BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00001243
         (1514 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    77   9e-26
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    72   1e-21
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part...    69   1e-17
gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]               97   2e-17
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    77   8e-17
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    57   6e-16
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    69   8e-16
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    59   5e-15
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    59   3e-14
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    65   3e-13
ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein A...    83   3e-13
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    59   4e-12
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    77   2e-11
ref|XP_006849381.1| hypothetical protein AMTR_s00158p00089990 [A...    76   3e-11
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A...    73   4e-10
ref|XP_007008704.1| Uncharacterized protein TCM_042330 [Theobrom...    72   9e-10
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    71   1e-09
ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobrom...    71   1e-09
ref|XP_007017129.1| Uncharacterized protein TCM_042328 [Theobrom...    71   1e-09
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A...    71   1e-09

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score = 77.4 bits (189), Expect(2) = 9e-26
 Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 5/164 (3%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            MHNT+ DL IL  F  C R  R+ + +   W PP  G + +  DGA +    + G G + 
Sbjct: 678  MHNTIHDLCILKSFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVF 737

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLE--WTRKWNIGRILIRSDSSSVIKALQS 1274
            R      +GA +  + I ++  A+   +I  +E  W R W    + +  D S+V+  ++S
Sbjct: 738  RYYKGQFVGAFASHIDIPSSIAAKVMVVITAIELAWVRDWK--HVWLEVDFSTVLDYIRS 795

Query: 1275 GD-IPWFAMQHWLEVRDMYDSVRF--MHTFSEANFSADILAKRG 1397
               +PW     WL       ++ F   H F E N  AD LA  G
Sbjct: 796  PSLVPWQLRVRWLNCLYRISTMTFKSSHIFREGNRVADALANHG 839



 Score = 68.2 bits (165), Expect(2) = 9e-26
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
 Frame = +1

Query: 490 LWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSLATKRYVCQNAEESLDHILWHCNFA 669
           LW + I P ++   WK +RG   +   ++ R   +L ++   C N+ ESLDHI  HC+FA
Sbjct: 531 LWSKFILPRMSLHAWKVMRGTVISYHLLQRR-GVALVSRCEFCGNSTESLDHIFLHCSFA 589

Query: 670 VGAWSWISGIF--NLTPN-VNLTFSYKEAKGSSRIIKELWLIANLVIRSELWFTRNKKVY 840
              W+    IF   L PN +   FS   A   S  +KELWLI    I   +W  RN+  +
Sbjct: 590 ASVWNHFIYIFEIGLVPNTIAEVFSLGLAMDRSPQLKELWLICFTSILWYIWHARNQIRF 649

Query: 841 EKK 849
           + +
Sbjct: 650 DSR 652


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 71.6 bits (174), Expect(2) = 1e-21
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
 Frame = +1

Query: 418 GKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSL 597
           G+ S   A + +R +   L+   L+W + I P ++  +WK LRG   + D ++ R   +L
Sbjct: 13  GELSAKEAFQFLRPRLPSLDWGKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRR-GIAL 71

Query: 598 ATKRYVCQNAEESLDHILWHCNFAVGAWSWISGIFNL--TPNVNLTFSYKEAKGSSRIIK 771
           A++  +C    ESL HI   C+FA   W+  +G+F L   P   +   Y    G S  +K
Sbjct: 72  ASRCVLCGRDGESLPHIFLTCSFAASLWNNRAGLFELGCLPQNLVDLLYYGGVGRSHQLK 131

Query: 772 ELWLIANLVIRSELWFTRNK 831
           E+WLI        +W  RNK
Sbjct: 132 EIWLICYTTTLWFIWKARNK 151



 Score = 60.5 bits (145), Expect(2) = 1e-21
 Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 5/165 (3%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            M N++ +LR+L  F +  R  R  +     W PP  G + +  DGA +     +G G I 
Sbjct: 183  MSNSLTELRVLKKFGLLCRPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIF 242

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLE--WTRKWNIGRILIRSDSSSVIKALQS 1274
            R+     LGA +  L I  +  AE   +I  +E  W R W    I +  DS  V+  LQ 
Sbjct: 243  RDFHGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWE--HIWLEVDSIIVLNFLQD 300

Query: 1275 GD-IPWFAMQHWLEVRDMYDSVRF--MHTFSEANFSADILAKRGL 1400
               +PW     W         + F   H F E N  AD LA  GL
Sbjct: 301  PHLVPWRLRVGWGNFLHRISQMNFRSSHIFREGNQVADALANMGL 345


>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
            gi|462409318|gb|EMJ14652.1| hypothetical protein
            PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 68.6 bits (166), Expect(2) = 1e-17
 Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 5/167 (2%)
 Frame = +3

Query: 912  RSFMHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAG 1091
            R  + N V DL I+    V +R     + +   W PP  G + ++ DGA + +   AG+G
Sbjct: 273  RGHILNKVHDLCIIRSIGVHYRPRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSG 332

Query: 1092 VIARNVDCDVLGATSVGLGITTNFLAEFYGIIVGLE--WTRKWNIGRILIRSDSSSVIKA 1265
             + RN    VLGA S  L + +   AE   +I  +E  W   W+   I I +DS  V K 
Sbjct: 333  GVFRNYQGHVLGAFSANLDVPSGVHAEVLAVIKAIELAWLHAWH--NIWIETDSLLVTKF 390

Query: 1266 LQSGD-IPWFAMQHWLE--VRDMYDSVRFMHTFSEANFSADILAKRG 1397
             +S   +PW     W    +R  + S +  H F E N   D LA  G
Sbjct: 391  FRSPHLVPWRLRVDWQNCLLRLQHMSFKISHIFREGNHDVDALANHG 437



 Score = 49.7 bits (117), Expect(2) = 1e-17
 Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 4/148 (2%)
 Frame = +1

Query: 418 GKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSL 597
           G FS   A E  R K+  +    L+W+  I P  +   WK + G   T D ++ R     
Sbjct: 115 GGFSAKDAYEFTRPKFAKVPWCKLIWKPFIEPWKSFLAWKVMHGRLLTEDFLQKR----- 169

Query: 598 ATKRYVCQNAEESLDHILWHCNFAVGAWSWISGIFNL----TPNVNLTFSYKEAKGSSRI 765
                    A E+++H+   C F    WS +  +F L     P   +  S   A  S ++
Sbjct: 170 ------AWMAPENINHLFSECPFTCSIWSSMFIVFGLHFTSGPLAVILSSGLSAHFSPQL 223

Query: 766 IKELWLIANLVIRSELWFTRNKKVYEKK 849
           + +LWL+    I   +W  RNK  +E+K
Sbjct: 224 M-DLWLLMFRTIVWLIWDLRNKLRFEEK 250


>gb|AGV40503.1| hypothetical protein [Phaseolus vulgaris]
          Length = 234

 Score = 97.1 bits (240), Expect = 2e-17
 Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
 Frame = +3

Query: 912  RSFMHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAG 1091
            ++ M N + D  ++ FF +  R  +V++P+   W  P PG + +  DGA+RG P +A  G
Sbjct: 36   KASMKNDMLDFNVIKFFGIKTRSGKVLRPLPIRWEFPSPGWVKINTDGAARGYPGLATCG 95

Query: 1092 VIARNVDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQ 1271
             I R    + +GA S  L + T  +AEFYG+I  +E  +K  +  + +  DS+ V  A  
Sbjct: 96   GIFRGSMGEFIGAFSAFLEVQTALVAEFYGVIHAMEEAQKMGLTNVWLECDSALVCAAFT 155

Query: 1272 S-GDIPWFAMQHWLEVRDMYDSVRF--MHTFSEANFSADILAKRGLFATR*RRNFNYGGR 1442
            +  ++PW     W    +   ++RF   H F E N  AD LA  G      R +F++  R
Sbjct: 156  ARTNVPWMLQNRWNTCLNFCGTIRFRVTHIFREGNACADKLANLGFIH---RESFHWYNR 212

Query: 1443 LD-------FINSIELP 1472
            L        F+NS  LP
Sbjct: 213  LPAILFLEFFMNSYNLP 229


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score = 77.4 bits (189), Expect(2) = 8e-17
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
 Frame = +3

Query: 924  HNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIAR 1103
            ++ ++D ++   F +  +  RV   +   W PP    + + CDG+S G       G++ R
Sbjct: 187  NSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIR 246

Query: 1104 NVDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQSG-D 1280
            + +   LGA S  +G  T   AEF   ++ +E  ++  +  + + +DS  V+ A   G  
Sbjct: 247  DSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLG 306

Query: 1281 IPWFAMQHWLEVRDMYDSV--RFMHTFSEANFSADILAKRG 1397
            +PW     W    D  DS+    +H   E N  AD LAK G
Sbjct: 307  VPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHG 347



 Score = 38.1 bits (87), Expect(2) = 8e-17
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
 Frame = +1

Query: 490 LWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSLATKRYVCQNAEESLDHILWHCNFA 669
           LW   I PS +   W+ L     T + +R R    ++   + C  + ES  HI + C+  
Sbjct: 40  LWNSYIPPSRSFITWRLLHNKLPTDENLRKRGCLIVSICCF-CMKSAESSQHIFFECHVT 98

Query: 670 VGAWSWISGIFN--LTPNVNLTFSYKEAKGSSRIIKELWLIANLVIRSELWFTRNKKVYE 843
              W W+    +  L  +  L    +     S+++  +   A +     +W  RN++ + 
Sbjct: 99  SRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIERNQRCFH 158

Query: 844 KK 849
            K
Sbjct: 159 NK 160


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 57.4 bits (137), Expect(2) = 6e-16
 Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
 Frame = +1

Query: 418 GKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSL 597
           G+     A + +R +   L+   L+W + I P ++  +WK LRG   + D ++ R    L
Sbjct: 44  GELLAKEAFQFMRPRLPSLDWSKLIWSKFIIPRISLHSWKVLRGRVLSEDLLQRR-GIVL 102

Query: 598 ATKRYVC-QNAEESLDHILWHCNFAVGAWSWISGIFNL--TPNVNLTFSYKEAKGSSRII 768
           A++  +C ++ E S  HI   C+F    W+  + +F L   P   +   Y    G S  +
Sbjct: 103 ASRCVLCGRDCESSFPHIFLTCSFVASLWNNWACLFELGSLPQNLVDLIYYGGVGRSHQL 162

Query: 769 KELWLIANLVIRSELWF---TRNK 831
           KE+WLI      + LWF    RNK
Sbjct: 163 KEIWLIC---YTTTLWFIGKARNK 183



 Score = 55.1 bits (131), Expect(2) = 6e-16
 Identities = 50/166 (30%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            M N++  LR+L  F +     + ++     W PP  G + +  DGA +     +G G I 
Sbjct: 215  MSNSLTKLRVLKKFGLLCHPCQALRITKVNWHPPLFGWIKVNTDGAWQKTTGKSGYGGIF 274

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLE--WTRKWNIGRILIRSDSSSVIKALQS 1274
            R+     LGA +  L I  +  AE   +I  +E  W R W    IL+  DS+ V+  L  
Sbjct: 275  RDFHGSFLGAFASNLEIPNSVDAEVMAVIQAIELAWVRDWK--HILLEVDSAIVLNFLHD 332

Query: 1275 GD-IPW---FAMQHWLEVRDMYDSVRFMHTFSEANFSADILAKRGL 1400
               +PW    A  + L  R    + R  H F E N  AD L   GL
Sbjct: 333  PHLVPWRLRVACGNCLH-RISQMNFRSSHIFREGNQVADTLVNMGL 377


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 68.6 bits (166), Expect(2) = 8e-16
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 3/160 (1%)
 Frame = +3

Query: 927  NTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARN 1106
            ++++D ++   F +  +  RV       W PP  G + + CDG+  G+P     GVI R 
Sbjct: 217  SSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRA 276

Query: 1107 VDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQ-SGDI 1283
                  GA +  +G  T   AE+   +  +E  ++ ++  I I +DS +VI+A   +  +
Sbjct: 277  SQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNTGV 336

Query: 1284 PWFAMQHWLEVRDMYDSVRFM--HTFSEANFSADILAKRG 1397
            PW     W        S+R +  H   E N  AD LAK G
Sbjct: 337  PWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAKNG 376



 Score = 43.5 bits (101), Expect(2) = 8e-16
 Identities = 27/119 (22%), Positives = 46/119 (38%)
 Frame = +1

Query: 487 LLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYSLATKRYVCQNAEESLDHILWHCNF 666
           +LW     P+ A   W+FL     T D +R R  Y ++     C+   E+  HI   C  
Sbjct: 74  MLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPV 133

Query: 667 AVGAWSWISGIFNLTPNVNLTFSYKEAKGSSRIIKELWLIANLVIRSELWFTRNKKVYE 843
            +  W W      L    +    +      SR+++ +   A + I   +W   N K ++
Sbjct: 134 TLQLWDW------LLKATDQHLDFSSILNISRMVQHVMNSAIVHIMWSIWLECNNKYFD 186


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 58.9 bits (141), Expect(3) = 5e-15
 Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
 Frame = +3

Query: 945  RILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVL 1124
            ++++    C ++ +++      W+ P  G   L  DG++  N    G G I R+    ++
Sbjct: 1065 KLINIVEHCKQQYKIV---LVSWNKPGLGTYKLNTDGSALQNSGKIGGGGILRDHQGKIV 1121

Query: 1125 GATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQS-GDIPWF--- 1292
             A S+  G  TN +AE    + GLEW  +    R+ +  DS  +   +++  +IPW    
Sbjct: 1122 YAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWIKNKTNIPWIYED 1181

Query: 1293 AMQHWLEVRDMYDSVRFMHTFSEANFSADILAK 1391
             +Q   ++    +  +  H + EAN +AD+L+K
Sbjct: 1182 LIQQIKQITRKIEQFQCHHIYREANITADLLSK 1214



 Score = 47.0 bits (110), Expect(3) = 5e-15
 Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
 Frame = +1

Query: 409  TFKGKFSVCSARELIRTKYYPLEGVN-LLWQQPIHPSLAAQNWKFLRGACATMDKVRSRF 585
            T  G F++ SA E IR K  P++ +N ++W + +   +A   W+ L+G   T +++  RF
Sbjct: 882  TETGNFTIASAWECIRNKR-PIDTINTIIWHKHLPFKIAFFIWRALKGKLPT-NELLQRF 939

Query: 586  RYSLATKRYVCQN-AEESLDHILWHCNFAVGAWSWISGIFNLTP-NVNL---TFSYKEAK 750
              S  +K Y C +  ++ ++HIL + NFA   W   + I  + P N  L      ++  +
Sbjct: 940  G-SAISKCYCCYSKGKDDINHILINGNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQ 998

Query: 751  GSSRIIKELWLIANLVIRSELWFTRNKKVYEKKA 852
             ++ + K L  I   VI   LW  R    Y  K+
Sbjct: 999  VNNEVHKLLIHILPNVICWNLWKNRCAVKYGNKS 1032



 Score = 23.1 bits (48), Expect(3) = 5e-15
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 192 TSLYYDIWFGSISIAEALDRNDLDRAARVGDIIVAGEWN 308
           +S ++D W  + ++A   D         V D I  G+WN
Sbjct: 808 SSFWWDNWLDNENLASQSDHISSLNNGVVTDFIKDGKWN 846


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 59.3 bits (142), Expect(2) = 3e-14
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
 Frame = +3

Query: 1011 WSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGITTNFLAEFYGIIV 1190
            W  P  G +    DGAS+GNP ++  G   R+ + D+L A +  +G TTN  AE   +  
Sbjct: 671  WRKPSEGWVTCNTDGASKGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWK 730

Query: 1191 GLEWTRKWNIGRILIRSDSSSVIKAL-QSGDIPWFAMQHWLEVRDMYD--SVRFMHTFSE 1361
             L++  +  + ++ + +DS ++   + +S  IPW  ++   E+ ++     V+  H + E
Sbjct: 731  ALQFCYENGLRKVRLETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYRE 790

Query: 1362 ANFSADILA 1388
             N  AD +A
Sbjct: 791  VNQLADFIA 799



 Score = 47.4 bits (111), Expect(2) = 3e-14
 Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
 Frame = +1

Query: 403 CQTFKGKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSR 582
           C    G F+V SA   IR +    E    +W + +   ++   W+  R   AT D ++ R
Sbjct: 467 CGNLTGLFTVKSAYHRIRGRKEEEEWRRYMWIKGMPIKISFFLWRVWRRKIATYDNLK-R 525

Query: 583 FRYSLATKRYVCQNAE-ESLDHILWHCNFAVGAW----SWISGIFNLTPNVNLTFSYKEA 747
            +  + +K Y C+  E E++ H+L     A   W    S+   I N      L F + + 
Sbjct: 526 MKIPVVSKCYCCKEGEMETMTHLLLTAPIAQKLWKQFASYAGIIINGLNLQQLIFKWWDY 585

Query: 748 KGSSRIIKELWLIANLVIRSELWFTRNKKVYEKKAP-NGLFFQQRVFNFMSIHV 906
           K S+++ + L  +   VI  ELW  RN   + K+   N +++Q ++  +  + +
Sbjct: 586 KASNKLSQILKAVL-AVIMWELWKRRNSYRHGKETTYNNMYYQCQLILYQLVTI 638


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 389

 Score = 64.7 bits (156), Expect(2) = 3e-13
 Identities = 40/153 (26%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
 Frame = +3

Query: 945  RILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVL 1124
            R+ +    C + L+V       W  P  G   L  DG+++ N    G G I R+    ++
Sbjct: 193  RLFNLVEQCQQHLKVTM---VNWERPPEGIHKLNTDGSAKHNTGKIGGGGILRDHQGKLI 249

Query: 1125 GATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIK-ALQSGDIPWFAMQ 1301
             A ++ LG  TN  AE    + GL+W ++    +I++  DS  + K  +    +PW  + 
Sbjct: 250  YAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWIINKSSVPWRCLH 309

Query: 1302 HWLEVRDMYDSVRFM---HTFSEANFSADILAK 1391
            +  +++++ + +      H + EAN +AD+LAK
Sbjct: 310  YIQQIQNISNKMEVFQCKHIYREANGTADLLAK 342



 Score = 38.9 bits (89), Expect(2) = 3e-13
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 5/156 (3%)
 Frame = +1

Query: 415 KGKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFRYS 594
           KG+F++ SA ++IR K  P    N +W + +    +   W+ LR    T + +    +  
Sbjct: 12  KGQFTIFSAWDIIRKKKDPDPIHNCVWHKNVPFKTSFFIWRALRSKLPTNENLLKFGKEE 71

Query: 595 LATKRYVC-QNAEESLDHILWHCNFAVGAWSWIS---GIFNLTPNVNLT-FSYKEAKGSS 759
           L  + Y C +  ++ L HIL   NFA   W   +   GI  +  N+  T  S++     +
Sbjct: 72  L--ECYCCYRKGKDDLKHILITGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYN 129

Query: 760 RIIKELWLIANLVIRSELWFTRNKKVYEKKAPNGLF 867
            + K +  I   +I   LW  R    Y  K P+ ++
Sbjct: 130 EVHKLILHILPNIICWNLWKNRCSAKYGNK-PSSIY 164


>ref|XP_004304990.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 202

 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 59/164 (35%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            MHN V+DL+I+  F    R  R  + I   W PP  G + +  DGA +    V G G I 
Sbjct: 37   MHNLVQDLQIIKSFGAECRLGRAPRVIEVVWHPPVIGWVKINSDGAWKHAEGVGGFGAIF 96

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLE--WTRKWNIGRILIRSDSSSVIKALQS 1274
            R+  C VLGA S  + I ++  AE   +IV +E  W R W    I +  DSS V+  L+S
Sbjct: 97   RDFKCHVLGAFSSNIDIPSSVAAEVIAVIVAIELAWVRDWK--HIWLEVDSSLVLDYLRS 154

Query: 1275 G-DIPWFAMQHWLEVRDMYDSV--RFMHTFSEANFSADILAKRG 1397
               +PW     WL        +  R  H F E N  AD LA  G
Sbjct: 155  PLLVPWHLRVRWLNCLRCISKMIFRSSHIFREGNKVADALANHG 198


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 58.9 bits (141), Expect(2) = 4e-12
 Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
 Frame = +3

Query: 972  HRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGI 1151
            H K+ +++     W+ P+ G+  L  DG++  N    G G I R+    ++ A S+  G 
Sbjct: 1269 HYKILIVK-----WNKPDLGKYKLNTDGSALQNSGKIGGGGILRDNQGKIIYAFSLPFGF 1323

Query: 1152 TTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQSG-DIPW---FAMQHWLEVR 1319
             TN  AE    + GL+W  +    +I +  DS  +   + S  +IPW     +Q   ++ 
Sbjct: 1324 GTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWINSNINIPWRYEELIQQIHQII 1383

Query: 1320 DMYDSVRFMHTFSEANFSADILAK 1391
               D  +  H + EAN +AD+L+K
Sbjct: 1384 RKMDQFQCHHIYREANCTADLLSK 1407



 Score = 40.8 bits (94), Expect(2) = 4e-12
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
 Frame = +1

Query: 409  TFKGKFSVCSARELIRTKYYPLEGVNLLWQQPIHPSLAAQNWKFLRGACATMDKVRSRFR 588
            T  G+F++ SA + IR K       N++W + I   ++   W+ LRG   T + ++ R  
Sbjct: 1075 TESGQFTISSAWDSIRKKRNKDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQ-RIG 1133

Query: 589  YSLATKRYVCQN-AEESLDHILWHCNFAVGAWSWISGIFNLTPNVNLT-----FSYKEAK 750
             +L +  Y C N  ++ ++HIL + NFA   W   S    + P +N T       ++  +
Sbjct: 1134 KNL-SDCYCCYNKGKDDINHILINGNFAKYIWKIYSSAVGVLP-INTTLRDLLLQWRNQQ 1191

Query: 751  GSSRIIKELWLIANLVIRSELWFTRNKKVYEKKAPNGLFFQQRVF-NFMSI 900
             ++ + K L  I    I   LW  R    Y  K  +    Q  +F N M +
Sbjct: 1192 YTNEVHKLLIHILPNFICWNLWKNRCAVKYGLKNSSIYRVQYGIFKNIMQV 1242


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 77.4 bits (189), Expect = 2e-11
 Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
 Frame = +3

Query: 924  HNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIAR 1103
            ++ ++D ++   F +  +  RV   +   W PP    + + CDG+S G       G++ R
Sbjct: 24   NSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIR 83

Query: 1104 NVDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQSG-D 1280
            + +   LGA S  +G  T   AEF   ++ +E  ++  +  + + +DS  V+ A   G  
Sbjct: 84   DSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGLG 143

Query: 1281 IPWFAMQHWLEVRDMYDSV--RFMHTFSEANFSADILAKRG 1397
            +PW     W    D  DS+    +H   E N  AD LAK G
Sbjct: 144  VPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHG 184


>ref|XP_006849381.1| hypothetical protein AMTR_s00158p00089990 [Amborella trichopoda]
            gi|548852928|gb|ERN10962.1| hypothetical protein
            AMTR_s00158p00089990 [Amborella trichopoda]
          Length = 143

 Score = 76.3 bits (186), Expect = 3e-11
 Identities = 49/128 (38%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = +3

Query: 939  DLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCD 1118
            DL+IL  F +   + R   P+   W  P  G   L  DGA  GN + +GAG + +N    
Sbjct: 17   DLQILRTFDIPAERSRPKTPVEIIWRKPIEGWFKLNVDGAL-GNLDHSGAGGVFKN-SMS 74

Query: 1119 VLGAT-SVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQSGDIPWFA 1295
            +LG T S  LG TTNF AEF  +  G+E  ++  + R+ I  DS +VI+A++   IPW  
Sbjct: 75   ILGWTVSSRLGNTTNFFAEFAALFQGIEIAKEKGVERVWIECDSIAVIEAIKGRKIPWTF 134

Query: 1296 MQHWLEVR 1319
             Q WL +R
Sbjct: 135  SQKWLILR 142


>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 197

 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            M NTV +L IL    +  R  +  + +   W  P   ++ L  DGA+RG+P +AG G I 
Sbjct: 1    MKNTVGELCILHRIGIKGRPSKAPKIVEVMWHVPSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQS-- 1274
            R+    VLG  S  LGI     AE   +I  ++   +     + I SDS+ VI  L S  
Sbjct: 61   RDHLGHVLGCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQ 120

Query: 1275 GDIPWFAMQHWLEVRDMYD--SVRFMHTFSEANFSADILAKRG 1397
             D+PW     W   R +    +V+  H + E N  AD LA  G
Sbjct: 121  VDVPWRFTTEWFNCRTILTTMTVKVSHIYREGNSIADCLANFG 163


>ref|XP_007008704.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
            gi|508725617|gb|EOY17514.1| Uncharacterized protein
            TCM_042330 [Theobroma cacao]
          Length = 2249

 Score = 71.6 bits (174), Expect = 9e-10
 Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
 Frame = +3

Query: 1011 WSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGITTNFLAEFYGIIV 1190
            W  P  GE  L  DG+++ +   AG GV+  +    V G  S  LGI  +  AE   +  
Sbjct: 2086 WHKPSIGEFKLNVDGSAKLSQNAAGGGVLRDHAGVMVFGF-SENLGIQNSLQAELLALYR 2144

Query: 1191 GLEWTRKWNIGRILIRSDSSSVIKALQSGDIPWFAMQHWL-EVRDM--YDSVRFMHTFSE 1361
            GL   R +NI R+ I  D++SVI+ LQ       A+++ L  +R +  + S R  H F E
Sbjct: 2145 GLILCRDYNIRRLWIEMDAASVIRLLQGNQRGPHAIRYLLVSIRQLLSHFSFRLSHIFRE 2204

Query: 1362 ANFSADILAKRGLFATR*RRNFNYGGRLDFINSIELPYVPYIRFK 1496
             N +AD LA RG      +      G+L  +  ++   +PY+RFK
Sbjct: 2205 GNQAADFLANRGHEHQSLQVVTVAQGKLRGMLRLDQTSLPYVRFK 2249


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
 Frame = +3

Query: 984  RVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGITTNF 1163
            R I  +   W PP+   +    DGA RGNP ++  G   R+   D++ A + G+GI TN 
Sbjct: 691  RKIHVLRVTWKPPDDHYVKSNTDGACRGNPGLSSFGFCIRDDKGDLIYAKAKGIGIATNM 750

Query: 1164 LAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKAL-QSGDIPWFAMQHWLEVRDMYDSV- 1337
             AE   I+  L       + +++I +DS S+ K + Q+  +PW   +   E+R++ + + 
Sbjct: 751  EAETVAILTALRECSNRKMQKVIIETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIK 810

Query: 1338 -RFMHTFSEANFSADILA 1388
             +  H F E N  AD LA
Sbjct: 811  AKITHIFREGNSLADSLA 828


>ref|XP_007022832.1| Uncharacterized protein TCM_026877 [Theobroma cacao]
            gi|508778198|gb|EOY25454.1| Uncharacterized protein
            TCM_026877 [Theobroma cacao]
          Length = 2367

 Score = 71.2 bits (173), Expect = 1e-09
 Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 3/165 (1%)
 Frame = +3

Query: 1011 WSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGITTNFLAEFYGIIV 1190
            W  P  GE  L  DG+++ +   AG GV+  +    + G  S  LGI  +  AE   +  
Sbjct: 2204 WHKPSNGEFKLNVDGSAKLSQNAAGGGVLRDHAGVMIFGF-SENLGIQNSLKAELLALYR 2262

Query: 1191 GLEWTRKWNIGRILIRSDSSSVIKALQSGDIPWFAMQHWL-EVRDM--YDSVRFMHTFSE 1361
            GL   R +NI R+ I  D++SVI+ LQ       A+++ L  +R +  + S R  H F E
Sbjct: 2263 GLILCRDYNIRRLWIEMDATSVIRLLQGNHRGPHAIRYLLGSIRQLLSHFSFRLTHIFRE 2322

Query: 1362 ANFSADILAKRGLFATR*RRNFNYGGRLDFINSIELPYVPYIRFK 1496
             N +AD LA RG      +      G+L  +  ++   +PY+RFK
Sbjct: 2323 GNQAADFLANRGHEHQSLQVITVAQGKLRGMLRLDQTSLPYVRFK 2367


>ref|XP_007017129.1| Uncharacterized protein TCM_042328 [Theobroma cacao]
            gi|508787492|gb|EOY34748.1| Uncharacterized protein
            TCM_042328 [Theobroma cacao]
          Length = 910

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
 Frame = +3

Query: 1011 WSPPEPGELLLRCDGASRGNPEVAGAGVIARNVDCDVLGATSVGLGITTNFLAEFYGIIV 1190
            W  P  GE  L  DG+++ +   AG G++  +    V G  S  LGI  +  AE   +  
Sbjct: 747  WHKPTTGEFKLNVDGSAKHSHNAAGGGILRDHAGVMVFGF-SENLGIQNSLQAELLALYR 805

Query: 1191 GLEWTRKWNIGRILIRSDSSSVIKALQSGDIPWFAMQH-WLEVRDM--YDSVRFMHTFSE 1361
            GL   R +NI R+ I  D+ SVI+ LQ       A+++  + +R +  + S RF H F E
Sbjct: 806  GLILCRDYNIRRLWIEMDAISVIRLLQGNHRGPHAIRYLMVSLRQLLSHFSFRFSHIFRE 865

Query: 1362 ANFSADILAKRGLFATR*RRNFNYGGRLDFINSIELPYVPYIRFK 1496
             N +AD LA RG      +      G+L  +  ++    PY+RFK
Sbjct: 866  GNQAADFLANRGHEHQNLQVFTVAQGKLRGMLRLDQTSFPYVRFK 910


>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 197

 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
 Frame = +3

Query: 921  MHNTVEDLRILDFFRVCHRKLRVIQPIACFWSPPEPGELLLRCDGASRGNPEVAGAGVIA 1100
            M NTV +L IL    +  R  +V + +   W      ++ L  DGA+RG+P +AG G I 
Sbjct: 1    MKNTVGELCILHRIGIKGRPSKVPKIVEVMWHVLSIYQVKLNTDGAARGSPGLAGFGGIF 60

Query: 1101 RNVDCDVLGATSVGLGITTNFLAEFYGIIVGLEWTRKWNIGRILIRSDSSSVIKALQS-- 1274
            R+    VL   S  LGI T   AE   +I  ++   +     + I SDS+ VI  L S  
Sbjct: 61   RDHLGQVLCCFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQ 120

Query: 1275 GDIPWFAMQHWLEVRDMYDS--VRFMHTFSEANFSADILAKRG 1397
             D+PW     W   R +  S  V+  H + E N  AD LA  G
Sbjct: 121  VDVPWRFTTEWFNCRTILTSMTVKVSHIYREGNRVADCLANFG 163