BLASTX nr result
ID: Papaver27_contig00002515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00002515
(578 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit famil... 208 1e-51
ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citr... 202 4e-50
ref|XP_007011114.1| RNA polymerase II fifth largest subunit, put... 201 9e-50
ref|XP_006492522.1| PREDICTED: DNA-directed RNA polymerase V sub... 201 1e-49
ref|XP_006492521.1| PREDICTED: DNA-directed RNA polymerase V sub... 201 1e-49
ref|XP_006442077.1| hypothetical protein CICLE_v10021999mg [Citr... 201 1e-49
ref|XP_006442076.1| hypothetical protein CICLE_v10021999mg [Citr... 201 1e-49
ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phas... 201 2e-49
gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subun... 199 3e-49
ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Popu... 199 4e-49
ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycin... 197 2e-48
ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, I... 195 8e-48
emb|CBI30093.3| unnamed protein product [Vitis vinifera] 194 2e-47
ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, I... 194 2e-47
ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prun... 192 5e-47
ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, I... 189 4e-46
ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, I... 189 4e-46
ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V sub... 189 6e-46
ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III ... 189 6e-46
ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group] g... 187 2e-45
>ref|XP_007028544.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508717149|gb|EOY09046.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 228
Score = 208 bits (529), Expect = 1e-51
Identities = 102/183 (55%), Positives = 137/183 (74%)
Frame = -1
Query: 551 MENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFR 372
+E DG + CLSG++D GS ESHRYYL+R+T EML+DRGY VP +E+NL+L EFR
Sbjct: 6 LEGDGSNGEALGKCLSGVVDDGSTESHRYYLSRRTVLEMLRDRGYAVPISEINLSLQEFR 65
Query: 371 SIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILV 192
+IY ++PD +RLR+S ++PSKRI V+F G +K IR + GL+ +LTGLILV
Sbjct: 66 AIYGQSPDFDRLRLSATHKTDPSKRILVVFYGPGMVKVSGIRLIAGLITNKESLTGLILV 125
Query: 191 LQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDD 12
LQ+ +T QA + L LF +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++
Sbjct: 126 LQNHITNQALKALDLFSFKVEIFQITDLLVNITKHVLKPKHQVLTEQEKQKLLQKYSIEE 185
Query: 11 KQL 3
KQL
Sbjct: 186 KQL 188
>ref|XP_006442079.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|568879109|ref|XP_006492520.1| PREDICTED: DNA-directed
RNA polymerase V subunit 5A-like isoform X1 [Citrus
sinensis] gi|557544341|gb|ESR55319.1| hypothetical
protein CICLE_v10021999mg [Citrus clementina]
Length = 236
Score = 202 bits (515), Expect = 4e-50
Identities = 99/180 (55%), Positives = 140/180 (77%)
Frame = -1
Query: 542 DGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIY 363
+GEP SCLSG +D+GS +S RYYL+R+T EMLKDRGY V +E+NL++ +FR+IY
Sbjct: 20 NGEPTE---SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIY 76
Query: 362 SENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQS 183
++PD++RLRIS+ S+PSKRI V+FCG +K IR+++ + LTGLIL+LQ+
Sbjct: 77 GQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQN 136
Query: 182 EMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
++T+QA + + LFQ +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++KQL
Sbjct: 137 QITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQL 196
>ref|XP_007011114.1| RNA polymerase II fifth largest subunit, putative isoform 2
[Theobroma cacao] gi|508728027|gb|EOY19924.1| RNA
polymerase II fifth largest subunit, putative isoform 2
[Theobroma cacao]
Length = 235
Score = 201 bits (512), Expect = 9e-50
Identities = 104/181 (57%), Positives = 134/181 (74%)
Frame = -1
Query: 545 NDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSI 366
NDG P C+ M+D GSVESHR+YLARKT +EMLKDRGY+V ++EL ++ EFRS+
Sbjct: 17 NDGGAEGAQP-CIKSMVDQGSVESHRFYLARKTVWEMLKDRGYNVADSELTPSITEFRSV 75
Query: 365 YSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQ 186
+ + PDLE LRIS+ L SNPSK+I V+F GT I+K T+ L G + +L+GLIL+LQ
Sbjct: 76 FGDQPDLELLRISVSLRSNPSKKILVVFMGTNDIRKATVCALKGQI-LNESLSGLILILQ 134
Query: 185 SEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQ 6
S+M + A ++L F +ELF+I DL VNITKH LMPKHE+LT EEK+KLL KY L+DKQ
Sbjct: 135 SKMNSFALKELKNFPFKVELFKIADLYVNITKHFLMPKHEVLTAEEKQKLLKKYQLEDKQ 194
Query: 5 L 3
L
Sbjct: 195 L 195
>ref|XP_006492522.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like isoform X3
[Citrus sinensis]
Length = 224
Score = 201 bits (511), Expect = 1e-49
Identities = 98/179 (54%), Positives = 139/179 (77%)
Frame = -1
Query: 542 DGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIY 363
+GEP SCLSG +D+GS +S RYYL+R+T EMLKDRGY V +E+NL++ +FR+IY
Sbjct: 20 NGEPTE---SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIY 76
Query: 362 SENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQS 183
++PD++RLRIS+ S+PSKRI V+FCG +K IR+++ + LTGLIL+LQ+
Sbjct: 77 GQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQN 136
Query: 182 EMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQ 6
++T+QA + + LFQ +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++KQ
Sbjct: 137 QITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQ 195
>ref|XP_006492521.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like isoform X2
[Citrus sinensis]
Length = 225
Score = 201 bits (511), Expect = 1e-49
Identities = 98/179 (54%), Positives = 139/179 (77%)
Frame = -1
Query: 542 DGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIY 363
+GEP SCLSG +D+GS +S RYYL+R+T EMLKDRGY V +E+NL++ +FR+IY
Sbjct: 20 NGEPTE---SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIY 76
Query: 362 SENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQS 183
++PD++RLRIS+ S+PSKRI V+FCG +K IR+++ + LTGLIL+LQ+
Sbjct: 77 GQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQN 136
Query: 182 EMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQ 6
++T+QA + + LFQ +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++KQ
Sbjct: 137 QITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQ 195
>ref|XP_006442077.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|557544339|gb|ESR55317.1| hypothetical protein
CICLE_v10021999mg [Citrus clementina]
Length = 224
Score = 201 bits (511), Expect = 1e-49
Identities = 98/179 (54%), Positives = 139/179 (77%)
Frame = -1
Query: 542 DGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIY 363
+GEP SCLSG +D+GS +S RYYL+R+T EMLKDRGY V +E+NL++ +FR+IY
Sbjct: 20 NGEPTE---SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIY 76
Query: 362 SENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQS 183
++PD++RLRIS+ S+PSKRI V+FCG +K IR+++ + LTGLIL+LQ+
Sbjct: 77 GQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQN 136
Query: 182 EMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQ 6
++T+QA + + LFQ +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++KQ
Sbjct: 137 QITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQ 195
>ref|XP_006442076.1| hypothetical protein CICLE_v10021999mg [Citrus clementina]
gi|567899180|ref|XP_006442078.1| hypothetical protein
CICLE_v10021999mg [Citrus clementina]
gi|557544338|gb|ESR55316.1| hypothetical protein
CICLE_v10021999mg [Citrus clementina]
gi|557544340|gb|ESR55318.1| hypothetical protein
CICLE_v10021999mg [Citrus clementina]
Length = 225
Score = 201 bits (511), Expect = 1e-49
Identities = 98/179 (54%), Positives = 139/179 (77%)
Frame = -1
Query: 542 DGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIY 363
+GEP SCLSG +D+GS +S RYYL+R+T EMLKDRGY V +E+NL++ +FR+IY
Sbjct: 20 NGEPTE---SCLSGFVDNGSRDSLRYYLSRRTVLEMLKDRGYAVALSEINLSVQDFRAIY 76
Query: 362 SENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQS 183
++PD++RLRIS+ S+PSKRI V+FCG +K IR+++ + LTGLIL+LQ+
Sbjct: 77 GQDPDVDRLRISISHQSDPSKRILVVFCGPGIVKVNVIRSIISQIVNRDTLTGLILILQN 136
Query: 182 EMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQ 6
++T+QA + + LFQ +E+FQITDLLVNITKHVL PKH++LT +EK+KLL KY++++KQ
Sbjct: 137 QITSQATKAVGLFQFKVEMFQITDLLVNITKHVLKPKHQVLTDQEKEKLLKKYSIEEKQ 195
>ref|XP_007162116.1| hypothetical protein PHAVU_001G125200g [Phaseolus vulgaris]
gi|561035580|gb|ESW34110.1| hypothetical protein
PHAVU_001G125200g [Phaseolus vulgaris]
Length = 242
Score = 201 bits (510), Expect = 2e-49
Identities = 95/170 (55%), Positives = 130/170 (76%)
Frame = -1
Query: 512 CLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLERLR 333
CLS ID G+VESHRYYL+R+TT EMLKDRGY +P NE++L+L +FR ++ +PD +RLR
Sbjct: 33 CLSKFIDDGTVESHRYYLSRRTTLEMLKDRGYSIPSNEIDLSLSQFRHMHGHSPDPDRLR 92
Query: 332 ISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQDL 153
+SL +NPSKRI VIFCG +K IRN+ G + L+GLIL++++ +T+QA + +
Sbjct: 93 LSLAHATNPSKRILVIFCGPGVVKVTAIRNIAGQIVNRDTLSGLILIVENHVTSQALKAV 152
Query: 152 TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
LF +E+FQITDLLVNITKHVL PKH++LT +KK LL K+N+++KQL
Sbjct: 153 GLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDRQKKNLLKKFNIEEKQL 202
>gb|EXB41191.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 231
Score = 199 bits (507), Expect = 3e-49
Identities = 101/182 (55%), Positives = 135/182 (74%)
Frame = -1
Query: 548 ENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRS 369
E +GE L +CLS +ID GSVESHRY+L+R T EMLKDRGY VP +++NL+L +FR
Sbjct: 13 EPNGETLG---TCLSSLIDKGSVESHRYFLSRITLLEMLKDRGYSVPSSDINLSLHDFRQ 69
Query: 368 IYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVL 189
IY + PD++RLR S+ LS+PSKRI VIFC +K ++R + G + LTGLILVL
Sbjct: 70 IYGQIPDVDRLRFSVTHLSDPSKRILVIFCEPGVVKVTSVRGIAGQIVNRNTLTGLILVL 129
Query: 188 QSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDK 9
QS+MT QA++ + L +E+FQITDLL+NITKH+L PKH +LT +EK+KLL KY+++ K
Sbjct: 130 QSQMTNQAQKAVELLPFKVEIFQITDLLINITKHLLRPKHRVLTDQEKQKLLKKYSIEVK 189
Query: 8 QL 3
QL
Sbjct: 190 QL 191
>ref|XP_002323257.2| hypothetical protein POPTR_0016s03800g [Populus trichocarpa]
gi|550320761|gb|EEF05018.2| hypothetical protein
POPTR_0016s03800g [Populus trichocarpa]
Length = 243
Score = 199 bits (506), Expect = 4e-49
Identities = 96/185 (51%), Positives = 135/185 (72%)
Frame = -1
Query: 557 REMENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPE 378
+E EN + + CLS +D GS ESHRYYL+R+T EMLKDRGY VP +E++++L +
Sbjct: 19 QEKENGSFGMESLGRCLSSFVDEGSTESHRYYLSRRTVLEMLKDRGYSVPSSEIDISLQD 78
Query: 377 FRSIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLI 198
FR +Y +NPD+E L+ S S+PSKR+ VIFCG +K G IR + + + +LTGLI
Sbjct: 79 FRGVYGQNPDIELLKFSATHKSDPSKRMLVIFCGLGVVKVGMIRLITVQITDRDSLTGLI 138
Query: 197 LVLQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNL 18
LVLQ+ +T QA + L LF+ IE+FQITDLLVNITKH+L PKH++L+ + K++LL KY++
Sbjct: 139 LVLQNNITNQAMKALDLFKFKIEIFQITDLLVNITKHILKPKHQVLSEQAKQRLLKKYSI 198
Query: 17 DDKQL 3
++KQL
Sbjct: 199 EEKQL 203
>ref|NP_001236527.1| uncharacterized protein LOC100306033 [Glycine max]
gi|255627335|gb|ACU14012.1| unknown [Glycine max]
Length = 237
Score = 197 bits (501), Expect = 2e-48
Identities = 95/170 (55%), Positives = 129/170 (75%)
Frame = -1
Query: 512 CLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLERLR 333
CLS +D+GSVESHRYYL+R+TT EMLKDRGY +P +E++L+L +FR I+ + PD +RLR
Sbjct: 28 CLSKFVDNGSVESHRYYLSRRTTLEMLKDRGYSIPSHEIDLSLSDFRDIHGQFPDPDRLR 87
Query: 332 ISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQDL 153
+SL +N SKRI VIFCG +K IRN G + LTGLIL++++ +T+QA + +
Sbjct: 88 LSLTHATNSSKRILVIFCGPGVVKVTAIRNTAGQIINRDTLTGLILIVENHITSQALKAV 147
Query: 152 TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
LF +E+FQITDLLVNITKHVL PKH++LT ++K LL KYN+++KQL
Sbjct: 148 NLFSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKINLLKKYNIEEKQL 197
>ref|XP_004493418.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cicer arietinum]
Length = 244
Score = 195 bits (495), Expect = 8e-48
Identities = 94/170 (55%), Positives = 125/170 (73%)
Frame = -1
Query: 512 CLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLERLR 333
CL ID GSVESHRYYL+R+TT EMLKDRGY +P +E+ L+L EFR + +PD++RLR
Sbjct: 35 CLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDRLR 94
Query: 332 ISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQDL 153
+ +NPSKRI VIF G +K +RN+ G + LTGLIL++QS++T+QA + +
Sbjct: 95 FTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALKAV 154
Query: 152 TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
L +E+FQITDLLVNITKHVL PKH++LT ++KK LL KYN+ +KQL
Sbjct: 155 NLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQL 204
>emb|CBI30093.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 194 bits (492), Expect = 2e-47
Identities = 94/170 (55%), Positives = 127/170 (74%)
Frame = -1
Query: 512 CLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLERLR 333
CLS +D G +ESHRYYLAR+T EML+DRGY +P +++++L +FRS YS+ PD +RLR
Sbjct: 121 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 180
Query: 332 ISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQDL 153
IS L S+PSK+I VIFCG + +K IR++ + +L+ LILVLQ+ +T+QA + +
Sbjct: 181 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 240
Query: 152 TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
LF +E FQITDLLVNITKHVL PKH +LT +EK KLL KY+L++KQL
Sbjct: 241 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQL 290
>ref|XP_003632734.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Vitis vinifera]
Length = 229
Score = 194 bits (492), Expect = 2e-47
Identities = 94/170 (55%), Positives = 127/170 (74%)
Frame = -1
Query: 512 CLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLERLR 333
CLS +D G +ESHRYYLAR+T EML+DRGY +P +++++L +FRS YS+ PD +RLR
Sbjct: 20 CLSSFVDEGRIESHRYYLARRTLLEMLRDRGYSIPALDIDISLQDFRSFYSQKPDPDRLR 79
Query: 332 ISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQDL 153
IS L S+PSK+I VIFCG + +K IR++ + +L+ LILVLQ+ +T+QA + +
Sbjct: 80 ISAALRSDPSKKILVIFCGPDVVKVNAIRSIATQIVNKDSLSKLILVLQNHITSQALKAV 139
Query: 152 TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
LF +E FQITDLLVNITKHVL PKH +LT +EK KLL KY+L++KQL
Sbjct: 140 DLFSFQVEKFQITDLLVNITKHVLKPKHRVLTDQEKNKLLKKYSLNEKQL 189
>ref|XP_007202529.1| hypothetical protein PRUPE_ppa010980mg [Prunus persica]
gi|462398060|gb|EMJ03728.1| hypothetical protein
PRUPE_ppa010980mg [Prunus persica]
Length = 228
Score = 192 bits (488), Expect = 5e-47
Identities = 94/188 (50%), Positives = 131/188 (69%), Gaps = 5/188 (2%)
Frame = -1
Query: 551 MENDGEPLA-----IMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLT 387
ME D E I+ CL+G +D GS ESHRYYL+R+T EM++DRGY VP +E++L+
Sbjct: 1 MEGDAEANGDANGEILGPCLTGYVDDGSPESHRYYLSRRTVLEMIRDRGYSVPSSEIDLS 60
Query: 386 LPEFRSIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLT 207
L +FR+++ +NPD+ERLR S ++PS RI VI+CG +K IR L + L
Sbjct: 61 LQDFRALHGQNPDVERLRFSATHRTDPSDRIMVIYCGPGIVKVNVIRGLHSQIANKDTLN 120
Query: 206 GLILVLQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAK 27
GLIL+ Q+++T+QA + + L+ E+FQITDLLVNITKHVL PKH +LT +EK+KLL K
Sbjct: 121 GLILITQNQITSQALKTMELYPFKTEIFQITDLLVNITKHVLKPKHHVLTEQEKQKLLKK 180
Query: 26 YNLDDKQL 3
YN+++ QL
Sbjct: 181 YNIEENQL 188
>ref|XP_004303601.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Fragaria vesca subsp. vesca]
Length = 225
Score = 189 bits (481), Expect = 4e-46
Identities = 91/184 (49%), Positives = 130/184 (70%)
Frame = -1
Query: 554 EMENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEF 375
E EN + CLSG +D GS ESHRY+L+R+T EML+DRGY VP +E++L+L +F
Sbjct: 2 EGENGNGDEVVAGPCLSGFVDDGSTESHRYFLSRRTVLEMLRDRGYSVPSSEIDLSLQDF 61
Query: 374 RSIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLIL 195
RS++ +NPD +RL S S+PS+R+ VI+CG +K IR L + L+GLIL
Sbjct: 62 RSLHGQNPDADRLCFSTVHSSDPSERMLVIYCGPGIVKVNVIRGLHSQIANKDTLSGLIL 121
Query: 194 VLQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLD 15
+LQ ++T+QA + L L+ +E+FQITDLLVNITKHVL P+H++LT + K+ LL K+N++
Sbjct: 122 ILQGQITSQALKTLDLYPFKVEIFQITDLLVNITKHVLKPQHQVLTEQAKQALLKKFNIE 181
Query: 14 DKQL 3
+KQL
Sbjct: 182 EKQL 185
>ref|XP_004237333.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Solanum lycopersicum]
Length = 227
Score = 189 bits (481), Expect = 4e-46
Identities = 94/183 (51%), Positives = 132/183 (72%)
Frame = -1
Query: 551 MENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFR 372
M+ DGE L +CL+ +D G+VESHRY+LAR+T EMLKDRG+ +P +E++ TL EFR
Sbjct: 8 MDVDGENLG---TCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFR 64
Query: 371 SIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILV 192
Y + PD+ERLR+S ++ + ++ VIFCG +K IR++L + +L+ LILV
Sbjct: 65 EKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILV 124
Query: 191 LQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDD 12
+Q++MT A + + LF +E+FQITDLLVNITKHVL P+HE+LT EK+KLL KYNL++
Sbjct: 125 IQNQMTNPALKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEE 184
Query: 11 KQL 3
KQL
Sbjct: 185 KQL 187
>ref|XP_006364435.1| PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum
tuberosum]
Length = 227
Score = 189 bits (479), Expect = 6e-46
Identities = 93/183 (50%), Positives = 132/183 (72%)
Frame = -1
Query: 551 MENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFR 372
M+ DG+ L +CL+ +D G+VESHRY+LAR+T EMLKDRG+ +P +E++ TL EFR
Sbjct: 8 MDVDGDNLG---TCLASFVDDGTVESHRYFLARRTILEMLKDRGFAIPNSEIDTTLQEFR 64
Query: 371 SIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILV 192
Y + PD+ERLR+S ++ + ++ VIFCG +K IR++L + +L+ LILV
Sbjct: 65 EKYGQTPDVERLRVSAMHRNDLTNKVLVIFCGPNAVKVNVIRSILTQIMNKESLSRLILV 124
Query: 191 LQSEMTAQAKQDLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDD 12
+Q++MT A + + LF +E+FQITDLLVNITKHVL P+HE+LT EK+KLL KYNL++
Sbjct: 125 IQNQMTNPAMKAVELFSFKVEIFQITDLLVNITKHVLKPRHELLTDTEKEKLLKKYNLEE 184
Query: 11 KQL 3
KQL
Sbjct: 185 KQL 187
>ref|XP_003625033.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
[Medicago truncatula] gi|124359979|gb|ABN07995.1| RNA
polymerase subunit, RPB5; RNA polymerase Rpb5,
N-terminal [Medicago truncatula]
gi|355500048|gb|AES81251.1| DNA-directed RNA polymerases
I, II, and III subunit RPABC1 [Medicago truncatula]
Length = 248
Score = 189 bits (479), Expect = 6e-46
Identities = 87/172 (50%), Positives = 128/172 (74%)
Frame = -1
Query: 518 PSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEFRSIYSENPDLER 339
P CL D+GS+ESHRYYL+R+T EMLKDRGY +P +E+ L+L +FR I+ ++PD++R
Sbjct: 37 PQCLFTKKDNGSIESHRYYLSRRTVLEMLKDRGYSIPSDEIQLSLDDFRQIHGQSPDVDR 96
Query: 338 LRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLILVLQSEMTAQAKQ 159
LR++ +NPSKRI V+F G +K +R++ G + +LTGLIL++Q+++T+QA +
Sbjct: 97 LRLTATHATNPSKRILVVFSGPGIVKVNGVRDIAGQIVNRESLTGLILIVQNQITSQALK 156
Query: 158 DLTLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNLDDKQL 3
+ L +E+FQITDLLVN TKHVL PKH++LT ++KK LL KY++ +KQL
Sbjct: 157 AVNLLSFKVEIFQITDLLVNATKHVLKPKHQVLTDKQKKNLLKKYDIQEKQL 208
>ref|NP_001065723.1| Os11g0143400 [Oryza sativa Japonica Group]
gi|77548620|gb|ABA91417.1| RNA polymerase Rpb5,
N-terminal domain containing protein, expressed [Oryza
sativa Japonica Group] gi|113644427|dbj|BAF27568.1|
Os11g0143400 [Oryza sativa Japonica Group]
gi|125576186|gb|EAZ17408.1| hypothetical protein
OsJ_32930 [Oryza sativa Japonica Group]
Length = 227
Score = 187 bits (475), Expect = 2e-45
Identities = 92/185 (49%), Positives = 136/185 (73%), Gaps = 1/185 (0%)
Frame = -1
Query: 554 EMENDGEPLAIMPSCLSGMIDSGSVESHRYYLARKTTFEMLKDRGYDVPENELNLTLPEF 375
EME D + +P C++ MID GSVESHR +LAR+T EML+DRGY VPE E+ TLPEF
Sbjct: 4 EMEVDDVDVHEVPECIASMIDRGSVESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEF 63
Query: 374 RSIYSENPDLERLRISLPLLSNPSKRISVIFCGTEKIKKGTIRNLLGLVGEGANLTGLIL 195
R+ ++E P +ERL + L+S+PSK++ ++FC E +K TIR + L + NL+ L+L
Sbjct: 64 RAWWAEKPGIERLAFTTTLVSDPSKKVQLVFCPPEPVKIATIREIY-LQTKEENLSRLVL 122
Query: 194 VLQSEMTAQAKQDL-TLFQVSIELFQITDLLVNITKHVLMPKHEILTPEEKKKLLAKYNL 18
+LQS++ ++A++ + +F+ +++FQ TDLLVNITKHVL PKHE+L+ ++K KLL +YN+
Sbjct: 123 ILQSKILSRAREAIKEIFKFKVDIFQATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNV 182
Query: 17 DDKQL 3
+D QL
Sbjct: 183 EDSQL 187