BLASTX nr result
ID: Papaver27_contig00001685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00001685
(594 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit T... 120 4e-25
ref|XP_002266482.1| PREDICTED: general transcription factor IIH ... 120 4e-25
ref|XP_007210944.1| hypothetical protein PRUPE_ppa024121mg [Prun... 117 2e-24
ref|XP_004298704.1| PREDICTED: general transcription factor IIH ... 115 9e-24
ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Popu... 114 3e-23
ref|XP_004147953.1| PREDICTED: general transcription factor IIH ... 113 3e-23
ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutr... 113 5e-23
ref|XP_006477302.1| PREDICTED: general transcription factor IIH ... 112 6e-23
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab... 110 3e-22
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana] 110 4e-22
ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA... 110 4e-22
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g... 109 5e-22
ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like ... 107 3e-21
ref|XP_002313692.1| hypothetical protein POPTR_0009s14080g [Popu... 107 3e-21
gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indi... 107 3e-21
gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays] 106 4e-21
gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays] 106 4e-21
ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780... 105 1e-20
ref|XP_006584882.1| PREDICTED: general transcription factor IIH ... 104 2e-20
ref|XP_003525223.2| PREDICTED: general transcription factor IIH ... 104 2e-20
>ref|XP_007040007.1| Nucleotide excision repair, TFIIH, subunit TTDA isoform 1
[Theobroma cacao] gi|590677408|ref|XP_007040008.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777252|gb|EOY24508.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao] gi|508777253|gb|EOY24509.1|
Nucleotide excision repair, TFIIH, subunit TTDA isoform
1 [Theobroma cacao]
Length = 70
Score = 120 bits (300), Expect = 4e-25
Identities = 56/69 (81%), Positives = 65/69 (94%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPMAQFIVN+N+++PA+QK IIHVLDNTH FVQPHAAEMIRSAISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIVNLNASMPASQKFIIHVLDNTHFFVQPHAAEMIRSAISEF 60
Query: 250 RDKISYEKP 224
RD+ SY+KP
Sbjct: 61 RDQNSYDKP 69
>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
product [Vitis vinifera]
Length = 70
Score = 120 bits (300), Expect = 4e-25
Identities = 56/70 (80%), Positives = 66/70 (94%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPMAQFI+NMN+++PA+QK IIHVLD+THLFVQPH AEMIRSAISEF
Sbjct: 1 MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60
Query: 250 RDKISYEKPA 221
R++ SYEKPA
Sbjct: 61 REQNSYEKPA 70
>ref|XP_007210944.1| hypothetical protein PRUPE_ppa024121mg [Prunus persica]
gi|595860542|ref|XP_007211160.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
gi|462406679|gb|EMJ12143.1| hypothetical protein
PRUPE_ppa024121mg [Prunus persica]
gi|462406895|gb|EMJ12359.1| hypothetical protein
PRUPE_ppb011951mg [Prunus persica]
Length = 70
Score = 117 bits (294), Expect = 2e-24
Identities = 55/69 (79%), Positives = 64/69 (92%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG F++CDIPMAQFI+N N+TLP +Q+ IIHVLD+THLFVQPHAAEMIRSAISEF
Sbjct: 1 MVNATKGLFVSCDIPMAQFIINYNNTLPPSQQFIIHVLDSTHLFVQPHAAEMIRSAISEF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_004298704.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
1 [Fragaria vesca subsp. vesca]
gi|470125430|ref|XP_004298705.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 70
Score = 115 bits (288), Expect = 9e-24
Identities = 54/69 (78%), Positives = 63/69 (91%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+T+G FI+CDIPMAQFI+N N++LP +QK IIHVLD THLFVQPHAAEMI+SAISEF
Sbjct: 1 MVNATRGLFISCDIPMAQFIINYNNSLPQSQKFIIHVLDGTHLFVQPHAAEMIKSAISEF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006368720.1| hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
gi|566147875|ref|XP_006368721.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|566147877|ref|XP_006368722.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346807|gb|ERP65289.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346808|gb|ERP65290.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
gi|550346809|gb|ERP65291.1| hypothetical protein
POPTR_0001s08090g [Populus trichocarpa]
Length = 70
Score = 114 bits (284), Expect = 3e-23
Identities = 50/70 (71%), Positives = 66/70 (94%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPMAQFI+N+N++LPA+QK IIH+LD+TH+FVQPH ++MIRSAIS+F
Sbjct: 1 MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60
Query: 250 RDKISYEKPA 221
R++ SYEKP+
Sbjct: 61 REQNSYEKPS 70
>ref|XP_004147953.1| PREDICTED: general transcription factor IIH subunit 5-like [Cucumis
sativus] gi|449494289|ref|XP_004159503.1| PREDICTED:
general transcription factor IIH subunit 5-like [Cucumis
sativus]
Length = 70
Score = 113 bits (283), Expect = 3e-23
Identities = 50/69 (72%), Positives = 63/69 (91%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CDIPMAQFI+N N++LPA+ + IIH+LDNTH+FVQPH A+MIR+AISEF
Sbjct: 1 MVNAIKGMFISCDIPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF 60
Query: 250 RDKISYEKP 224
R++ISYEKP
Sbjct: 61 REQISYEKP 69
>ref|XP_006417239.1| hypothetical protein EUTSA_v10009271mg [Eutrema salsugineum]
gi|557095010|gb|ESQ35592.1| hypothetical protein
EUTSA_v10009271mg [Eutrema salsugineum]
Length = 70
Score = 113 bits (282), Expect = 5e-23
Identities = 53/69 (76%), Positives = 61/69 (88%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CDIPMAQFIVNMNS++P++QK IIHVLD THLFVQPH +MIRS ISEF
Sbjct: 1 MVNAIKGVFISCDIPMAQFIVNMNSSMPSSQKFIIHVLDGTHLFVQPHVEQMIRSTISEF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006477302.1| PREDICTED: general transcription factor IIH subunit 5-like isoform
X1 [Citrus sinensis] gi|568846947|ref|XP_006477303.1|
PREDICTED: general transcription factor IIH subunit
5-like isoform X2 [Citrus sinensis]
gi|568846949|ref|XP_006477304.1| PREDICTED: general
transcription factor IIH subunit 5-like isoform X3
[Citrus sinensis]
Length = 70
Score = 112 bits (281), Expect = 6e-23
Identities = 52/70 (74%), Positives = 64/70 (91%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CDIPMAQFI+NMN+++P +QK IIH+LD+THLFVQP+ AEMIRSAI+EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINMNASMPQSQKFIIHILDSTHLFVQPNMAEMIRSAIAEF 60
Query: 250 RDKISYEKPA 221
RD+ SYEKPA
Sbjct: 61 RDQNSYEKPA 70
>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
Length = 71
Score = 110 bits (275), Expect = 3e-22
Identities = 51/69 (73%), Positives = 61/69 (88%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CDIPM QFIVNMN+++P +QK IIHVLD+THLFVQPH +MIRSAIS+F
Sbjct: 1 MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
Length = 113
Score = 110 bits (274), Expect = 4e-22
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG F++CDIPM QFIVNMN+++P +QK IIHVLD+THLFVQPH +MIRSAIS+F
Sbjct: 43 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 102
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 103 RDQNSYEKP 111
>ref|NP_172702.1| nucleotide excision repair, TFIIH, subunit TTDA [Arabidopsis
thaliana] gi|38566546|gb|AAR24163.1| At1g12400
[Arabidopsis thaliana] gi|40823747|gb|AAR92302.1|
At1g12400 [Arabidopsis thaliana]
gi|332190754|gb|AEE28875.1| nucleotide excision repair,
TFIIH, subunit TTDA [Arabidopsis thaliana]
Length = 71
Score = 110 bits (274), Expect = 4e-22
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG F++CDIPM QFIVNMN+++P +QK IIHVLD+THLFVQPH +MIRSAIS+F
Sbjct: 1 MVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
gi|34393555|dbj|BAC83153.1| unknown protein [Oryza
sativa Japonica Group] gi|113611604|dbj|BAF21982.1|
Os07g0573600 [Oryza sativa Japonica Group]
gi|215707252|dbj|BAG93712.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218199880|gb|EEC82307.1| hypothetical protein
OsI_26568 [Oryza sativa Indica Group]
gi|222637319|gb|EEE67451.1| hypothetical protein
OsJ_24828 [Oryza sativa Japonica Group]
Length = 131
Score = 109 bits (273), Expect = 5e-22
Identities = 50/72 (69%), Positives = 62/72 (86%)
Frame = -3
Query: 439 AGKMVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAI 260
A MVN+ KG FI+CD+PMAQFIVN+N+++PA+ K I+H+LD TH+FVQPH AEMIRS I
Sbjct: 59 AENMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSKI 118
Query: 259 SEFRDKISYEKP 224
SEFRD+ SYEKP
Sbjct: 119 SEFRDQNSYEKP 130
>ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
distachyon]
Length = 457
Score = 107 bits (267), Expect = 3e-21
Identities = 47/69 (68%), Positives = 61/69 (88%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CD+PMAQFIVN+N+++PA++K I+H+LD TH+FVQPH EMIRS I+EF
Sbjct: 1 MVNAIKGLFISCDVPMAQFIVNLNASMPASEKFIVHMLDPTHMFVQPHVGEMIRSKIAEF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_002313692.1| hypothetical protein POPTR_0009s14080g [Populus trichocarpa]
gi|222850100|gb|EEE87647.1| hypothetical protein
POPTR_0009s14080g [Populus trichocarpa]
Length = 70
Score = 107 bits (267), Expect = 3e-21
Identities = 46/69 (66%), Positives = 62/69 (89%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPM QFI+N+N++LPA QK +IH+LD++H+FVQPH +EMIRSA ++F
Sbjct: 1 MVNATKGLFISCDIPMVQFIINLNASLPALQKFVIHILDSSHMFVQPHVSEMIRSATADF 60
Query: 250 RDKISYEKP 224
R++ SYEKP
Sbjct: 61 REQNSYEKP 69
>gb|EEC78671.1| hypothetical protein OsI_18797 [Oryza sativa Indica Group]
gi|222630525|gb|EEE62657.1| hypothetical protein
OsJ_17460 [Oryza sativa Japonica Group]
Length = 81
Score = 107 bits (267), Expect = 3e-21
Identities = 48/69 (69%), Positives = 60/69 (86%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CD+PMAQFIVN+N+++PA+ K I+H+LD TH+FVQPH AEMIR ISEF
Sbjct: 12 MVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRGKISEF 71
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 72 RDQNSYEKP 80
>gb|AFW75001.1| REX1 DNA Repair family protein [Zea mays]
Length = 154
Score = 106 bits (265), Expect = 4e-21
Identities = 47/73 (64%), Positives = 62/73 (84%)
Frame = -3
Query: 442 SAGKMVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSA 263
S GKMVN+ KG FI+CD+PMAQFIVN+N+++P +++ I+H+LD T++FVQPH A MIRS
Sbjct: 81 STGKMVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSK 140
Query: 262 ISEFRDKISYEKP 224
I EFRD+ SYEKP
Sbjct: 141 IGEFRDQNSYEKP 153
>gb|AFW74999.1| REX1 DNA Repair family protein, partial [Zea mays]
Length = 132
Score = 106 bits (265), Expect = 4e-21
Identities = 47/73 (64%), Positives = 62/73 (84%)
Frame = -3
Query: 442 SAGKMVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSA 263
S GKMVN+ KG FI+CD+PMAQFIVN+N+++P +++ I+H+LD T++FVQPH A MIRS
Sbjct: 59 STGKMVNAIKGLFISCDVPMAQFIVNLNASMPPSERFIVHMLDPTNMFVQPHVAHMIRSK 118
Query: 262 ISEFRDKISYEKP 224
I EFRD+ SYEKP
Sbjct: 119 IGEFRDQNSYEKP 131
>ref|XP_004960540.1| PREDICTED: uncharacterized protein LOC101780092 [Setaria italica]
Length = 70
Score = 105 bits (262), Expect = 1e-20
Identities = 46/69 (66%), Positives = 60/69 (86%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+ KG FI+CDIPMAQFI+N+N+++P +++ I+H+LD TH+FVQPH AEMIRS I EF
Sbjct: 1 MVNAIKGLFISCDIPMAQFIINLNASMPPSERFIVHMLDPTHMFVQPHVAEMIRSKIGEF 60
Query: 250 RDKISYEKP 224
RD+ SYEKP
Sbjct: 61 RDQNSYEKP 69
>ref|XP_006584882.1| PREDICTED: general transcription factor IIH subunit 5-like [Glycine
max]
Length = 70
Score = 104 bits (260), Expect = 2e-20
Identities = 46/69 (66%), Positives = 60/69 (86%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPMAQ+I+NMN++LPA+ K IIH+LDNTH+FVQPH +MIRS I++F
Sbjct: 1 MVNATKGVFISCDIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSRIAKF 60
Query: 250 RDKISYEKP 224
R+ +Y KP
Sbjct: 61 REDNTYVKP 69
>ref|XP_003525223.2| PREDICTED: general transcription factor IIH subunit 5-like [Glycine
max]
Length = 115
Score = 104 bits (260), Expect = 2e-20
Identities = 46/69 (66%), Positives = 60/69 (86%)
Frame = -3
Query: 430 MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF 251
MVN+TKG FI+CDIPMAQ+I+NMN++LPA+ K IIH+LDNTH+FVQPH +MIRS I++F
Sbjct: 46 MVNATKGVFISCDIPMAQYIINMNASLPASDKFIIHILDNTHMFVQPHVEQMIRSQIAKF 105
Query: 250 RDKISYEKP 224
R+ +Y KP
Sbjct: 106 REDNTYVKP 114