BLASTX nr result

ID: Papaver25_contig00041870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00041870
         (461 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    77   3e-12
ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    63   4e-08
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597...    57   2e-06
ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein A...    55   8e-06

>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 43/154 (27%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
 Frame = +2

Query: 8   PTLSMQYWKIWASQCCATDDNVMKKTGRSMPSMCRICKKDGETMRHIIWQCRFSRRIWAW 187
           P +S+  WK+   +  + D  ++++ G ++ S C +C +DGE++ HI   C F+  +W  
Sbjct: 44  PRISLHSWKVLRGRVLSED--LLQRRGIALASRCVLCGRDGESLPHIFLTCSFAASLWNN 101

Query: 188 ASGIFNM----QPMEDLLDSYKVAKGRSRMIKDLWLVTHLAIATELWKLRNKIYFEEATV 355
            +G+F +    Q + DLL  Y    GRS  +K++WL+ +      +WK RNK+  +  T+
Sbjct: 102 RAGLFELGCLPQNLVDLL--YYGGVGRSHQLKEIWLICYTTTLWFIWKARNKMRHDNCTI 159

Query: 356 NWLSFKGRVYQLIHDNSIRMKGFMFNKEDDLRIL 457
              + +  +   +   S    G M N   +LR+L
Sbjct: 160 VVDAVRQLIMGHVKTASKLALGCMSNSLTELRVL 193


>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 872

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
 Frame = +2

Query: 8   PTLSMQYWKIWASQCCATDDNVMKKTGRSMPSMCRICKKDGETMRHIIWQCRFSRRIWAW 187
           P +S+  WK+      +   +++++ G ++ S C  C    E++ HI   C F+  +W  
Sbjct: 538 PRMSLHAWKVMRGTVISY--HLLQRRGVALVSRCEFCGNSTESLDHIFLHCSFAASVWNH 595

Query: 188 ASGIFNMQPMEDLLD---SYKVAKGRSRMIKDLWLVTHLAIATELWKLRNKIYFEEATVN 358
              IF +  + + +    S  +A  RS  +K+LWL+   +I   +W  RN+I F+  T +
Sbjct: 596 FIYIFEIGLVPNTIAEVFSLGLAMDRSPQLKELWLICFTSILWYIWHARNQIRFDSRTFS 655

Query: 359 WLSFKGRVYQLIHDNSIRMKGFMFNKEDDLRIL 457
                  V + I  +S    G M N   DL IL
Sbjct: 656 VAGVCRLVSRHIQASSRLATGHMHNTIHDLCIL 688


>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
          Length = 305

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
 Frame = +2

Query: 47  QCCATDDNVMKKTGRSMPSMCRICKKDGETMRHIIWQCRFSRRIWAW---ASGIFNMQPM 217
           + C T DN+ KK     P+ C +CKK+ ET RH++  C  +  +W+     SGI    P+
Sbjct: 162 EACLTQDNI-KKRKIQFPNRCYMCKKEAETPRHLLLHCEVASELWSMFFCLSGINWTTPL 220

Query: 218 --EDLLDSYKVAKGRSRMIKDLWLVTHLAIATELWKLRNKIYFE 343
             +D  +S+ + K   + IK +W++    I   +W  RNK  F+
Sbjct: 221 TVKDAYESWSLWK-VDKAIKKIWIMIPACIFWSIWLERNKRCFD 263


>ref|XP_004308214.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 409

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
 Frame = +2

Query: 8   PTLSMQYWKIWASQCCATDDNVMKKTGRSMPSMCRICKKDGET-MRHIIWQCRFSRRIWA 184
           P +S+  WK+   +  + D  ++++ G  + S C +C +D E+   HI   C F   +W 
Sbjct: 75  PRISLHSWKVLRGRVLSED--LLQRRGIVLASRCVLCGRDCESSFPHIFLTCSFVASLWN 132

Query: 185 WASGIFNMQPM-EDLLDS-YKVAKGRSRMIKDLWLVTHLAIATELWKLRNKIYFEEATVN 358
             + +F +  + ++L+D  Y    GRS  +K++WL+ +      + K RNKI  +  T+ 
Sbjct: 133 NWACLFELGSLPQNLVDLIYYGGVGRSHQLKEIWLICYTTTLWFIGKARNKIRHDNCTI- 191

Query: 359 WLSFKGRVYQLIHDN----SIRMKGFMFNKEDDLRIL 457
                  V+QLI  +    S    G M N    LR+L
Sbjct: 192 ---VVDAVHQLIMGHVKAVSKLASGCMSNSLTKLRVL 225


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