BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00002009
         (1269 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   415   e-113
ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   414   e-113
emb|CBI29343.3| unnamed protein product [Vitis vinifera]              402   e-109
ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus ...   398   e-108
ref|XP_007011321.1| Pseudouridine synthase family protein isofor...   390   e-106
ref|XP_007011320.1| Pseudouridine synthase isoform 1 [Theobroma ...   390   e-106
ref|XP_007143600.1| hypothetical protein PHAVU_007G085300g [Phas...   389   e-105
ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   389   e-105
ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   389   e-105
ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   389   e-105
ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   389   e-105
ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   387   e-105
ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citr...   387   e-105
ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   387   e-105
ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   386   e-104
ref|XP_002302151.1| tRNA pseudouridine synthase family protein [...   380   e-103
ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   378   e-102
ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   377   e-102
ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthas...   377   e-102
gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hy...   377   e-102

>ref|XP_004496407.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1 [Cicer
            arietinum]
          Length = 428

 Score =  415 bits (1067), Expect = e-113
 Identities = 215/361 (59%), Positives = 263/361 (72%), Gaps = 5/361 (1%)
 Frame = +2

Query: 200  SLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNKNS 379
            +L+ RVKELE ENA+LL+++++CHC K+EK L               K+ + + ++NK S
Sbjct: 14   TLQARVKELEAENANLLSRLADCHCSKIEKKL----------YGHDGKATEPK-KANKKS 62

Query: 380  DIQGGIKPIHKIRTRRQERVKKGY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE-NPT 553
                          + +   K GY  + + N+ +RYVALK+MYFGKR  GF+ E +  PT
Sbjct: 63   --------------KEKIEKKPGYNTRFMSNHSKRYVALKVMYFGKRFYGFASEAQMQPT 108

Query: 554  VESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHENCK- 730
            VESE+F+AL   RLLV DK ESQYSRCGRTDKGVSSVGQVIAL LRS+LK +G +     
Sbjct: 109  VESEIFQALEEARLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSRLKISGVNNGSSG 168

Query: 731  --PTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTNLDT 904
                +  ++ EIDYVRVLNR LPNDIR++GWCPVP DFHARFSCLSREYKY FW  NL+ 
Sbjct: 169  DIVLEEQHEGEIDYVRVLNRVLPNDIRILGWCPVPVDFHARFSCLSREYKYFFWKENLNI 228

Query: 905  LSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIKGSA 1084
            L+M+ AGTKF+GEHDFRNFCKMDA NVH+YMR I  F IS  D     +QLWA+ IKGSA
Sbjct: 229  LAMESAGTKFLGEHDFRNFCKMDAANVHNYMRRITMFKISPTDVSYDGNQLWAIKIKGSA 288

Query: 1085 FLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFKDLN 1264
            FLWHQVRCMVAVLF++G+GLESP + D LLDTN+IPRKPQY MA+E+PLVLQSCEFKD+ 
Sbjct: 289  FLWHQVRCMVAVLFLVGKGLESPDITDLLLDTNRIPRKPQYTMASEVPLVLQSCEFKDVK 348

Query: 1265 F 1267
            F
Sbjct: 349  F 349


>ref|XP_004496408.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2 [Cicer
            arietinum]
          Length = 427

 Score =  414 bits (1065), Expect = e-113
 Identities = 215/360 (59%), Positives = 263/360 (73%), Gaps = 4/360 (1%)
 Frame = +2

Query: 200  SLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNKNS 379
            +L+ RVKELE ENA+LL+++++CHC K+EK L               K+ + + ++NK S
Sbjct: 14   TLQARVKELEAENANLLSRLADCHCSKIEKKL----------YGHDGKATEPK-KANKKS 62

Query: 380  DIQGGIKPIHKIRTRRQERVKKGY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE-NPT 553
                          + +   K GY  + + N+ +RYVALK+MYFGKR  GF+ E +  PT
Sbjct: 63   --------------KEKIEKKPGYNTRFMSNHSKRYVALKVMYFGKRFYGFASEAQMQPT 108

Query: 554  VESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHENCKP 733
            VESE+F+AL   RLLV DK ESQYSRCGRTDKGVSSVGQVIAL LRS+LK +G +     
Sbjct: 109  VESEIFQALEEARLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSRLKISGVNNGSSG 168

Query: 734  TQAMYDK--EIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTNLDTL 907
               + ++  EIDYVRVLNR LPNDIR++GWCPVP DFHARFSCLSREYKY FW  NL+ L
Sbjct: 169  DIVLEEQHGEIDYVRVLNRVLPNDIRILGWCPVPVDFHARFSCLSREYKYFFWKENLNIL 228

Query: 908  SMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIKGSAF 1087
            +M+ AGTKF+GEHDFRNFCKMDA NVH+YMR I  F IS  D     +QLWA+ IKGSAF
Sbjct: 229  AMESAGTKFLGEHDFRNFCKMDAANVHNYMRRITMFKISPTDVSYDGNQLWAIKIKGSAF 288

Query: 1088 LWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFKDLNF 1267
            LWHQVRCMVAVLF++G+GLESP + D LLDTN+IPRKPQY MA+E+PLVLQSCEFKD+ F
Sbjct: 289  LWHQVRCMVAVLFLVGKGLESPDITDLLLDTNRIPRKPQYTMASEVPLVLQSCEFKDVKF 348


>emb|CBI29343.3| unnamed protein product [Vitis vinifera]
          Length = 466

 Score =  402 bits (1032), Expect = e-109
 Identities = 220/388 (56%), Positives = 263/388 (67%), Gaps = 21/388 (5%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            D IS L S+L SL+ RV+ELE ENA L +QIS+CHC K+ + L  I +          K 
Sbjct: 17   DLISTLQSQLLSLRNRVQELEAENAKLSSQISSCHCHKIREKLDSISLVQQSDEL---KP 73

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKRLNG 526
            G  E R  K   ++G I   +              M+++++  +RYVALK+MYFG R  G
Sbjct: 74   GGDETRKKK---LKGKIPGTN--------------MRTMNHISKRYVALKVMYFGPRFYG 116

Query: 527  FSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK 703
            F+ E   +PTVESE+F+AL  T L V DK E QYSRCGRTDKGVSSVGQVIAL LRS LK
Sbjct: 117  FASEAHMDPTVESEIFKALEKTWLAVGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNLK 176

Query: 704  HTG-EHENCKPT--QAMYDK-----------------EIDYVRVLNRALPNDIRVIGWCP 823
              G   EN K    +  Y++                 EIDY+RVLNR LP DIRV+GWCP
Sbjct: 177  EIGAREENSKEVVPEEQYEERREVKDEGGGDSLASEGEIDYMRVLNRVLPKDIRVMGWCP 236

Query: 824  VPSDFHARFSCLSREYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRN 1003
            VP  FHARFSCLSREYKY FW  NL+ L+M+ AG KFVGEHDFRNFCKMDAVNVH+Y R+
Sbjct: 237  VPIGFHARFSCLSREYKYFFWRGNLNILAMESAGKKFVGEHDFRNFCKMDAVNVHNYRRH 296

Query: 1004 IISFDISSCDERSGESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTN 1183
            IISF+I+  + R   +QLWA+ IKGSAFLWHQVRCMVAVLFMIG+GLESP V+D LLDT 
Sbjct: 297  IISFEIAPTNNRYDGNQLWAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPDVVDALLDTE 356

Query: 1184 KIPRKPQYVMATELPLVLQSCEFKDLNF 1267
            +  RKPQY MA E+PLVL+SCEF+ L F
Sbjct: 357  RTSRKPQYAMAPEIPLVLESCEFEGLKF 384


>ref|XP_002527109.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223533532|gb|EEF35272.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 438

 Score =  398 bits (1023), Expect = e-108
 Identities = 211/371 (56%), Positives = 260/371 (70%), Gaps = 4/371 (1%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            + I  L S++ SLK +VKELE ENA L + ++NC C + E+ L                 
Sbjct: 26   EVIIKLKSQIASLKSKVKELEAENAKLSSTLANCRCNQAEEKL----------------- 68

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKRLNG 526
                       ++  G   I  I+ +  E+        ++++ +RYVALK+MYFG+R  G
Sbjct: 69   -----------NVSTGEHNIKNIKKKTIEKNSGHATTIMNHHLKRYVALKVMYFGQRFYG 117

Query: 527  FSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK 703
            FS EG+ +PTVESE+F+AL  TRLL+ DK E QYSRCGRTDKGVS+VGQVIALLLRSK+K
Sbjct: 118  FSSEGQMDPTVESEIFKALERTRLLIGDKKEIQYSRCGRTDKGVSAVGQVIALLLRSKVK 177

Query: 704  ---HTGEHENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYK 874
                 G+      +Q   + EIDYVRVLNR LPNDIR+IGWCPVP+DF ARFSCLSREYK
Sbjct: 178  DIDEIGKVFGETASQKHSEGEIDYVRVLNRVLPNDIRIIGWCPVPNDFSARFSCLSREYK 237

Query: 875  YLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQ 1054
            Y F   NL+ L+M+ AG KF+GEHDFRNFCKMDA+NVH+Y RNI SF+IS C ER   +Q
Sbjct: 238  YFFRGDNLNLLAMESAGKKFIGEHDFRNFCKMDAMNVHNYRRNITSFEISPCHERYEGNQ 297

Query: 1055 LWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLV 1234
            L+A+ I+GSAFLWHQVRCMVAVLFMIG+GLESP VID LLDT + PRKPQY MA E+PLV
Sbjct: 298  LFAIKIRGSAFLWHQVRCMVAVLFMIGQGLESPDVIDVLLDTVRTPRKPQYPMAPEIPLV 357

Query: 1235 LQSCEFKDLNF 1267
            L SC+F+ L F
Sbjct: 358  LHSCDFEGLQF 368


>ref|XP_007011321.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508728234|gb|EOY20131.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 478

 Score =  390 bits (1001), Expect = e-106
 Identities = 207/374 (55%), Positives = 258/374 (68%), Gaps = 6/374 (1%)
 Frame = +2

Query: 164  GDAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEK--SLSQIVVXXXXXXXXX 337
            GD ++ + S+L+SL+ RVKELE ENA L AQ+S C C K EK  + S +           
Sbjct: 10   GDVVAMMQSQLQSLQNRVKELEAENAKLSAQLSKCCCHKTEKMHNGSDVKCFNSSVASQR 69

Query: 338  RKSGDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKR 517
            + +GD + R  K S                 ER+    ++ + ++ +RYVALK+MYFGKR
Sbjct: 70   KNNGDDKTRKKKAS-----------------ERIPGYNLEIMTHHSKRYVALKVMYFGKR 112

Query: 518  LNGFSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRS 694
              GF+ E + +PTVESE+F+AL  TRLLV DK ES YSRCGRTDKGVS+VGQVIAL LRS
Sbjct: 113  FYGFASEAQMDPTVESEIFKALEKTRLLVGDKKESLYSRCGRTDKGVSAVGQVIALYLRS 172

Query: 695  KLKHTGEHENCKP---TQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSR 865
             LK    ++       +    + EIDYVRVLNR LPNDIR++GW PV  DF+ARFSCL+R
Sbjct: 173  NLKEADANDQTSGELISGTRTEGEIDYVRVLNRVLPNDIRILGWSPVSIDFNARFSCLAR 232

Query: 866  EYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSG 1045
            EY Y FW  NL+   M+ AG KF+GEHDFRNFCKMDA NVH+Y R +  F+ISS + R  
Sbjct: 233  EYTYFFWRGNLNFPDMENAGKKFIGEHDFRNFCKMDAANVHNYRRRVTLFEISSSNMRFE 292

Query: 1046 ESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATEL 1225
             +QL  + +KGSAFLWHQVRCMVAVLFMIG+G+ES +VID LLDT K PRKPQY MA E+
Sbjct: 293  GNQLCVIKVKGSAFLWHQVRCMVAVLFMIGQGVESIAVIDALLDTEKTPRKPQYAMAPEI 352

Query: 1226 PLVLQSCEFKDLNF 1267
            PLVLQSC+F+D+NF
Sbjct: 353  PLVLQSCDFEDVNF 366


>ref|XP_007011320.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
            gi|508728233|gb|EOY20130.1| Pseudouridine synthase
            isoform 1 [Theobroma cacao]
          Length = 445

 Score =  390 bits (1001), Expect = e-106
 Identities = 207/374 (55%), Positives = 258/374 (68%), Gaps = 6/374 (1%)
 Frame = +2

Query: 164  GDAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEK--SLSQIVVXXXXXXXXX 337
            GD ++ + S+L+SL+ RVKELE ENA L AQ+S C C K EK  + S +           
Sbjct: 10   GDVVAMMQSQLQSLQNRVKELEAENAKLSAQLSKCCCHKTEKMHNGSDVKCFNSSVASQR 69

Query: 338  RKSGDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKR 517
            + +GD + R  K S                 ER+    ++ + ++ +RYVALK+MYFGKR
Sbjct: 70   KNNGDDKTRKKKAS-----------------ERIPGYNLEIMTHHSKRYVALKVMYFGKR 112

Query: 518  LNGFSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRS 694
              GF+ E + +PTVESE+F+AL  TRLLV DK ES YSRCGRTDKGVS+VGQVIAL LRS
Sbjct: 113  FYGFASEAQMDPTVESEIFKALEKTRLLVGDKKESLYSRCGRTDKGVSAVGQVIALYLRS 172

Query: 695  KLKHTGEHENCKP---TQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSR 865
             LK    ++       +    + EIDYVRVLNR LPNDIR++GW PV  DF+ARFSCL+R
Sbjct: 173  NLKEADANDQTSGELISGTRTEGEIDYVRVLNRVLPNDIRILGWSPVSIDFNARFSCLAR 232

Query: 866  EYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSG 1045
            EY Y FW  NL+   M+ AG KF+GEHDFRNFCKMDA NVH+Y R +  F+ISS + R  
Sbjct: 233  EYTYFFWRGNLNFPDMENAGKKFIGEHDFRNFCKMDAANVHNYRRRVTLFEISSSNMRFE 292

Query: 1046 ESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATEL 1225
             +QL  + +KGSAFLWHQVRCMVAVLFMIG+G+ES +VID LLDT K PRKPQY MA E+
Sbjct: 293  GNQLCVIKVKGSAFLWHQVRCMVAVLFMIGQGVESIAVIDALLDTEKTPRKPQYAMAPEI 352

Query: 1226 PLVLQSCEFKDLNF 1267
            PLVLQSC+F+D+NF
Sbjct: 353  PLVLQSCDFEDVNF 366


>ref|XP_007143600.1| hypothetical protein PHAVU_007G085300g [Phaseolus vulgaris]
            gi|561016790|gb|ESW15594.1| hypothetical protein
            PHAVU_007G085300g [Phaseolus vulgaris]
          Length = 427

 Score =  389 bits (999), Expect = e-105
 Identities = 208/360 (57%), Positives = 253/360 (70%), Gaps = 4/360 (1%)
 Frame = +2

Query: 200  SLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNKNS 379
            SL+ RVKELE+ENA LLAQ+++CH  +++K L                  + + R +K  
Sbjct: 13   SLQARVKELEIENAKLLAQLADCHSHEVDKKLH---------------GPEGKGRESK-- 55

Query: 380  DIQGGIKPIHKIRTRRQERVKKGYMKSLHNY-PQRYVALKMMYFGKRLNGFSCEGE-NPT 553
              +G +K   KI     E  K GY  S  ++  +RYVALK+MYFGKR  GF+ E +  PT
Sbjct: 56   --EGNMKFEKKI-----EEKKPGYDTSFMSHRSKRYVALKVMYFGKRFYGFASEAQMQPT 108

Query: 554  VESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHENC-- 727
            VE ELF+A   TRLLV DK ESQYSRCGRTDKGVSSVGQVIAL LRS LK +  +     
Sbjct: 109  VEFELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKLSAINNGSSG 168

Query: 728  KPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTNLDTL 907
            +     ++ EIDYVRVLNR LP+DIR++GWCP P DFHARFSCLSREYKY FW   L+  
Sbjct: 169  EVLDEKHEGEIDYVRVLNRVLPHDIRILGWCPAPVDFHARFSCLSREYKYFFWKEKLNIP 228

Query: 908  SMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIKGSAF 1087
            +M+ AG K +G HDFRNFCKMDA NVH+Y R+I  F+IS  D R   +QLW + IKGSAF
Sbjct: 229  AMESAGNKLIGTHDFRNFCKMDAANVHNYRRHITLFEISPTDVRYNGNQLWVIKIKGSAF 288

Query: 1088 LWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFKDLNF 1267
            LWHQVRCMVAVLFM+G+GLESP+VID LLDT +I RKPQY+MA+E+PLVLQ CEF D+ F
Sbjct: 289  LWHQVRCMVAVLFMVGKGLESPNVIDMLLDTTRIVRKPQYIMASEVPLVLQCCEFDDIKF 348


>ref|XP_006589472.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X4
            [Glycine max]
          Length = 415

 Score =  389 bits (998), Expect = e-105
 Identities = 205/364 (56%), Positives = 253/364 (69%), Gaps = 6/364 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + SL+ RVKELE ENA LL+Q+++C   ++EK +               + G    + N+
Sbjct: 11   ITSLQARVKELETENAKLLSQLADCRSHEMEKKV-----------YVPDERGGKSKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+MYFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK--HTGE 715
              PTVESELF+A   TRLLV +K ESQYSRCGRTDKGVSSVGQVIAL LRS LK   T  
Sbjct: 104  MEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNN 163

Query: 716  HENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTN 895
              +       ++ EIDYVRVLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  N
Sbjct: 164  GNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKEN 223

Query: 896  LDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIK 1075
            L+  +M+ AG K VGEHDFRNFCKMDA NVH+Y R I  F+IS  D R  ++QLW + I+
Sbjct: 224  LNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIR 283

Query: 1076 GSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFK 1255
            GSAFLWHQVRCMV VLFM+G+GLESP+VID LLDT +I RKPQY MA+E+PLVLQSCEF 
Sbjct: 284  GSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFD 343

Query: 1256 DLNF 1267
            ++ F
Sbjct: 344  NIKF 347


>ref|XP_006589471.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X3
            [Glycine max]
          Length = 420

 Score =  389 bits (998), Expect = e-105
 Identities = 205/364 (56%), Positives = 253/364 (69%), Gaps = 6/364 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + SL+ RVKELE ENA LL+Q+++C   ++EK +               + G    + N+
Sbjct: 11   ITSLQARVKELETENAKLLSQLADCRSHEMEKKV-----------YVPDERGGKSKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+MYFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK--HTGE 715
              PTVESELF+A   TRLLV +K ESQYSRCGRTDKGVSSVGQVIAL LRS LK   T  
Sbjct: 104  MEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNN 163

Query: 716  HENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTN 895
              +       ++ EIDYVRVLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  N
Sbjct: 164  GNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKEN 223

Query: 896  LDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIK 1075
            L+  +M+ AG K VGEHDFRNFCKMDA NVH+Y R I  F+IS  D R  ++QLW + I+
Sbjct: 224  LNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIR 283

Query: 1076 GSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFK 1255
            GSAFLWHQVRCMV VLFM+G+GLESP+VID LLDT +I RKPQY MA+E+PLVLQSCEF 
Sbjct: 284  GSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFD 343

Query: 1256 DLNF 1267
            ++ F
Sbjct: 344  NIKF 347


>ref|XP_003555416.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Glycine max]
          Length = 426

 Score =  389 bits (998), Expect = e-105
 Identities = 205/364 (56%), Positives = 254/364 (69%), Gaps = 6/364 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + +L+ R KELE ENA LL+Q+++C C ++EK L               + G    + N+
Sbjct: 11   IATLQARAKELEAENAKLLSQLADCRCHEMEKKLH-----------IPDEKGRESKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+ YFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSKRYVALKVTYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK--HTGE 715
              PTVESELF+A   TRLLV DK ESQYSRCGRTDKGVSSVGQVIAL LRS LK   T  
Sbjct: 104  MEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNN 163

Query: 716  HENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTN 895
              +       ++ EIDYV VLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  N
Sbjct: 164  GNSGVVLDEQHEGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKEN 223

Query: 896  LDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIK 1075
            L+  +++ AG K VGEHDFRNFCKMDA NVH+Y R I  F+ISS D R  ++QLW + I+
Sbjct: 224  LNIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIR 283

Query: 1076 GSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFK 1255
            GSAFLWHQVRCMVAVLFM+G+GLESP+VID LLDT++I RKPQY MA+E+PLVLQSCEF 
Sbjct: 284  GSAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFD 343

Query: 1256 DLNF 1267
            ++ F
Sbjct: 344  NIKF 347


>ref|XP_003535557.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Glycine max]
          Length = 426

 Score =  389 bits (998), Expect = e-105
 Identities = 205/364 (56%), Positives = 253/364 (69%), Gaps = 6/364 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + SL+ RVKELE ENA LL+Q+++C   ++EK +               + G    + N+
Sbjct: 11   ITSLQARVKELETENAKLLSQLADCRSHEMEKKV-----------YVPDERGGKSKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+MYFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK--HTGE 715
              PTVESELF+A   TRLLV +K ESQYSRCGRTDKGVSSVGQVIAL LRS LK   T  
Sbjct: 104  MEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISETNN 163

Query: 716  HENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTN 895
              +       ++ EIDYVRVLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  N
Sbjct: 164  GNSGVVLDEQHEGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKEN 223

Query: 896  LDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIK 1075
            L+  +M+ AG K VGEHDFRNFCKMDA NVH+Y R I  F+IS  D R  ++QLW + I+
Sbjct: 224  LNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIR 283

Query: 1076 GSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFK 1255
            GSAFLWHQVRCMV VLFM+G+GLESP+VID LLDT +I RKPQY MA+E+PLVLQSCEF 
Sbjct: 284  GSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFD 343

Query: 1256 DLNF 1267
            ++ F
Sbjct: 344  NIKF 347


>ref|XP_006473155.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Citrus sinensis]
          Length = 437

 Score =  387 bits (995), Expect = e-105
 Identities = 207/371 (55%), Positives = 259/371 (69%), Gaps = 4/371 (1%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            + IS+L  ++++L+ RVKELE +NA LL+++S C C+K+E  +   V           + 
Sbjct: 7    ELISSLQWQVEALQNRVKELEADNAKLLSKLSLCRCEKIEDKVHDGV-----------ED 55

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKRLNG 526
            G   +  N+ ++  GG K   K       +VK+    +L+++ +RYVALK+MYFG+R  G
Sbjct: 56   GTTLVEENRKTE-SGGCKTGKK-------KVKEKMSGTLNHHFKRYVALKVMYFGQRFYG 107

Query: 527  FSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK 703
            F+ +G   PTVESE+F+AL  TRLLV DK ES YSRCGRTDKGVSSVGQVIA+ LRS +K
Sbjct: 108  FASDGNMEPTVESEIFKALEKTRLLVADKKESHYSRCGRTDKGVSSVGQVIAIYLRSNIK 167

Query: 704  HTGEHENCKPT---QAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYK 874
                +         +   + EIDYVRVLNR LP DIRVIGW P P+DF ARFSC+SREYK
Sbjct: 168  ECNTNNASMGETVQEEQIEDEIDYVRVLNRVLPKDIRVIGWSPAPTDFSARFSCISREYK 227

Query: 875  YLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQ 1054
            Y FW  NL+  +M+ AG KFVGEHDFRNFCKMDA NVH+Y R + SF+IS C      +Q
Sbjct: 228  YFFWRENLNLSAMESAGKKFVGEHDFRNFCKMDAANVHNYKRRVTSFEISPCYISFEGNQ 287

Query: 1055 LWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLV 1234
            L A+ I+GSAFLWHQVRCMVAVLFMIG+GLES  VI+ LLDTN IPRKPQY MA E+PLV
Sbjct: 288  LCAIKIRGSAFLWHQVRCMVAVLFMIGQGLESIDVIESLLDTNGIPRKPQYNMAPEIPLV 347

Query: 1235 LQSCEFKDLNF 1267
            LQSCEF+ L F
Sbjct: 348  LQSCEFEGLKF 358


>ref|XP_006434555.1| hypothetical protein CICLE_v10001190mg [Citrus clementina]
            gi|557536677|gb|ESR47795.1| hypothetical protein
            CICLE_v10001190mg [Citrus clementina]
          Length = 437

 Score =  387 bits (994), Expect = e-105
 Identities = 206/371 (55%), Positives = 260/371 (70%), Gaps = 4/371 (1%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            + IS+L S+L++L+ RVKELE +NA LL+++S C C+K+E  +   V           + 
Sbjct: 7    ELISSLQSQLEALQNRVKELEADNAKLLSKLSLCRCEKIEDKVHDGV-----------ED 55

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKRLNG 526
            G   +  N+ ++  GG K   K       +VK+    +L+++ +RYVALK+MYFG+R  G
Sbjct: 56   GTTLVEENRKTE-SGGCKTGKK-------KVKEKMSGTLNHHFKRYVALKVMYFGQRFYG 107

Query: 527  FSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK 703
            F+ +G   PTVESE+F+AL  TRLLV DK ES YSRCGRTDKGVSSVGQVIA+ LRS +K
Sbjct: 108  FASDGNMEPTVESEIFKALEKTRLLVADKKESHYSRCGRTDKGVSSVGQVIAIYLRSNIK 167

Query: 704  HTGEHENCKPT---QAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYK 874
                +         +   + EIDYVRVLNR LP DIRV+GW P P+DF ARFSC+SR+YK
Sbjct: 168  ECNTNNASMGETVQEEQIEDEIDYVRVLNRVLPKDIRVMGWSPAPTDFSARFSCISRKYK 227

Query: 875  YLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQ 1054
            Y FW  NL+  +M+ AG KFVGEHDFRNFCKMDA NVH+Y R++ SF+IS C      +Q
Sbjct: 228  YFFWRENLNLSAMESAGKKFVGEHDFRNFCKMDAANVHNYKRHVTSFEISPCYISFEGNQ 287

Query: 1055 LWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLV 1234
            L A+ I+GSAFLWHQVRCMVAVLFMIG+GLES  VI+ LLDTN IPRKPQY MA E+PLV
Sbjct: 288  LCAIKIRGSAFLWHQVRCMVAVLFMIGQGLESIDVIESLLDTNGIPRKPQYNMAPEIPLV 347

Query: 1235 LQSCEFKDLNF 1267
            LQSC+F  L F
Sbjct: 348  LQSCDFDGLKF 358


>ref|XP_006606191.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
            [Glycine max]
          Length = 425

 Score =  387 bits (993), Expect = e-105
 Identities = 205/363 (56%), Positives = 253/363 (69%), Gaps = 5/363 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + +L+ R KELE ENA LL+Q+++C C ++EK L               + G    + N+
Sbjct: 11   IATLQARAKELEAENAKLLSQLADCRCHEMEKKLH-----------IPDEKGRESKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+ YFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSKRYVALKVTYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHE 721
              PTVESELF+A   TRLLV DK ESQYSRCGRTDKGVSSVGQVIAL LRS LK +  + 
Sbjct: 104  MEPTVESELFKAFEKTRLLVGDKKESQYSRCGRTDKGVSSVGQVIALFLRSNLKISATNN 163

Query: 722  -NCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTNL 898
             N          EIDYV VLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  NL
Sbjct: 164  GNSGVVLDEQHGEIDYVGVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKENL 223

Query: 899  DTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIKG 1078
            +  +++ AG K VGEHDFRNFCKMDA NVH+Y R I  F+ISS D R  ++QLW + I+G
Sbjct: 224  NIPAIEVAGNKLVGEHDFRNFCKMDAANVHNYRRCITLFEISSTDVRYNDNQLWVIKIRG 283

Query: 1079 SAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFKD 1258
            SAFLWHQVRCMVAVLFM+G+GLESP+VID LLDT++I RKPQY MA+E+PLVLQSCEF +
Sbjct: 284  SAFLWHQVRCMVAVLFMVGKGLESPNVIDMLLDTSRILRKPQYTMASEVPLVLQSCEFDN 343

Query: 1259 LNF 1267
            + F
Sbjct: 344  IKF 346


>ref|XP_006589470.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X2
            [Glycine max]
          Length = 425

 Score =  386 bits (991), Expect = e-104
 Identities = 206/364 (56%), Positives = 254/364 (69%), Gaps = 6/364 (1%)
 Frame = +2

Query: 194  LKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVELRSNK 373
            + SL+ RVKELE ENA LL+Q+++C   ++EK +               + G    + N+
Sbjct: 11   ITSLQARVKELETENAKLLSQLADCRSHEMEKKV-----------YVPDERGGKSKKGNR 59

Query: 374  NSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFSCEGE 544
             S+                E+++K  GY  + + ++ +RYVALK+MYFGKR  GF+ E +
Sbjct: 60   KSE----------------EKIEKMPGYNTRFMSHHSRRYVALKVMYFGKRFYGFASEAQ 103

Query: 545  -NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHE 721
              PTVESELF+A   TRLLV +K ESQYSRCGRTDKGVSSVGQVIAL LRS LK   E  
Sbjct: 104  MEPTVESELFKAFEKTRLLVGNKKESQYSRCGRTDKGVSSVGQVIALFLRSNLK-ISETN 162

Query: 722  NCKPTQAMYDK--EIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLFWSTN 895
            N      + ++  EIDYVRVLNR LPNDIR++GWCP P DFHARFSCLSREYKY FW  N
Sbjct: 163  NGNSGVVLDEQHGEIDYVRVLNRVLPNDIRIMGWCPAPVDFHARFSCLSREYKYFFWKEN 222

Query: 896  LDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWAMTIK 1075
            L+  +M+ AG K VGEHDFRNFCKMDA NVH+Y R I  F+IS  D R  ++QLW + I+
Sbjct: 223  LNIQAMESAGNKLVGEHDFRNFCKMDAANVHNYRRRIKLFEISPTDVRYNDNQLWVIKIR 282

Query: 1076 GSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQSCEFK 1255
            GSAFLWHQVRCMV VLFM+G+GLESP+VID LLDT +I RKPQY MA+E+PLVLQSCEF 
Sbjct: 283  GSAFLWHQVRCMVVVLFMVGKGLESPNVIDMLLDTARILRKPQYTMASEVPLVLQSCEFD 342

Query: 1256 DLNF 1267
            ++ F
Sbjct: 343  NIKF 346


>ref|XP_002302151.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
            gi|222843877|gb|EEE81424.1| tRNA pseudouridine synthase
            family protein [Populus trichocarpa]
          Length = 465

 Score =  380 bits (976), Expect = e-103
 Identities = 210/396 (53%), Positives = 262/396 (66%), Gaps = 29/396 (7%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            + I NL S++  L+ RV+ELE ENA   +++S+C C +L++                +  
Sbjct: 6    EEIINLRSQITFLQNRVQELEEENAKFSSRLSSCRCDELQEK---------------KPK 50

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKR 517
               E    +  ++  G K     ++ R++   K  GY  + ++++P+RYVALK+MYFG+R
Sbjct: 51   EKCENLGEERGEMNSGCK-----KSGRKKATPKTPGYDTRIMNHHPRRYVALKVMYFGQR 105

Query: 518  LNGFSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRS 694
              GFS E + +PTVESE+F+AL TTRLL+ D+ E QYSRCGRTDKGVS+VGQVIAL LRS
Sbjct: 106  FYGFSLEAQMDPTVESEIFKALETTRLLIGDRKEIQYSRCGRTDKGVSAVGQVIALYLRS 165

Query: 695  KLKHTGEH-----ENCKPTQAMYDKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCL 859
            KLK    H     E     Q     EIDYVRVLN  LP DIR++GWCPVPSDF ARFSCL
Sbjct: 166  KLKDIDAHNKHSGETVPEEQDGQPGEIDYVRVLNGVLPKDIRIVGWCPVPSDFSARFSCL 225

Query: 860  SREYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCD-- 1033
            SREYKY FW+ NL+ L M+ AG K +GEHDFRNFCKMDAV VH+Y RN++SF+IS CD  
Sbjct: 226  SREYKYFFWNDNLNLLVMETAGKKLIGEHDFRNFCKMDAVKVHNYRRNVMSFEISPCDMS 285

Query: 1034 ------------------ERSGESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSV 1159
                               R    QL+A+ IKGSAFLWHQVRCMVAVLFMIG+GLESP V
Sbjct: 286  HSSGMGSVKWMITKPSIRTRFEGHQLYAIKIKGSAFLWHQVRCMVAVLFMIGQGLESPEV 345

Query: 1160 IDELLDTNKIPRKPQYVMATELPLVLQSCEFKDLNF 1267
            ID LLDT  + RKPQY+MA E+PLVL SCEF+ L F
Sbjct: 346  IDALLDTRTL-RKPQYLMAPEIPLVLLSCEFEGLKF 380


>ref|XP_004237844.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Solanum
            lycopersicum]
          Length = 420

 Score =  378 bits (970), Expect = e-102
 Identities = 206/371 (55%), Positives = 255/371 (68%), Gaps = 4/371 (1%)
 Frame = +2

Query: 167  DAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKS 346
            D ++ L SEL++L+ R+K LE ENA L AQ+SNC CQ+ ++  +  V+            
Sbjct: 2    DLVATLQSELETLRSRMKVLESENAKLSAQLSNCSCQESKEKGNDSVL------------ 49

Query: 347  GDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKMMYFGKRLNG 526
                    KN  ++G  K  +K+R         GY   +H + +RYVALK+MYFG R  G
Sbjct: 50   --------KNGVLEGHGKKKNKLRDL-------GYGAMMH-HSKRYVALKVMYFGLRFYG 93

Query: 527  FSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLK 703
            F+ E + +PTVE ELF+AL  TRL+  DK E QYSRCGRTDKGVSSVGQVIAL LRS  +
Sbjct: 94   FASEAQMDPTVEGELFKALERTRLIFGDKKELQYSRCGRTDKGVSSVGQVIALFLRSNHR 153

Query: 704  HTGEHENCKPTQAMYDK---EIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYK 874
             +   +N  P +   ++   EIDYVRVLNR LPNDIR++GW P+P  F ARFSCLSR YK
Sbjct: 154  ES-RGDNKYPGENSIEESCGEIDYVRVLNRVLPNDIRIMGWSPIPVGFSARFSCLSRVYK 212

Query: 875  YLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQ 1054
            Y FW  NL+  +MQ A  KF+GEHDFRNFCKMDA NVH+Y R+IISF+I   +ER  + Q
Sbjct: 213  YFFWQGNLNLTAMQTAAKKFLGEHDFRNFCKMDADNVHNYRRHIISFEIVPFNERDNDDQ 272

Query: 1055 LWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLV 1234
            L  M IKGSAFLWHQVRCMVAVLF+IG+GLESP+VID LLD  + PRKPQ+ MA E+PLV
Sbjct: 273  LMIMKIKGSAFLWHQVRCMVAVLFLIGQGLESPNVIDLLLDIERTPRKPQFPMAPEIPLV 332

Query: 1235 LQSCEFKDLNF 1267
            LQSCEF+ L F
Sbjct: 333  LQSCEFEGLKF 343


>ref|XP_004984202.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like isoform X1
            [Setaria italica] gi|514819007|ref|XP_004984203.1|
            PREDICTED: tRNA pseudouridine(38/39) synthase-like
            isoform X2 [Setaria italica]
          Length = 468

 Score =  377 bits (969), Expect = e-102
 Identities = 204/397 (51%), Positives = 259/397 (65%), Gaps = 29/397 (7%)
 Frame = +2

Query: 164  GDAISNLHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRK 343
            G+  + L +E+ +L++RV+ELE EN  L    S+C C   E+++  + V          +
Sbjct: 6    GETAAALRAEVAALRMRVQELERENQRLAKVASSCTCGFKEENVGSVAVASSCLNGSDPE 65

Query: 344  --------------------------SGDVELRSNKNSDIQGGIKPIHKIRTRRQERVKK 445
                                      S + E++ N+N++   G+      RT+R      
Sbjct: 66   ARHNEKFHQSSALEKDLSPPFDHTVISTENEIQCNRNAE-GNGLPDDSSKRTKRTGH--- 121

Query: 446  GYMKSLHNYPQRYVALKMMYFGKRLNGFSCEGE-NPTVESELFEALVTTRLLVVDKSESQ 622
              +  L + P+R VALK+MYFG+R  GFS EG   PTVESE+F+AL   +L+V  + ES 
Sbjct: 122  -QVAILSHCPKRLVALKVMYFGQRFYGFSSEGNMEPTVESEIFKALERAKLMVASRKESC 180

Query: 623  YSRCGRTDKGVSSVGQVIALLLRSKLKHTGEHENCKPTQAMYDK--EIDYVRVLNRALPN 796
            YSRCGRTDKGVS+ GQVI+L LRS +K  GE         M D+  EIDYV+VLNR LP 
Sbjct: 181  YSRCGRTDKGVSASGQVISLYLRSNIKDVGED--------MLDERSEIDYVKVLNRILPR 232

Query: 797  DIRVIGWCPVPSDFHARFSCLSREYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDA 976
            DIRV+GWCPVP+DFHARF+CL REYKYLFW  +LD L MQKA +KF+GEHDFRNFCKMDA
Sbjct: 233  DIRVLGWCPVPADFHARFTCLGREYKYLFWRGDLDILEMQKAASKFIGEHDFRNFCKMDA 292

Query: 977  VNVHHYMRNIISFDISSCDERSGESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPS 1156
             NV +Y R I  F ISSCD+RS   +L +MTIKG+AFLWHQVRCMVAVLF+IG+GLESPS
Sbjct: 293  ANVSNYKRRITEFTISSCDKRSYNDELCSMTIKGTAFLWHQVRCMVAVLFLIGQGLESPS 352

Query: 1157 VIDELLDTNKIPRKPQYVMATELPLVLQSCEFKDLNF 1267
            V+D LLD  K PRKPQY MA ELPL+L+SC+F   +F
Sbjct: 353  VVDSLLDITKTPRKPQYKMAAELPLILRSCQFDKADF 389


>ref|XP_004290464.1| PREDICTED: tRNA pseudouridine(38/39) synthase-like [Fragaria vesca
            subsp. vesca]
          Length = 432

 Score =  377 bits (969), Expect = e-102
 Identities = 204/368 (55%), Positives = 255/368 (69%), Gaps = 6/368 (1%)
 Frame = +2

Query: 182  LHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRKSGDVEL 361
            + S + SL+ RV+ELE  NA L +Q++ C C + +   S +                   
Sbjct: 1    MDSLVDSLRHRVQELEALNAKLSSQLAVCRCHQDKNEDSSV------------------- 41

Query: 362  RSNKNSDIQGGIKPIHKIRTRRQERVKK--GY-MKSLHNYPQRYVALKMMYFGKRLNGFS 532
             S+ N+D + G       +T R++  +K  GY  + ++++ +RYVALK+MYFG+R  GF+
Sbjct: 42   -SSDNADEKSGKLSFQNKKTIREKVKEKFPGYDTRIMNHHSKRYVALKVMYFGRRFYGFA 100

Query: 533  CEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVIALLLRSKLKHT 709
             E + +PTVESE+F+AL  TRLL+ DK ES YSRCGRTDKGVS+VGQV  L L S +  +
Sbjct: 101  AEAQMDPTVESEIFKALEKTRLLIGDKKESHYSRCGRTDKGVSAVGQVTHLSLISYI--S 158

Query: 710  GEHENCKPTQAMY--DKEIDYVRVLNRALPNDIRVIGWCPVPSDFHARFSCLSREYKYLF 883
              H NC     ++  + EIDYVRVLNRALP+DIRV GWCPVP  F ARFSCLSREY YLF
Sbjct: 159  SPHSNCIIHSPLFPSEGEIDYVRVLNRALPDDIRVFGWCPVPLGFSARFSCLSREYYYLF 218

Query: 884  WSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSCDERSGESQLWA 1063
            W  NL+ L+M+ AG KFVGEHDFRNFCKMDA+NVH+Y R I SF IS CD R   +QLWA
Sbjct: 219  WGGNLNFLAMETAGRKFVGEHDFRNFCKMDALNVHNYRRKITSFAISPCDVRFEGNQLWA 278

Query: 1064 MTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYVMATELPLVLQS 1243
              IKGSAFLWHQVRCMVA+L +IG+G ESP V+D LLDT+KIPRKPQY MA E+PLVLQ 
Sbjct: 279  FKIKGSAFLWHQVRCMVAILLLIGQGHESPDVVDALLDTDKIPRKPQYGMAPEIPLVLQF 338

Query: 1244 CEFKDLNF 1267
            CEF+ L F
Sbjct: 339  CEFEGLKF 346


>gb|ACF87175.1| unknown [Zea mays] gi|195612012|gb|ACG27836.1| hypothetical protein
            [Zea mays] gi|414867030|tpg|DAA45587.1| TPA:
            pseudouridylate synthase isoform 1 [Zea mays]
            gi|414867031|tpg|DAA45588.1| TPA: pseudouridylate
            synthase isoform 2 [Zea mays]
            gi|414867032|tpg|DAA45589.1| TPA: pseudouridylate
            synthase isoform 3 [Zea mays]
            gi|414867033|tpg|DAA45590.1| TPA: pseudouridylate
            synthase isoform 4 [Zea mays]
          Length = 457

 Score =  377 bits (969), Expect = e-102
 Identities = 208/379 (54%), Positives = 250/379 (65%), Gaps = 17/379 (4%)
 Frame = +2

Query: 182  LHSELKSLKLRVKELEMENASLLAQISNCHCQKLEKSLSQIVVXXXXXXXXXRK------ 343
            L  E+ +L++RV+ELE EN  L    S C C   E S+  I                   
Sbjct: 12   LRGEVAALRMRVQELEAENQRLARIASTCTCGFKEGSVGSITAHHNVKFHQNSTMEKDLS 71

Query: 344  --------SGDVELRSNKNSDIQGGIKPIHKIRTRRQERVKKGYMKSLHNYPQRYVALKM 499
                    S   E++ N+N+D   G+       T+R  R K G    L + P+R VALK+
Sbjct: 72   SPFDHTVISNANEMQCNRNAD-DNGLPEDSSKHTKRTGR-KVGI---LSHCPKRLVALKV 126

Query: 500  MYFGKRLNGFSCEGE-NPTVESELFEALVTTRLLVVDKSESQYSRCGRTDKGVSSVGQVI 676
            MYFG+R  GFS EG   PTVESE+F+AL   +L+V ++ ES YSRCGRTDKGVS+ GQVI
Sbjct: 127  MYFGQRFYGFSSEGNIEPTVESEIFKALERAKLMVANRKESCYSRCGRTDKGVSATGQVI 186

Query: 677  ALLLRSKLKHTGEHENCKPTQAMYDK--EIDYVRVLNRALPNDIRVIGWCPVPSDFHARF 850
            +L LRS +K  G          M D+  EIDYV+VLNR LP DIRV+GWCPVP+DFHARF
Sbjct: 187  SLYLRSNIKDVGGD--------MLDERSEIDYVKVLNRILPRDIRVLGWCPVPADFHARF 238

Query: 851  SCLSREYKYLFWSTNLDTLSMQKAGTKFVGEHDFRNFCKMDAVNVHHYMRNIISFDISSC 1030
            +CLSREYKYLFW  +LD L MQKA +KF+GEHDFRNFCKMDA NV +Y R+I  F IS+C
Sbjct: 239  TCLSREYKYLFWKGDLDILEMQKAASKFIGEHDFRNFCKMDAANVSNYRRHITEFTISAC 298

Query: 1031 DERSGESQLWAMTIKGSAFLWHQVRCMVAVLFMIGEGLESPSVIDELLDTNKIPRKPQYV 1210
            D RS   +L +MTIKGSAFLWHQVRCMVAVLF+IG+GLESPSV+D LLD  K  RKPQY 
Sbjct: 299  DRRSNNDELCSMTIKGSAFLWHQVRCMVAVLFLIGQGLESPSVVDSLLDIMKTSRKPQYK 358

Query: 1211 MATELPLVLQSCEFKDLNF 1267
            MA ELPL+LQSC F   NF
Sbjct: 359  MAPELPLILQSCLFDKANF 377