BLASTX nr result
ID: Papaver25_contig00043475
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00043475
(551 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 169 4e-40
gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas... 163 2e-38
ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306... 155 6e-36
ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein A... 145 6e-33
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat... 142 4e-32
gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ... 141 1e-31
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 134 1e-29
ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm... 116 4e-24
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 114 2e-23
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 110 2e-22
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 108 9e-22
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 108 1e-21
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 107 1e-21
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 107 1e-21
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 107 3e-21
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 106 3e-21
gb|ABD28538.2| RNA-directed DNA polymerase , putative [Medicago ... 106 4e-21
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 105 6e-21
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 105 7e-21
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 105 7e-21
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 169 bits (428), Expect = 4e-40
Identities = 75/167 (44%), Positives = 112/167 (67%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
YG SGQII+ +K ++ +HN R S ++D IP+G PF YLG PIF GKP+ AH Q
Sbjct: 213 YGSVSGQIINKDKSQVFIGKHNRRRHS-ISDCLGIPLGTAPFMYLGAPIFHGKPRVAHFQ 271
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
+I+D+++L ++W G LSM GR++++KSVI S +Y+F VY+W S + ++RW RNF+
Sbjct: 272 AIVDKVRLKLSSWVGSFLSMAGRLQLIKSVIYSMFVYTFQVYEWPVSLLRKVERWCRNFL 331
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKL 511
WSGDI+ V+W C ++EGGLG+K + LN + +LK W++
Sbjct: 332 WSGDIDKRGIPLVSWTSCCAPIDEGGLGLKKLDVLNSSLLLKRCWEI 378
>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 642
Score = 163 bits (413), Expect = 2e-38
Identities = 71/179 (39%), Positives = 111/179 (62%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
Y SGQI+++ K I++ R++ + + +G+LPF YLG PIF+GKPK H Q
Sbjct: 453 YADCSGQIMNIRKSFIFAGGITDTRMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQ 512
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
I D++K A WK LS+ GR+++VKSV+ S +++ +Y W + +++WI+NF+
Sbjct: 513 PIADKVKAKLAKWKASLLSIAGRIQLVKSVVQSMLVHTMSIYSWPIKILKEMEKWIKNFI 572
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQSIFGNSVR 547
WSGD+ +VAW K+C EGGLG+KS+ LN+A LK+ W L+Q+ + N +R
Sbjct: 573 WSGDVTKRKMVTVAWRKICADYEEGGLGVKSLICLNEATNLKICWNLMQSDEQWANIIR 631
>ref|XP_004305739.1| PREDICTED: uncharacterized protein LOC101306660 [Fragaria vesca
subsp. vesca]
Length = 330
Score = 155 bits (392), Expect = 6e-36
Identities = 70/170 (41%), Positives = 105/170 (61%)
Frame = +2
Query: 5 EVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAH 184
E YG NSGQ ++ K +Y + +R + + +PMG PF YLGVPIF G+PK +
Sbjct: 75 EKYGLNSGQFVNKSKSHVYLGKSAVHRRALIYSWLGVPMGKFPFMYLGVPIFVGRPKRVY 134
Query: 185 MQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRN 364
Q + DRI+ + WKG+SLSM GRV +V SV+ S +SF +Y W + + + WIRN
Sbjct: 135 FQVLTDRIRNAMSNWKGNSLSMAGRVTLVNSVVISMLSHSFTIYAWPKTVLQQVRNWIRN 194
Query: 365 FVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI 514
F+W+G+++ + VAW K C + EGGLG++++ +LN A +LK W +
Sbjct: 195 FIWTGNVSCRAYYPVAWKKCCAPLKEGGLGVRNIMALNQAFLLKKFWDFL 244
>ref|XP_004296004.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 751
Score = 145 bits (366), Expect = 6e-33
Identities = 68/179 (37%), Positives = 106/179 (59%)
Frame = +2
Query: 2 LEVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAA 181
L+ YG SGQ+++ +K T Y + +R V +G PF YLGVPIF+GKP
Sbjct: 149 LDNYGAASGQLVNKDKSTFYLGASHFHRRHQVKKILGFKLGTSPFSYLGVPIFKGKPCRK 208
Query: 182 HMQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIR 361
H+Q+++D+ K A WKG LSM GRV++V V S L+SF +Y W +S + L R
Sbjct: 209 HLQALVDKAKARLAGWKGKLLSMAGRVQLVHDVFQSMLLHSFSIYLWATSLLSHLSACAR 268
Query: 362 NFVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQSIFGN 538
NF+WSGD+ +++W +VC NE GL ++++K+L A ++ + W+ + S +G+
Sbjct: 269 NFIWSGDLAIRKLVTISWQQVCTPRNEAGLDLRNLKALYTAGLISLAWQTLLQSSSWGS 327
>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
Length = 480
Score = 142 bits (359), Expect = 4e-32
Identities = 72/172 (41%), Positives = 100/172 (58%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
Y + S QII+ K Y+ + +A + N+PF YLG PIF+GK K + Q
Sbjct: 181 YSEVSAQIINNNKSQFYAGAMTTSHSQMIAGTLGFSADNIPFFYLGCPIFKGKLKGIYFQ 240
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
SI+DRIK+ FA WK LS+MGRVE+VKS+I +YSF +Y W + LD WI+NF+
Sbjct: 241 SIVDRIKVKFAIWKCTLLSIMGRVELVKSIIHGMLVYSFQIYMWPRRLLHQLDSWIKNFI 300
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQS 526
WSGDI + +V+W +C GGL IK +N++ IL + W+ A S
Sbjct: 301 WSGDIYTHKVCTVSWKVMCRPWAAGGLDIKPTCLINESLILLLAWQFSTADS 352
>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
Length = 161
Score = 141 bits (355), Expect = 1e-31
Identities = 66/160 (41%), Positives = 103/160 (64%)
Frame = +2
Query: 32 IISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQSILDRIK 211
+++ K T+++ + ++++ + + G LPF YLGVPIF+GKPK H+Q I+D+I
Sbjct: 1 MVNPNKSTVFAGSISVSKLNQLINIIGFNHGTLPFTYLGVPIFKGKPKVIHLQPIVDKII 60
Query: 212 LNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFVWSGDINS 391
+TWK LS+ GRV+MVKSVI S +S VY W +S + L++ I+NF+WSGD +
Sbjct: 61 AKLSTWKASLLSIAGRVQMVKSVIQSMLTHSITVYNWPTSLLKDLEKSIKNFIWSGDTSK 120
Query: 392 THHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKL 511
+VAW K+C ++GGL I+S+ LN A+ LK+ W +
Sbjct: 121 RKLVTVAWKKLCRPFDQGGLRIRSLIQLNSASNLKLCWNI 160
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 134 bits (337), Expect = 1e-29
Identities = 60/133 (45%), Positives = 87/133 (65%)
Frame = +2
Query: 122 GNLPFRYLGVPIFRGKPKAAHMQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALY 301
G+ PF YLGVPIF+GKPKA +Q I+D+IK + WK LS+ GRV+++KSV S ++
Sbjct: 396 GSFPFNYLGVPIFKGKPKARFLQPIVDKIKTKLSNWKASILSIAGRVQLIKSVAQSMLIH 455
Query: 302 SFHVYKWTSSSILSLDRWIRNFVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLND 481
+ +Y W S + L+ RNF+WSGDI +VAW K+C ++GGLGI+S+ LN
Sbjct: 456 TITIYDWPSFLLKELETCFRNFIWSGDITKRKLVTVAWKKLCKPQSQGGLGIRSLSQLNA 515
Query: 482 AAILKMTWKLIQA 520
A LK+ W ++ +
Sbjct: 516 AGNLKLCWDMLHS 528
>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
gi|223537826|gb|EEF39443.1| conserved hypothetical
protein [Ricinus communis]
Length = 303
Score = 116 bits (290), Expect = 4e-24
Identities = 58/173 (33%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNH-NRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHM 187
YG GQ ++++K + S+ R A+ + + + P YLGV F+G PKA +
Sbjct: 93 YGMILGQRVNLDKSEVLLSKSIPLRRALALRFLTVMRLDSFPLVYLGVLNFQGAPKAKWL 152
Query: 188 QSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNF 367
++ +D I + F WKG +L M GR+ ++ SVI +S L++F +Y+W SS + S+++ IRNF
Sbjct: 153 KATMDNILVKFDNWKGRTLFMAGRLALINSVIFASLLHTFMMYRWPSSLLKSIEKAIRNF 212
Query: 368 VWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQS 526
+W+G ++ +V W C ++EGG+G+K + LN + ++ WK S
Sbjct: 213 LWTGSVSYKKLVTVKWGHCCKPISEGGIGLKRLDVLNRTMLCRIAWKFYSNDS 265
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 114 bits (284), Expect = 2e-23
Identities = 60/173 (34%), Positives = 92/173 (53%)
Frame = +2
Query: 2 LEVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAA 181
L+V+ + SG I+++K + N R +A S + G+LP RYLGVP+ K K
Sbjct: 266 LDVFKKGSGLGINLQKTALLLDGGNFERNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKH 325
Query: 182 HMQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIR 361
Q ++DRI F +W LS GR++++KSVI S+ + ++ + + L++
Sbjct: 326 DYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASIFILPNQCLHKLEQMCN 385
Query: 362 NFVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQA 520
F+WSG NS ++WD VC S GGLG+K + S N LK+ W L A
Sbjct: 386 AFLWSGAPNSAREAKISWDIVCSSKESGGLGLKRLSSWNKVLALKLIWLLFTA 438
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 110 bits (276), Expect = 2e-22
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 3/174 (1%)
Frame = +2
Query: 2 LEVYGQ---NSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKP 172
LEV+ + SG IS+EK T+Y + + +A + +G LP RYLG+P+ +
Sbjct: 369 LEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRL 428
Query: 173 KAAHMQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDR 352
+A +L++IK ATW S GR ++KSV+ S + ++ I +D+
Sbjct: 429 TSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPRQCIREIDK 488
Query: 353 WIRNFVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI 514
+F+WSG S+H ++WD VC EGGLG++++K ND + LK+ W++I
Sbjct: 489 LCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRII 542
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 108 bits (270), Expect = 9e-22
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 1/184 (0%)
Frame = +2
Query: 2 LEVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAA 181
L+ + Q SG I+ EK + N R ++AD+ I G+LP RYLGVP+ K +
Sbjct: 719 LDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQ 778
Query: 182 HMQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIR 361
Q ++DRI F +W LS GR++++KSVI S+ + V+ + + + L++
Sbjct: 779 DYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVFIFPNQCLQKLEQMCN 838
Query: 362 NFVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI-QAQSIFGN 538
F+WSG NS ++W+ VC GGLG+K + S N LK+ W L A S++ +
Sbjct: 839 AFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWNRILALKLIWLLFTSAGSLWVS 898
Query: 539 SVRV 550
VR+
Sbjct: 899 WVRL 902
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 108 bits (269), Expect = 1e-21
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 1/180 (0%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
+ + SG IS+ K TIY + + + D +H +G LP RYL +P+ + +
Sbjct: 246 FAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPVRYLCLPLVTKRFTSQDYS 305
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
+L++IK TW LS GR+ +V SV+ S + ++ + +D+ F+
Sbjct: 306 PLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAFRLPRECVREIDKLCSAFL 365
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI-QAQSIFGNSVR 547
WSG ST+ +AW+ VC EGGLG++S+K ND LK+ W+++ Q S++ +R
Sbjct: 366 WSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIR 425
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 107 bits (268), Expect = 1e-21
Identities = 54/171 (31%), Positives = 88/171 (51%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
+ SG IS+EK TIY + + + S+ G LP RYLG+P+ + A
Sbjct: 1025 FAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYS 1084
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
+++ +K ++W SLS GR+ ++ SVI S A + Y+ + I +++ F+
Sbjct: 1085 PLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFL 1144
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQ 523
WSG + + +AW +C EGGLGIKS+ N + LK+ W+L+ Q
Sbjct: 1145 WSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLKLIWRLLSTQ 1195
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 107 bits (268), Expect = 1e-21
Identities = 46/163 (28%), Positives = 94/163 (57%)
Frame = +2
Query: 35 ISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQSILDRIKL 214
IS+EK TI+ + + N +++ + +G LP +YLG+P+ + + ++++I+
Sbjct: 883 ISLEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRA 942
Query: 215 NFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFVWSGDINST 394
+W LS GR++++KSV++S + V++ + + +++ F+WSG +T
Sbjct: 943 RITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPKACLQEIEKMFSAFLWSGPDLNT 1002
Query: 395 HHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQ 523
+AW +VC EGGLG+K +K N+ ++LK+ W+++ A+
Sbjct: 1003 KKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLKLIWRILSAR 1045
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 107 bits (266), Expect = 3e-21
Identities = 54/167 (32%), Positives = 91/167 (54%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
+ + SG S+EK IY H +AD +P+G+LPFRYLGVP+ K + +
Sbjct: 716 FSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCK 775
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
++D+I W H LS GR+++VK+++ S Y ++ I +++ R F+
Sbjct: 776 PLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFL 835
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKL 511
W+G +++++ VAWD + + GGL + +M N AAILK+ W +
Sbjct: 836 WTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILKLLWAI 882
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 106 bits (265), Expect = 3e-21
Identities = 52/170 (30%), Positives = 89/170 (52%)
Frame = +2
Query: 5 EVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAH 184
E + + SG IS+EK T+Y + +H V + +G LP RYLG+P+ + +
Sbjct: 108 ETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPVRYLGLPLVTKQLSSTD 167
Query: 185 MQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRN 364
+++ IK +W LS GR+ ++ SV+ S + ++ I +D+
Sbjct: 168 YLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAFRLPRECIREIDKMCSA 227
Query: 365 FVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI 514
++WSG +T +AW VC +EGGLG++S+K ND + LK+ W++I
Sbjct: 228 YLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRII 277
>gb|ABD28538.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
gi|124360719|gb|ABD33252.2| RNA-directed DNA polymerase
, putative [Medicago truncatula]
Length = 173
Score = 106 bits (264), Expect = 4e-21
Identities = 49/146 (33%), Positives = 83/146 (56%)
Frame = +2
Query: 8 VYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHM 187
+Y S Q++++ K IY +++R++ + + + LPF Y+ F+GKPK H
Sbjct: 20 IYATCSSQMMNLRKSCIYVGGISNSRLNHIVNLSGFTVSTLPFTYIEAS-FKGKPKCIHF 78
Query: 188 QSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNF 367
Q I D+ K A WK LS+ GRV++VKS + S L++ +Y + +++WI+NF
Sbjct: 79 QPIADKFKAKIANWKASLLSIAGRVQLVKSDVQSMLLHTMSIYSCPIKILRDMEKWIKNF 138
Query: 368 VWSGDINSTHHNSVAWDKVCLSVNEG 445
+WSGD+ +VAW K+ + +EG
Sbjct: 139 IWSGDVTKRKMVTVAWKKIYAAYDEG 164
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 105 bits (263), Expect = 6e-21
Identities = 52/170 (30%), Positives = 88/170 (51%)
Frame = +2
Query: 5 EVYGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAH 184
+++ + SG IS+EK TIY + + + + Y +G LP RYLG+P+ + A
Sbjct: 253 DIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATD 312
Query: 185 MQSILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRN 364
+L+ IK TW LS GR+ ++ SV+ S + ++ I +D+
Sbjct: 313 YSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSA 372
Query: 365 FVWSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLI 514
F+WSG + V W VC EGGLG++S+K +N+ + LK+ W+++
Sbjct: 373 FLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLKLIWRIV 422
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 105 bits (262), Expect = 7e-21
Identities = 52/172 (30%), Positives = 89/172 (51%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
+ SG IS+EK T+Y + + + + ++ G LP RYLG+P+ + A
Sbjct: 301 FAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYS 360
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
+LD+++ ++W SLS GR+ ++ SVI S + + Y+ + I +++ F+
Sbjct: 361 PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 420
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQS 526
WSG + + W +C EGGLGIKS+ N + LK+ W+L+ QS
Sbjct: 421 WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQS 472
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 105 bits (262), Expect = 7e-21
Identities = 52/172 (30%), Positives = 88/172 (51%)
Frame = +2
Query: 11 YGQNSGQIISVEKCTIYSSRHNHNRISAVADSYHIPMGNLPFRYLGVPIFRGKPKAAHMQ 190
+ SG IS+EK T+Y + + + + ++ G LP RYLG P+ + A
Sbjct: 870 FAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYS 929
Query: 191 SILDRIKLNFATWKGHSLSMMGRVEMVKSVIASSALYSFHVYKWTSSSILSLDRWIRNFV 370
+LD+++ ++W SLS GR+ ++ SVI S + + Y+ + I +++ F+
Sbjct: 930 PLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFL 989
Query: 371 WSGDINSTHHNSVAWDKVCLSVNEGGLGIKSMKSLNDAAILKMTWKLIQAQS 526
WSG + + W +C EGGLGIKS+ N + LK+ W+L+ QS
Sbjct: 990 WSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLKLIWRLVSRQS 1041