BLASTX nr result

ID: Papaver27_contig00002439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00002439
         (1838 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006368290.1| 60S ribosomal protein L13 [Populus trichocar...    55   5e-06

>ref|XP_006368290.1| 60S ribosomal protein L13 [Populus trichocarpa]
            gi|550346195|gb|ERP64859.1| 60S ribosomal protein L13
            [Populus trichocarpa]
          Length = 207

 Score = 55.1 bits (131), Expect(2) = 5e-06
 Identities = 31/44 (70%), Positives = 32/44 (72%)
 Frame = +2

Query: 890  NKSFEGLQTIVQRLKTYKAKLVVFPRRAGKPLSSVLSKDSDSQP 1021
            N+S EGLQT VQRLKTYKAKLVVFPRRA K      SK  DS P
Sbjct: 103  NRSLEGLQTNVQRLKTYKAKLVVFPRRARK------SKAGDSAP 140



 Score = 24.3 bits (51), Expect(2) = 5e-06
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = +1

Query: 847 KGAGIPKNLAPT 882
           K AGIPK LAPT
Sbjct: 81  KAAGIPKKLAPT 92


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