BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00043109
         (605 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                      69   4e-23
gb|AAC02669.1| polyprotein [Arabidopsis thaliana]                      69   4e-23
gb|AAC02664.1| polyprotein [Arabidopsis thaliana]                      69   1e-22
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                       67   1e-22
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]    80   2e-22
gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retr...    69   7e-22
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]               69   9e-22
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...    80   1e-21
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                   80   1e-21
gb|AAB82754.1| retrofit [Oryza longistaminata]                         80   1e-21
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                   78   9e-21
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                     62   3e-20
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                     64   3e-19
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      68   3e-19
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                     64   4e-19
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                     64   4e-19
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                     64   4e-19
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...    64   4e-19
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops...    64   4e-19
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                     64   4e-19

>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 68.6 bits (166), Expect(2) = 4e-23
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS----ALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D  TG  +L+G    E LY     S ++    A    +T L +W +RLGHP L  +KA++
Sbjct: 427 DLSTGARLLQGKTKNE-LYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALI 485

Query: 177 SKHSLPVSS--VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           SK SLP+S    +  +C     NK+HKL F  +TI   HPL+ + +DVW
Sbjct: 486 SKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW 534



 Score = 65.9 bits (159), Expect(2) = 4e-23
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A   S     + +WL DSGAT+H+T+DL NL  H  YN  + +  A GS LPIS++G 
Sbjct: 318 PRANMVSATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGS 377

Query: 367 GILANPTRS 341
            +L  PTRS
Sbjct: 378 ALLPTPTRS 386


>gb|AAC02669.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 68.6 bits (166), Expect(2) = 4e-23
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS----ALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D  TG  +L+G    E LY     S ++    A    +T L +W +RLGHP L  +KA++
Sbjct: 427 DLSTGARLLQGKTKNE-LYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALI 485

Query: 177 SKHSLPVSS--VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           SK SLP+S    +  +C     NK+HKL F  +TI   HPL+ + +DVW
Sbjct: 486 SKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW 534



 Score = 65.9 bits (159), Expect(2) = 4e-23
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A   S     + +WL DSGAT+H+T+DL NL  H  YN  + +  A GS LPIS++G 
Sbjct: 318 PRANMVSATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGS 377

Query: 367 GILANPTRS 341
            +L  PTRS
Sbjct: 378 ALLPTPTRS 386


>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score = 68.6 bits (166), Expect(2) = 1e-22
 Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS----ALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D  TG  +L+G    E LY     S ++    A    +T L +W +RLGHP L  +KA++
Sbjct: 427 DLSTGARLLQGKTKNE-LYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALI 485

Query: 177 SKHSLPVSS--VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           SK SLP+S    +  +C     NK+HKL F  +TI   HPL+ + +DVW
Sbjct: 486 SKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW 534



 Score = 63.9 bits (154), Expect(2) = 1e-22
 Identities = 31/69 (44%), Positives = 42/69 (60%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A   S     + +WL DSGAT+H+T++L NL  H  YN  + +  A GS LPIS++G 
Sbjct: 318 PRANMVSATPYNSGNWLLDSGATHHLTSNLNNLALHQPYNGDEEVTIADGSGLPISHSGS 377

Query: 367 GILANPTRS 341
            +L  PTRS
Sbjct: 378 ALLPTPTRS 386


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score = 67.0 bits (162), Expect(2) = 1e-22
 Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS----ALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D  TG  +L+G    E LY     S ++    A    +T L +W +RLGHP L  +K ++
Sbjct: 427 DLSTGARLLQGKTKNE-LYEWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKTLI 485

Query: 177 SKHSLPVSS--VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           SK SLP+S    +  +C     NK+HKL F  +TI   HPL+ + +DVW
Sbjct: 486 SKFSLPISHSLQNQLLCSDCSINKSHKLPFYSNTIASSHPLEYLYTDVW 534



 Score = 65.5 bits (158), Expect(2) = 1e-22
 Identities = 32/69 (46%), Positives = 42/69 (60%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A   S     + +WL DSGAT+H+T+DL NL  H  YN  + +  A GS LPIS++G 
Sbjct: 318 PRANMVSATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGS 377

Query: 367 GILANPTRS 341
            +L  PTRS
Sbjct: 378 ALLPTPTRS 386


>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
          Length = 1427

 Score = 80.5 bits (197), Expect(2) = 2e-22
 Identities = 46/118 (38%), Positives = 64/118 (54%), Gaps = 11/118 (9%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLY--------TLLPVSPVSALVGERTSLQTWFSRLGHPMLETV 190
           D +TG  + +G  +K+ +Y          L  SP  A V  +TSL  W  RLGHP     
Sbjct: 405 DLKTGARLTQGR-SKDDVYEWPWPNKGNTLGTSPKQACVSVKTSLANWHHRLGHPSSRIF 463

Query: 189 KAIVSKHSL---PVSSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
           + ++ KH+L   P  S H   C+S L NK+HKL F +S++     LDL+ SDVWGP+P
Sbjct: 464 QFLIRKHNLQIYPTESFHNFFCESCLCNKSHKLPFGVSSLRSRGXLDLVYSDVWGPSP 521



 Score = 51.2 bits (121), Expect(2) = 2e-22
 Identities = 27/76 (35%), Positives = 39/76 (51%)
 Frame = -2

Query: 568 RRPTSNAPAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSL 389
           RR     P  +  S  +  + +W+ DSGA++H+T DL NL     Y  PD I    GS L
Sbjct: 289 RRLLQQQPEVHHTSFGNSSSSNWILDSGASHHVTGDLTNLSHQQPYEGPDDILLGDGSGL 348

Query: 388 PISNTGDGILANPTRS 341
            I++TG   L   ++S
Sbjct: 349 EITHTGSSKLPATSKS 364


>gb|AAD14478.1| Strong similarity to gb|AF039376 Evelknievel retrotransposon
           polyprotein from Arabidopsis arenosa [Arabidopsis
           thaliana]
          Length = 1194

 Score = 68.9 bits (167), Expect(2) = 7e-22
 Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS-----ALVGERTSLQTWFSRLGHPMLETVKAI 181
           D +TG  +L+G   K+ LY   PV+P            +T L +W SRLGHP L T+K +
Sbjct: 382 DLKTGVQLLQGR-TKDELYEW-PVNPPKPSSHFTTTTPKTDLTSWHSRLGHPSLSTLKVV 439

Query: 180 VSKHSLPVSS---VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           VS+ SLPVS+     F+ C   L NK HKL F  +TI    PL+ +  D+W
Sbjct: 440 VSQFSLPVSNSLQKQFN-CSDCLLNKTHKLPFHTNTITSTQPLEYLYIDLW 489



 Score = 61.2 bits (147), Expect(2) = 7e-22
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A AA  +     +WL DSGAT+H+T+DL NL  H  Y   + +  A GS L IS+TG 
Sbjct: 273 PRANAAIASPYNANNWLLDSGATHHITSDLNNLSLHQPYTGGEDVTIADGSGLSISHTGS 332

Query: 367 GILANPTRS 341
            +++ P+RS
Sbjct: 333 ALISTPSRS 341


>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
          Length = 1534

 Score = 69.3 bits (168), Expect(2) = 9e-22
 Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 8/111 (7%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPV---SPVSALVGE--RTSLQTWFSRLGHPMLETVKAI 181
           D  TG  +L+G   K+ LY   PV   +P+S       +T+L +W SRLGHP    +K++
Sbjct: 518 DLSTGARLLQGR-TKDELYEW-PVPSNTPISLFASPTPKTTLPSWHSRLGHPSPPVLKSL 575

Query: 180 VSKHSLPVSS---VHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           VS+ SLPVS+    HF  C   L NK+HKL F  +TI+   PL+ + SDVW
Sbjct: 576 VSQFSLPVSNSSQKHFP-CSHCLINKSHKLPFYSNTIISYTPLEYVYSDVW 625



 Score = 60.5 bits (145), Expect(2) = 9e-22
 Identities = 30/74 (40%), Positives = 43/74 (58%)
 Frame = -2

Query: 562 PTSNAPAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPI 383
           P +  P    A+  ++    WL DSGAT+H+T DL NL  H  YN  + +  A GS+LPI
Sbjct: 404 PNATVPWQPRANMAAMSYNPWLLDSGATHHLTTDLNNLALHQPYNGGEEVTIADGSTLPI 463

Query: 382 SNTGDGILANPTRS 341
           ++TG   L+  +RS
Sbjct: 464 THTGSSTLSTQSRS 477


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
           sativa Japonica Group]
          Length = 1448

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVS-----PVSALVGERTSLQTWFSRLGHPMLETVKAI 181
           D+ T +V+L G   + GLY + P S        AL   + SL  W SRLGHP L  VK +
Sbjct: 419 DQVTRDVLLEGKC-RHGLYPI-PKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 180 VSKHSLP--VSSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
           +S+++LP  V SV+ S+C +    K+H+L +  ST V + PL+L+ SDVWGPAP
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 530



 Score = 49.7 bits (117), Expect(2) = 1e-21
 Identities = 24/65 (36%), Positives = 40/65 (61%)
 Frame = -2

Query: 535 AASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGDGILA 356
           AA+++     +W  D+GAT+H+T +L  L T  +YN  + I TA G+ + IS+ G  I+ 
Sbjct: 314 AATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVH 373

Query: 355 NPTRS 341
            P+R+
Sbjct: 374 TPSRN 378


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 7/114 (6%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVS-----PVSALVGERTSLQTWFSRLGHPMLETVKAI 181
           D+ T +V+L G   + GLY + P S        AL   + SL  W SRLGHP L  VK +
Sbjct: 419 DQVTRDVLLEGKC-RHGLYPI-PKSFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQV 476

Query: 180 VSKHSLP--VSSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
           +S+++LP  V SV+ S+C +    K+H+L +  ST V + PL+L+ SDVWGPAP
Sbjct: 477 ISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 530



 Score = 49.7 bits (117), Expect(2) = 1e-21
 Identities = 24/65 (36%), Positives = 40/65 (61%)
 Frame = -2

Query: 535 AASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGDGILA 356
           AA+++     +W  D+GAT+H+T +L  L T  +YN  + I TA G+ + IS+ G  I+ 
Sbjct: 314 AATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVH 373

Query: 355 NPTRS 341
            P+R+
Sbjct: 374 TPSRN 378


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 79.7 bits (195), Expect(2) = 1e-21
 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 6/113 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVS----ALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D+ T +V+L G   + GLY +      S    AL   + SL  W SRLGHP L  VK ++
Sbjct: 415 DQVTRDVLLEGKC-RHGLYPIPKFFGRSTNKQALGAAKLSLSRWHSRLGHPSLPIVKQVI 473

Query: 177 SKHSLP--VSSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
           S+++LP  V SV+ S+C +    K+H+L +  ST V + PL+L+ SDVWGPAP
Sbjct: 474 SRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLELVFSDVWGPAP 526



 Score = 49.7 bits (117), Expect(2) = 1e-21
 Identities = 24/65 (36%), Positives = 40/65 (61%)
 Frame = -2

Query: 535 AASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGDGILA 356
           AA+++     +W  D+GAT+H+T +L  L T  +YN  + I TA G+ + IS+ G  I+ 
Sbjct: 310 AATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVH 369

Query: 355 NPTRS 341
            P+R+
Sbjct: 370 TPSRN 374


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 77.8 bits (190), Expect(2) = 9e-21
 Identities = 46/113 (40%), Positives = 67/113 (59%), Gaps = 6/113 (5%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLP----VSPVSALVGERTSLQTWFSRLGHPMLETVKAIV 178
           D+ T +++L G   + GLY +       +   AL   + SL  W SRLGHP L  VK ++
Sbjct: 416 DQVTKDILLEGRC-RHGLYPIPKSFGRTTSKQALGTTKLSLSRWHSRLGHPSLPIVKQVI 474

Query: 177 SKHSLP--VSSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
           SK++LP  V SV+ S+C +    K+ +L +  ST V + PL+L+ SDVWGPAP
Sbjct: 475 SKNNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLELVFSDVWGPAP 527



 Score = 48.5 bits (114), Expect(2) = 9e-21
 Identities = 24/67 (35%), Positives = 40/67 (59%)
 Frame = -2

Query: 541 AYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGDGI 362
           A AA+++     +W  D+GAT+H+T +L  L T  +YN  + I TA G+ + IS+ G   
Sbjct: 309 AAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYNGNEQIHTASGAGMDISHIGHTT 368

Query: 361 LANPTRS 341
           +  P+R+
Sbjct: 369 VHTPSRN 375


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score = 62.4 bits (150), Expect(2) = 3e-20
 Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -2

Query: 577 TRGRRPTSNAPAAYAASHNSVYTYD-WLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAG 401
           T G  P+  AP    A+  +   ++ W+ DSGAT+H+T+DL NL  H  Y   + +  A 
Sbjct: 288 TNGYSPSPMAPWQPRANIATAPPFNPWVLDSGATHHLTSDLANLSMHQPYTGGEEVTIAD 347

Query: 400 GSSLPISNTGDGILANPTRS 341
           GS LPIS+TG  +L  P+RS
Sbjct: 348 GSGLPISHTGSALLPTPSRS 367



 Score = 62.4 bits (150), Expect(2) = 3e-20
 Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLY---------TLLPVSPVSALVGERTSLQTWFSRLGHPMLET 193
           D  TG  +L+G    E LY         T+L  SP       +T L +W  RLGHP L  
Sbjct: 408 DLNTGARLLQGRTRNE-LYEWPVNQKSITILTASP-----SPKTDLSSWHQRLGHPALPI 461

Query: 192 VKAIVSKHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
           +K +VS   LP+S+       C     NK+HKL F  +TIV   PL+ + +DVW
Sbjct: 462 LKDVVSHFHLPLSNTIPKQLPCSDCSINKSHKLPFFTNTIVSSQPLEYLYTDVW 515


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect(2) = 3e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.4 bits (137), Expect(2) = 3e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 67.8 bits (164), Expect(2) = 3e-19
 Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSA---LVGERTSLQTWFSRLGHPMLETVKAIVS 175
           D+ T   +LRG     GLY L P S  S+   L   + ++  W SRLGHP  + V+ +VS
Sbjct: 409 DQITKNTLLRGPCCN-GLYPL-PASTSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVS 466

Query: 174 KHSLPV--SSVHFSMCQSRLANKNHKLSFPISTIVYEHPLDLIVSDVWGPAP 25
            ++LP    S    +C +    K+H+L F  ST     PL+L+ SDVWGPAP
Sbjct: 467 HNNLPCLGESKELGVCDACQKGKSHQLPFLKSTSASNFPLELVFSDVWGPAP 518



 Score = 53.5 bits (127), Expect(2) = 3e-19
 Identities = 27/70 (38%), Positives = 37/70 (52%)
 Frame = -2

Query: 550 APAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTG 371
           A A+Y    N      W  D+GAT+H+TN+L  L T   YN  + I TA GS + I + G
Sbjct: 305 AAASYGVDSN------WYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMDIKHIG 358

Query: 370 DGILANPTRS 341
              +  PTR+
Sbjct: 359 QSTIRTPTRN 368


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
           polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382


>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
           gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
           transposon [Arabidopsis thaliana]
          Length = 1456

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 404 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHSRLGHPSLAILNSVIS 463

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 464 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 511



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 295 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 354

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 355 ASLPTSSRS 363


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score = 63.9 bits (154), Expect(2) = 4e-19
 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
 Frame = -3

Query: 345 DRQTGEVVLRGMLNKEGLYTLLPVSPVSALVGERTSLQT---WFSRLGHPMLETVKAIVS 175
           D  TG  +L+G    E     +  S   ++     S  T   W SRLGHP L  + +++S
Sbjct: 423 DLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHCSWHSRLGHPSLAILNSVIS 482

Query: 174 KHSLPVSSVHFSM--CQSRLANKNHKLSFPISTIVYEHPLDLIVSDVW 37
            HSLPV +    +  C     NK+HK+ F  STI    PL+ I SDVW
Sbjct: 483 NHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 530



 Score = 57.0 bits (136), Expect(2) = 4e-19
 Identities = 28/69 (40%), Positives = 40/69 (57%)
 Frame = -2

Query: 547 PAAYAASHNSVYTYDWLPDSGATNHMTNDLRNLHTHYEYNVPDHIRTAGGSSLPISNTGD 368
           P A  A ++     +WL DSGAT+H+T+D  NL  H  Y   D +  A GS++PI++TG 
Sbjct: 314 PRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTGS 373

Query: 367 GILANPTRS 341
             L   +RS
Sbjct: 374 ASLPTSSRS 382