BLASTX nr result
ID: Papaver27_contig00002938
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00002938
(617 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB54084.1| 50S ribosomal protein L13 [Morus notabilis] 175 7e-54
ref|XP_004251925.1| PREDICTED: 50S ribosomal protein L13, chloro... 171 7e-53
ref|XP_004251926.1| PREDICTED: 50S ribosomal protein L13, chloro... 171 7e-53
emb|CBI20115.3| unnamed protein product [Vitis vinifera] 172 9e-53
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro... 172 9e-53
ref|XP_006348328.1| PREDICTED: 50S ribosomal protein L13, chloro... 171 2e-52
ref|XP_004244291.1| PREDICTED: 50S ribosomal protein L13, chloro... 171 4e-52
ref|XP_007021954.1| Ribosomal protein L13 family protein [Theobr... 171 6e-52
ref|XP_006370075.1| hypothetical protein POPTR_0001s39310g [Popu... 170 7e-51
ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloro... 172 3e-50
ref|XP_007211891.1| hypothetical protein PRUPE_ppa010274mg [Prun... 171 1e-49
ref|XP_004294163.1| PREDICTED: 50S ribosomal protein L13, chloro... 168 1e-48
ref|XP_006856626.1| hypothetical protein AMTR_s00046p00228230 [A... 169 1e-48
ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana... 168 2e-48
ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloro... 166 3e-48
ref|XP_006389968.1| hypothetical protein EUTSA_v10019066mg [Eutr... 167 3e-48
gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides] 170 4e-48
ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata] g... 168 6e-48
ref|XP_002316846.2| hypothetical protein POPTR_0011s10720g [Popu... 170 6e-48
ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus... 172 1e-47
>gb|EXB54084.1| 50S ribosomal protein L13 [Morus notabilis]
Length = 251
Score = 175 bits (443), Expect(2) = 7e-54
Identities = 86/90 (95%), Positives = 89/90 (98%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAIHIRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 124 ILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 183
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 184 MKVETFDQLQQRIPERIIEHAVRGMLPKGR 213
Score = 62.4 bits (150), Expect(2) = 7e-54
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Frame = +2
Query: 143 KTPFLGFTFA-SVKPSFLVKTLXXXXSKQ---QSLSIRCQNLTAVPKDERWMFEDSEIGG 310
KTPFLGF+ A S +P TL S++ + L++RC + VP D+RW+FE SE+ G
Sbjct: 34 KTPFLGFSVALSKRPWVPPTTLRFNGSEKHGKRGLTVRCVDAPHVPVDQRWLFEQSEVNG 93
Query: 311 PDIWNK 328
PDIWNK
Sbjct: 94 PDIWNK 99
>ref|XP_004251925.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 229
Score = 171 bits (432), Expect(2) = 7e-53
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGRMASTIAIH+RGKNLATYTPSVDMGAFVIV+NAEKV VSGKKR QKLYRRHSGRPGG
Sbjct: 102 ILGRMASTIAIHMRGKNLATYTPSVDMGAFVIVVNAEKVVVSGKKRSQKLYRRHSGRPGG 161
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 162 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 191
Score = 63.2 bits (152), Expect(2) = 7e-53
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 NNKTPFLGFTFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTA-VPKDERWMFEDSEIGGP 313
+NKTPFLGF+ A+ PS L + ++ IRCQ+ A +P D+RWMFE+SEI GP
Sbjct: 20 SNKTPFLGFSMAA--PSSLTFS-----GNNRTAQIRCQDKAAYIPLDQRWMFEESEIDGP 72
Query: 314 DIWNK 328
DIWN+
Sbjct: 73 DIWNE 77
>ref|XP_004251926.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 206
Score = 171 bits (432), Expect(2) = 7e-53
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGRMASTIAIH+RGKNLATYTPSVDMGAFVIV+NAEKV VSGKKR QKLYRRHSGRPGG
Sbjct: 102 ILGRMASTIAIHMRGKNLATYTPSVDMGAFVIVVNAEKVVVSGKKRSQKLYRRHSGRPGG 161
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 162 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 191
Score = 63.2 bits (152), Expect(2) = 7e-53
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 NNKTPFLGFTFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTA-VPKDERWMFEDSEIGGP 313
+NKTPFLGF+ A+ PS L + ++ IRCQ+ A +P D+RWMFE+SEI GP
Sbjct: 20 SNKTPFLGFSMAA--PSSLTFS-----GNNRTAQIRCQDKAAYIPLDQRWMFEESEIDGP 72
Query: 314 DIWNK 328
DIWN+
Sbjct: 73 DIWNE 77
>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 172 bits (435), Expect(2) = 9e-53
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMG+FVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 247 ILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 306
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETFDQLQQRIPERIVEHAVRGMLPKGR
Sbjct: 307 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 336
Score = 61.6 bits (148), Expect(2) = 9e-53
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 146 TPFLGFTF--ASVKPSFLVKTLXXXXSKQQSLSIRCQNLTAV-PKDERWMFEDSEIGGPD 316
TPFLGF+ A+ KPSF +QS + CQ+ AV P D+RWMFE SE+ GPD
Sbjct: 169 TPFLGFSISAANPKPSF----------PRQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPD 218
Query: 317 IWNK 328
IWNK
Sbjct: 219 IWNK 222
>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
vinifera]
Length = 235
Score = 172 bits (435), Expect(2) = 9e-53
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMG+FVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 108 ILGRLASTIAIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 167
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETFDQLQQRIPERIVEHAVRGMLPKGR
Sbjct: 168 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 197
Score = 61.6 bits (148), Expect(2) = 9e-53
Identities = 33/64 (51%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Frame = +2
Query: 146 TPFLGFTF--ASVKPSFLVKTLXXXXSKQQSLSIRCQNLTAV-PKDERWMFEDSEIGGPD 316
TPFLGF+ A+ KPSF +QS + CQ+ AV P D+RWMFE SE+ GPD
Sbjct: 30 TPFLGFSISAANPKPSF----------PRQSFRVNCQDKAAVVPLDQRWMFEQSEVSGPD 79
Query: 317 IWNK 328
IWNK
Sbjct: 80 IWNK 83
>ref|XP_006348328.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
tuberosum]
Length = 234
Score = 171 bits (433), Expect(2) = 2e-52
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAIHIRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 107 ILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGG 166
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 167 MTVETFDQLQQRIPERILEHAVRGMLPKGR 196
Score = 61.2 bits (147), Expect(2) = 2e-52
Identities = 34/64 (53%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 140 NKTPFLGFTFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTA-VPKDERWMFEDSEIGGPD 316
NKT FLGF+ +S KPS +V ++ I CQ TA VP ++RWMFEDSEI GPD
Sbjct: 26 NKTLFLGFSISS-KPSIVVA------KTHRATQICCQEKTALVPLEQRWMFEDSEINGPD 78
Query: 317 IWNK 328
IWN+
Sbjct: 79 IWNE 82
>ref|XP_004244291.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
lycopersicum]
Length = 233
Score = 171 bits (434), Expect(2) = 4e-52
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAIHIRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 106 ILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRSQKLYRRHSGRPGG 165
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 166 MTVETFDQLQQRIPERILEHAVRGMLPKGR 195
Score = 60.1 bits (144), Expect(2) = 4e-52
Identities = 33/64 (51%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 140 NKTPFLGFTFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTA-VPKDERWMFEDSEIGGPD 316
NKT FLGF+ +S KPS +V ++ I CQ TA VP ++RWMFE+SEI GPD
Sbjct: 25 NKTLFLGFSISS-KPSVVVA------KTHRATQISCQEKTALVPLEQRWMFEESEINGPD 77
Query: 317 IWNK 328
IWN+
Sbjct: 78 IWNE 81
>ref|XP_007021954.1| Ribosomal protein L13 family protein [Theobroma cacao]
gi|508721582|gb|EOY13479.1| Ribosomal protein L13 family
protein [Theobroma cacao]
Length = 246
Score = 171 bits (433), Expect(2) = 6e-52
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIA+HIRGKNL TYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 121 ILGRLASTIAVHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 180
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETF+QLQQRIPERIVEHAVRGMLPKGR
Sbjct: 181 MKVETFNQLQQRIPERIVEHAVRGMLPKGR 210
Score = 59.7 bits (143), Expect(2) = 6e-52
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Frame = +2
Query: 137 NNKTPFLGF--TFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTAVPKDERWMFEDSEIGG 310
+N++PFLGF A KPS V+T SK+ + CQ+L+ V ++ERWMF++SE GG
Sbjct: 33 SNQSPFLGFFPVVALSKPSS-VRTTTLSFSKRD-FRVCCQDLSLVAENERWMFDESEAGG 90
Query: 311 PDIWN 325
PDIWN
Sbjct: 91 PDIWN 95
>ref|XP_006370075.1| hypothetical protein POPTR_0001s39310g [Populus trichocarpa]
gi|550349254|gb|ERP66644.1| hypothetical protein
POPTR_0001s39310g [Populus trichocarpa]
Length = 249
Score = 170 bits (431), Expect(2) = 7e-51
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 122 ILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 181
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 182 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 211
Score = 57.0 bits (136), Expect(2) = 7e-51
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 7/67 (10%)
Frame = +2
Query: 146 TPFL-GFTFASVKPSFLVKT-LXXXXSKQQSLSIRCQN-----LTAVPKDERWMFEDSEI 304
TPF+ GF+F+ K VKT L + +S+ +RC+ +T VP D+RW+FE+SE+
Sbjct: 30 TPFVAGFSFSQSKLKPCVKTSLFPLNNGSRSVEVRCEKKEKNVVTRVPLDQRWLFEESEL 89
Query: 305 GGPDIWN 325
GPDIWN
Sbjct: 90 NGPDIWN 96
>ref|XP_006358928.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Solanum
tuberosum]
Length = 229
Score = 172 bits (437), Expect(2) = 3e-50
Identities = 86/90 (95%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGRMASTIAIH+RGKNLATYTPSVDMGAFVIVINAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 102 ILGRMASTIAIHMRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRSQKLYRRHSGRPGG 161
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 162 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 191
Score = 52.4 bits (124), Expect(2) = 3e-50
Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 137 NNKTPFLGFTFASVKPSFLVKTLXXXXSKQQSLSIRCQNLTA-VPKDERWMFEDSEIGGP 313
+NKTPFLG + V PS L + S+ I Q+ A +P D+RWMFE+SEI GP
Sbjct: 20 SNKTPFLGLSM--VAPSSLPLSRNNRTSR-----IGYQDKAAYIPLDQRWMFEESEIDGP 72
Query: 314 DIWNK 328
DIWN+
Sbjct: 73 DIWNE 77
>ref|XP_007211891.1| hypothetical protein PRUPE_ppa010274mg [Prunus persica]
gi|462407756|gb|EMJ13090.1| hypothetical protein
PRUPE_ppa010274mg [Prunus persica]
Length = 256
Score = 171 bits (434), Expect(2) = 1e-49
Identities = 85/90 (94%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGRMASTIAI+IRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 129 ILGRMASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 188
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 189 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 218
Score = 51.6 bits (122), Expect(2) = 1e-49
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Frame = +2
Query: 143 KTPFLGFTFASVKPSFLVKT----LXXXXSKQQSLSI-RCQNLTAVPKDERWMFEDSEIG 307
KTPF+G + A + +L T + ++S + + + VP D+RWMFED E+G
Sbjct: 38 KTPFVGLSAAPPQKLWLPTTTNLGFDNGSNPRRSFEVFSTKEIARVPLDQRWMFEDDEVG 97
Query: 308 GPDIWN 325
GPDIWN
Sbjct: 98 GPDIWN 103
>ref|XP_004294163.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 260
Score = 168 bits (426), Expect(2) = 1e-48
Identities = 83/90 (92%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMGAFVIV+NA+KVAVSGKKR QKLYRRHSGRPGG
Sbjct: 133 ILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNADKVAVSGKKRNQKLYRRHSGRPGG 192
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 193 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 222
Score = 51.6 bits (122), Expect(2) = 1e-48
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 140 NKTPFLGFTFASVK----PSFLVKTLXXXXSKQQSLSIRC-QNLTAVPKDERWMFEDSEI 304
NKTPF+G + A + P+ T ++S + Q +T VP DERWM+E+ E+
Sbjct: 41 NKTPFVGLSAAQSQKLWLPTTSSLTFGNEGGSRRSFEVHSTQEMTRVPLDERWMWEEDEV 100
Query: 305 GGPDIWNK 328
G DIWNK
Sbjct: 101 DGIDIWNK 108
>ref|XP_006856626.1| hypothetical protein AMTR_s00046p00228230 [Amborella trichopoda]
gi|548860507|gb|ERN18093.1| hypothetical protein
AMTR_s00046p00228230 [Amborella trichopoda]
Length = 236
Score = 169 bits (427), Expect(2) = 1e-48
Identities = 82/90 (91%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNL TYTPSVDMGA+VIV+NAEKVAVSGKKR+QKLYRRHSGRPGG
Sbjct: 109 ILGRLASTIAIYIRGKNLPTYTPSVDMGAYVIVVNAEKVAVSGKKRMQKLYRRHSGRPGG 168
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETFDQLQ RIPERI+EHAVRGMLPKGR
Sbjct: 169 MKVETFDQLQNRIPERIIEHAVRGMLPKGR 198
Score = 50.8 bits (120), Expect(2) = 1e-48
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 218 SKQQSLSIRCQNLTAVPKDERWMFEDSEIGGPDIWNK 328
S ++ SIRCQ +P ++RWM+E EI GPDIWN+
Sbjct: 48 SLTRNFSIRCQQQVTIPAEQRWMYEPDEINGPDIWNR 84
>ref|NP_177984.1| 50S ribosomal protein L13 [Arabidopsis thaliana]
gi|75314103|sp|Q9SYL9.1|RK13_ARATH RecName: Full=50S
ribosomal protein L13, chloroplastic; AltName:
Full=CL13; AltName: Full=Protein EMBRYO DEFECTIVE 1473;
Flags: Precursor gi|4836870|gb|AAD30573.1|AC007260_4 50S
Ribosomal protein L13 [Arabidopsis thaliana]
gi|13878111|gb|AAK44133.1|AF370318_1 putative ribosomal
protein L13 [Arabidopsis thaliana]
gi|7572938|emb|CAA60775.1| ribosomal protein L13
[Arabidopsis thaliana] gi|17104781|gb|AAL34279.1|
putative ribosomal protein L13 [Arabidopsis thaliana]
gi|332198009|gb|AEE36130.1| 50S ribosomal protein L13
[Arabidopsis thaliana]
Length = 241
Score = 168 bits (425), Expect(2) = 2e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIA HIRGKNLA+YTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 114 ILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGG 173
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERIVEHAVRGMLPKGR
Sbjct: 174 MTVETFDQLQQRIPERIVEHAVRGMLPKGR 203
Score = 51.2 bits (121), Expect(2) = 2e-48
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
Frame = +2
Query: 143 KTPFLGFTFASV-KPSFLVKTLXXXXSKQQSLSIRCQ-----NLTAVPKDERWMFEDSEI 304
K+PFLGF+ ++ KPS V + ++ L ++C+ + VP ++RWMF++ E
Sbjct: 25 KSPFLGFSLTAISKPSVRV---GIYANSKRGLQVKCEAEPTTTTSLVPANQRWMFDEEEA 81
Query: 305 GGPDIWN 325
GPDIWN
Sbjct: 82 NGPDIWN 88
>ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Cucumis
sativus] gi|449518653|ref|XP_004166351.1| PREDICTED: 50S
ribosomal protein L13, chloroplastic-like [Cucumis
sativus]
Length = 248
Score = 166 bits (419), Expect(2) = 3e-48
Identities = 81/90 (90%), Positives = 86/90 (95%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIA HIRGK+L TYTPSVDMGAFVIV+NAEK+AVSGKKR QKLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGG 180
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 210
Score = 52.8 bits (125), Expect(2) = 3e-48
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2
Query: 218 SKQQSLSIRCQNLTAVPKDERWMFEDSEIGGPDIWNK 328
SK+ +L +R Q L VP ++RWMFE E+ GPDIWNK
Sbjct: 60 SKRSALQVRAQELDRVPLEQRWMFEGDELDGPDIWNK 96
>ref|XP_006389968.1| hypothetical protein EUTSA_v10019066mg [Eutrema salsugineum]
gi|557086402|gb|ESQ27254.1| hypothetical protein
EUTSA_v10019066mg [Eutrema salsugineum]
Length = 240
Score = 167 bits (424), Expect(2) = 3e-48
Identities = 83/90 (92%), Positives = 87/90 (96%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIA HIRGKNLA+YTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 113 ILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGG 172
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 173 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 202
Score = 50.8 bits (120), Expect(2) = 3e-48
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Frame = +2
Query: 137 NNKTPFLGFTFASV-KPSFLVKTLXXXXSKQQSLSIRCQ----NLTAVPKDERWMFEDSE 301
+ K+PFLGF+ ++ KPS V + ++ L ++C+ + VP ++RWMF+ E
Sbjct: 23 DRKSPFLGFSLTAISKPSVRV---GIYANAKRGLQVKCEAEQATTSLVPANQRWMFDQEE 79
Query: 302 IGGPDIWN 325
GPDIWN
Sbjct: 80 ANGPDIWN 87
>gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 241
Score = 170 bits (431), Expect(2) = 4e-48
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 114 ILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 173
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 174 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 203
Score = 47.8 bits (112), Expect(2) = 4e-48
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 5/41 (12%)
Frame = +2
Query: 218 SKQQSLSIRCQN-----LTAVPKDERWMFEDSEIGGPDIWN 325
+ ++ +RC+ +T VP D+RW+FE+SEI GPDIWN
Sbjct: 48 NSRRGFEVRCEKKDKSVVTRVPLDQRWLFEESEINGPDIWN 88
>ref|XP_002887748.1| EMB1473 [Arabidopsis lyrata subsp. lyrata]
gi|297333589|gb|EFH64007.1| EMB1473 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 168 bits (425), Expect(2) = 6e-48
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIA HIRGKNLA+YTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 115 ILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGG 174
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERIVEHAVRGMLPKGR
Sbjct: 175 MTVETFDQLQQRIPERIVEHAVRGMLPKGR 204
Score = 49.3 bits (116), Expect(2) = 6e-48
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Frame = +2
Query: 143 KTPFLGFTFASV-KPSFLVKTLXXXXSKQQSLSIRCQ------NLTAVPKDERWMFEDSE 301
K+PFLGF+ + KPS V + ++ L ++C+ + VP ++RWMF++ E
Sbjct: 25 KSPFLGFSLTAFSKPSVRV---GIYANSKRGLQVKCEAEETTTKTSLVPANQRWMFDEEE 81
Query: 302 IGGPDIWN 325
GPDIWN
Sbjct: 82 ANGPDIWN 89
>ref|XP_002316846.2| hypothetical protein POPTR_0011s10720g [Populus trichocarpa]
gi|550328124|gb|EEE97458.2| hypothetical protein
POPTR_0011s10720g [Populus trichocarpa]
Length = 241
Score = 170 bits (431), Expect(2) = 6e-48
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 114 ILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 173
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
M VETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 174 MTVETFDQLQQRIPERIIEHAVRGMLPKGR 203
Score = 47.0 bits (110), Expect(2) = 6e-48
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Frame = +2
Query: 218 SKQQSLSIRCQN-----LTAVPKDERWMFEDSEIGGPDIWN 325
+ ++ +RC+ T VP D+RW+FE+SEI GPDIWN
Sbjct: 48 NSRRGFEVRCEKKDKSVATRVPLDQRWLFEESEINGPDIWN 88
>ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus communis]
gi|223528200|gb|EEF30260.1| 50S ribosomal protein L13,
putative [Ricinus communis]
Length = 245
Score = 172 bits (437), Expect(2) = 1e-47
Identities = 85/90 (94%), Positives = 89/90 (98%)
Frame = +3
Query: 348 ILGRMASTIAIHIRGKNLATYTPSVDMGAFVIVINAEKVAVSGKKRLQKLYRRHSGRPGG 527
ILGR+ASTIAI+IRGKNLATYTPSVDMGAFVIV+NAEKVAVSGKKR QKLYRRHSGRPGG
Sbjct: 118 ILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGG 177
Query: 528 MKVETFDQLQQRIPERIVEHAVRGMLPKGR 617
MKVETFDQLQQRIPERI+EHAVRGMLPKGR
Sbjct: 178 MKVETFDQLQQRIPERIIEHAVRGMLPKGR 207
Score = 43.5 bits (101), Expect(2) = 1e-47
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 263 VPKDERWMFEDSEIGGPDIWNK 328
VP D+RWMFE+ E+ GPDIWNK
Sbjct: 72 VPVDQRWMFEEFELNGPDIWNK 93