BLASTX nr result
ID: Papaver25_contig00042811
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00042811
(464 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein A... 46 2e-10
ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein A... 47 6e-10
ref|XP_003621967.1| Heat shock protein [Medicago truncatula] gi|... 54 2e-09
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A... 42 4e-08
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A... 47 1e-07
ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein A... 46 1e-07
gb|ABN08954.1| Ribonuclease H [Medicago truncatula] 42 1e-07
ref|XP_003618886.1| hypothetical protein MTR_6g025500 [Medicago ... 59 9e-07
gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold ... 40 1e-06
gb|AFK46266.1| unknown [Medicago truncatula] 43 3e-06
ref|XP_003599249.1| hypothetical protein MTR_3g030760 [Medicago ... 56 6e-06
ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein A... 42 6e-06
>ref|XP_004292254.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 45.8 bits (107), Expect(2) = 2e-10
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLAL-VPW 282
GC + LGI N + AEL I+A ++ RG LW+E DS V+ + + + VPW
Sbjct: 69 GCFSGNLGIANALEAELQTVIHAIQMASQRGWHSLWIESDSTLVIHFLSSFQVDVPW 125
Score = 45.4 bits (106), Expect(2) = 2e-10
Identities = 24/51 (47%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 226 LSHMYREGNSVADALSKHGATTAS-HWWYDPPIFIRRALSIDRSVLPLYRF 77
+SH+YREGNS+AD L+ GA A HWW P A S D + P Y F
Sbjct: 145 VSHIYREGNSIADCLANFGADNAGVHWWDSCPPCAITAYSRDLAGFPNYCF 195
>ref|XP_004309966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 197
Score = 47.0 bits (110), Expect(2) = 6e-10
Identities = 25/51 (49%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -2
Query: 226 LSHMYREGNSVADALSKHGATTAS-HWWYDPPIFIRRALSIDRSVLPLYRF 77
+SH+YREGN VAD L+ GA A HWW P A S D + P YRF
Sbjct: 145 VSHIYREGNRVADCLANFGADNAGVHWWDSYPPCAITAYSRDLADFPNYRF 195
Score = 42.4 bits (98), Expect(2) = 6e-10
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = -1
Query: 446 CLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLAL-VPW 282
C + LGI + AEL I+A ++ RG + LW+E DS V+ + + + VPW
Sbjct: 70 CFSGNLGIATALEAELQAVIHAIQMASQRGWRSLWIESDSTLVIHFLSSFQVDVPW 125
>ref|XP_003621967.1| Heat shock protein [Medicago truncatula]
gi|357503391|ref|XP_003621984.1| Heat shock protein
[Medicago truncatula] gi|355496982|gb|AES78185.1| Heat
shock protein [Medicago truncatula]
gi|355496999|gb|AES78202.1| Heat shock protein [Medicago
truncatula]
Length = 553
Score = 53.5 bits (127), Expect(2) = 2e-09
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = -2
Query: 232 CLLSHMYREGNSVADALSKHG-ATTASHWWYDPPIFIRRALSIDRSVLPLYRFI 74
C+++H+YREGN AD L++ G A WW PP+ IR L +R LP YRF+
Sbjct: 402 CMITHIYREGNHCADKLARLGLALDGFLWWNSPPVDIREDLIKNRLGLPFYRFV 455
Score = 34.3 bits (77), Expect(2) = 2e-09
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 404 ELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPW 282
+L G I A R LW+E DS LA+K+ +VPW
Sbjct: 344 KLMGVILAVECAIDRNWNNLWIESDSKLANLAVKSPNIVPW 384
>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 364
Score = 42.0 bits (97), Expect(2) = 4e-08
Identities = 19/34 (55%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHG-ATTASHWWYDPPIFI 125
SH++REGN VADAL+ G + +A WW +PP FI
Sbjct: 327 SHIFREGNQVADALANMGLSMSALSWWDEPPHFI 360
Score = 41.2 bits (95), Expect(2) = 4e-08
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = -1
Query: 464 HNLTRGCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVP 285
H G A L I N + AE+ I A L R + +WLE DS VL +++ LVP
Sbjct: 246 HGSFLGAFASNLEILNSVDAEVMAVIQAIELAWVRDWEHIWLEVDSIIVLNFLQDPHLVP 305
Query: 284 WYTLTG 267
W G
Sbjct: 306 WRLRVG 311
>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 872
Score = 47.4 bits (111), Expect(2) = 1e-07
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHGATTASH-WWYDPPIFIRRALSIDRSVLPLYRF 77
SH++REGN VADAL+ HG + + WW PP FI D +P +RF
Sbjct: 822 SHIFREGNRVADALANHGTSMSEEVWWDVPPSFILSYYERDLLGMPNFRF 871
Score = 34.3 bits (77), Expect(2) = 1e-07
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPW 282
G A + I + I A++ I A L R + +WLE D + VL I++ +LVPW
Sbjct: 746 GAFASHIDIPSSIAAKVMVVITAIELAWVRDWKHVWLEVDFSTVLDYIRSPSLVPW 801
>ref|XP_004304923.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 209
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHGATTASHWWYD-PPIFIRRALSIDRSVLPLYRF 77
SH++REGN VAD ++ G + AS WYD PP + L D +P YRF
Sbjct: 159 SHIFREGNMVADKMANLGLSNASFTWYDNPPTELHGFLQADYLGIPNYRF 208
Score = 35.8 bits (81), Expect(2) = 1e-07
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPWYTL 273
G Q LG Y+EL+ I A + +G LWLE DS V+ + + P + L
Sbjct: 82 GSFCQSLGWKTSFYSELYAVILAIEIAHDKGWVYLWLESDSVSVVACFSSKSFSPPWNL 140
>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
Length = 175
Score = 42.0 bits (97), Expect(2) = 1e-07
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = -2
Query: 232 CLLSHMYREGNSVADALSKHGATTA---SHWWYDPPIFIRRALSID 104
C+ +H++REGN+ AD+L+K+G + A S WW P+F +L ++
Sbjct: 114 CVCTHIHREGNAGADSLAKNGKSLALLTSQWWSSSPLFFFCSLFLE 159
Score = 39.7 bits (91), Expect(2) = 1e-07
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPWYTLT 270
G AQ +G AEL AI+A ++ +WLE DS V+ A + VPW T
Sbjct: 41 GGFAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRT 100
>ref|XP_003618886.1| hypothetical protein MTR_6g025500 [Medicago truncatula]
gi|355493901|gb|AES75104.1| hypothetical protein
MTR_6g025500 [Medicago truncatula]
Length = 143
Score = 58.5 bits (140), Expect = 9e-07
Identities = 31/70 (44%), Positives = 38/70 (54%)
Frame = -1
Query: 446 CLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPWYTLTG 267
C AQ LG N Y E++ I A QS+G LWLE DS V LA+K+ A VPW
Sbjct: 26 CFAQNLGSANSFYTEIFANILAMETAQSKGYIHLWLETDSQLVCLALKSSANVPWVLRNR 85
Query: 266 AIV*SLSPLY 237
+ SL+ LY
Sbjct: 86 CMSSSLARLY 95
>gb|ABD32287.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
truncatula]
Length = 111
Score = 39.7 bits (91), Expect(2) = 1e-06
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHGATTAS--HWWYDP-PIFIRRALSIDRSVLPLYRFI 74
+H+YREGN+ AD+L+ G T +S +W+D P F+R +R +P +R+I
Sbjct: 57 THIYREGNTCADSLANFGLTLSSLDLFWFDTVPDFVRGECIKNRLGMPNFRYI 109
Score = 38.5 bits (88), Expect(2) = 1e-06
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -1
Query: 383 AFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPW 282
A L S G +WL+ DS V+LA K++++VPW
Sbjct: 3 AIELASSMGFFNIWLQSDSQLVILAFKSISIVPW 36
>gb|AFK46266.1| unknown [Medicago truncatula]
Length = 140
Score = 42.7 bits (99), Expect(2) = 3e-06
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHGATTAS--HWWYDP-PIFIRRALSIDRSVLPLYRFI 74
SH+YREGN AD+L+ G + +S +W+D P F+RR + +R +P +RF+
Sbjct: 86 SHIYREGNICADSLANFGLSLSSLDLFWFDSIPDFVRREYNRNRLGMPNFRFV 138
Score = 33.9 bits (76), Expect(2) = 3e-06
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -1
Query: 386 YAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPW 282
+ F + G +WLE DS V+LA K+ ++VPW
Sbjct: 31 FYFEVAALMGYCNVWLESDSQLVILAFKSNSVVPW 65
>ref|XP_003599249.1| hypothetical protein MTR_3g030760 [Medicago truncatula]
gi|355488297|gb|AES69500.1| hypothetical protein
MTR_3g030760 [Medicago truncatula]
Length = 83
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/56 (42%), Positives = 32/56 (57%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPW 282
GC +GI N +YAE++G I A + R LW+E DS LAIK+ +VPW
Sbjct: 25 GCFTFNIGIANAVYAEIFGIILAVKFASERNWNNLWIETDSRLATLAIKSSHIVPW 80
>ref|XP_004308354.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 235
Score = 42.0 bits (97), Expect(2) = 6e-06
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -2
Query: 223 SHMYREGNSVADALSKHGATTASHWWYDPPIF-IRRALSIDRSVLPLYRF 77
SH++REGN VAD ++ G + S WYD P+ + L D +P YRF
Sbjct: 185 SHIFREGNIVADKMANLGLSNVSFTWYDNPLTELHGFLQADYLGIPNYRF 234
Score = 33.5 bits (75), Expect(2) = 6e-06
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -1
Query: 449 GCLAQGLGITNLIYAELWGAIYAFRLEQSRGIQKLWLECDSNFVLLAIKNLALVPWYTL 273
G LG Y+EL+ I A + +G LWLE DS V+ + + P + L
Sbjct: 108 GSFCHSLGWKTSFYSELYVVILAIEIAHDKGWVYLWLESDSVSVVACFSSRSFSPTWNL 166