BLASTX nr result
ID: Papaver27_contig00000229
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00000229
(2276 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU31709.1| hypothetical protein MIMGU_mgv1a024293mg, partial... 167 3e-38
gb|ABB46871.2| retrotransposon protein, putative, Ty3-gypsy subc... 145 6e-32
gb|AAM01019.1|AC090488_19 Putative retroelement [Oryza sativa Ja... 145 6e-32
gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa] gi... 145 1e-31
gb|ABA94439.1| retrotransposon protein, putative, Ty3-gypsy subc... 144 1e-31
emb|CAH66904.1| H0823A09.5 [Oryza sativa Indica Group] 144 2e-31
emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group] 144 2e-31
gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subc... 143 3e-31
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 143 3e-31
gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subc... 143 4e-31
gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group... 143 4e-31
gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group] 143 4e-31
gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa] 143 4e-31
gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subc... 142 5e-31
gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subc... 142 5e-31
gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subc... 142 9e-31
emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group] 142 9e-31
gb|AAV31295.1| putative polyprotein [Oryza sativa Japonica Group] 142 9e-31
gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group] 142 9e-31
emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group] 142 9e-31
>gb|EYU31709.1| hypothetical protein MIMGU_mgv1a024293mg, partial [Mimulus guttatus]
Length = 674
Score = 167 bits (422), Expect = 3e-38
Identities = 130/451 (28%), Positives = 207/451 (45%), Gaps = 31/451 (6%)
Frame = -2
Query: 1261 QYLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVS-NDRDTWVKFVTYRFRGPSRDWWNA 1085
++L+L F G P +P AEEWL+ L+ D V F ++ +G + WW
Sbjct: 89 EFLRLDTPTFHGEP-DPLAAEEWLEQITRNLDTSRITDGGMRVSFAVHQLKGDAYHWWKR 147
Query: 1084 VIKAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
V ++ F +F+D+Y P++ RD +FM L +G MS++ Y KF L+R+
Sbjct: 148 VKLTVADN--FETFSRVFLDRYFPETTRDTFRQQFMDLIQGNMSVAHYEAKFTSLARFAN 205
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
EL++T+E + K+F RGL +R++L+ LRI+TY D + L + + D
Sbjct: 206 ELVSTEELRCKRFERGLKISIRERLAALRIRTYSDIVDTAATVEETLQDTRRIRD----- 260
Query: 724 VRERPPQFSARQDP----AKRQMMS----------FPGQTFYIPPIRP--WQPGSTSRPI 593
RP Q D AKRQ S ++ ++ I P P ST+
Sbjct: 261 --SRPQQGGNTIDSEGRFAKRQKSSNSVSHAQGKHQSSKSVHVESIAPTAHTPQSTTCYH 318
Query: 592 APRPPSVR---PQGQTF*PQGRWMRFQQVRPATLTNSDSSFERCWECGKTDHLRRDCPQL 422
+P R PQ + G+ R Q +P + S+ C+ CG+ H+ R CPQ
Sbjct: 319 CHQPGHRRYDCPQREK--RAGQLQRPYQGQPQGIIQSNRP-PTCYSCGEAGHISRYCPQS 375
Query: 421 RKPPTGLSQQGMVYASESA*ISTPETSQENQ-------VFYTMME----GDGSATNQVVE 275
+ P ++++SA T ++ Y+++ + S+ V +
Sbjct: 376 QGTPNMAKSYPPTHSTQSAPPRTHVGGKQGHGGHGTQGRVYSVVRAPNLAEESSNPSVAQ 435
Query: 274 GKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQK 95
G L+FN VL D+G++ S I+L LGLK L + TP+ ++C+
Sbjct: 436 GTFLVFNSWASVLIDTGASHSFISLAFALSLGLKIEALDVPLCIDTPVSGGVTLREICRS 495
Query: 94 CVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
C + + D L DL++L M FDVILGMDWL
Sbjct: 496 CEIKIADHSLVFDLIILDMVSFDVILGMDWL 526
>gb|ABB46871.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1446
Score = 145 bits (367), Expect = 6e-32
Identities = 130/471 (27%), Positives = 196/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 184 KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 241 GDYADFERLVDKAIRQEDQRNKMDR------KRKATQFRAPQGSHQRPRFT-PGQQGGPT 293
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G ++R APRPP Q P + +
Sbjct: 294 TMIVRQYRPFNPSNFPQGSSGSQNHHGGQSNRGAAPRPPMAPAQSG---PSAQAKKETGA 350
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 351 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 389
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 390 ----------EAQAAPEVVLGTFPVNSIPAIVLFDSGATHSFISKKFVGMHGLIREKLST 439
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L DVILGMDWL
Sbjct: 440 PMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLESKDLDVILGMDWL 489
>gb|AAM01019.1|AC090488_19 Putative retroelement [Oryza sativa Japonica Group]
Length = 1475
Score = 145 bits (367), Expect = 6e-32
Identities = 130/471 (27%), Positives = 196/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 184 KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 241 GDYADFERLVDKAIRQEDQRNKMDR------KRKATQFRAPQGSHQRPRFT-PGQQGGPT 293
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G ++R APRPP Q P + +
Sbjct: 294 TMIVRQYRPFNPSNFPQGSSGSQNHHGGQSNRGAAPRPPMAPAQSG---PSAQAKKETGA 350
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 351 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 389
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 390 ----------EAQAAPEVVLGTFPVNSIPAIVLFDSGATHSFISKKFVGMHGLIREKLST 439
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L DVILGMDWL
Sbjct: 440 PMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLESKDLDVILGMDWL 489
>gb|AAL78107.1|AC093568_17 Putative polyprotein [Oryza sativa]
gi|21321760|gb|AAM47295.1|AC122146_14 Putative
polyprotein [Oryza sativa Japonica Group]
gi|31430576|gb|AAP52470.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1819
Score = 145 bits (365), Expect = 1e-31
Identities = 134/472 (28%), Positives = 195/472 (41%), Gaps = 29/472 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 363 HQQMHQRMMQYAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 421
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 422 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 481
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 482 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 538
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 539 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAHQGSHQRPRFT-PGQQGGPT 591
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 518
T + RP+ P G +R APRPP Q GQ Q
Sbjct: 592 TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPMAPAQSGQP----------TQ 641
Query: 517 VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQ 338
+ T S C+ CG+ H CP+ R+ Q + +AS
Sbjct: 642 AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE---------- 687
Query: 337 ENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTG 158
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 688 -----------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREELS 736
Query: 157 KMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L G DVILGMDWL
Sbjct: 737 TPMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLDSKGLDVILGMDWL 787
>gb|ABA94439.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1267
Score = 144 bits (364), Expect = 1e-31
Identities = 128/471 (27%), Positives = 196/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 184 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 241 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 293
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G ++R APRPP Q P + +
Sbjct: 294 TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSS---PPAQAKKETGA 350
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 351 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 389
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + VLFDSG+T S I+ + V GL++
Sbjct: 390 ----------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKEELST 439
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + ++ + A+L++L DVILGMDWL
Sbjct: 440 PMRVHTP-GNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWL 489
>emb|CAH66904.1| H0823A09.5 [Oryza sativa Indica Group]
Length = 1716
Score = 144 bits (362), Expect = 2e-31
Identities = 133/472 (28%), Positives = 196/472 (41%), Gaps = 29/472 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 329 HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 387
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 388 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 447
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 448 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 504
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 505 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 557
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 518
T + RP+ P G +R APRPP Q GQ Q
Sbjct: 558 TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPVAPAQSGQP----------AQ 607
Query: 517 VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQ 338
+ T S C+ CG+ H CP+ R+ +Q + +AS
Sbjct: 608 AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFNQARVNHASAE---------- 653
Query: 337 ENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTG 158
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 654 -----------EAQAVPEVVLGTFPVNSIPATVLFDSGATHSFISTKFVGMHGLIREELS 702
Query: 157 KMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L DVILGMDWL
Sbjct: 703 TPMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLESKDLDVILGMDWL 753
>emb|CAH66707.1| OSIGBa0147J19.11 [Oryza sativa Indica Group]
Length = 1851
Score = 144 bits (362), Expect = 2e-31
Identities = 125/447 (27%), Positives = 189/447 (42%), Gaps = 28/447 (6%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L+ P EFS T P +A++WL+ + L V + +++ RGP+ DWW
Sbjct: 421 FLRSRPPEFSQTV-EPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWENYC 479
Query: 1078 KA--EGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
A E I WD F + F +VP+S D K EF L +G S++ Y +F +L+RY
Sbjct: 480 NAHPEPTNIVWDEFAMAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAP 539
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TD+ K +KF++G+ MR Q+ D T++ +N+ L E ++
Sbjct: 540 EEVNTDKKKIRKFLKGIAVGMRLQMLA------HDFPTFQHMINKALLLEDARKEATEEY 593
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF*P 545
+ + A R P Q QPG RP RP PQ Q P
Sbjct: 594 KKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQANHQPGYAPRPQMNRP---APQPQQRAP 650
Query: 544 QGRWMRFQQVRPATLTNSDSSFE--------RCWECGKTDHLRRDCPQLRKPPTGLSQQG 389
G T NS +SF+ +C+ C +T H R CPQ PT + G
Sbjct: 651 SGN----------TAPNSVTSFKSPQGPSAVQCFRCNQTGHYARQCPQ---NPTN-TNSG 696
Query: 388 MVYASESA*ISTPETSQENQVFYTMMEGDGSATN------------------QVVEGKIL 263
S +A TP +Q +G ++ N VV G
Sbjct: 697 HANGS-TARTPTPAVAQSRPSSQASGQGSRASNNFGRGRVNHIQAETAQDAPDVVMGMFS 755
Query: 262 LFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQKCVLM 83
+ + VLFDSG++ S I+ V G K +++ +P GR Q+C + L
Sbjct: 756 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSP-GRNIRATQICPEVNLR 814
Query: 82 VDDQELFADLVVL*MCGFDVILGMDWL 2
+++ + A +VL D+ILGMDWL
Sbjct: 815 IEEVDFLAKPIVLDSQSLDIILGMDWL 841
>gb|ABA94569.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1777
Score = 143 bits (361), Expect = 3e-31
Identities = 129/471 (27%), Positives = 195/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 321 HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 379
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 380 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 439
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 440 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 496
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 497 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFT-PGQQGGPT 549
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G +R APRPP Q P + +
Sbjct: 550 TMIVRQHRPFNPSNFHPGSSGSQNHHGGQPNRGTAPRPPMAPAQSG---PPAQAKKETGA 606
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS + PE
Sbjct: 607 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAEEAQTAPE---- 652
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
VV G + + VLFDSG+T S I+ + V GL++
Sbjct: 653 -----------------VVLGTFPVNSIPATVLFDSGATHSFISKKFVGRYGLRKEELST 695
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + ++ + A+L++L DVILGMDWL
Sbjct: 696 PMRVHTP-GNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWL 745
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 143 bits (361), Expect = 3e-31
Identities = 126/447 (28%), Positives = 187/447 (41%), Gaps = 28/447 (6%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L+ P EFS T P +A++WL+ + L V + +++ RGP+ DWW
Sbjct: 447 FLRSRPPEFSQTV-EPVEADDWLKDVDRKLNLVQCTPVEKTLYASHQLRGPAADWWENYC 505
Query: 1078 KA--EGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
A E I WD F F +VP+S D K EF L +G SI+ Y +F +L+RY
Sbjct: 506 NAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSINEYLSQFNKLARYAP 565
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TD+ K +KF++G+ MR QL D T++ +N+ L E ++
Sbjct: 566 EEVDTDKKKIRKFLKGIAVGMRLQLLA------HDFPTFQHMINKALLLEDARKEATEEY 619
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF*P 545
+ + A R P Q QPG RP RP PQ Q P
Sbjct: 620 KKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQPGYAPRPQINRP---APQPQQRAP 676
Query: 544 QGRWMRFQQVRPATLTNSDSSFE--------RCWECGKTDHLRRDCPQLRKPPTGLSQQG 389
G T NS +SF+ +C+ C + H R CPQ PP + G
Sbjct: 677 SGN----------TAPNSVTSFKSPQGPSAVQCFRCNQMGHYARQCPQ--NPPN--TNSG 722
Query: 388 MVYASESA*ISTPETSQENQVFYTMMEGDGSATN------------------QVVEGKIL 263
S +A TP +Q +G ++ N VV G
Sbjct: 723 HANGS-TARTPTPAATQSRPSSQASGQGSRASNNFGRGRVNHIQAETAQDAPDVVMGMFS 781
Query: 262 LFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQKCVLM 83
+ + VLFDSG++ S I+ V G K +++ +P GR Q+C + L
Sbjct: 782 VNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSP-GRNIRATQICPEVNLR 840
Query: 82 VDDQELFADLVVL*MCGFDVILGMDWL 2
+++ + A +VL D+ILGMDWL
Sbjct: 841 IEEVDFLAKPIVLDSQSLDIILGMDWL 867
>gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1521
Score = 143 bits (360), Expect = 4e-31
Identities = 133/472 (28%), Positives = 194/472 (41%), Gaps = 29/472 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ KQL
Sbjct: 184 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTKQLIS--- 240
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF + Q R + PGQ
Sbjct: 241 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRSNQGSQHRPRFT-PGQQGGPT 293
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQQ 518
T + RP+ P G +R APRPP Q GQ Q
Sbjct: 294 TMIVRQHRPFNPSNFHQGTSGSQNHHGGQPNRGAAPRPPMAPAQSGQP----------AQ 343
Query: 517 VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQ 338
+ T S C+ CG+ H CP+ R+ Q + +AS
Sbjct: 344 AKKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE---------- 389
Query: 337 ENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTG 158
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 390 -----------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREELS 438
Query: 157 KMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L DVILGMDWL
Sbjct: 439 TPMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLESKDLDVILGMDWL 489
>gb|AAN04919.1| Putative polyprotein [Oryza sativa Japonica Group]
gi|31430212|gb|AAP52158.1| retrotransposon protein,
putative, Ty3-gypsy subclass, expressed [Oryza sativa
Japonica Group]
Length = 1719
Score = 143 bits (360), Expect = 4e-31
Identities = 138/473 (29%), Positives = 198/473 (41%), Gaps = 30/473 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L + P FS T NP +A +WL E L
Sbjct: 312 HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLGVRPPTFSSTT-NPMEANDWLHAIEKKL 370
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 371 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 430
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL I
Sbjct: 431 KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQL----I 486
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRER-PPQFSARQDPAKRQMMSFPGQ---- 650
Y Y D R +D EDQ R+R QF A Q +R + PGQ
Sbjct: 487 SGY-----YAD-FERLVDKAIRQEDQRNKMDRKRKAAQFRAHQGSHQRPRFT-PGQQGGP 539
Query: 649 -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQ 521
T + RP+ P G +R APRPP Q GQ
Sbjct: 540 TTMIVRQHRPFNPSNFYQGTSDSQNHHGGQPNRGAAPRPPVASAQSGQP----------A 589
Query: 520 QVRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETS 341
Q + T S C+ CG+ H CP+ R+ Q + +AS
Sbjct: 590 QAKKETEAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE--------- 636
Query: 340 QENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLT 161
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 637 ------------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREEL 684
Query: 160 GKMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + + A+L++L DVILGMDWL
Sbjct: 685 STPMRVHTP-GNSSTSVQFSPSITIEIQRSPVLANLILLESKDLDVILGMDWL 736
>gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1850
Score = 143 bits (360), Expect = 4e-31
Identities = 128/472 (27%), Positives = 196/472 (41%), Gaps = 29/472 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 297 HQQMHQRMMQHVEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 355
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 356 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCCSFRKAQVPDGVVAQ 415
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 416 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 472
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSF-PGQ---- 650
Y D D R D +M+ + + QF R P Q F PGQ
Sbjct: 473 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQF--RAPPGSHQRPRFAPGQQGGP 524
Query: 649 -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQ 518
T + RP+ P G ++R APRPP Q P + +
Sbjct: 525 TTMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQSKKETG 581
Query: 517 VRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQ 338
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 582 AKPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE---------- 621
Query: 337 ENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTG 158
+ A +VV G + + VLFDSG+T S ++ + V GL++
Sbjct: 622 -----------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFVSKKFVGMHGLRKEELS 670
Query: 157 KMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + ++ + A+L++L DVILGMDWL
Sbjct: 671 TPMRVHTP-GNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWL 721
>gb|AAL69439.1|AC098565_21 Putative polyprotein [Oryza sativa]
Length = 1181
Score = 143 bits (360), Expect = 4e-31
Identities = 138/473 (29%), Positives = 198/473 (41%), Gaps = 30/473 (6%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ + +QHQ FG ++L + P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMMQHVEQQHQHFGPPPPQSKLPEFLGVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL I
Sbjct: 184 KKREFRALHQGNRTVTEYLHEFNRLTRYAPEDVRTDAEKQEKFMAGLDDELTNQL----I 239
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRER-PPQFSARQDPAKRQMMSFPGQ---- 650
Y Y D R +D EDQ R+R QF A Q +R + PGQ
Sbjct: 240 SGY-----YAD-FERLVDKAIRQEDQRNKMDRKRKAAQFRAHQGSHQRPRFT-PGQQGGP 292
Query: 649 -TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQ-GQTF*PQGRWMRFQ 521
T + RP+ P G +R APRPP Q GQ
Sbjct: 293 TTMIVRQHRPFNPSNFYQGTSDSQNHHGGQPNRGAAPRPPVASAQSGQP----------A 342
Query: 520 QVRPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETS 341
Q + T S C+ CG+ H CP+ R+ Q + +AS
Sbjct: 343 QAKKETEAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE--------- 389
Query: 340 QENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLT 161
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 390 ------------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMHGLIREEL 437
Query: 160 GKMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + + A+L++L DVILGMDWL
Sbjct: 438 STPMRVHTP-GNSSTSVQFSPSITIEIQRSPVLANLILLESKDLDVILGMDWL 489
>gb|ABA97433.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1672
Score = 142 bits (359), Expect = 5e-31
Identities = 130/471 (27%), Positives = 194/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M ML +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 255 HQQMHQRMLQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 313
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 314 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWVEFCRSFRKAQVPDGVVAQ 373
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G +++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 374 KKREFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 430
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + P Q
Sbjct: 431 GDYADVERLVDKAIRQEDQRNKMDR------KRKAAQFRAPQGSHQRPRFA-PRQQGGPT 483
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G ++R APRPP Q P + +
Sbjct: 484 TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQAKKETGA 540
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 541 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 579
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + VLFDSG+T S I+ + V GL R
Sbjct: 580 ----------EAQAAPEVVLGTFSINSIPATVLFDSGATHSFISKKFVGMHGLIREELST 629
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + Q + + A+L++L DVILGMDWL
Sbjct: 630 PMRVHTP-GNSSTSVQFSPSITIEIQRSPFLANLILLESKDLDVILGMDWL 679
>gb|AAP53928.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1364
Score = 142 bits (359), Expect = 5e-31
Identities = 128/471 (27%), Positives = 196/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M ML +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 65 HQQMHQRMLQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 123
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 124 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 183
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G + + Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 184 KKREFRALHQGNRTATVYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 240
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF A Q +R + PGQ
Sbjct: 241 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRADQGSHQRPRFT-PGQQGGPT 293
Query: 649 TFYIPPIRPWQP---------------GSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ P G ++R APRPP Q P + +
Sbjct: 294 TMIVRQHRPFNPSNFPQGASGSQNHHGGQSNRGAAPRPPMAPAQSG---PPAQAKKETGA 350
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+P + C+ CG+ H CP+ R+ Q + +AS
Sbjct: 351 KPGS----------CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 389
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + +LFDSG+T S I+ + V GL++
Sbjct: 390 ----------EAQAAPEVVLGTFPVNSIPATILFDSGATHSFISKKFVGMHGLRKEELST 439
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
++ + T LG + ++ + A+L++L DVILGMDWL
Sbjct: 440 LMRVYT-LGNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWL 489
>gb|ABA96609.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1556
Score = 142 bits (357), Expect = 9e-31
Identities = 125/452 (27%), Positives = 189/452 (41%), Gaps = 33/452 (7%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L+ P EFS T P +A++WL+ + L V + +++ RGP+ DWW
Sbjct: 142 FLRSCPPEFSQTV-EPVEADDWLKDVDRKLNFVQCTPVEKTLYASHQLRGPAADWWENYC 200
Query: 1078 KA--EGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
A E I WD F F +VP+S D K EF L +G S++ Y +F +L+RY
Sbjct: 201 NAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNSSVNEYLSQFNKLARYAP 260
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TD+ K +KF++G+ MR QL D T++ +N+ L E ++
Sbjct: 261 EEVDTDKKKIRKFLKGIAVGMRLQLLA------HDFPTFQHMINKALLLEDARKEATEEY 314
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF*P 545
+ + A R P Q QPG RP RP PQ Q P
Sbjct: 315 KKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQANHQPGYAPRPQMNRP---APQPQQRAP 371
Query: 544 QGRWMRFQQVRPATLTNSDSSFE--------RCWECGKTDHLRRDCPQLRKPPTGLSQQG 389
G T NS +SF+ +C+ C + H R CP + PT + G
Sbjct: 372 SGN----------TAPNSVTSFKSPQGPSAVQCFRCNRMGHYARQCP---RNPTN-TNSG 417
Query: 388 MVYASESA*ISTPETSQENQVFYTMMEGDGS-ATNQVVEGKILLFNHL------------ 248
S + TP + + + G GS A+N G++ NH+
Sbjct: 418 HANGSTA---RTPAPAAAQSLPSSQASGQGSRASNHFGRGRV---NHIQAETAQDAPDVV 471
Query: 247 ----------VHVLFDSGSTRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQ 98
VLFDSG++ S I+ V G K +++ +P GR Q+C
Sbjct: 472 MGMFSVNSVPAIVLFDSGASHSFISQAFVKRNGWKTQNLRVPMIVHSP-GRNIRATQICP 530
Query: 97 KCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ L +++ + A +VL D+ILGMDWL
Sbjct: 531 EVNLRIEEVDFLAKPIVLDSQSLDIILGMDWL 562
>emb|CAH65904.1| H0207B04.5 [Oryza sativa Indica Group]
Length = 1481
Score = 142 bits (357), Expect = 9e-31
Identities = 117/433 (27%), Positives = 187/433 (43%), Gaps = 14/433 (3%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L++ P FS T NP +A +WL E L+ + V F +++ GP+ +WW+
Sbjct: 66 FLRVRPPTFSSTT-NPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFR 124
Query: 1078 KAE--GGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
+ G ITW F F ++P V K EF +L +G S++ Y F RL+RY
Sbjct: 125 QGRVGGEPITWQEFTAAFKKTHIPTGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP 184
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TDE +++KF+ GL+ E+ L + ++ D R D ME +
Sbjct: 185 EDVRTDEERQEKFLEGLNDELSYTLMSTEFRDFQQ---LVDKAIRQEDKYNRMEQK---- 237
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF-- 551
+ R QF A+Q +R + Q P Q GS+S VRPQ Q +
Sbjct: 238 -KRRAAQFKAQQGSNQRPRLVTGSQVPSYP-----QVGSSS--------VVRPQRQFYNN 283
Query: 550 --*PQGRWMRFQQVRPATLTNSDSSFER--------CWECGKTDHLRRDCPQLRKPPTGL 401
+G R VRPA + + C+ CG H CP+ R+
Sbjct: 284 NTGNRGNGNRNVVVRPAVTPTQNQPVRKEQGGKPVICFNCGDPGHYADKCPKPRRVKN-- 341
Query: 400 SQQGMVYASESA*ISTPETSQENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGS 221
AS ++ + P+ + + + VV G + + VLFDSG+
Sbjct: 342 -----APASTNSNVPAPKARVNH-----VAAAEAQNAPDVVLGTFPVNSIPATVLFDSGA 391
Query: 220 TRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL* 41
T S ++ S+ G++ G+ L++ TP G + Q C + +++ + L++L
Sbjct: 392 THSFLSKSFASKHGMEVVSLGRPLLVNTP-GNQVFSTQYCPSVTIEIEEVPFPSSLILLE 450
Query: 40 MCGFDVILGMDWL 2
DVILGMDWL
Sbjct: 451 SKDLDVILGMDWL 463
>gb|AAV31295.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1374
Score = 142 bits (357), Expect = 9e-31
Identities = 118/433 (27%), Positives = 187/433 (43%), Gaps = 14/433 (3%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L + P FS T NP +A +WL E L+ + V F +++ GP+ +WW+
Sbjct: 70 FLHVRPPTFSSTT-NPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFR 128
Query: 1078 --KAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
+AEG ITW F F ++P V K EF +L +G S++ Y F RL+RY
Sbjct: 129 QGRAEGEPITWQEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP 188
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TDE +++KF+ GL+ E+ L + ++ D R D ME +
Sbjct: 189 EDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQ---LVDKAIRQEDKYNRMEQK---- 241
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF-- 551
+ R QF A+Q +R + Q P Q GS+S VRPQ Q +
Sbjct: 242 -KRRAAQFKAQQGSNQRPRLVTGPQAPSYP-----QGGSSS--------VVRPQRQFYNN 287
Query: 550 --*PQGRWMRFQQVRPATLTNSDSSFER--------CWECGKTDHLRRDCPQLRKPPTGL 401
+G R V PA + + + C+ CG H CP+ R+
Sbjct: 288 NTGNRGNDNRNMVVHPAATSAQNQPVRKEQGSKTVTCFNCGDLGHYADKCPKPRRVKN-- 345
Query: 400 SQQGMVYASESA*ISTPETSQENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGS 221
V A ++ + P+ + + + VV G + + VLFDSG+
Sbjct: 346 -----VPAPNNSNVPAPKARVNH-----VAAAEAQNAPDVVLGTFPVNSIPATVLFDSGA 395
Query: 220 TRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL* 41
T S ++ S G++ G+ L++ TP G + Q C + +++ + L++L
Sbjct: 396 THSFLSKSFASNHGMEVISLGRPLLVNTP-GNQAFSTQYCPSATIGIEEDPFPSSLILLE 454
Query: 40 MCGFDVILGMDWL 2
DVILGMDWL
Sbjct: 455 SKDLDVILGMDWL 467
>gb|AAT85240.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1472
Score = 142 bits (357), Expect = 9e-31
Identities = 118/433 (27%), Positives = 187/433 (43%), Gaps = 14/433 (3%)
Frame = -2
Query: 1258 YLKLAPEEFSGTPPNPEKAEEWLQHAEHVLEHVSNDRDTWVKFVTYRFRGPSRDWWNAVI 1079
+L + P FS T NP +A +WL E L+ + V F +++ GP+ +WW+
Sbjct: 70 FLHVRPPTFSSTT-NPVEAGDWLHAVEKKLDLIQCTEQEKVSFASHQLHGPAAEWWDHFR 128
Query: 1078 --KAEGGTITWDRFKVLFMDQYVPDSVRDRKFSEFMSLTKGGMSISAYNDKFLRLSRYGT 905
+AEG ITW F F ++P V K EF +L +G S++ Y F RL+RY
Sbjct: 129 QGRAEGEPITWQEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAP 188
Query: 904 ELIATDEAKEKKFIRGLDSEMRKQLSCLRIKTYEDA*TYEDALNRPLDYEKEMEDQLVT* 725
E + TDE +++KF+ GL+ E+ L + ++ D R D ME +
Sbjct: 189 EDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQ---LVDKAIRQEDKYNRMEQK---- 241
Query: 724 VRERPPQFSARQDPAKRQMMSFPGQTFYIPPIRPWQPGSTSRPIAPRPPSVRPQGQTF-- 551
+ R QF A+Q +R + Q P Q GS+S VRPQ Q +
Sbjct: 242 -KRRAAQFKAQQGSNQRPRLVTGPQAPSYP-----QGGSSS--------VVRPQRQFYNN 287
Query: 550 --*PQGRWMRFQQVRPATLTNSDSSFER--------CWECGKTDHLRRDCPQLRKPPTGL 401
+G R V PA + + + C+ CG H CP+ R+
Sbjct: 288 NTGNRGNDNRNMVVHPAATSAQNQPVRKEQGSKTVTCFNCGDLGHYADKCPKPRRVKN-- 345
Query: 400 SQQGMVYASESA*ISTPETSQENQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGS 221
V A ++ + P+ + + + VV G + + VLFDSG+
Sbjct: 346 -----VPAPNNSNVPAPKARVNH-----VAAAEAQNAPDVVLGTFPVNSIPATVLFDSGA 395
Query: 220 TRSLINLRIVSELGLKRTLTGKMLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL* 41
T S ++ S G++ G+ L++ TP G + Q C + +++ + L++L
Sbjct: 396 THSFLSKSFASNHGMEVISLGRPLLVNTP-GNQAFSTQYCPSATIGIEEDPFPSSLILLE 454
Query: 40 MCGFDVILGMDWL 2
DVILGMDWL
Sbjct: 455 SKDLDVILGMDWL 467
>emb|CAD40516.1| OSJNBa0023J03.1 [Oryza sativa Japonica Group]
Length = 1827
Score = 142 bits (357), Expect = 9e-31
Identities = 129/471 (27%), Positives = 194/471 (41%), Gaps = 28/471 (5%)
Frame = -2
Query: 1330 HAPMPDDMLVPLWKQHQ-FG-----QLFLQYLKLAPEEFSGTPPNPEKAEEWLQHAEHVL 1169
H M M+ +QHQ FG ++L++ P FS T NP +A +WL E L
Sbjct: 371 HQQMHQRMMQHAEQQHQQFGPPPPQSKLPEFLRVRPPTFSSTT-NPMEANDWLHAIEKKL 429
Query: 1168 EHVSNDRDTWVKFVTYRFRGPSRDWWN--AVIKAEGGTITWDRFKVLFMDQYVPDSVRDR 995
+ + V F T++ +GP+ WW+ + G +TW F F VPD V +
Sbjct: 430 NLLQCNDQEKVAFATHQLQGPASAWWDNHMATRPPGTEVTWAEFCRSFRKAQVPDGVVAQ 489
Query: 994 KFSEFMSLTKGGMSISAYNDKFLRLSRYGTELIATDEAKEKKFIRGLDSEMRKQLSCLRI 815
K EF +L +G M+++ Y +F RL+RY E + TD K++KF+ GLD E+ QL
Sbjct: 490 KKREFRALHQGNMTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLIS--- 546
Query: 814 KTYEDA*TYEDALNRPLDYEKEMEDQLVT*VRERPPQFSARQDPAKRQMMSFPGQ----- 650
Y D D R D +M+ + + QF + Q R + PGQ
Sbjct: 547 GDYADFERLVDKAIRQEDQRNKMDR------KRKAAQFRSNQGSQHRPRFT-PGQQGGPT 599
Query: 649 TFYIPPIRPW---------------QPGSTSRPIAPRPPSVRPQGQTF*PQGRWMRFQQV 515
T + RP+ Q G +R APRPP Q + Q
Sbjct: 600 TMIVRQHRPFNSSNFHQGTSGSQNHQGGQPNRGAAPRPPMAPAQS---------AQPAQA 650
Query: 514 RPATLTNSDSSFERCWECGKTDHLRRDCPQLRKPPTGLSQQGMVYASESA*ISTPETSQE 335
+ T S C+ CG+ H CP+ R+ Q + +AS
Sbjct: 651 KKETGAKPGS----CFNCGELGHFADKCPKPRRAGPRFIQARVNHASAE----------- 695
Query: 334 NQVFYTMMEGDGSATNQVVEGKILLFNHLVHVLFDSGSTRSLINLRIVSELGLKRTLTGK 155
+ A +VV G + + VLFDSG+T S I+ + V GL++
Sbjct: 696 ----------EAQAAPEVVLGTFPVNSIPATVLFDSGATHSFISKKFVGMYGLRKDELST 745
Query: 154 MLVLATPLGRRNCPFQVCQKCVLMVDDQELFADLVVL*MCGFDVILGMDWL 2
+ + TP G + ++ + A+L++L DVILGMDWL
Sbjct: 746 PMRVRTP-GNSSTSVSFSPSVLIEIQRSPFLANLILLESKDLDVILGMDWL 795