S+R++ +++GVGSP++VRF LPGEA+ EEAD++L+G Sbjct: 286 TEEHMTNSSGTDVVK---PDASDRKSPPRVIQGVGSPDRVRFELPGEAEHTEEADKLLEG 342 Query: 261 LGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPC 440 LGPRF DWWG EPLPIDADLLPAIVPGY+RPFRLLPYG+KPKLT+DEMT LRRLGRPLPC Sbjct: 343 LGPRFTDWWGCEPLPIDADLLPAIVPGYKRPFRLLPYGVKPKLTNDEMTTLRRLGRPLPC 402 Query: 441 HFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDK 620 HF LGRN+ LQGLAA+IVKLWEKCEIAK+AVKRGVQNTNS +MAEELK LTGGTLLSRD+ Sbjct: 403 HFVLGRNRKLQGLAAAIVKLWEKCEIAKVAVKRGVQNTNSELMAEELKWLTGGTLLSRDR 462 Query: 621 EFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHTTHGHS---STEISPSLASKAENSTSA 791 EFI YRGKDFLP AVS+AIE+RRK +K S + E S + A Sbjct: 463 EFIVFYRGKDFLPSAVSSAIEERRKQVFEEEKRNGFNSSVANAKERKQSTTGSVSDDGHA 522 Query: 792 GEFHEKSVRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREG 971 ++K V++++K S A ++ T+ KL T ++ ++D+EG Sbjct: 523 RRNNQKGVQEKKKLTSMEAAIKRTADKLTTALEKKAEAENLLLELEEDEVPQQSDMDKEG 582 Query: 972 VTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGV 1151 +TEEER+ML+K+GLRMKPFLLLGRRGVFDGT+ENMHLHWKYRELVK++ + E+V+ + Sbjct: 583 ITEEERFMLRKIGLRMKPFLLLGRRGVFDGTVENMHLHWKYRELVKVITGRKTIEEVHQI 642 Query: 1152 AKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCE 1331 A+ LEAESGGILVAVE V++G+AIIVYRGKNY+RPA LRPQTLL+K++AMKRS+EAQR + Sbjct: 643 ARMLEAESGGILVAVELVNKGHAIIVYRGKNYERPASLRPQTLLSKREAMKRSIEAQRRQ 702 Query: 1332 SLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHEPLTEQQRERTQFEVAQVSQVKEESEDL 1511 SLKLHVLKL QNI+ A S++ + E + Sbjct: 703 SLKLHVLKLTQNIE---------------------------------ALQSRLAKNEEMV 729 Query: 1512 EINHVSSTEKQRETTQFKTSDSLGSVVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSD 1691 I ++Q T SD+ G Q ++ S A + S L SD Sbjct: 730 HIQSPDIVDRQVPVTGI--SDAAGGT---NYQSSSASPTEDSGDAAEDTDPSSQKELSSD 784 Query: 1692 QSMDD--LEEDTHLEKLMNYTPEYEEFDNTDLESKPEEVVREIHSVNFQEKLERIHEDSF 1865 S D +++ ++ Y + E +T +PE + I S+ + + ++ D Sbjct: 785 SSDTDHNSQQEFPIDPFFQYEGKVEAVGDT---IQPEH--QSISSIKESKSMFNVNVDQ- 838 Query: 1866 RGNVRLQGDAACAVTDKAEGYAXXXXXXXXXXXXRKNQLE-----SSVQGDKEQRGSKGV 2030 + G A K+ + +++ S + K Q+ + Sbjct: 839 ----KTFGSAVSESVSKSSRGEVKIHFSETRSFNKPREVDDKKEVSQLPSVKPQQALRST 894 Query: 2031 RFRAQ-------PLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALA 2189 R R++ LSNRERL+LRKQAL MK++PVLA+GRSN+VTGVAK IK HF+K LA Sbjct: 895 RSRSEGMPTRKVQLSNRERLLLRKQALKMKKQPVLAVGRSNIVTGVAKNIKEHFKKYPLA 954 Query: 2190 IVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYS 2369 IVNVKGRAKGTS++E+VFKLE+ATGAV+VSQEP+KVILYRGW GGE G + G Sbjct: 955 IVNVKGRAKGTSVREVVFKLEQATGAVLVSQEPSKVILYRGWGPGGE---RGASNGNDTR 1011 Query: 2370 KKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 + R + +SPEL++AIRLECGL S+ + Sbjct: 1012 NSRNSREQKELMSISPELISAIRLECGLQSNHD 1044 >ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Cucumis sativus] Length = 1032 Score = 679 bits (1751), Expect = 0.0 Identities = 386/819 (47%), Positives = 514/819 (62%), Gaps = 3/819 (0%) Frame = +3 Query: 6 FLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGVG 185 + + ++D + + + +DG + + L C + +S P S + L++GVG Sbjct: 255 YFSHEILEDEGSQDALPASHSDDGGNSETESTLSCINDERSAGPTSSVKMPSPTLIQGVG 314 Query: 186 SPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRLL 365 +PN+VRF LPGEA++ E+A+ +L+GLGPRF DWWG +PLP+DADLLPAIVPGYR+PFRLL Sbjct: 315 APNRVRFQLPGEAELAEDAESLLEGLGPRFSDWWGYDPLPVDADLLPAIVPGYRKPFRLL 374 Query: 366 PYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRGV 545 PYG+KPKLT+DEMT LRRL RPLPCHFALGRN+ LQGLAASI++LWEKCEIAKIAVKRGV Sbjct: 375 PYGVKPKLTNDEMTSLRRLARPLPCHFALGRNRKLQGLAASIIQLWEKCEIAKIAVKRGV 434 Query: 546 QNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHTT 725 QNTN+ +MAEEL+ LTGGTLLSRD+EFI LYRGKDFLP AVS+A+E +R R+H K T Sbjct: 435 QNTNNKLMAEELQLLTGGTLLSRDREFIVLYRGKDFLPFAVSSAMEQKRHMRLHEMKQTD 494 Query: 726 HGHSSTEISPSLASKAENSTSAGEF---HEKSVRKERKPKSTNAVMENTSSKLFTVXXXX 896 + ++T L T+ + +K V + RK S+ M TS KL Sbjct: 495 NSPATTGQGLKLEINENGPTNESQSITGWKKIVSERRKLMSSETSMRKTSIKLSIALEKK 554 Query: 897 XXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENM 1076 ++PE+D+EG+T EERYMLKKVGLRMKPFLLLGRRGVFDGT+ENM Sbjct: 555 AKAEEFLAKLEEEEKLQQPEIDKEGITVEERYMLKKVGLRMKPFLLLGRRGVFDGTVENM 614 Query: 1077 HLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRP 1256 HLHWKYRELVKI+ + R + V+ VA+TLEAESGGILVAVERV R +AII++RGKNY+RP Sbjct: 615 HLHWKYRELVKIITNERSFKTVHDVARTLEAESGGILVAVERVKRSFAIIIFRGKNYKRP 674 Query: 1257 ADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHEPL 1436 + LRP++LLNKK+A+KRS+EAQR +SLKLHVLKL QN+++ + + Sbjct: 675 SRLRPESLLNKKEALKRSIEAQRRKSLKLHVLKLTQNVEELKLKLDEDKRAIGMESIKTS 734 Query: 1437 TEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVKPQIQKNA 1616 T QQ + E+ +K ++ + H ++ E K G+ I + Sbjct: 735 TFQQGKEGIDEIQTTGSLKLVADSACLTHAENSTCLEENEVAKVKKGHGTHSSGTICLDT 794 Query: 1617 GSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLESKPE 1796 + H ++ S + + + H + M+ E+ + P+ Sbjct: 795 SVNRLQTTNDVFLIHNGDQSNATVRPSFESVRQGNHAKVPMDTNAEFGTIE-------PQ 847 Query: 1797 EVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXXXXXXXXXRKN 1976 + + + +H +V + D +V + E + Sbjct: 848 SGANSLSGESNSGTSDAVH------HVAMNKDTKPSVRLEEE---------------KSP 886 Query: 1977 QLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVAKA 2156 L SS + ++ V LSN+ERL+LR+QAL MK+ PVL++G+SNV+TGVAKA Sbjct: 887 PLLSSTRINQPGYFPANV----PQLSNKERLLLRRQALKMKKLPVLSVGKSNVITGVAKA 942 Query: 2157 IKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGEDP 2336 IK HF+K++LAIVNVKGRAKGTS+QE+VFKLE+ATGAV+VSQEP+KVILYRGWEE ED Sbjct: 943 IKEHFKKHSLAIVNVKGRAKGTSVQEIVFKLEQATGAVLVSQEPSKVILYRGWEE--ED- 999 Query: 2337 RGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGL 2453 K KA K+SG ++ +S ELMAAIR+ECGL Sbjct: 1000 ----RKQKATMMKNSG---EDRLSMSSELMAAIRIECGL 1031 Score = 62.8 bits (151), Expect = 8e-07 Identities = 36/104 (34%), Positives = 57/104 (54%) Frame = +3 Query: 945 REPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASA 1124 R P + +TEEE L+ +G+R+K L +G+ G+ +G + +H +W+ E+VKI Sbjct: 155 RAPSLAELSLTEEELGRLRTIGIRLKKKLNVGKAGITEGIVNTIHEYWRRSEVVKIACED 214 Query: 1125 RGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRP 1256 R ++ LE ++GGI+V G II+YRG NY P Sbjct: 215 LCRLNMKRTHDLLERKTGGIVV----WRSGSKIILYRGPNYIYP 254 >gb|EYU44699.1| hypothetical protein MIMGU_mgv1a000630mg [Mimulus guttatus] Length = 1040 Score = 671 bits (1731), Expect = 0.0 Identities = 392/821 (47%), Positives = 510/821 (62%), Gaps = 4/821 (0%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGV 182 YF+ N+ +D+S +E + N ++ + S ++ + + + +LV+GV Sbjct: 263 YFMADNSSNDSSSEESPDMDNDQHSNALESSEESPDLGSPRTNALESNTQISHPSLVQGV 322 Query: 183 GSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRL 362 G P++VRF LPGEA+I+ EAD +L+GLGPRF DWWG +PLP+DADLLPA+VPGY+RPFRL Sbjct: 323 GLPDRVRFQLPGEAEIVAEADSLLEGLGPRFTDWWGNDPLPVDADLLPAVVPGYKRPFRL 382 Query: 363 LPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRG 542 LPYG+ KLT+DEMT LRRLGRPLP HFALGRN+ QGLAA IVKLWEKCEIAKIAVKRG Sbjct: 383 LPYGVNHKLTNDEMTTLRRLGRPLPIHFALGRNRKHQGLAACIVKLWEKCEIAKIAVKRG 442 Query: 543 VQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHT 722 VQNTNS++MAEELK LTGGTLLSRD+EFI LYRGKDFLP AVS+AI++RRK I K Sbjct: 443 VQNTNSVLMAEELKWLTGGTLLSRDREFIVLYRGKDFLPAAVSSAIQERRKYEIDASKTR 502 Query: 723 THGHSSTEISPSLASKAENSTSAGEFHEK----SVRKERKPKSTNAVMENTSSKLFTVXX 890 S+ E +T A + +E VR++R+ + + + ME TS+KL Sbjct: 503 AGNLSNLNEKEHRHGTKEYATEAEQHNEADQNLQVREKRRVRFSESAMERTSTKLSMALE 562 Query: 891 XXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIE 1070 + PE D+EG+TEEERYML+KVGLRMK FLLLGRRGVFDGT+E Sbjct: 563 KKARAEKLLEELAKEESPQPPETDKEGITEEERYMLRKVGLRMKAFLLLGRRGVFDGTVE 622 Query: 1071 NMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQ 1250 NMHLHWKYRELVK+ R E+V+GVA+TLEAESGGILVAVERV +G+ IIVYRGKNY Sbjct: 623 NMHLHWKYRELVKVCIGNRSIEEVHGVARTLEAESGGILVAVERVSKGFDIIVYRGKNYT 682 Query: 1251 RPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHE 1430 RPA LRPQTLL+K++AMKRSLEAQR ESLKLHVLKL++NID+ N Sbjct: 683 RPASLRPQTLLSKREAMKRSLEAQRRESLKLHVLKLSKNIDELKLKMAKDE----NTNRP 738 Query: 1431 PLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVKPQIQK 1610 LTE ++ V+E E +T K E + D++ Sbjct: 739 HLTED---------LELGFVRESHE------TDATNKDPEEPMHISEDTV---------- 773 Query: 1611 NAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLESK 1790 H++ LP D S+ E +NY F+ T+ E + Sbjct: 774 ----------------HIAQ-KDLPGDVSLQS-------EVKVNYL-----FETTEAEVQ 804 Query: 1791 PEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXXXXXXXXXR 1970 P + E +S F +K +I F + R Q + + R Sbjct: 805 PTSLSNEGNS--FSDKNNQIGNMEFVRSPRSQDRRNSSPSTYIR--PQTGRRKSDGGGYR 860 Query: 1971 KNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGRSNVVTGVA 2150 +E S Q ++R S + R+ LSN+ERL+LRKQAL MK+ P+LA+G+ NVVTGV Sbjct: 861 NVDIEPSGQKPMKERPSL-MPSRSVQLSNKERLLLRKQALRMKKIPILAVGKRNVVTGVT 919 Query: 2151 KAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILYRGWEEGGE 2330 K IK HF+K+ LAIVN+KGRAKGTS QE+++ LE++TGAV+VSQEP+KVILYRGW Sbjct: 920 KTIKEHFEKHPLAIVNIKGRAKGTSAQEVIYNLEQSTGAVLVSQEPSKVILYRGW-GFDT 978 Query: 2331 DPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGL 2453 D + + + + S+ + + + ++SPEL++A+RLECGL Sbjct: 979 DSESNMRQNQDFKYDSTNKEVKTRPLISPELISAMRLECGL 1019 >ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X1 [Citrus sinensis] gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X2 [Citrus sinensis] Length = 1076 Score = 669 bits (1727), Expect = 0.0 Identities = 398/838 (47%), Positives = 525/838 (62%), Gaps = 16/838 (1%) Frame = +3 Query: 3 YFLTT-NTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKG 179 YFL ++ D S D+L + ++G+ K T+ DS K +N++ + L+ Sbjct: 271 YFLADESSTDGASSDDLPNQLVDDEGLDETK-THSSGADSAKPSGQSPTNKKVQQTLIHS 329 Query: 180 VGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFR 359 VGSP+K+R+ LPGEA+++EEADR+LDGLGPRF DWWG +P P+DADLL A VPGYRRPFR Sbjct: 330 VGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFR 389 Query: 360 LLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKR 539 LLPYG++PKLT+DEMT LRRLGRPLPCHFALGRN+NLQGLAA+IVKLWEKCEIAKIAVKR Sbjct: 390 LLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKR 449 Query: 540 GVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKH 719 G QNTNS MMA+ELKRLTGGTLLSRD+EFI YRGKDFLPPA S AIE+RR KH Sbjct: 450 GAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERR-------KH 502 Query: 720 TTHGHSSTEISPSLASKAENS--TSAGEF-----HEKSVRKERKPKSTNAVMENTSSKLF 878 + ++ P L ++ +NS + EF + ++ E+K + + V ++ Sbjct: 503 EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL 562 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 + + EVD+EG+TEEERYML+KVGLRMK FLL+GRRGVFD Sbjct: 563 SRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 622 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GT+ENMHLHWK+RELVKI++ R E A+TLE ESGGILVAVERV++GYAII+YRG Sbjct: 623 GTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRG 682 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCK 1418 KNY+RPA LRP+TLL K++AMKRSLEAQR +SLKLHVL+L +NI+ N Sbjct: 683 KNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEAN-- 740 Query: 1419 INHEPLTEQQRERTQFEVA--QVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVV 1592 + E + E + E+ Q ++ E+N + E + T +++D+ + + Sbjct: 741 -SLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATI 799 Query: 1593 --KPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEF 1766 P IQ++ + T + + + + S S+ + +++ L + ++ + E Sbjct: 800 DGPPAIQQDKQTESLTHNGIS-------INEIESKSSLKSVSKESQLNMIADF---FAEG 849 Query: 1767 DNTDLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXX 1946 + S P+ ++E+ N E+ D N + A + +E Sbjct: 850 VASGTSSCPDNSMQEVMEYNTIVDAEQCSSD----NEPRESSIESAKSRSSEN------- 898 Query: 1947 XXXXXXXRKNQLESSVQGDKEQRGSKGV----RFRAQPLSNRERLILRKQALTMKRRPVL 2114 + +L G G+ V RA LSNR+RL+LRKQAL MK+RPVL Sbjct: 899 ---EPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVL 955 Query: 2115 AIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNK 2294 A+GRSN+VTGVAKAIK HF+K LAIVNVKGRAKGTS+QE+V KLE+ATGAV+VSQEP+K Sbjct: 956 AVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSK 1015 Query: 2295 VILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 VILYRGW G ED + + +K S R R VS EL+AAI+LECGL +E Sbjct: 1016 VILYRGW--GAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1071 >ref|XP_006849108.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda] gi|548852581|gb|ERN10689.1| hypothetical protein AMTR_s00028p00245370 [Amborella trichopoda] Length = 1042 Score = 667 bits (1722), Expect = 0.0 Identities = 393/788 (49%), Positives = 488/788 (61%), Gaps = 18/788 (2%) Frame = +3 Query: 159 GKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVP 338 G+++V GVGSPNKVRF LPGE Q+ +EADR+LDGLGPRF DWWG PLP+DADLLPA V Sbjct: 307 GRSIVLGVGSPNKVRFQLPGERQLDKEADRLLDGLGPRFTDWWGYGPLPVDADLLPATVS 366 Query: 339 GYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEI 518 GYR+PFRLLPYG+KPKLTD EMT LRRLGRPLPCHFALGRN+NLQGLA SIV+LWEKCEI Sbjct: 367 GYRKPFRLLPYGVKPKLTDSEMTTLRRLGRPLPCHFALGRNRNLQGLATSIVRLWEKCEI 426 Query: 519 AKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKP 698 AKIAVKRGVQNTNS +MAEELKRLTGGTLLSRD+EFI YRGKDFLPPAVS+AIE+RR Sbjct: 427 AKIAVKRGVQNTNSELMAEELKRLTGGTLLSRDREFIVFYRGKDFLPPAVSSAIEERRTV 486 Query: 699 RIHRDKHTTHGHSSTEISPSL---------ASKAENSTSAGEFHEKSVRKERKPKSTNAV 851 + R + + + SL S AE + EK + + KP N Sbjct: 487 DVLRKQLKGNRNLDLSSQASLGYDVRLVKTTSDAELQDLNNQDEEKLSKDQLKPMKVNVA 546 Query: 852 MENTSSKLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFL 1031 M+ KL +P++D+EG+TEEERYML+KVGLRMK FL Sbjct: 547 MKRLDWKLSEALEKKQMAERKLAELESKAELSKPDIDKEGITEEERYMLRKVGLRMKAFL 606 Query: 1032 LLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDR 1211 LLGRRGVFDGTIENMHLHWKYREL+KI++ R +V+ A+TLEAESGGILV+VE V++ Sbjct: 607 LLGRRGVFDGTIENMHLHWKYRELIKIISKDRSIAEVHHAARTLEAESGGILVSVETVNK 666 Query: 1212 GYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXX 1391 G+AIIVYRGKNYQRP +LRPQ LLNK++AMK SLEAQR E+ V+ + Sbjct: 667 GHAIIVYRGKNYQRPDNLRPQNLLNKREAMKHSLEAQRREAKDDRVVASPHSTRYLGSSN 726 Query: 1392 XXXXXXNCKINHEPLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTS 1571 + + ++ + +Q S+D ++ V+ + R +T + Sbjct: 727 CELGNTEHTLGSLDYSNHFKDMENGDASQGPLHSSSSDDEDV--VTPSNGVRWSTSY-AD 783 Query: 1572 DSLGSVVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTP 1751 D+ VVK + + +F SPK + + + ++ S S D+ EE LE P Sbjct: 784 DAQQVVVKRRFPR-----DFEKSPKDVSSSKTVVSRSCSCVSQDEAEERLELE------P 832 Query: 1752 EYEEFDNTDLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYA 1931 ++ D + L A A T+ Sbjct: 833 DFHTED-----------------------------------IMLHNKPALATTEGEPLLP 857 Query: 1932 XXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVR--FRAQPLSNRERLILRKQALTMKRR 2105 SS DK + S GV F+AQ LSN+ERLILRKQALTMK+R Sbjct: 858 PMIEPTGLSSKAPLGNTSSSKPLDK-RVSSIGVETSFKAQSLSNKERLILRKQALTMKKR 916 Query: 2106 PVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQE 2285 PVLAIGR+N+VTGVA+AIKTHF+KN LAIVNVKGRAKGTS+QE+VFKLE+ATGAV+VSQE Sbjct: 917 PVLAIGRNNIVTGVAEAIKTHFKKNPLAIVNVKGRAKGTSVQEVVFKLEQATGAVLVSQE 976 Query: 2286 PNKVILYRGWEEGGED-------PRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLE 2444 PNKVILYRGW G ++ + + GKA + +G V SP+L+AA+RLE Sbjct: 977 PNKVILYRGWGLGDQNSGTVSKTSKRSINGGKALGRSGNGFVGVKD--ASPQLLAAMRLE 1034 Query: 2445 CGLASSKE 2468 CGL S++E Sbjct: 1035 CGLISNEE 1042 >ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X4 [Citrus sinensis] Length = 1050 Score = 667 bits (1720), Expect = 0.0 Identities = 400/834 (47%), Positives = 515/834 (61%), Gaps = 12/834 (1%) Frame = +3 Query: 3 YFLTT-NTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKG 179 YFL ++ D S D+L + ++G+ K T+ DS K +N++ + L+ Sbjct: 271 YFLADESSTDGASSDDLPNQLVDDEGLDETK-THSSGADSAKPSGQSPTNKKVQQTLIHS 329 Query: 180 VGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFR 359 VGSP+K+R+ LPGEA+++EEADR+LDGLGPRF DWWG +P P+DADLL A VPGYRRPFR Sbjct: 330 VGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFR 389 Query: 360 LLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKR 539 LLPYG++PKLT+DEMT LRRLGRPLPCHFALGRN+NLQGLAA+IVKLWEKCEIAKIAVKR Sbjct: 390 LLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKR 449 Query: 540 GVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKH 719 G QNTNS MMA+ELKRLTGGTLLSRD+EFI YRGKDFLPPA S AIE+RR KH Sbjct: 450 GAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERR-------KH 502 Query: 720 TTHGHSSTEISPSLASKAENS--TSAGEF-----HEKSVRKERKPKSTNAVMENTSSKLF 878 + ++ P L ++ +NS + EF + ++ E+K + + V ++ Sbjct: 503 EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL 562 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 + + EVD+EG+TEEERYML+KVGLRMK FLL+GRRGVFD Sbjct: 563 SRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 622 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GT+ENMHLHWK+RELVKI++ R E A+TLE ESGGILVAVERV++GYAII+YRG Sbjct: 623 GTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRG 682 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCK 1418 KNY+RPA LRP+TLL K++AMKRSLEAQR +SLKLHVL+L +NI+ N Sbjct: 683 KNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEAN-- 740 Query: 1419 INHEPLTEQQRERTQFEVA--QVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVV 1592 + E + E + E+ Q ++ E+N + E + T +++D+ + + Sbjct: 741 -SLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATI 799 Query: 1593 --KPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEF 1766 P IQ++ + T + E S +S P + + +E +T ++ E Sbjct: 800 DGPPAIQQDKQTESLTHNDFFAEGVASGTSSCPDNSMQEVMEYNTIVD------AEQCSS 853 Query: 1767 DNTDLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXX 1946 DN ES I S + E SF + A+G + Sbjct: 854 DNEPRES-------SIESAKSRSSENEPIEQSF---------------ELAKGRSGLSTP 891 Query: 1947 XXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGR 2126 +N RA LSNR+RL+LRKQAL MK+RPVLA+GR Sbjct: 892 IGTGNVWNEN------------------NSRAIQLSNRDRLLLRKQALRMKKRPVLAVGR 933 Query: 2127 SNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILY 2306 SN+VTGVAKAIK HF+K LAIVNVKGRAKGTS+QE+V KLE+ATGAV+VSQEP+KVILY Sbjct: 934 SNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILY 993 Query: 2307 RGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 RGW G ED + + +K S R R VS EL+AAI+LECGL +E Sbjct: 994 RGW--GAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1045 >ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X3 [Citrus sinensis] Length = 1062 Score = 665 bits (1717), Expect = 0.0 Identities = 403/844 (47%), Positives = 521/844 (61%), Gaps = 22/844 (2%) Frame = +3 Query: 3 YFLTT-NTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKG 179 YFL ++ D S D+L + ++G+ K T+ DS K +N++ + L+ Sbjct: 271 YFLADESSTDGASSDDLPNQLVDDEGLDETK-THSSGADSAKPSGQSPTNKKVQQTLIHS 329 Query: 180 VGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFR 359 VGSP+K+R+ LPGEA+++EEADR+LDGLGPRF DWWG +P P+DADLL A VPGYRRPFR Sbjct: 330 VGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFR 389 Query: 360 LLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKR 539 LLPYG++PKLT+DEMT LRRLGRPLPCHFALGRN+NLQGLAA+IVKLWEKCEIAKIAVKR Sbjct: 390 LLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKR 449 Query: 540 GVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKH 719 G QNTNS MMA+ELKRLTGGTLLSRD+EFI YRGKDFLPPA S AIE+RR KH Sbjct: 450 GAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERR-------KH 502 Query: 720 TTHGHSSTEISPSLASKAENS--TSAGEF-----HEKSVRKERKPKSTNAVMENTSSKLF 878 + ++ P L ++ +NS + EF + ++ E+K + + V ++ Sbjct: 503 EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL 562 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 + + EVD+EG+TEEERYML+KVGLRMK FLL+GRRGVFD Sbjct: 563 SRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 622 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GT+ENMHLHWK+RELVKI++ R E A+TLE ESGGILVAVERV++GYAII+YRG Sbjct: 623 GTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRG 682 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCK 1418 KNY+RPA LRP+TLL K++AMKRSLEAQR +SLKLHVL+L +NI+ K Sbjct: 683 KNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIE--------------K 728 Query: 1419 INHEPLTEQQRERTQ-FEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVK 1595 + + + +++ + + + + VKEE D++ E + TS + + Sbjct: 729 LKLQLVKDKEANSLETIDESILPLVKEEIGDMQ---------PAECMRSDTSHEVNVQAR 779 Query: 1596 PQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNT 1775 + + S E D+ A + P+ Q E TH +N Sbjct: 780 GECGADLTSTESNDTGDAT------IDGPPAIQQDKQTESLTHNGISIN----------- 822 Query: 1776 DLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXXXXX 1955 ++ESK + SV+ + +L I D F V G ++C Sbjct: 823 EIESK-----SSLKSVSKESQLNMI-ADFFAEGV-ASGTSSCPDNSMCSSDNEPRESSIE 875 Query: 1956 XXXXRKNQLESSVQGDKEQRGSKGV-------------RFRAQPLSNRERLILRKQALTM 2096 R ++ E Q + +G G+ RA LSNR+RL+LRKQAL M Sbjct: 876 SAKSRSSENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRM 935 Query: 2097 KRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMV 2276 K+RPVLA+GRSN+VTGVAKAIK HF+K LAIVNVKGRAKGTS+QE+V KLE+ATGAV+V Sbjct: 936 KKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLV 995 Query: 2277 SQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLA 2456 SQEP+KVILYRGW G ED + + +K S R R VS EL+AAI+LECGL Sbjct: 996 SQEPSKVILYRGW--GAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQ 1053 Query: 2457 SSKE 2468 +E Sbjct: 1054 GQQE 1057 >ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X5 [Citrus sinensis] Length = 1045 Score = 662 bits (1709), Expect = 0.0 Identities = 400/834 (47%), Positives = 515/834 (61%), Gaps = 12/834 (1%) Frame = +3 Query: 3 YFLTT-NTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKG 179 YFL ++ D S D+L + ++G+ K T+ DS K +N++ + L+ Sbjct: 271 YFLADESSTDGASSDDLPNQLVDDEGLDETK-THSSGADSAKPSGQSPTNKKVQQTLIHS 329 Query: 180 VGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFR 359 VGSP+K+R+ LPGEA+++EEADR+LDGLGPRF DWWG +P P+DADLL A VPGYRRPFR Sbjct: 330 VGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLSATVPGYRRPFR 389 Query: 360 LLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKR 539 LLPYG++PKLT+DEMT LRRLGRPLPCHFALGRN+NLQGLAA+IVKLWEKCEIAKIAVKR Sbjct: 390 LLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKR 449 Query: 540 GVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKH 719 G QNTNS MMA+ELKRLTGGTLLSRD+EFI YRGKDFLPPA S AIE+RR KH Sbjct: 450 GAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASCAIEERR-------KH 502 Query: 720 TTHGHSSTEISPSLASKAENS--TSAGEF-----HEKSVRKERKPKSTNAVMENTSSKLF 878 + ++ P L ++ +NS + EF + ++ E+K + + V ++ Sbjct: 503 EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQKSTMHSEQKERRSAEVAIRRTNIRL 562 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 + + EVD+EG+TEEERYML+KVGLRMK FLL+GRRGVFD Sbjct: 563 SRALEKKAEAEKLLAELEEETPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 622 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GT+ENMHLHWK+RELVKI++ R E A+TLE ESGGILVAVERV++GYAII+YRG Sbjct: 623 GTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRG 682 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCK 1418 KNY+RPA LRP+TLL K++AMKRSLEAQR +SLKLHVL+L +NI+ N Sbjct: 683 KNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQLVKDKEAN-- 740 Query: 1419 INHEPLTEQQRERTQFEVA--QVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVV 1592 + E + E + E+ Q ++ E+N + E + T +++D+ + + Sbjct: 741 -SLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTSTESNDTGDATI 799 Query: 1593 --KPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEF 1766 P IQ++ + T + A S +S P + + +E +T ++ E Sbjct: 800 DGPPAIQQDKQTESLTHNGVA-----SGTSSCPDNSMQEVMEYNTIVD------AEQCSS 848 Query: 1767 DNTDLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDKAEGYAXXXXX 1946 DN ES I S + E SF + A+G + Sbjct: 849 DNEPRES-------SIESAKSRSSENEPIEQSF---------------ELAKGRSGLSTP 886 Query: 1947 XXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAIGR 2126 +N RA LSNR+RL+LRKQAL MK+RPVLA+GR Sbjct: 887 IGTGNVWNEN------------------NSRAIQLSNRDRLLLRKQALRMKKRPVLAVGR 928 Query: 2127 SNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVILY 2306 SN+VTGVAKAIK HF+K LAIVNVKGRAKGTS+QE+V KLE+ATGAV+VSQEP+KVILY Sbjct: 929 SNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEVVAKLEEATGAVLVSQEPSKVILY 988 Query: 2307 RGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGLASSKE 2468 RGW G ED + + +K S R R VS EL+AAI+LECGL +E Sbjct: 989 RGW--GAEDESSPRGRQNSRAKPSIVRDVRPWPAVSRELLAAIKLECGLQGQQE 1040 >ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Glycine max] Length = 1027 Score = 653 bits (1685), Expect = 0.0 Identities = 393/836 (47%), Positives = 515/836 (61%), Gaps = 19/836 (2%) Frame = +3 Query: 3 YFLTTNTI-DDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGK-ALVK 176 YFL+ DD +GD + + D DK + + + SN + K AL++ Sbjct: 221 YFLSDKVSRDDNTGDAMQHMDE--DAKNFDKRESHSSEKNSVTYAGKSSNVKTAKPALIQ 278 Query: 177 GVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPF 356 GVGSPNKVRF LPGEA++ ++AD +L G+GPRFIDWWG +PLP+DADLLPA++PGYR+PF Sbjct: 279 GVGSPNKVRFQLPGEAELAKDADSLLTGIGPRFIDWWGYDPLPVDADLLPAVIPGYRKPF 338 Query: 357 RLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVK 536 RLLPYG+KPKLTDDEMT +RRLG+ LPCHFALGRNK L GLAA+I+KLWE+CEI KIA+K Sbjct: 339 RLLPYGVKPKLTDDEMTTMRRLGKHLPCHFALGRNKKLHGLAAAIIKLWERCEIVKIAIK 398 Query: 537 RGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDK 716 RGV NTN +MAEE+K LTGGTL++RDKEFI YRGKDFLP AVS+AIE RR +++ K Sbjct: 399 RGVLNTNGELMAEEIKYLTGGTLIARDKEFIVFYRGKDFLPTAVSSAIEQRRSIGMYKLK 458 Query: 717 HTTHGHSSTEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTVXXXX 896 T + S T+ E + + K K+ A +++TS KL Sbjct: 459 -TRNSLSVTDDPDLKDGTIECDSEVKGMNFKKDTKQGMLTEAEAAIKSTSIKLSMALEEK 517 Query: 897 XXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENM 1076 +E E+++EG+TEEE+YML+++GL+M PFLLLGRRGVFDGT+ENM Sbjct: 518 AKAEKLLSELENAESPQEEEINKEGITEEEKYMLRRIGLKMSPFLLLGRRGVFDGTVENM 577 Query: 1077 HLHWKYRELVKIMASAR-GREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQR 1253 HLHWKYRELVKI+ + + EDV +A+TLEAESGGIL+AVERV++ YAIIVYRGKNY R Sbjct: 578 HLHWKYRELVKIICNKQMSLEDVQQIAQTLEAESGGILIAVERVNKSYAIIVYRGKNYSR 637 Query: 1254 PADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHEP 1433 PA LRP+TLLNKKQA+KRS+EAQRCESLKLHVLKL +NI++ + H+ Sbjct: 638 PASLRPRTLLNKKQALKRSIEAQRCESLKLHVLKLDRNINE--------------LKHQM 683 Query: 1434 LTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDSLGSVVKPQIQKN 1613 + + Q V ++E + +E+ + + + V Q Sbjct: 684 AKDMEANSKQTSVDNQQAIQE--QPVELIDSGGAHQAEPGNSINWNYPKEASVDYQQTMQ 741 Query: 1614 AGSVEFTDSPKAM--EAHVSYLTSLPSDQSMDDLE--EDTHLEKLMNYTPEYEEFDNTDL 1781 SVE D A+ E S + P + S+D+ + + E + + E +N+ Sbjct: 742 EQSVELFDGGGAVQSEPQNSINWNSPKEASVDNQQAIQGQSFELIDRSEAHHGEPENSID 801 Query: 1782 ESKPEEVVREIHSVNFQEKLERI-----HED---SFRG----NVRLQGDAACAVTDKAEG 1925 + PEE + + +E I H+D S+ G +L D+ +V D Sbjct: 802 WNSPEEASVDNQQAIQGQPVELIDGGGAHQDEPESWSGLIPKETKLDRDSD-SVVDTQHC 860 Query: 1926 YAXXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRKQALTMKRR 2105 + + S++ D S + R+ LSNRERL+LRKQAL MK+R Sbjct: 861 VSISKVMESSIVASESDPDLSALVRD---MSSNELPSRSVYLSNRERLLLRKQALKMKKR 917 Query: 2106 PVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQE 2285 PVL++G+SN+VTG+AKAIK HFQK+ LAIVNVKGRAKGTSIQE+V KLE+ TGAV+VSQE Sbjct: 918 PVLSVGKSNIVTGLAKAIKAHFQKHPLAIVNVKGRAKGTSIQEVVSKLEQETGAVLVSQE 977 Query: 2286 PNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSPELMAAIRLECGL 2453 NKVILYRGW E GE P + K G+ K VSPEL+ AIR+ECGL Sbjct: 978 LNKVILYRGWGE-GEKPSTAINFDKV------GKEVAAKPGVSPELLEAIRVECGL 1026 >ref|NP_186786.2| CRM family member 2 [Arabidopsis thaliana] gi|22531018|gb|AAM97013.1| unknown protein [Arabidopsis thaliana] gi|37202002|gb|AAQ89616.1| At3g01370 [Arabidopsis thaliana] gi|332640136|gb|AEE73657.1| CRM family member 2 [Arabidopsis thaliana] Length = 1011 Score = 649 bits (1675), Expect = 0.0 Identities = 377/790 (47%), Positives = 483/790 (61%), Gaps = 13/790 (1%) Frame = +3 Query: 123 KSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPL 302 +S P ++N+ L +GVGSP+KVRF LPGE Q++EEADR+L+GLGPRF DWW +PL Sbjct: 290 ESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPL 349 Query: 303 PIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLA 482 P+D DLLPA+VP YRRPFRLLPYG+ PKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA Sbjct: 350 PVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLA 409 Query: 483 ASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPP 662 +IVKLWEKCE+AKIAVKRGVQNTNS +MAEELK LTGGTL+SRDK+FI LYRGKDFLP Sbjct: 410 VAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKWLTGGTLISRDKDFIVLYRGKDFLPS 469 Query: 663 AVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEFHEKS------VRKE 824 AVS+AIE+RR+ + + + HG+ TE + +A E ++ K Sbjct: 470 AVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKDHIQTHQMKS 529 Query: 825 RKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKK 1004 R+ S A++E TS KL + ++D+EG+T +E+YML+K Sbjct: 530 RQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGITNDEKYMLRK 589 Query: 1005 VGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGI 1184 +GL+MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+ + E + VA+ LEAESGGI Sbjct: 590 IGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAEILEAESGGI 649 Query: 1185 LVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQ 1364 LVAVE V +GYAIIVYRGKNY+RP LRPQTLL+K++A+KRS+EAQR +SLKLHVLKL+ Sbjct: 650 LVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSLKLHVLKLSN 709 Query: 1365 NIDDXXXXXXXXXXXNCKINHEPLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQ 1544 NI++ +N + + + T + + + EE + N + EK Sbjct: 710 NIEE--------------LNRQLVEDSATNETWSDGESSNMMVEEETE---NQHTEPEKA 752 Query: 1545 RETTQFKTSDSLGSVVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTH 1724 RE + S L ++G + D E V LT+ + D+ E Sbjct: 753 REKIELGYSSDLS-------VPSSGEENWEDD---SEGEVDPLTTSSQEYQEDESE---- 798 Query: 1725 LEKLMNYTPEYEEFDNTDLESKPE-EVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAAC 1901 + + + L+S V E S N H+ S N L + Sbjct: 799 -------SASSQRHEGNSLDSTANLSVFAETGSAN----ASSFHDRSLPHNSFLNANRKL 847 Query: 1902 AVTDKAEGYAXXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLSNRERLILRK 2081 + G +Q+ + + E G LSNRERLILRK Sbjct: 848 PGSSTGSG----------------SQISALRERKSENDG------LVTDLSNRERLILRK 885 Query: 2082 QALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKAT 2261 QAL MK+RP A+GRSNVVTG+A+ +K HFQKN LAIVNVKGRA GTS+QE++ KL++ T Sbjct: 886 QALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQEVIAKLKEET 945 Query: 2262 GAVMVSQEPNKVILYRGWEEGGED------PRGGVTKGKAYSKKSSGRVARNKNVVSPEL 2423 GA++VSQEP+KVILYRGW G E+ P V + + S+ + VSP L Sbjct: 946 GALLVSQEPSKVILYRGW--GAEEEMKSFYPNNNVK--SSINLPSTRSFVDDPPHVSPAL 1001 Query: 2424 MAAIRLECGL 2453 + AIRLECGL Sbjct: 1002 IEAIRLECGL 1011 >ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina] gi|557533064|gb|ESR44247.1| hypothetical protein CICLE_v10013715mg [Citrus clementina] Length = 1062 Score = 647 bits (1668), Expect = 0.0 Identities = 402/857 (46%), Positives = 512/857 (59%), Gaps = 35/857 (4%) Frame = +3 Query: 3 YFLTT-NTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKG 179 YFL ++ D S D+L + ++G+ K T+ DS K +N++ + L+ Sbjct: 271 YFLADESSTDGASSDDLPNQLVDDEGLDETK-THSSGADSAKPSGQSPTNKKVQQTLIHS 329 Query: 180 VGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFR 359 VGSP+K+R+ LPGEA+++EEADR+LDGLGPRF DWWG +P P+DADLLPA VPGYRRPFR Sbjct: 330 VGSPDKLRYQLPGEAELVEEADRLLDGLGPRFTDWWGYDPQPVDADLLPATVPGYRRPFR 389 Query: 360 LLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKR 539 LLPYG++PKLT+DEMT LRRLGRPLPCHFALGRN+NLQGLAA+IVKLWEKCEIAKIAVKR Sbjct: 390 LLPYGVQPKLTNDEMTTLRRLGRPLPCHFALGRNRNLQGLAAAIVKLWEKCEIAKIAVKR 449 Query: 540 GVQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKH 719 G QNTNS MMA+ELKRLTGGTLLSRD+EFI YRGKDFLPPA S+AIE+RRK H Sbjct: 450 GAQNTNSEMMAQELKRLTGGTLLSRDREFIVFYRGKDFLPPAASSAIEERRK-------H 502 Query: 720 TTHGHSSTEISPSLASKAENS--TSAGEF-----HEKSVRKERKPKSTNAVMENTSSKLF 878 + ++ P L ++ +NS + EF ++ E+K + + V +S Sbjct: 503 EFSTSNDSKEEPELGNRHDNSGDNTQDEFGCTNDQTSTMHSEQKERRSAEVAIRRTSIRL 562 Query: 879 TVXXXXXXXXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFD 1058 + + EVD+EG+TEEERYML+KVGLRMK FLL+GRRGVFD Sbjct: 563 SRALEKKAEAEKLLAELEEERPEQYEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 622 Query: 1059 GTIENMHLHWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRG 1238 GT+ENMHLHWK+RELVKI++ R E A+TLE ESGGILVAVERV++GYAII+YRG Sbjct: 623 GTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVNKGYAIILYRG 682 Query: 1239 KNYQRPADLRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCK 1418 KNY+RPA LRP+TLL K++AMKRSLEAQR +S LKL Sbjct: 683 KNYERPACLRPKTLLTKREAMKRSLEAQRRQS-----LKL-------------------- 717 Query: 1419 INHEPLTEQQRERTQFEVAQVSQVKEESEDLEINHVSSTEKQRETTQFKTSDS-----LG 1583 V ++ E L++ V K +E +T D +G Sbjct: 718 -------------------HVLELTRNIEKLKLQLV----KDKEANSLETIDESILPLVG 754 Query: 1584 SVVKPQIQK--NAGSVEFTDSPKAMEAHVSYLTSLPSDQSMDD-------LEEDTHLEKL 1736 S++ I K N + F KA + LTS S+ + D +++D E L Sbjct: 755 SIIFLMIWKSSNIPEIVFGIFFKARGECGADLTSTESNDTGDATIDGPPAIQQDKQTESL 814 Query: 1737 MNYTPEYEEFDNTDLESKPEEVVREIHSVNFQEKLERIHEDSFRGNVRLQGDAACAVTDK 1916 + + E ++ + SV+ + +L I D F V G +C Sbjct: 815 THNGISFNEIESES----------SLKSVSKESQLNMI-ADFFAEGVA-SGTPSCPDNSM 862 Query: 1917 AEGYAXXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGV-------------RFRAQPLSN 2057 R ++ E Q + +G G+ RA LSN Sbjct: 863 CSSDNEPRESSIESAKSRSSENEPIEQCFELAKGRSGLSTPIGTGNVWNENNSRAIQLSN 922 Query: 2058 RERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQEL 2237 R+RL+LRKQAL MK+RPVLA+GRSN+VTGVAKAIK HF+K LAIVNVKGRAKGTS+QE+ Sbjct: 923 RDRLLLRKQALRMKKRPVLAVGRSNIVTGVAKAIKAHFEKYPLAIVNVKGRAKGTSVQEV 982 Query: 2238 VFKLEKATGAVMVSQEPNKVILYRGWEEGGEDPRGGVTKGKAYSKKSSGRVARNKNVVSP 2417 V KLE+ATGAV+VSQEP+KVILYRGW G ED + + +K S R R VS Sbjct: 983 VAKLEEATGAVLVSQEPSKVILYRGW--GAEDESSPRGRQNSRAKLSIVRDVRPWPAVSR 1040 Query: 2418 ELMAAIRLECGLASSKE 2468 EL+AAI+LECGL +E Sbjct: 1041 ELLAAIKLECGLQGQQE 1057 >ref|XP_004489340.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X2 [Cicer arietinum] Length = 834 Score = 645 bits (1665), Expect = 0.0 Identities = 386/832 (46%), Positives = 503/832 (60%), Gaps = 15/832 (1%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGV 182 YFL+ + D D+ + +G+D ++ + +S + R ALV+GV Sbjct: 59 YFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHASHSSNIRTVKPALVQGV 118 Query: 183 GSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRL 362 G+PNKVRF LPGEA++LEE D +L+GLGPRF DWWG +P+P+DADLLPA++PG+R+PFRL Sbjct: 119 GTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRQPFRL 178 Query: 363 LPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRG 542 LPYG+K LTDDE+T L+RLGRPLPCHFALGRN+ LQGLAA+I+KLWE+CEIAKIAVKRG Sbjct: 179 LPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAIIKLWERCEIAKIAVKRG 238 Query: 543 VQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHT 722 VQNT++ +MAEE+K LTGGTLLSRDK+ I +YRGKDFLP A S+AI+ RR I++ K Sbjct: 239 VQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASSAIQQRRNVLINKVK-- 296 Query: 723 THGHSSTEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTVXXXXXX 902 SS +SP +K E EK + + K A ++ TS KL Sbjct: 297 AENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAK-----AAIKRTSIKLSQALEKKAK 351 Query: 903 XXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHL 1082 +E E+D+EG+TEEERYML+++GL+MKPFLLLGRRGVFDGT+ENMHL Sbjct: 352 AEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHL 411 Query: 1083 HWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRPAD 1262 HWKYRELVKI+ + E V+ A TLEAESGGILVAVERV +G+AIIVYRGKNY RP+ Sbjct: 412 HWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSC 471 Query: 1263 LRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHEPLTE 1442 LRP+TLLNKKQA+KRS+EAQR E+LKLHVLKL +NI N L Sbjct: 472 LRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNI-----------------NELKLQM 514 Query: 1443 QQRERTQFEVAQVSQVKEESEDLEIN-HVSSTEKQRETTQFKTSDSLGSVVKPQIQKNAG 1619 + E + ++A+ + DL I+ H S+ + + S ++ Q Sbjct: 515 VKDEASSKQIAETLR-----SDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQ------ 563 Query: 1620 SVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLESKPEE 1799 +E D + + + D +EE H+E + + +++L S PEE Sbjct: 564 HIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQ-HIELI--------DGASSNLISSPEE 614 Query: 1800 VVREIHSVNFQEKLERIHEDSFRGNVRLQGD----AACAVTDKAEGYAXXXXXXXXXXXX 1967 SV Q ++ + + QG+ A ++ Sbjct: 615 A-----SVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQERQLDEESDSVVDTGHCVS 669 Query: 1968 RKNQLESSVQGDKEQ---------RGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAI 2120 +E+SV K + S + R+ LSNRERL+LR+QAL MK+RP+LAI Sbjct: 670 NNKAMEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAI 729 Query: 2121 GRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVI 2300 G+SN VTG+AKAIK HF+K+ IVNVKGRAKGTS+ ELV KLE ATGAV+VSQEP+K+I Sbjct: 730 GKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKII 789 Query: 2301 LYRGWEEGGEDPRGGVTKGKAYSKKSS-GRVARNKNVVSPELMAAIRLECGL 2453 LYRGW G TK Y S G+ K VSPEL+ AIR+ECGL Sbjct: 790 LYRGW--------GAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIECGL 833 >ref|XP_004489339.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like isoform X1 [Cicer arietinum] Length = 1019 Score = 645 bits (1665), Expect = 0.0 Identities = 386/832 (46%), Positives = 503/832 (60%), Gaps = 15/832 (1%) Frame = +3 Query: 3 YFLTTNTIDDTSGDELVSLPNGNDGVTVDKATNLVCTDSVKSGLPIVSNREAGKALVKGV 182 YFL+ + D D+ + +G+D ++ + +S + R ALV+GV Sbjct: 244 YFLSDKVLRDDKIDDALQHMDGDDKNCDERESYSSEMNSTTHASHSSNIRTVKPALVQGV 303 Query: 183 GSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPLPIDADLLPAIVPGYRRPFRL 362 G+PNKVRF LPGEA++LEE D +L+GLGPRF DWWG +P+P+DADLLPA++PG+R+PFRL Sbjct: 304 GTPNKVRFQLPGEAELLEEVDSLLEGLGPRFTDWWGYDPVPVDADLLPAVIPGFRQPFRL 363 Query: 363 LPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLAASIVKLWEKCEIAKIAVKRG 542 LPYG+K LTDDE+T L+RLGRPLPCHFALGRN+ LQGLAA+I+KLWE+CEIAKIAVKRG Sbjct: 364 LPYGVKSNLTDDELTTLKRLGRPLPCHFALGRNRKLQGLAAAIIKLWERCEIAKIAVKRG 423 Query: 543 VQNTNSLMMAEELKRLTGGTLLSRDKEFIALYRGKDFLPPAVSTAIEDRRKPRIHRDKHT 722 VQNT++ +MAEE+K LTGGTLLSRDK+ I +YRGKDFLP A S+AI+ RR I++ K Sbjct: 424 VQNTSNKIMAEEIKHLTGGTLLSRDKDVIVIYRGKDFLPAAASSAIQQRRNVLINKVK-- 481 Query: 723 THGHSSTEISPSLASKAENSTSAGEFHEKSVRKERKPKSTNAVMENTSSKLFTVXXXXXX 902 SS +SP +K E EK + + K A ++ TS KL Sbjct: 482 AENSSSVTVSPHSEAKDMAFLKDTEIIEKRIMTKAK-----AAIKRTSIKLSQALEKKAK 536 Query: 903 XXXXXXXXXXXXXXREPEVDREGVTEEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHL 1082 +E E+D+EG+TEEERYML+++GL+MKPFLLLGRRGVFDGT+ENMHL Sbjct: 537 AEKLLAILEKVESPQEQEIDKEGITEEERYMLRRIGLKMKPFLLLGRRGVFDGTVENMHL 596 Query: 1083 HWKYRELVKIMASARGREDVYGVAKTLEAESGGILVAVERVDRGYAIIVYRGKNYQRPAD 1262 HWKYRELVKI+ + E V+ A TLEAESGGILVAVERV +G+AIIVYRGKNY RP+ Sbjct: 597 HWKYRELVKIICNQGSLESVHQTALTLEAESGGILVAVERVSKGHAIIVYRGKNYSRPSC 656 Query: 1263 LRPQTLLNKKQAMKRSLEAQRCESLKLHVLKLAQNIDDXXXXXXXXXXXNCKINHEPLTE 1442 LRP+TLLNKKQA+KRS+EAQR E+LKLHVLKL +NI N L Sbjct: 657 LRPRTLLNKKQALKRSIEAQRREALKLHVLKLDKNI-----------------NELKLQM 699 Query: 1443 QQRERTQFEVAQVSQVKEESEDLEIN-HVSSTEKQRETTQFKTSDSLGSVVKPQIQKNAG 1619 + E + ++A+ + DL I+ H S+ + + S ++ Q Sbjct: 700 VKDEASSKQIAETLR-----SDLAIDKHGGSSNSINCNSPKEASVHNQQAIEEQ------ 748 Query: 1620 SVEFTDSPKAMEAHVSYLTSLPSDQSMDDLEEDTHLEKLMNYTPEYEEFDNTDLESKPEE 1799 +E D + + + D +EE H+E + + +++L S PEE Sbjct: 749 HIELIDGVSSNSLNCNSSKEASVDNQQQAIEEQ-HIELI--------DGASSNLISSPEE 799 Query: 1800 VVREIHSVNFQEKLERIHEDSFRGNVRLQGD----AACAVTDKAEGYAXXXXXXXXXXXX 1967 SV Q ++ + + QG+ A ++ Sbjct: 800 A-----SVGNQRAIQEQYIELIDTGGARQGEPESSAGLVHQERQLDEESDSVVDTGHCVS 854 Query: 1968 RKNQLESSVQGDKEQ---------RGSKGVRFRAQPLSNRERLILRKQALTMKRRPVLAI 2120 +E+SV K + S + R+ LSNRERL+LR+QAL MK+RP+LAI Sbjct: 855 NNKAMEASVASLKSDPEPSAPVINKSSIELPSRSLYLSNRERLLLRRQALNMKKRPLLAI 914 Query: 2121 GRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQELVFKLEKATGAVMVSQEPNKVI 2300 G+SN VTG+AKAIK HF+K+ IVNVKGRAKGTS+ ELV KLE ATGAV+VSQEP+K+I Sbjct: 915 GKSNTVTGLAKAIKDHFRKHPFVIVNVKGRAKGTSVHELVSKLEHATGAVLVSQEPSKII 974 Query: 2301 LYRGWEEGGEDPRGGVTKGKAYSKKSS-GRVARNKNVVSPELMAAIRLECGL 2453 LYRGW G TK Y S G+ K VSPEL+ AIR+ECGL Sbjct: 975 LYRGW--------GAGTKPGTYLNDSKLGKDGGAKPTVSPELLEAIRIECGL 1018 >gb|AAF24608.1|AC010870_1 unknown protein [Arabidopsis thaliana] Length = 1020 Score = 642 bits (1655), Expect = 0.0 Identities = 377/799 (47%), Positives = 483/799 (60%), Gaps = 22/799 (2%) Frame = +3 Query: 123 KSGLPIVSNREAGKALVKGVGSPNKVRFLLPGEAQILEEADRMLDGLGPRFIDWWGVEPL 302 +S P ++N+ L +GVGSP+KVRF LPGE Q++EEADR+L+GLGPRF DWW +PL Sbjct: 290 ESSAPSITNKMVKPMLTQGVGSPDKVRFQLPGEVQLVEEADRLLEGLGPRFTDWWAYDPL 349 Query: 303 PIDADLLPAIVPGYRRPFRLLPYGIKPKLTDDEMTILRRLGRPLPCHFALGRNKNLQGLA 482 P+D DLLPA+VP YRRPFRLLPYG+ PKLTDDEMT +RRLGRPLPCHFALGRN+NLQGLA Sbjct: 350 PVDGDLLPAVVPDYRRPFRLLPYGVSPKLTDDEMTTIRRLGRPLPCHFALGRNRNLQGLA 409 Query: 483 ASIVKLWEKCEIAKIAVKRGVQNTNSLMMAEEL---------KRLTGGTLLSRDKEFIAL 635 +IVKLWEKCE+AKIAVKRGVQNTNS +MAEEL K LTGGTL+SRDK+FI L Sbjct: 410 VAIVKLWEKCELAKIAVKRGVQNTNSELMAEELKVVGLLLVIKWLTGGTLISRDKDFIVL 469 Query: 636 YRGKDFLPPAVSTAIEDRRKPRIHRDKHTTHGHSSTEISPSLASKAENSTSAGEFHEKS- 812 YRGKDFLP AVS+AIE+RR+ + + + HG+ TE + +A E ++ Sbjct: 470 YRGKDFLPSAVSSAIEERRRQTMIMENSSVHGNKLTENEEEIKPRAVKEDIELEAKDQKD 529 Query: 813 -----VRKERKPKSTNAVMENTSSKLFTVXXXXXXXXXXXXXXXXXXXXREPEVDREGVT 977 K R+ S A++E TS KL + ++D+EG+T Sbjct: 530 HIQTHQMKSRQRNSPEAILEKTSMKLSMALEKKANAEKVLADLENRESPQLSDIDKEGIT 589 Query: 978 EEERYMLKKVGLRMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIMASARGREDVYGVAK 1157 +E+YML+K+GL+MKPFLLLGRRGVFDGTIENMHLHWKYRELVKI+ + E + VA+ Sbjct: 590 NDEKYMLRKIGLKMKPFLLLGRRGVFDGTIENMHLHWKYRELVKIICNEYSIEAAHKVAE 649 Query: 1158 TLEAESGGILVAVERVDRGYAIIVYRGKNYQRPADLRPQTLLNKKQAMKRSLEAQRCESL 1337 LEAESGGILVAVE V +GYAIIVYRGKNY+RP LRPQTLL+K++A+KRS+EAQR +SL Sbjct: 650 ILEAESGGILVAVEMVSKGYAIIVYRGKNYERPQCLRPQTLLSKREALKRSVEAQRRKSL 709 Query: 1338 KLHVLKLAQNIDDXXXXXXXXXXXNCKINHEPLTEQQRERTQFEVAQVSQVKEESEDLEI 1517 KLHVLKL+ NI++ +N + + + T + + + EE + Sbjct: 710 KLHVLKLSNNIEE--------------LNRQLVEDSATNETWSDGESSNMMVEEETE--- 752 Query: 1518 NHVSSTEKQRETTQFKTSDSLGSVVKPQIQKNAGSVEFTDSPKAMEAHVSYLTSLPSDQS 1697 N + EK RE + S L ++G + D E V LT+ + Sbjct: 753 NQHTEPEKAREKIELGYSSDLS-------VPSSGEENWEDD---SEGEVDPLTTSSQEYQ 802 Query: 1698 MDDLEEDTHLEKLMNYTPEYEEFDNTDLESKPE-EVVREIHSVNFQEKLERIHEDSFRGN 1874 D+ E + + + L+S V E S N H+ S N Sbjct: 803 EDESE-----------SASSQRHEGNSLDSTANLSVFAETGSAN----ASSFHDRSLPHN 847 Query: 1875 VRLQGDAACAVTDKAEGYAXXXXXXXXXXXXRKNQLESSVQGDKEQRGSKGVRFRAQPLS 2054 L + + G +Q+ + + E G LS Sbjct: 848 SFLNANRKLPGSSTGSG----------------SQISALRERKSENDG------LVTDLS 885 Query: 2055 NRERLILRKQALTMKRRPVLAIGRSNVVTGVAKAIKTHFQKNALAIVNVKGRAKGTSIQE 2234 NRERLILRKQAL MK+RP A+GRSNVVTG+A+ +K HFQKN LAIVNVKGRA GTS+QE Sbjct: 886 NRERLILRKQALKMKKRPPFAVGRSNVVTGLARTLKMHFQKNPLAIVNVKGRANGTSVQE 945 Query: 2235 LVFKLEKATGAVMVSQEPNKVILYRGWEEGGED------PRGGVTKGKAYSKKSSGRVAR 2396 ++ KL++ TGA++VSQEP+KVILYRGW G E+ P V + + S+ Sbjct: 946 VIAKLKEETGALLVSQEPSKVILYRGW--GAEEEMKSFYPNNNVK--SSINLPSTRSFVD 1001 Query: 2397 NKNVVSPELMAAIRLECGL 2453 + VSP L+ AIRLECGL Sbjct: 1002 DPPHVSPALIEAIRLECGL 1020