BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00042093
         (542 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307076.2| pentatricopeptide repeat-containing family p...   177   1e-42
gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis]     175   6e-42
ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prun...   166   3e-39
ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily p...   166   4e-39
ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containi...   166   4e-39
gb|EYU19328.1| hypothetical protein MIMGU_mgv1a025271mg [Mimulus...   159   4e-37
ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
ref|XP_002866898.1| pentatricopeptide repeat-containing protein ...   147   2e-33
emb|CBI26593.3| unnamed protein product [Vitis vinifera]              147   2e-33
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi...   146   3e-33
ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Caps...   143   3e-32
ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutr...   139   3e-31
ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutr...   139   4e-31
ref|NP_680777.2| pentatricopeptide repeat-containing protein [Ar...   139   4e-31
gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlise...   139   6e-31
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi...   137   2e-30
ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...   125   7e-27
ref|XP_004491447.1| PREDICTED: pentatricopeptide repeat-containi...   124   2e-26
ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [S...   115   5e-24

>ref|XP_002307076.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550338333|gb|EEE94072.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 744

 Score =  177 bits (449), Expect = 1e-42
 Identities = 92/170 (54%), Positives = 118/170 (69%)
 Frame = +2

Query: 32  TNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           +N+L   ID FLS+ +  +++L K H+ IIT+G+ NN+FI+SKLISLY+S  KP+ S+ V
Sbjct: 28  SNYLNCHIDSFLSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYV 87

Query: 212 FSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSD 391
           F S N  KDTFLWNSIIKSHFS GNY  + + + +M + + PPN FTIPMIV   AEL  
Sbjct: 88  FDSTN-QKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLW 146

Query: 392 IEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           +E G+ IH    K GL   N A+GSSFVYMY KC  + DA  MFDE+ VR
Sbjct: 147 LEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVR 196



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/142 (26%), Positives = 77/142 (54%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H +II +    ++ I + LI +Y      +++ ++F      +D   WN++I S+   G+
Sbjct: 425 HCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFC--RTQRDVVTWNTLISSYTHSGH 482

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           Y  ++  F +M    + PN  T+ ++++A   L  +E G+++H + +K G    NV++G+
Sbjct: 483 YAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVHQY-IKEGGFELNVSLGT 541

Query: 467 SFVYMYCKCNELGDAENMFDEM 532
           + V MY KC +L  +  +F+ M
Sbjct: 542 ALVDMYAKCGQLEQSRELFNSM 563


>gb|EXB29469.1| hypothetical protein L484_022141 [Morus notabilis]
          Length = 778

 Score =  175 bits (444), Expect = 6e-42
 Identities = 89/173 (51%), Positives = 122/173 (70%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           S   N+L + +  FLS+ +  +++L+K H+ IITSG+ NNIFI SKLISLY+SLN+P  S
Sbjct: 23  STSPNYLNDQLSLFLSAKTSTLQSLLKSHALIITSGNSNNIFIASKLISLYASLNRPTNS 82

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           + VF S +  KDTFLWNS+IK+HFS G++  +L  F +M  S   PN FT+PM+V + A+
Sbjct: 83  TLVFYSIH-PKDTFLWNSVIKAHFSNGDFQEALYLFLRMRASGFVPNQFTLPMVVGSCAD 141

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           L  ++ G+  H   LK GLL G+   GSSFVYMYCKC ++GDA  +FDE+TVR
Sbjct: 142 LMLLDCGKSFHGLVLKLGLLSGDNVAGSSFVYMYCKCGQMGDAYKVFDEITVR 194



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 38/143 (26%), Positives = 76/143 (53%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H ++I +   NN+ + + LI +Y    +  ++ ++F      KD   WN+II  +   G 
Sbjct: 459 HCYVIKNFIDNNVSVANSLIDMYGKRGELTLAWRMFC--RAQKDVVTWNTIISCYIHCGQ 516

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           +  ++  F KM   ++ PN  T+ M+++  + L+ ++ G  +H   +K   L  N+++G+
Sbjct: 517 FEEAIALFDKMISENLYPNSATLAMVLSTCSHLASLDKGEKVH-HHIKERGLEINLSLGT 575

Query: 467 SFVYMYCKCNELGDAENMFDEMT 535
           + V MY KC +L  +  +F+ MT
Sbjct: 576 ALVDMYAKCGQLEQSRGLFNSMT 598



 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/150 (24%), Positives = 74/150 (49%), Gaps = 1/150 (0%)
 Frame = +2

Query: 77  SIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNG-DKDTFLWN 253
           S+ +K    +H+ II   +     + + L+ +YS     N++ ++FS      K++   +
Sbjct: 348 SMFVKPGKAFHALIIRRDYLLGEMVHNSLLFMYSKFGLLNIAEKLFSKMRQWTKESC--S 405

Query: 254 SIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKF 433
           ++I  +   G+    +E F +MH   +  N  ++  ++++  +L     GR +HC+ +K 
Sbjct: 406 TMISGYSKIGHSAKCIELFREMHLLGVEVNSDSLVSVISSCCQLGATRLGRSLHCYVIK- 464

Query: 434 GLLRGNVAIGSSFVYMYCKCNELGDAENMF 523
             +  NV++ +S + MY K  EL  A  MF
Sbjct: 465 NFIDNNVSVANSLIDMYGKRGELTLAWRMF 494


>ref|XP_007207635.1| hypothetical protein PRUPE_ppa021864mg [Prunus persica]
           gi|462403277|gb|EMJ08834.1| hypothetical protein
           PRUPE_ppa021864mg [Prunus persica]
          Length = 748

 Score =  166 bits (421), Expect = 3e-39
 Identities = 85/170 (50%), Positives = 115/170 (67%)
 Frame = +2

Query: 32  TNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           +N+L   +  FLS+ + +++ L + H+ I+TSG+ NNIFI +KLIS Y+SL+KP  S++V
Sbjct: 27  SNYLNCQLHSFLSNQNSNLQYLSQSHALIVTSGNANNIFIAAKLISFYASLSKPTFSTKV 86

Query: 212 FSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSD 391
           F S    KDTFLWNSIIK+HFS G+Y  +L+ F +M      P  FT+PM+V + AEL  
Sbjct: 87  FGSVC-PKDTFLWNSIIKTHFSNGDYSKALDFFFQMRALGFAPTQFTLPMVVASCAELML 145

Query: 392 IEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           +E G  +H   LK GL  GN A+GSSFVYMY KC  + DA  MF+E TVR
Sbjct: 146 LEHGNNVHGLALKLGLFSGNSAVGSSFVYMYSKCGRMEDAYFMFEETTVR 195



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 38/145 (26%), Positives = 72/145 (49%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H ++I      NI + + L+ +Y       ++ ++FS     +D   WN++I S+   G+
Sbjct: 429 HCYLIKVSMDENISVANSLLDMYGKSGHLKIARRIFSGTQ--RDIITWNTMISSYTHAGH 486

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
              ++  F KM   +  PN  T+  +++A + L+ +  G  IH   +K   L  N+++ +
Sbjct: 487 SAEAIALFEKMIAVNFKPNSATLVTVLSACSHLASLGEGEKIHSH-IKERRLEINLSLAT 545

Query: 467 SFVYMYCKCNELGDAENMFDEMTVR 541
           + V MY KC +L  +  +FD M  R
Sbjct: 546 ALVDMYAKCGQLEKSRELFDSMEER 570


>ref|XP_007047919.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
           [Theobroma cacao] gi|508700180|gb|EOX92076.1|
           Pentatricopeptide repeat (PPR) superfamily protein,
           putative [Theobroma cacao]
          Length = 784

 Score =  166 bits (419), Expect = 4e-39
 Identities = 90/174 (51%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
 Frame = +2

Query: 32  TNHLTNLIDQFLSS--FSIDIKTLVKYHSFIITSGHR-NNIFITSKLISLYSSLNKPNVS 202
           + +L   +  FLS+   S  +++L++ H+ IIT+G+  NNIFI SKLISLY+  NKP+ S
Sbjct: 26  SGYLNCQLHSFLSNNPSSSTLQSLLQSHALIITTGNSTNNIFIASKLISLYAFFNKPHFS 85

Query: 203 SQVFSSFN-GDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASA 379
           ++VF S +   KDTFLWNSIIKSHFS GNY  S E+  KM   + PPN FTIPM+ +A A
Sbjct: 86  TKVFDSLSIPAKDTFLWNSIIKSHFSNGNYAESFEYHLKMRLHNTPPNDFTIPMVASACA 145

Query: 380 ELSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           EL     G+ +H   LKFGL   N A+GSSFVYMY KC  +GDA  +FDE+ V+
Sbjct: 146 ELRWEGCGKYVHGLTLKFGLFAENSAVGSSFVYMYAKCGSMGDACLVFDEIIVK 199



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/142 (24%), Positives = 75/142 (52%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H  I+ S   +NI I + LI +Y       ++ ++F+     +D   WN+++ ++   G+
Sbjct: 465 HCNIVKSYMVDNITIANSLIDMYGKNGNLTIAWRIFNQTQ--RDIITWNTMMSAYTRCGH 522

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           +  ++  F +M   ++ PN  T+  +++A + L+  E G IIHC+  + G      ++ +
Sbjct: 523 FSEAIALFDQMISGNLTPNLATLLTVLSACSHLASWEKGEIIHCYIKEEGYELCQ-SLAT 581

Query: 467 SFVYMYCKCNELGDAENMFDEM 532
           + + MY KC +L ++  +F+ M
Sbjct: 582 ALIDMYAKCGQLENSRELFNSM 603


>ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  166 bits (419), Expect = 4e-39
 Identities = 87/173 (50%), Positives = 115/173 (66%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           SH+ N   N ++  LS+    +KTL++ H+FIITSG+ NNIFI SKLISLY+S +KP+ S
Sbjct: 28  SHEPNDF-NYLNHLLSNQISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCS 86

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           +++F      +D FLWNSIIK+HFS G Y  +L+ +  M  S   PN FTIPMIV + AE
Sbjct: 87  TELFDEIP-HRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAE 145

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           L  + +GR IH    K GL  G+ A+GSSFVYMY KC  L +A  +FDE+  R
Sbjct: 146 LELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFR 198



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 35/145 (24%), Positives = 74/145 (51%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H ++I +    N+ + + LI +Y       ++ ++F      +D   WN++I S+   G+
Sbjct: 425 HCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRI--PRDIVTWNTLISSYAHCGH 482

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           +  +L  + KM    + PN  T+  +++A + L+ +E G  +H + +  G    N++I +
Sbjct: 483 FAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNY-INGGKFEFNLSIAT 541

Query: 467 SFVYMYCKCNELGDAENMFDEMTVR 541
           + + MY KC +L  +  +F+ M  R
Sbjct: 542 ALIDMYAKCGQLEKSREIFNSMHER 566


>gb|EYU19328.1| hypothetical protein MIMGU_mgv1a025271mg [Mimulus guttatus]
          Length = 715

 Score =  159 bits (402), Expect = 4e-37
 Identities = 78/154 (50%), Positives = 108/154 (70%)
 Frame = +2

Query: 80  IDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSI 259
           + + TL+  H++IIT+GH +N F+ SKLI+ Y++LN+ + +++VF  F   KDTFLWNSI
Sbjct: 8   VKLTTLLSTHAYIITTGHAHNRFLASKLIASYAALNQLDSATRVFD-FLAVKDTFLWNSI 66

Query: 260 IKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGL 439
           IK+HFS GNY  +++ FS+M      PN FTIPM+V+A AEL  +  G  IHC   K  L
Sbjct: 67  IKAHFSNGNYAEAVDFFSEMRVFGALPNQFTIPMVVSACAELGSVCIGLQIHCLVSKLNL 126

Query: 440 LRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
             GN A+G+SFVYMY KC ++ DA ++FDEM VR
Sbjct: 127 FHGNSAVGASFVYMYSKCGDVEDACHVFDEMPVR 160



 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 40/140 (28%), Positives = 76/140 (54%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H  ++ +    N+ + + LIS+Y       V+ ++F  +N   D   WNS+I S+   G 
Sbjct: 394 HCHVVRNLMLQNVSVANSLISMYGKCRSLTVAQRLF--YNTKPDIATWNSLISSYNDNGE 451

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           Y+++L  F KM    +  N  T+  +++A   ++ +E GR IH + ++ G ++  V++ +
Sbjct: 452 YLDALNLFDKMISQGVKANTATLLSLLSACTHIASLENGRKIHNYIIEEG-IKYEVSVAT 510

Query: 467 SFVYMYCKCNELGDAENMFD 526
           S V MY KC ++  A+ +FD
Sbjct: 511 SLVDMYAKCGQIETAKEIFD 530


>ref|XP_006353228.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Solanum tuberosum]
          Length = 761

 Score =  154 bits (390), Expect = 1e-35
 Identities = 84/170 (49%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
 Frame = +2

Query: 38  HLTNLIDQFLS--SFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           +L + I+ FLS   FS ++K+L++ H+FIIT+GH +N++I +KLISLY+S N    S +V
Sbjct: 8   NLHHKINTFLSINGFSSNLKSLLQSHAFIITTGHTHNVYIAAKLISLYASNNNLISSRKV 67

Query: 212 FSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSD 391
           F   N  KD FLWNSIIK++FS G Y  SLE +S M  S+  PN FTIPM+V+A AEL  
Sbjct: 68  FDFINF-KDPFLWNSIIKAYFSNGKYTESLELYSSMRGSNALPNQFTIPMVVSACAELGL 126

Query: 392 IEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           +E G  +H   LK  L  GN A+G+S V+MY KC  +  A ++FDE+ VR
Sbjct: 127 VEIGMGVHGLVLKLNLFDGNSAVGASLVFMYSKCGVMEYASDVFDEIPVR 176



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H  +I +    N+ +++ LI +Y       +S +VF     DKD   WN+++ S  S G 
Sbjct: 441 HCHVIKNLMLGNVSVSNSLIDMYGRSKNLTLSWRVFCMMT-DKDVVTWNTMMTSSISCGK 499

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCF--GLKFGLLRGNVAI 460
              +   F +M   S  PN  T+ ++++AS+++S +E G  +H +   ++FG    N  +
Sbjct: 500 IAEAFGLFDEMRAESYKPNIATLVILLSASSQVSSLEKGEKVHQYIKEVEFG---KNTLL 556

Query: 461 GSSFVYMYCKCNELGDAENMFDEM 532
            ++   MY KC +L  +  +FD M
Sbjct: 557 DTALTDMYAKCGQLTKSREIFDSM 580



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 32/144 (22%), Positives = 76/144 (52%)
 Frame = +2

Query: 104 YHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGG 283
           +H FI+   +  +  +++ L+++Y  L   N++ ++F+  NG ++T  WN +   ++  G
Sbjct: 339 FHGFILRRNYDEDHMVSNTLLAMYCKLRLLNLAEKIFNRGNG-QNTEAWNVMAIGYWKDG 397

Query: 284 NYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIG 463
                ++ F  M +  +  +  ++  ++++ + L  +  G+ +HC  +K  L+ GNV++ 
Sbjct: 398 LEAKCIDLFRDMQYLGVESDVNSLISVISSCSRLEKLRLGQSLHCHVIK-NLMLGNVSVS 456

Query: 464 SSFVYMYCKCNELGDAENMFDEMT 535
           +S + MY +   L  +  +F  MT
Sbjct: 457 NSLIDMYGRSKNLTLSWRVFCMMT 480


>ref|XP_002866898.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312734|gb|EFH43157.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 742

 Score =  147 bits (370), Expect = 2e-33
 Identities = 80/173 (46%), Positives = 107/173 (61%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           S  ++++   I   L   S+ +++L K+++ IIT G+  NIF+ SKLIS Y+S  KPN+S
Sbjct: 24  SSSSSYVDRHISVILCDQSLSLESLRKHNALIITGGNSENIFVASKLISSYASYGKPNLS 83

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           S+VF      +D FLWNSIIK+HFS G+Y  SL  F  M  S   P+ FT PM+V+A AE
Sbjct: 84  SRVFDLVTR-RDVFLWNSIIKAHFSNGDYARSLGFFFSMLLSGQSPDHFTAPMVVSACAE 142

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           L   + G  +H F LK G    N A+G+SFVY Y KC  L DA  +FDEM  R
Sbjct: 143 LLWFDVGSFVHGFVLKHGGFERNTAVGASFVYFYSKCGFLQDACLVFDEMPER 195



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN--GDKDTFLWNSIIKSHFSG 280
           H F + +G  ++  + S + SLYS    P   ++ + SF   GD+D F W SII S    
Sbjct: 258 HGFAVKNGLASSNVVQSSIFSLYSKSGNP---AEAYLSFRELGDQDMFSWTSIIASLVRS 314

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLK--FGLLRGNV 454
           GN   S + F +M    + P+   I  +++   +   +  G+  H F ++  F L   + 
Sbjct: 315 GNVEESFDMFWEMQNKGMQPDGIVISCLISELGKKMLVPEGKAFHGFVIRHCFSL---DS 371

Query: 455 AIGSSFVYMYCKCNELGDAENMF 523
            + +S + MYCK   L  AE +F
Sbjct: 372 TVCNSLLSMYCKFEFLSVAEKLF 394


>emb|CBI26593.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score =  147 bits (370), Expect = 2e-33
 Identities = 79/167 (47%), Positives = 106/167 (63%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           SH+ N   N ++  LS+    +KTL++ H+FIITSG+ NNIFI SKLISLY+S +KP+ S
Sbjct: 28  SHEPNDF-NYLNHLLSNQISSLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCS 86

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           +++F      +D FLWNSIIK+HFS G Y  +L+ +  M  S   PN FTIPMIV + AE
Sbjct: 87  TELFDEIP-HRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAE 145

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMF 523
           L  + +GR IH    K GL  GN  + ++ + MYCK   L  AE  F
Sbjct: 146 LELVNYGRSIHGLVSKLGLFSGNQMVQNALLSMYCKFGFLKLAEKFF 192


>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  146 bits (369), Expect = 3e-33
 Identities = 76/173 (43%), Positives = 107/173 (61%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           SH  N   N +  F S  ++  ++L+++HS IIT+G+ NN+F  +KL++ Y+   KP  S
Sbjct: 35  SHYPN---NCLHSFFSKPNLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFS 91

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           + +F   +  KD FLWNSII+SHFS G+Y  + + + +M  SS  PN FT+PM+V+  AE
Sbjct: 92  THLFRLIHS-KDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAE 150

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           L     G  IH    K GL  GN AIGSSF+YMY KC  +  A  MF E+TV+
Sbjct: 151 LMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVK 203



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 40/169 (23%), Positives = 78/169 (46%)
 Frame = +2

Query: 35  NHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVF 214
           N L ++I       +I+I   +  H + I +    N+ + + L+ +Y        + ++F
Sbjct: 442 NSLVSVISSCSQVGAINIGRSI--HCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIF 499

Query: 215 SSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDI 394
                 +D   WN++I S+   G    ++  F KM    + PN  T  ++++A A L+ +
Sbjct: 500 HR-TLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASL 558

Query: 395 EFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           + G  IH + +K      N+ I ++ + MY KC EL  +  +F+    R
Sbjct: 559 DEGEKIHQY-IKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEER 606


>ref|XP_006283167.1| hypothetical protein CARUB_v10004198mg [Capsella rubella]
           gi|482551872|gb|EOA16065.1| hypothetical protein
           CARUB_v10004198mg [Capsella rubella]
          Length = 771

 Score =  143 bits (360), Expect = 3e-32
 Identities = 79/171 (46%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
 Frame = +2

Query: 32  TNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           ++++   I   L   S+ +++L K  + IIT G+ +NIF+ SKLIS Y+S  KPN+SS+V
Sbjct: 16  SSYVDRHISVILCDQSLCLESLRKLTALIITGGNSDNIFVASKLISSYASHGKPNLSSRV 75

Query: 212 FSSFNGDK-DTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELS 388
           F   +  + D FLWNSIIK+HFS G+Y  +L  F  M FS   P+ FT PM+V+ASAEL 
Sbjct: 76  FDLVSSRRRDVFLWNSIIKAHFSNGDYERTLGIFFSMLFSGHSPDHFTAPMVVSASAELF 135

Query: 389 DIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
             + G  +H   LK G    N A+G+SFVY Y KC  L DA ++FDEM  R
Sbjct: 136 WFDVGSFLHGLVLKHGRFDRNTAVGASFVYFYSKCGFLDDACHVFDEMPER 186



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN--GDKDTFLWNSIIKSHFSG 280
           H F +  G  ++  + S + SLYS   K  + ++ + SF   GD+D F W SII S    
Sbjct: 249 HGFTVKYGLASSKIVLSSVFSLYS---KSGIPAEAYLSFRELGDEDMFSWTSIIASLARS 305

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLK--FGLLRGNV 454
           GN   S + F +M      P+   I  ++    ++  +  G+  H F ++  F L   + 
Sbjct: 306 GNIKESFDMFWEMQNKGTQPDGVVISCLINELGKMMLVSQGKAFHGFVVRRCFSL---DA 362

Query: 455 AIGSSFVYMYCKCNELGDAENMF 523
            + +S + MYCK   L  AE +F
Sbjct: 363 TVCNSLLSMYCKLELLSAAEKVF 385



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/140 (24%), Positives = 67/140 (47%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H + + +     I + + LI LY  +    V+ ++F     D +   WN++I S+     
Sbjct: 452 HCYAVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE--ADTNIVTWNAMIASYVHCEQ 509

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
              ++  F KM + ++ P+  T+  ++ A A    +E G+IIH + +       NV++ +
Sbjct: 510 PEKAMALFDKMIYENLKPSSITLVTLLMACASTGSLERGQIIHSY-ITETEHEMNVSLST 568

Query: 467 SFVYMYCKCNELGDAENMFD 526
           + + MY KC  L  +  +FD
Sbjct: 569 ALIDMYAKCGHLEKSRELFD 588


>ref|XP_006404950.1| hypothetical protein EUTSA_v10000054mg [Eutrema salsugineum]
           gi|557106078|gb|ESQ46403.1| hypothetical protein
           EUTSA_v10000054mg [Eutrema salsugineum]
          Length = 779

 Score =  139 bits (351), Expect = 3e-31
 Identities = 76/170 (44%), Positives = 106/170 (62%), Gaps = 4/170 (2%)
 Frame = +2

Query: 44  TNLIDQFLSSFSID----IKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           ++ ID+ +S    D    +++L K+++ IIT G+ +N+F+ SKLIS Y+S  KPN+SS+V
Sbjct: 26  SSYIDRHISVILCDKLSTLESLRKHNALIITGGNSDNVFVASKLISSYASFGKPNISSKV 85

Query: 212 FSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSD 391
           F   +  +D FLWNSIIK+HFS  +Y  +L+ F  M  S   P+ FT PM+V+A AELS 
Sbjct: 86  FDLVS-QRDVFLWNSIIKAHFSNADYPRALDFFFSMLLSGQSPDHFTAPMVVSACAELSW 144

Query: 392 IEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
            + G  +H    K G    N A G+SFVY Y KC  L DA  +FDEM  R
Sbjct: 145 YDVGSFVHGLVSKHGGFERNSAAGASFVYFYAKCGRLEDACLVFDEMPER 194



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 3/142 (2%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN--GDKDTFLWNSIIKSHFSG 280
           H F + +G  ++  + S   SLY+    P   ++ + SF   GD+D F W SII S    
Sbjct: 257 HGFTVKNGLASSNIVKSSTFSLYTKCGNP---AEAYLSFRELGDEDIFSWTSIIASMARS 313

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGL-LRGNVA 457
           GN   S + F +M    I P+   I  ++    ++  +  G+  H F ++    L G V 
Sbjct: 314 GNIEESFDMFWEMQRKGIQPDGVVISCLINELGKMMLVYEGKAFHGFVIRHCFSLDGTVC 373

Query: 458 IGSSFVYMYCKCNELGDAENMF 523
             +S + MYCK   L  AE +F
Sbjct: 374 --NSLLSMYCKFELLPVAEKLF 393



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
 Frame = +2

Query: 128 GHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEH 307
           G   N    +  +  Y+   +   +  VF     ++D   W +II  H   G     LE+
Sbjct: 160 GFERNSAAGASFVYFYAKCGRLEDACLVFDEMP-ERDVVAWTAIISGHVQNGESERGLEY 218

Query: 308 FSKMH---FSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVY 478
             KMH        PNP T+     A A LS ++ GR +H F +K GL   N+   S+F  
Sbjct: 219 LCKMHSVGSDDEKPNPRTLECGFQACANLSALKQGRCLHGFTVKNGLASSNIVKSSTF-S 277

Query: 479 MYCKCNELGDAENMFDEM 532
           +Y KC    +A   F E+
Sbjct: 278 LYTKCGNPAEAYLSFREL 295



 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/103 (28%), Positives = 53/103 (51%)
 Frame = +2

Query: 98  VKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFS 277
           +K H +I  + H  N+ +T+ LI +Y+   +   S Q+F + N  KDT  WN +I  +  
Sbjct: 557 LKIHRYITETEHEMNLSLTTALIDMYAKCGQLEKSRQLFDAAN-QKDTVCWNVMISGYGM 615

Query: 278 GGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGR 406
            GN  +++E F +M  + + P   T   +++A      +E G+
Sbjct: 616 HGNVESAIELFDQMEEADVEPTGTTFLALLSACTHAGLVEQGK 658


>ref|XP_006390828.1| hypothetical protein EUTSA_v10018157mg [Eutrema salsugineum]
           gi|557087262|gb|ESQ28114.1| hypothetical protein
           EUTSA_v10018157mg [Eutrema salsugineum]
          Length = 776

 Score =  139 bits (350), Expect = 4e-31
 Identities = 76/170 (44%), Positives = 107/170 (62%), Gaps = 4/170 (2%)
 Frame = +2

Query: 44  TNLIDQFLSSFSID----IKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQV 211
           ++ ID+ +S    D    +++L ++++  IT G+ +NIF+ SKLIS Y+S  KPN+SS V
Sbjct: 25  SSYIDRHISVILCDKVSSLESLRRHNALTITGGNSDNIFVASKLISSYASYGKPNLSSTV 84

Query: 212 FSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSD 391
           F S +  +D FLWNSIIK+HFS G+Y  +L  F  M  S   P+ FT+PM+V+A AELS 
Sbjct: 85  FDSVSR-RDVFLWNSIIKAHFSNGDYPRALGFFFSMLLSCQSPDHFTVPMVVSACAELSW 143

Query: 392 IEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           +  G  +H   LK G    + A+G+SFVY Y KC  L D   +FDEM  R
Sbjct: 144 LGVGSFVHGLALKHGGFDRSCAVGASFVYFYAKCGRLEDVCLVFDEMPER 193



 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 3/142 (2%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN--GDKDTFLWNSIIKSHFSG 280
           H   + +G  ++  + S + SLYS    P   ++ + SF   GDKD F W SII S    
Sbjct: 256 HGLSVKNGLDSSNIVKSSIFSLYSKSENP---TEAYLSFRDLGDKDMFSWTSIIASLARS 312

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGL-LRGNVA 457
           GN   S + F +M    I P+   I  +     ++  +  G+  H F ++    L G V 
Sbjct: 313 GNMEKSFDMFWEMQRKGIQPDGVVISCLSNELGKMMRVAEGKAFHGFIIRHCFTLDGTVC 372

Query: 458 IGSSFVYMYCKCNELGDAENMF 523
              S + MYCK   L  AE +F
Sbjct: 373 --DSLLSMYCKFELLSVAEKLF 392



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/140 (25%), Positives = 68/140 (48%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H +++ +       + + LI LY  +    V+ +VF    G K+T  WN++I S+     
Sbjct: 457 HCYVVKTSLDLTTSVVNSLIDLYGKMGDLTVAWRVFRE--GHKNTVTWNAMIASYVHCEQ 514

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           +  ++E F KM   S  P+  T+  ++ A A    +E G+ IH +  +      N+++ +
Sbjct: 515 FDKAIELFDKMISESFKPSSITLVTVLMACANTGSLERGQKIHQYITETEHSM-NLSLTT 573

Query: 467 SFVYMYCKCNELGDAENMFD 526
           + + MY KC  L  +  +F+
Sbjct: 574 ALIDMYAKCGRLEKSRELFN 593



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/102 (31%), Positives = 54/102 (52%)
 Frame = +2

Query: 101 KYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSG 280
           K H +I  + H  N+ +T+ LI +Y+   +   S ++F++ N  KDT  WN +I  +   
Sbjct: 555 KIHQYITETEHSMNLSLTTALIDMYAKCGRLEKSRELFNAAN-QKDTVCWNVMITGYGMH 613

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGR 406
           GN  ++LE F +M  S I P   T   +++A A    +E G+
Sbjct: 614 GNVESALELFQQMEESGIKPTGSTFLALLSACAHAGLVEQGK 655


>ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
           gi|332661744|gb|AEE87144.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  139 bits (350), Expect = 4e-31
 Identities = 79/173 (45%), Positives = 103/173 (59%)
 Frame = +2

Query: 23  SHQTNHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVS 202
           S   +++   I   L   S+ +++L K+++ IIT G   NIF+ SKLIS Y+S  KPN+S
Sbjct: 19  SSSASYVDRHISVILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLS 78

Query: 203 SQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAE 382
           S+VF      +D FLWNSIIK+HFS G+Y  SL  F  M  S   P+ FT PM+V+A AE
Sbjct: 79  SRVFHLVTR-RDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAE 137

Query: 383 LSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           L     G  +H   LK G    N A+G+SFVY Y KC  L DA  +FDEM  R
Sbjct: 138 LLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 4/143 (2%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN--GDKDTFLWNSIIKSHFSG 280
           H F + +G  ++ F+ S + S YS    P   S+ + SF   GD+D F W SII S    
Sbjct: 253 HGFAVKNGLASSKFVQSSMFSFYSKSGNP---SEAYLSFRELGDEDMFSWTSIIASLARS 309

Query: 281 GNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLK--FGLLRGNV 454
           G+   S + F +M    + P+   I  ++    ++  +  G+  H F ++  F L   + 
Sbjct: 310 GDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSL---DS 366

Query: 455 AIGSSFVYMYCKCNELGDAENMF 523
            + +S + MYCK   L  AE +F
Sbjct: 367 TVCNSLLSMYCKFELLSVAEKLF 389


>gb|EPS72647.1| hypothetical protein M569_02111, partial [Genlisea aurea]
          Length = 409

 Score =  139 bits (349), Expect = 6e-31
 Identities = 72/151 (47%), Positives = 96/151 (63%), Gaps = 1/151 (0%)
 Frame = +2

Query: 83  DIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSII 262
           ++ TL+  H++ I  GH  N FI SKLI  Y+SL  P  S+++F S +  KD FLWNSII
Sbjct: 1   NLPTLLSAHAYTIVKGHAQNRFIASKLILSYASLGHPVCSTKIFVSVHF-KDLFLWNSII 59

Query: 263 KSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLL 442
           K+HFS GNY  ++E FS+M F +  P+ FT+PM+V+ASAEL  +  G  IHCF  K  L 
Sbjct: 60  KAHFSAGNYAEAIEFFSQMRFLAFSPDEFTLPMVVSASAELGSLFLGMCIHCFIAKANLF 119

Query: 443 RGN-VAIGSSFVYMYCKCNELGDAENMFDEM 532
             N  AIG+S VYMY KC  +  +   F E+
Sbjct: 120 YANSAAIGASLVYMYSKCEAIESSALAFGEI 150


>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  137 bits (345), Expect = 2e-30
 Identities = 69/146 (47%), Positives = 93/146 (63%)
 Frame = +2

Query: 104 YHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGG 283
           +HS IIT+G+ NN+F  +KL++ Y+   KP  S+ +F   +  KD FLWNSII+SHFS G
Sbjct: 29  FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHS-KDIFLWNSIIQSHFSNG 87

Query: 284 NYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIG 463
           +Y  + + + +M  SS  PN FT+PM+V+  AEL     G  IH    K GL  GN AIG
Sbjct: 88  DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 147

Query: 464 SSFVYMYCKCNELGDAENMFDEMTVR 541
           SSF+YMY KC  +  A  MF E+TV+
Sbjct: 148 SSFIYMYSKCGHVESASIMFSEITVK 173



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 40/169 (23%), Positives = 78/169 (46%)
 Frame = +2

Query: 35  NHLTNLIDQFLSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVF 214
           N L ++I       +I+I   +  H + I +    N+ + + L+ +Y        + ++F
Sbjct: 412 NSLVSVISSCSQVGAINIGRSI--HCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIF 469

Query: 215 SSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDI 394
                 +D   WN++I S+   G    ++  F KM    + PN  T  ++++A A L+ +
Sbjct: 470 HR-TLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASL 528

Query: 395 EFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
           + G  IH + +K      N+ I ++ + MY KC EL  +  +F+    R
Sbjct: 529 DEGEKIHQY-IKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEER 576


>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  125 bits (314), Expect = 7e-27
 Identities = 66/159 (41%), Positives = 94/159 (59%)
 Frame = +2

Query: 65  LSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTF 244
           LS     +++L+ +H+  +T+G+  N FI +KLISLY +LN P  SS +F S    KDTF
Sbjct: 17  LSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPF-KDTF 75

Query: 245 LWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFG 424
           LWNS +K+ FS   Y   L  +S M   ++ PN FT PM+ ++ A    I  G  +H   
Sbjct: 76  LWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALA 135

Query: 425 LKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
            K G    N A+GSSFV +Y +C+E+ DA  +FDE+ VR
Sbjct: 136 CKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVR 174



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 41/142 (28%), Positives = 76/142 (53%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H  +I       I +T+ LI +Y   +K NVS ++F+    ++D  LWN++I +H    +
Sbjct: 438 HCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFN--RSERDVILWNALISAHIHVKH 495

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGS 466
           Y  ++  F  M      PN  T+ ++++A + L+ +E G  +H +  + G  + N+ +G+
Sbjct: 496 YEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKG-FKLNLPLGT 554

Query: 467 SFVYMYCKCNELGDAENMFDEM 532
           + V MY KC +L  +  +FD M
Sbjct: 555 ALVDMYAKCGQLEKSREVFDSM 576



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
 Frame = +2

Query: 50  LIDQFLSSF--SIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSF 223
           +I   LS F  S+D+     +H  II   +  +  + + L+S+Y      + + ++F   
Sbjct: 317 VIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRS 376

Query: 224 NGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFG 403
            G  +   WN +I  +   G  V  ++ F +M +  I      I   + +  +L +I  G
Sbjct: 377 QGSIE--YWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLG 434

Query: 404 RIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFD 526
           R IHC  +K G +   +++ +S + MY KC+++  +  +F+
Sbjct: 435 RSIHCNVIK-GFVDETISVTNSLIEMYGKCDKMNVSWRIFN 474


>ref|XP_004491447.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502099305|ref|XP_004491448.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 760

 Score =  124 bits (310), Expect = 2e-26
 Identities = 64/159 (40%), Positives = 98/159 (61%)
 Frame = +2

Query: 65  LSSFSIDIKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTF 244
           LS     +++L+++H+  +T+G+  N FI +KLISLY +LN P+ SS +F S    KDTF
Sbjct: 19  LSKRITTVESLLQFHAVTVTTGNSTNPFIAAKLISLYDTLNHPSSSSTLFHSLPF-KDTF 77

Query: 245 LWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGRIIHCFG 424
           LWNS +K+ FS   +   L  +S M  S++ PN FT P++ ++ A L  +  G  +H   
Sbjct: 78  LWNSFLKTLFSRSLFPQLLSFYSLMRSSNLLPNQFTFPIVASSYAHLLLLPSGMNLHALA 137

Query: 425 LKFGLLRGNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
            K GL   + A+GSSFV +Y +C ++ DA  +FDE+ VR
Sbjct: 138 SKLGLFPSSSAVGSSFVSLYSRCGQMNDAVKVFDEIPVR 176



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
 Frame = +2

Query: 107 HSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGN 286
           H  +I       I +T+ LI +Y   NK  V+ ++F+    ++D   WN++I +H    +
Sbjct: 440 HCNVIKGFVDETISVTNSLIEMYGKCNKMTVAWRIFNG--SEQDVTSWNTLISAHIHVKH 497

Query: 287 YVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFG-RIIHCFGLKFGLLRGNVAIG 463
           +  ++  F+KM      PN  T+ ++++A + L+ +E G R+ H    K   L  N+ +G
Sbjct: 498 HEEAINLFNKMIMEDQNPNTATLVVVLSACSHLASLEKGERVQHYINEKSFKL--NLPLG 555

Query: 464 SSFVYMYCKCNELGDAENMFDEM 532
           ++ + MY KC +L  +  +FD M
Sbjct: 556 TALIDMYAKCGQLEKSRKVFDSM 578


>ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  115 bits (289), Expect = 5e-24
 Identities = 65/167 (38%), Positives = 100/167 (59%), Gaps = 3/167 (1%)
 Frame = +2

Query: 50  LIDQFLSSFSID-IKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN 226
           L+ +FL+S S   +  L++ H+   TSG  +     +KL+S YSS   P  ++  FS+ +
Sbjct: 15  LLYRFLASPSPPPLIALLRLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSA-S 73

Query: 227 GDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGR 406
              DTFLWNS+++SH    ++ ++L    +M  S   P+ FT P+  +A+AEL+ +  G 
Sbjct: 74  PCPDTFLWNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGT 133

Query: 407 IIHCFGLKFGLLR--GNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
            +H + +KFGLL   G+VA+ SS VYMY +C  LGDA  +FDEM  R
Sbjct: 134 SVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVER 180



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 39/131 (29%), Positives = 70/131 (53%)
 Frame = +2

Query: 149 ITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFS 328
           IT+ LI +Y       ++ ++F+     +D   WN++I S+   G   ++L  + +M   
Sbjct: 462 ITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTE 521

Query: 329 SIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGD 508
            + PN  T+  +++A A L+ +E G ++H +    G L  +V+I ++ V MY KC +LG 
Sbjct: 522 DVKPNSSTLITVISACANLAALEHGELLHSYVKNMG-LESDVSISTALVDMYTKCGQLGT 580

Query: 509 AENMFDEMTVR 541
           A  +FD M  R
Sbjct: 581 ARGIFDSMLQR 591


>ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
           gi|241939160|gb|EES12305.1| hypothetical protein
           SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  115 bits (289), Expect = 5e-24
 Identities = 63/168 (37%), Positives = 102/168 (60%), Gaps = 4/168 (2%)
 Frame = +2

Query: 50  LIDQFLSSFSID-IKTLVKYHSFIITSGHRNNIFITSKLISLYSSLNKPNVSSQVFSSFN 226
           ++ +FLSS S   +  L++ H+  +TSG      I +KL+S YSS  +P +++  FS+  
Sbjct: 12  VLSRFLSSPSPSPVPELLRVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACP 71

Query: 227 GDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFSSIPPNPFTIPMIVTASAELSDIEFGR 406
              D FLWNS+I++H    ++V +L    +M  SS  P+PFT+P+  +A+AEL  +  G 
Sbjct: 72  RP-DAFLWNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGA 130

Query: 407 IIHCFGLKFGLLR---GNVAIGSSFVYMYCKCNELGDAENMFDEMTVR 541
            +H + +++GLL    G+VA+ SS VYMY +C  + DA  +F+EM  R
Sbjct: 131 SVHAYCVRYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRER 178



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 35/128 (27%), Positives = 65/128 (50%)
 Frame = +2

Query: 149 ITSKLISLYSSLNKPNVSSQVFSSFNGDKDTFLWNSIIKSHFSGGNYVNSLEHFSKMHFS 328
           + + LI +Y    K + + ++F       D   WN++I S+   G+   ++  + +M   
Sbjct: 461 VANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTE 520

Query: 329 SIPPNPFTIPMIVTASAELSDIEFGRIIHCFGLKFGLLRGNVAIGSSFVYMYCKCNELGD 508
            + PN  T+  +++A A L  +E G  IH +  + G    +V+I ++ + MY KC +LG 
Sbjct: 521 GLTPNSTTLITVISACANLVALERGEKIHSYVKEMG-WDYDVSINTALIDMYAKCGQLGT 579

Query: 509 AENMFDEM 532
           A  +FD M
Sbjct: 580 ARRIFDSM 587