BLASTX nr result

ID: Papaver27_contig00002432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00002432
         (700 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...    47   6e-07
ref|XP_002322854.2| hypothetical protein POPTR_0016s08640g [Popu...    46   3e-06

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score = 47.0 bits (110), Expect(2) = 6e-07
 Identities = 27/56 (48%), Positives = 36/56 (64%)
 Frame = +2

Query: 212  LSFSKKDLNIHDIQSLDPGLGRVLLEFQALGYRKRILGPISAFCVENRMLEL*MSF 379
            L+   ++L+++DIQS DP LGRVLLEFQAL  RKR L  +   C E    ++ M F
Sbjct: 1316 LAILGQELSVYDIQSFDPELGRVLLEFQALIDRKRYLETV---CGEKSTFDVDMCF 1368



 Score = 33.1 bits (74), Expect(2) = 6e-07
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = +3

Query: 129  APSGLFPRPLAATMELSNGVR-SRVVKEACL 218
            +PSGLFPRP ++T+  SNG+  S V K+  L
Sbjct: 1260 SPSGLFPRPWSSTLSTSNGIEFSDVTKQFVL 1290


>ref|XP_002322854.2| hypothetical protein POPTR_0016s08640g [Populus trichocarpa]
            gi|550321128|gb|EEF04615.2| hypothetical protein
            POPTR_0016s08640g [Populus trichocarpa]
          Length = 1545

 Score = 45.8 bits (107), Expect(2) = 3e-06
 Identities = 21/34 (61%), Positives = 28/34 (82%)
 Frame = +2

Query: 224  KKDLNIHDIQSLDPGLGRVLLEFQALGYRKRILG 325
            +++LN++DIQS DP LGR LLEFQAL  RK+ +G
Sbjct: 1282 QQELNLYDIQSFDPELGRTLLEFQALVNRKKNMG 1315



 Score = 32.0 bits (71), Expect(2) = 3e-06
 Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
 Frame = +3

Query: 75   HLKFLEVINKSGKMQNL-GAPSGLFPRPLAATMELSNGVR-SRVVKE 209
            H+ F  + N   +   +  +P GLFPRP + T++ S+GV+ S V+K+
Sbjct: 1204 HISFPTIENLQAEYSGIVKSPFGLFPRPWSPTVDASDGVQFSEVIKK 1250


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