BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00041711
         (700 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein A...    71   4e-10
ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, part...    66   1e-08
ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein A...    65   2e-08
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    62   2e-07

>ref|XP_004309110.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 872

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 4/229 (1%)
 Frame = +3

Query: 9    KSAKAVIRTPSEVQPSAALFTRPVVHPTLSVQYLKIWTEQCCASEDNIIKKTGKSMPTMC 188
            K A   ++  S V P         + P +S+   K+      +   +++++ G ++ + C
Sbjct: 512  KQAFLFLQQASPVVPWGKPLWSKFILPRMSLHAWKVMRGTVISY--HLLQRRGVALVSRC 569

Query: 189  SLCRKSCETISHITCHCRVAKRIWA*AASIFNLHPNEDLVA---SYKDAKERR-MIKDLW 356
              C  S E++ HI  HC  A  +W     IF +    + +A   S   A +R   +K+LW
Sbjct: 570  EFCGNSTESLDHIFLHCSFAASVWNHFIYIFEIGLVPNTIAEVFSLGLAMDRSPQLKELW 629

Query: 357  MVANLTIVS*L*KLCNKAYFEDMAVQWLCFKGRVYQVILDNSIKMKGHTYNNVEELRILN 536
            ++   +I+  +    N+  F+            V + I  +S    GH +N + +L IL 
Sbjct: 630  LICFTSILWYIWHARNQIRFDSRTFSVAGVCRLVSRHIQASSRLATGHMHNTIHDLCILK 689

Query: 537  YFKVQHRSYKISTPIEVSWNPPNQDEIIICCDGASLGNPGQAGAGVTFR 683
             F    RS +I   +EV W+PP+   I I  DGA     G  G G  FR
Sbjct: 690  SFGACCRSRRIPRMVEVIWHPPSIGWIKINSDGAWKHEEGIGGFGAVFR 738


>ref|XP_007213453.1| hypothetical protein PRUPE_ppa024777mg, partial [Prunus persica]
           gi|462409318|gb|EMJ14652.1| hypothetical protein
           PRUPE_ppa024777mg, partial [Prunus persica]
          Length = 465

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 4/163 (2%)
 Frame = +3

Query: 210 ETISHITCHCRVAKRIWA*AASIFNLH----PNEDLVASYKDAKERRMIKDLWMVANLTI 377
           E I+H+   C     IW+    +F LH    P   +++S   A     + DLW++   TI
Sbjct: 175 ENINHLFSECPFTCSIWSSMFIVFGLHFTSGPLAVILSSGLSAHFSPQLMDLWLLMFRTI 234

Query: 378 VS*L*KLCNKAYFEDMAVQWLCFKGRVYQVILDNSIKMKGHTYNNVEELRILNYFKVQHR 557
           V  +  L NK  FE+           +   +  +S   +GH  N V +L I+    V +R
Sbjct: 235 VWLIWDLRNKLRFEEKVSTVSSNCRTIINHVPASSPLARGHILNKVHDLCIIRSIGVHYR 294

Query: 558 SYKISTPIEVSWNPPNQDEIIICCDGASLGNPGQAGAGVTFRD 686
               S  +EV+W+PP    + I  DGA   + G+AG+G  FR+
Sbjct: 295 PRPNSKIVEVTWHPPCFGFVKIKIDGACKRDSGKAGSGGVFRN 337


>ref|XP_004309472.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 364

 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 45/184 (24%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
 Frame = +3

Query: 144 DNIIKKTGKSMPTMCSLCRKSCETISHITCHCRVAKRIWA*AASIFNLH---PNEDLVAS 314
           ++++++ G ++ + C LC +  E++ HI   C  A  +W   A +F L     N   +  
Sbjct: 61  EDLLQRRGIALASRCVLCGRDGESLPHIFLTCSFAASLWNNRAGLFELGCLPQNLVDLLY 120

Query: 315 YKDAKERRMIKDLWMVANLTIVS*L*KLCNKAYFEDMAVQWLCFKGRVYQVILDNSIKMK 494
           Y        +K++W++   T +  + K  NK   ++  +     +  +   +   S    
Sbjct: 121 YGGVGRSHQLKEIWLICYTTTLWFIWKARNKMRHDNCTIVVDAVRQLIMGHVKTASKLAL 180

Query: 495 GHTYNNVEELRILNYFKVQHRSYKISTPIEVSWNPPNQDEIIICCDGASLGNPGQAGAGV 674
           G   N++ ELR+L  F +  R ++     EV+W+PP    I +  DGA     G++G G 
Sbjct: 181 GCMSNSLTELRVLKKFGLLCRPHRAPRITEVNWHPPLFGWIKVNTDGAWQKTTGKSGYGG 240

Query: 675 TFRD 686
            FRD
Sbjct: 241 IFRD 244


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 43/185 (23%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
 Frame = +3

Query: 138 SEDNIIKKTGKSMPTMCSLCRKSCETISHITCHCRVAKRIWA*AASIFNLHPNEDLVASY 317
           ++DN+ K+    +   C  CRK  ET SHI   C V  ++W       + H +   + + 
Sbjct: 98  TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKATDQHLDFSSILNI 157

Query: 318 KDAKERRMIKDLWMVANLTIVS*L*KLCNKAYFEDMAVQWLCFKGRVYQVILDNSIKM-- 491
                 RM++ +   A + I+  +   CN  YF+ +          +   +L  S  +  
Sbjct: 158 S-----RMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDI 212

Query: 492 -KGHTYNNVEELRILNYFKVQHRSYKISTPIEVSWNPPNQDEIIICCDGASLGNPGQAGA 668
            KG +  ++++ ++   F +  ++ +++   E+ W PP+   + I CDG+ +G+P     
Sbjct: 213 VKGAS--SMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSI 270

Query: 669 GVTFR 683
           GV FR
Sbjct: 271 GVIFR 275