BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00041539
         (771 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A...   114   5e-23
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A...   102   2e-19
ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein A...   102   2e-19
gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Ze...    99   1e-18
gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japo...    99   2e-18
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              99   2e-18
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              98   3e-18
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              98   3e-18
ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, part...    97   6e-18
ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, part...    97   8e-18
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   1e-17
ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Caps...    94   4e-17
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    94   5e-17
ref|XP_006296178.1| hypothetical protein CARUB_v10025338mg [Caps...    93   9e-17
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    93   9e-17
ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein A...    92   2e-16
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    92   2e-16
ref|XP_002461212.1| hypothetical protein SORBIDRAFT_02g042875 [S...    92   2e-16
ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein A...    91   5e-16
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun...    91   5e-16

>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 786

 Score =  114 bits (284), Expect = 5e-23
 Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 10/247 (4%)
 Frame = +1

Query: 7    PLKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVK 186
            P  V +LID  TH+W L  + N +  E  D+IR IP+ E    +DR +W  SK+G+ +VK
Sbjct: 399  PQLVDSLIDWDTHTWRLDGVANVLSREAEDRIRCIPIGE-EDGNDRLLWPWSKNGSFTVK 457

Query: 187  ACYNWLQQQQHVISSSSMVP---------QWRSLWRLKCPSHIKHFLWLLAHXXXXXXXX 339
            + Y+WL QQ  + +S  ++           WR LW +     +K F W +          
Sbjct: 458  SGYHWLHQQSSMNASPLVITGTSHRVGKKMWRLLWGMPTLPKVKLFFWQVMGGVGPNFSN 517

Query: 340  XXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQT 519
                 +    MCPLC  EDET  HL L C  V PIW        I  +  TM   W + +
Sbjct: 518  LYKRKLTSSPMCPLCGLEDETFEHLLLLCSWVSPIWFGSPMGLRIDKQQITMVDSWFINS 577

Query: 520  IND-GGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDL 696
             +   G   +     +   I W IW  R + ++   P   ++ +  A N A EF      
Sbjct: 578  YSSIVGTKQKEFFLTMSSMICWMIWKARCNYLYKGIPVSPQSTLHLAINLAMEFMEAKAT 637

Query: 697  NCRTMDT 717
              +T D+
Sbjct: 638  QLQTTDS 644


>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
            italica]
          Length = 950

 Score =  102 bits (254), Expect = 2e-19
 Identities = 76/268 (28%), Positives = 117/268 (43%), Gaps = 15/268 (5%)
 Frame = +1

Query: 13   KVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKAC 192
            KV  LIDP T +W+   +      E +  I +IP+      DD   W H + G  SV++ 
Sbjct: 534  KVEELIDPITGTWDSQLVREIFWEEDVPNILSIPVRIGR--DDVIAWHHDRKGMFSVRSA 591

Query: 193  YNWL-----QQQQHVISSSSM--------VPQWRSLWRLKCPSHIKHFLWLLAHXXXXXX 333
            Y+ L     +Q+++    SS+          +W+ LW+L CP  ++HF+W LAH      
Sbjct: 592  YHMLVDEERRQRKYQQGESSVCCREGDHETQKWKKLWKLPCPPKVRHFIWRLAHNSLPLK 651

Query: 334  XXXXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVY-NIPIRDSTMSLDWI 510
                  G+ + T CP+C R DE   H FL C+ +   W  L      + +  S  S D++
Sbjct: 652  QNIKRRGVFLDTRCPVCMRFDEDGGHCFLKCKLIKRCWRILEMEQTRLALLSSKSSKDFV 711

Query: 511  LQTINDGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRIL 690
               +       E  L   V  +LWK W  RN  V +  P      I    ++  E + +L
Sbjct: 712  WNVL-----QLEQSLACKVSLLLWKWWDVRNK-VNAGDPI---QNIQNVCHSVLEMAGLL 762

Query: 691  DLNCRTMDTTAHPVQ-WFPPPNSCIKLN 771
            +L    +  TA   Q W  PP   +K+N
Sbjct: 763  ELPTIKIRPTARLQQRWLRPPQGVLKIN 790


>ref|XP_004292563.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 504

 Score =  102 bits (253), Expect = 2e-19
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 7/262 (2%)
 Frame = +1

Query: 7   PLKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVK 186
           P  V + ID     WN +A+++ +  + + +I  IP+ +   LD   +W  +K G  +V+
Sbjct: 117 PSSVGSFIDWDLRGWNTTAIDHVIHPQDIQRIVDIPIGDGEVLDCF-LWPWNKIGVYTVR 175

Query: 187 ACYNW------LQQQQHVISSSSMVPQ-WRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXX 345
           + Y+W      + +   + SS    P+ W+ LW +K    ++ FLW + H          
Sbjct: 176 SGYHWYHTSMSIPRAPSIGSSHQFDPKIWKILWSIKTLPKVRIFLWRVLHGAAPTMHSLH 235

Query: 346 XXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTIN 525
              +    +CP+C + +ET  HL L C  V PIW        I  R  T    W++   N
Sbjct: 236 KRKIVSNPLCPVCGKTEETFEHLLLLCHWVNPIWFGSPLGIRIDKRKITTFDRWLISIYN 295

Query: 526 DGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNCR 705
              +     +  L+  I W IW  R   V+ +R       I  A N A EF R    + R
Sbjct: 296 HCPSSEREAVLTLISTICWAIWKERCHFVYQHREVSPPFTIRAARNLALEF-RHASASMR 354

Query: 706 TMDTTAHPVQWFPPPNSCIKLN 771
                   +QW PPP    K+N
Sbjct: 355 NSRVPRLHMQWLPPPFGHHKIN 376


>gb|AEJ07916.1| putative ZmL1 non-LTR retrotransposon protein [Zea mays]
          Length = 472

 Score = 99.4 bits (246), Expect = 1e-18
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 9/262 (3%)
 Frame = +1

Query: 13  KVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKAC 192
           KVA LIDP T SW+   + +    E  D I AIP+ E   ++D   W     G  SVK+ 
Sbjct: 66  KVAELIDPITGSWDCRLVRDTFLQEDADCILAIPIQEG--MEDTLAWHGDPKGNFSVKSA 123

Query: 193 YNWLQQQQ----HVISSSSMVPQ----WRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXX 348
           Y    +++    +  +SSS+  +    W+S+W +   + IK FLW LAH           
Sbjct: 124 YALASRRRDHHNNADASSSISGRGENVWKSIWNVNVTNKIKMFLWRLAHNSHPVRVNIAR 183

Query: 349 XGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTIND 528
            G+ I T+CP+C R DE   HLFL C+KV  +W  L       +  S  S   ++++I  
Sbjct: 184 RGIKIETLCPMCFRLDEDGGHLFLKCKKVKQVWRCLCLEDTRTLLASKASALEVIESILT 243

Query: 529 GGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRI-LDLNCR 705
              +     ++ V  +LW  W  RN  +   R    + +  T         ++ +  + R
Sbjct: 244 LREET----KIKVVLLLWCWWSARNKTIQGERCGSTEEVCNTVAYHLMNMEKLQIGKSAR 299

Query: 706 TMDTTAHPVQWFPPPNSCIKLN 771
                   ++W PPP    K+N
Sbjct: 300 APPMN---LKWQPPPAGFYKIN 318


>gb|EAZ40370.1| hypothetical protein OsJ_24816 [Oryza sativa Japonica Group]
          Length = 613

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 75/265 (28%), Positives = 110/265 (41%), Gaps = 12/265 (4%)
 Frame = +1

Query: 13  KVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKAC 192
           KVA LI+P T  W+   +++    E +  I AIP+   +   D   W     G  SVK+ 
Sbjct: 203 KVADLINPITGEWDRELIQDIFWEEDVKNILAIPVH--NGYSDVAAWHFDPRGIFSVKSA 260

Query: 193 YNWLQQQQHVIS-----------SSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXX 339
           Y+ L+ Q+   +           +SS   QW  LWRL     +KHFLW LAH        
Sbjct: 261 YHTLEYQRDRQAIRQTGESSSGKTSSAALQWEKLWRLNHLPKVKHFLWRLAHNSLPLRQN 320

Query: 340 XXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVY-NIPIRDSTMSLDWILQ 516
               GM I T CP+C R DE   H F  C+ V P W  L++ +    +   T +LD    
Sbjct: 321 ISKRGMEIDTRCPVCLRLDENGGHCFFKCKFVKPCWRMLNFEHIRQELSLQTSTLDVCKH 380

Query: 517 TINDGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDL 696
            +N      ++ L  ++  +LW  W  RN +         + +        +E S +   
Sbjct: 381 ILN---LREDIMLTTVI--LLWNWWDARNKVNAGEDRRTHEEVYSRVIRMVSENSLLFRD 435

Query: 697 NCRTMDTTAHPVQWFPPPNSCIKLN 771
             R     +    W PPP   +KLN
Sbjct: 436 KAR--GNPSSQSTWCPPPQCVLKLN 458


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 67/255 (26%), Positives = 100/255 (39%), Gaps = 1/255 (0%)
 Frame = +1

Query: 10   LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
            +KV  LI  Q   W+  AL N +P   +D +RA P+A  S+ +D   W HS  G V+V +
Sbjct: 964  IKVEDLITSQRR-WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSS 1022

Query: 190  CYNWLQQQQHVISSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPT 369
             Y+ +               W  +WR  C   IK F+W +              G+    
Sbjct: 1023 AYSLIAGHD----GDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAA 1076

Query: 370  MCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTINDGGADN-E 546
             CP+C  EDET+ HLF  C      W +          +      W+    +    D   
Sbjct: 1077 SCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYS 1136

Query: 547  VCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNCRTMDTTAH 726
                ++ P+ILW +W  RN LVF        +++  +F  ++E   +L            
Sbjct: 1137 TNWSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTAFQT 1196

Query: 727  PVQWFPPPNSCIKLN 771
             V W PP     KLN
Sbjct: 1197 WVVWSPPAAGFTKLN 1211


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 69/258 (26%), Positives = 102/258 (39%), Gaps = 4/258 (1%)
 Frame = +1

Query: 10   LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
            +KV  L   Q   W+  AL N +PI  +D +RA P+A  S+ +D   W HS  G V+V +
Sbjct: 1496 IKVEDLTTSQRR-WDTGALHNILPINMIDMVRATPIAINSEQEDFPSWPHSTTGMVTVSS 1554

Query: 190  CYNWLQQQQHVISSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPT 369
             Y+ +               W  +WR  C   IK F+W +              G+    
Sbjct: 1555 AYSLIAGHD----GDGRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAA 1608

Query: 370  MCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTIN----DGGA 537
             CP+C  EDET+ HLF  C      W +          +      W+    +    DG  
Sbjct: 1609 SCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYG 1668

Query: 538  DNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNCRTMDT 717
             N     ++ P+ILW +W  RN LVF        +++  +F  ++E   +L         
Sbjct: 1669 TN---WSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTA 1725

Query: 718  TAHPVQWFPPPNSCIKLN 771
                V W PP     KLN
Sbjct: 1726 FQTWVVWSPPAAGFTKLN 1743


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 69/258 (26%), Positives = 102/258 (39%), Gaps = 4/258 (1%)
 Frame = +1

Query: 10   LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
            +KV  LI  Q   W+  AL N +P   +D +RA P+A  S+ +D   W HS  G V+V +
Sbjct: 964  IKVEDLITSQRR-WDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTGMVTVSS 1022

Query: 190  CYNWLQQQQHVISSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPT 369
             Y+ +               W  +WR  C   IK F+W +              G+    
Sbjct: 1023 AYSLIAGHD----GDDRSHDW--IWRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAA 1076

Query: 370  MCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTIN----DGGA 537
             CP+C  EDET+ HLF  C      W +          +      W+    +    DG  
Sbjct: 1077 SCPVCGEEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGYG 1136

Query: 538  DNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNCRTMDT 717
             N     ++ P+ILW +W  RN LVF        +++  +F  ++E   +L         
Sbjct: 1137 TN---WSLIFPYILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTA 1193

Query: 718  TAHPVQWFPPPNSCIKLN 771
                V W PP     KLN
Sbjct: 1194 FQTWVVWSPPAAGFTKLN 1211


>ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
           gi|462415876|gb|EMJ20613.1| hypothetical protein
           PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 97.1 bits (240), Expect = 6e-18
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
 Frame = +1

Query: 7   PLKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVK 186
           P+ +  +++    SW+LS +   +  ET+  I ++P+   S L DR +W  + +G  SVK
Sbjct: 162 PIFLEEIMNKLERSWDLSRVSLFLDQETIRCILSLPIGI-SSLPDRWIWPWTSNGEYSVK 220

Query: 187 ACYNWLQQQQHVISSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIP 366
           +      Q  HV+S+      W+ LW+LK    IK F W +               ++  
Sbjct: 221 SGIVGPPQTSHVVSTQV----WKGLWKLKSLPKIKFFCWRILSNAIATKLNLFKRKISQS 276

Query: 367 TMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWI--LQTINDGGAD 540
            MCP+C+  +E++ HLFL C     +W      Y +  +  T   +W+  +  +N     
Sbjct: 277 PMCPVCENNEESVEHLFLLCPWTAAVWFGSPLNYRVHNQSITTFDNWLNSMFQLNLTSIL 336

Query: 541 NEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEF--SRILDLNCRTMD 714
           +   L  ++ FILW+IW  R   V   R     +++  A  AA EF  + +         
Sbjct: 337 DRNRLMTIISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEFIEANVSQSTHSDYV 396

Query: 715 TTAHPVQWFPPPNSCIKLN 771
           T      W PP +  +K+N
Sbjct: 397 TLISTRAWTPPSDGFVKVN 415


>ref|XP_006285450.1| hypothetical protein CARUB_v10006875mg, partial [Capsella rubella]
           gi|482554155|gb|EOA18348.1| hypothetical protein
           CARUB_v10006875mg, partial [Capsella rubella]
          Length = 438

 Score = 96.7 bits (239), Expect = 8e-18
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 20/274 (7%)
 Frame = +1

Query: 10  LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
           L V  LIDP T  W+   L   +       I+ I L +   +DD  +WS++KDG  SVK+
Sbjct: 21  LPVRILIDPHTFHWDSHQLHRYIDTHDHHLIQKIFLPQVPMVDDY-LWSYTKDGEYSVKS 79

Query: 190 CYNW----LQQQQHV-ISSSSMVPQWRS-LWRLKCPSHIKHFLWLLAHXXXXXXXXXXXX 351
            Y W    LQ+++H  ++  +  P   S +W+L     +KHFLW LA             
Sbjct: 80  GY-WKALSLQREEHAPVAPLATSPDIASTIWQLNIAPKLKHFLWRLASRAIGVADNLRRR 138

Query: 352 GMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLD----WILQT 519
            +NI   C  C  + E+  H+F +C +V+PIW  +     + + D  +SL+    ++ + 
Sbjct: 139 NININPYCSWCCSDFESSEHIFFTCPRVHPIWRMVGVPLTL-LGDPNISLEDKLRYLFRL 197

Query: 520 INDGGADNEVCLEVLVPF-ILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDL 696
            ND         +   PF +LW++W  RN+LVF+ +    + +         E+   L  
Sbjct: 198 HNDSSLP---IFKRTSPFLVLWRLWKTRNNLVFNRKSTTTEEVFKYICLDTEEWLNHLTP 254

Query: 697 NCRTMDTTAHPV---------QWFPPPNSCIKLN 771
           +     TT+ P+         +W PP    +K N
Sbjct: 255 HAPITTTTSKPLSYHAPTRRSKWTPPCQGWVKCN 288


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 19/273 (6%)
 Frame = +1

Query: 10   LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
            LKV  LID    +WN+ +++     E  + + +IPL+ +   DD R W  S++G  SV++
Sbjct: 962  LKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLP-DDHRYWWPSRNGIFSVRS 1020

Query: 190  CYNWL--------QQQQHVISSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXX 345
            CY WL         Q QH    + +   WR +W+L+ P  + HFLW              
Sbjct: 1021 CY-WLGRLGPVRTWQLQHGERETEL---WRRVWQLQGPPKLSHFLWRACKGSLAVKGRLF 1076

Query: 346  XXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAA---LSYVYNIPIRDSTMSLDWILQ 516
               +++   C +C   DE+I+H    C     IW      S + N P+   +  L+W+ +
Sbjct: 1077 SRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASLMMNAPLSSFSERLEWLAK 1136

Query: 517  TINDGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDL 696
                  A  E     +  F +W  W CRN L+F       +N +  A   A  FS+++  
Sbjct: 1137 -----HATKEE-FRTMCSF-MWAGWFCRNKLIF-------ENELSDAPLVAKRFSKLVAD 1182

Query: 697  NCRTMDTT--------AHPVQWFPPPNSCIKLN 771
             C    +              W PPP    K+N
Sbjct: 1183 YCEYAGSVFRGSGGGCGSSALWSPPPTGMFKVN 1215


>ref|XP_006279399.1| hypothetical protein CARUB_v10007977mg [Capsella rubella]
           gi|482548097|gb|EOA12297.1| hypothetical protein
           CARUB_v10007977mg [Capsella rubella]
          Length = 417

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 15/269 (5%)
 Frame = +1

Query: 10  LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
           LKV++LI PQ   W+L  L    P    D IR        +LDD+ VW++++DG  SVK+
Sbjct: 6   LKVSSLITPQGE-WDLQLLNELFP--PCDVIRICSFPPAVELDDKLVWAYTRDGNYSVKS 62

Query: 190 CYNWLQQQQHVISSSSMVPQWR------SLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXX 351
             NWL  Q+H +  S      R       +W       IK F W +              
Sbjct: 63  G-NWLLTQEHEVVDSVEESTKRINAVKEKVWAFHTAPKIKMFFWRVLSGAIAVSECLRRH 121

Query: 352 GMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQT---- 519
           G+N   +C +C+ E+ETISH+   C+    +W+    V  +PI  +  S   +       
Sbjct: 122 GINTNPLCQVCKVEEETISHVLFGCQLAQQVWS----VSGLPIPANGFSSSTVENVEYCF 177

Query: 520 INDGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLN 699
           +  G ++  +     +P++LW+IW  RN LVF+ R      L + A +   E+ +  +  
Sbjct: 178 MIMGKSEVSLQSRQAIPWLLWEIWKARNGLVFAQRVSDPHILWVLAKDEMLEWCQHQERI 237

Query: 700 CRTMDTTAHPV-----QWFPPPNSCIKLN 771
             T DT    V     +W  P    +K N
Sbjct: 238 VSTDDTDGRRVVGLDTRWCKPTVGKLKCN 266


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase); Polynucleotidyl
            transferase, Ribonuclease H fold [Medicago truncatula]
          Length = 729

 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 12/253 (4%)
 Frame = +1

Query: 49   WNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKACYNWLQQQQHVIS 228
            W+L+ L + + ++ ++QI A+P        D   W  +     +V++ YN  Q+    + 
Sbjct: 402  WDLNFLMDNLHVDIVNQILALPTPSDFDGPDTIGWGGTNTLKFTVQSAYNLQQENPFAVG 461

Query: 229  SSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPTMCPLCQREDETIS 408
                   W++LW  K P  I+ F+WL AH            G+ I   CP C REDET+ 
Sbjct: 462  GD-----WKTLWNWKGPHRIQTFIWLAAHGRILTNYRRSKWGVGISPTCPCCAREDETVI 516

Query: 409  HLFLSCEKVYPIWAAL---SYVYNIPIRDSTMSLDWILQTINDGG-ADNEVCLEVLVPFI 576
            H+   C     +W  L   +Y+ N    D     +W+   +N  G  DN    +      
Sbjct: 517  HVLRDCVHSTQVWLRLIPHNYITNFFSFDCR---EWVFNNLNKKGIGDNPATWQTTFMTT 573

Query: 577  LWKIWCCRNDLVFS---YRPFLWKNLIITAFNAAAEFSRILDLNCRTMDTTAHP-----V 732
             W +W  RN  +F     RP     L+I       +F+R ++ N + +  ++H      +
Sbjct: 574  CWYLWNWRNKSIFEIGFQRPSN-PTLVI------QKFTREIEDNTKLVHKSSHQKETIYI 626

Query: 733  QWFPPPNSCIKLN 771
             W  PP   +KLN
Sbjct: 627  GWMRPPFGWVKLN 639


>ref|XP_006296178.1| hypothetical protein CARUB_v10025338mg [Capsella rubella]
           gi|482564886|gb|EOA29076.1| hypothetical protein
           CARUB_v10025338mg [Capsella rubella]
          Length = 417

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
 Frame = +1

Query: 10  LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
           LKV++LI PQ   W+L  L    P    D IR        +L D+ VW++++DG  SVK+
Sbjct: 6   LKVSSLITPQGE-WDLQLLNEVFP--PCDVIRICSFPPAVELSDKLVWAYTRDGNYSVKS 62

Query: 190 CYNWLQQQQHVI------SSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXX 351
             NWL   +H +      S+  +      +W L     IK F W +              
Sbjct: 63  G-NWLLTHEHEVVEFVEESTKRINAVKEKVWGLHTAPKIKLFFWRVLSGAVAVSECLHRH 121

Query: 352 GMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRD------STMSLDWIL 513
           G+N   +C  C+ E+ETISH+   C+    +W+    V  +P+ D      +  ++++  
Sbjct: 122 GINSNPLCQACKVEEETISHVLFGCQLAQQVWS----VSGLPVPDNGFFPTTVENMEFCF 177

Query: 514 QTINDGGADNEVCLE--VLVPFILWKIWCCRNDLVFSYR 624
             +    + +EV L+    +P++LW+IW  RNDLVF+ R
Sbjct: 178 MVM----SQSEVPLQSRQAIPWLLWEIWKARNDLVFAQR 212


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 719

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 4/194 (2%)
 Frame = +1

Query: 46   SWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKACYNWLQQQQHVI 225
            SWN+S L++ +P   + QI ++P        D+ +W+ + +G  SVK+ YN       V 
Sbjct: 500  SWNISLLKSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANGKFSVKSTYNSFFDSAGVS 559

Query: 226  SSSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPTMCPLCQREDETI 405
            +     P W  LW+L CP  +K F+W + H            G +    CP+C+  DET+
Sbjct: 560  N-----PLWTHLWKLNCPPKLKTFMWSVLHQKILTNVQRVRRGFSTIASCPICKNADETL 614

Query: 406  SHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDW----ILQTINDGGADNEVCLEVLVPF 573
             HL   C +   IW ++    +I    ++ SLDW      Q        N +    L  F
Sbjct: 615  LHLLRDCPRSQAIWNSILRPGSI---TNSFSLDWNGWISAQFHCHVVIKNNIQWCNLFVF 671

Query: 574  ILWKIWCCRNDLVF 615
            + W IW  RN ++F
Sbjct: 672  VCWFIWKWRNKVIF 685


>ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 411

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 4/245 (1%)
 Frame = +1

Query: 49  WNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKACYNWLQQQQHVIS 228
           WN+  L++ +P   + QI ++P        D+ +W+ + +G  SVK+ YN       V +
Sbjct: 14  WNIPLLKSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANGKFSVKSAYNSFFDSAGVSN 73

Query: 229 SSSMVPQWRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXXXGMNIPTMCPLCQREDETIS 408
                P W  LW+L CP  +K F+W + H            G +    CP+C+  DET+ 
Sbjct: 74  -----PLWTHLWKLNCPPKLKTFMWYVLHQKILTNVQRVRRGFSTIASCPICKNADETLL 128

Query: 409 HLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDW----ILQTINDGGADNEVCLEVLVPFI 576
           HL   C +   IW ++    +I    ++ SLDW      Q        N +    L  F+
Sbjct: 129 HLLRDCPRSQAIWNSILSPGSI---TNSFSLDWNGWICAQFHCHVVIKNNIQWCNLFVFV 185

Query: 577 LWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNCRTMDTTAHPVQWFPPPNS 756
            W IW  RN ++F     L        +N   E+S            +     W  PP +
Sbjct: 186 CWFIWKWRNKVIFDPAFILPACPNKVIWNYVDEWSSAQSKASMQSMFSYTMFSWCKPPEN 245

Query: 757 CIKLN 771
             KLN
Sbjct: 246 FYKLN 250


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 12/265 (4%)
 Frame = +1

Query: 13   KVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKAC 192
            KV  LIDP T +W+   L      E +  I++IP+    +++D   W     G  +VK+ 
Sbjct: 1215 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHV--EMEDVLAWHFDARGCFTVKSA 1272

Query: 193  YNWLQQQQHVISSSSMVPQ-----------WRSLWRLKCPSHIKHFLWLLAHXXXXXXXX 339
            Y  +Q++    +S +  P            W+ LW+L  P  IKHFLW + H        
Sbjct: 1273 YK-VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRAN 1331

Query: 340  XXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQT 519
                GM++ T C +C R +E   HLF  C+ V  +W AL+      + +   S   +LQ+
Sbjct: 1332 LHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQS 1391

Query: 520  INDGGADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLN 699
            I     +NE    ++    LW+ W  RN++     P     L     + A EF R   +N
Sbjct: 1392 IY-CRPENERTSAIV---CLWQWWKERNEVREGGIPRSPAELSHLIMSQAGEFVR---MN 1444

Query: 700  CRTMD-TTAHPVQWFPPPNSCIKLN 771
             +     T     W  PP + +K+N
Sbjct: 1445 VKEKSPRTGECAVWRRPPLNFVKIN 1469


>ref|XP_002461212.1| hypothetical protein SORBIDRAFT_02g042875 [Sorghum bicolor]
           gi|241924589|gb|EER97733.1| hypothetical protein
           SORBIDRAFT_02g042875 [Sorghum bicolor]
          Length = 518

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 74/270 (27%), Positives = 113/270 (41%), Gaps = 17/270 (6%)
 Frame = +1

Query: 13  KVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKAC 192
           +VA LIDP T +W+   +++    E    I AIP+ + S  DD   W +   G  SVK+ 
Sbjct: 103 RVAELIDPITGTWDHQLVKDLFWEEDAINILAIPVRQNS--DDIIAWHYDPKGIFSVKSA 160

Query: 193 YNWLQ---QQQHVISSSSMVPQ---------WRSLWRLKCPSHIKHFLWLLAHXXXXXXX 336
           Y+ L+   +Q+  +       Q         W+ +W L+CP  IK F+W +AH       
Sbjct: 161 YHVLEGVEEQKRQVQKGETSRQGACTSEDRLWKDIWHLQCPPKIKQFIWRVAHNSLAMKM 220

Query: 337 XXXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQ 516
                 +++ T CP+C R DE   H FL C+++   W  L         DS   L    Q
Sbjct: 221 NIKRRHVDLDTRCPVCLRLDEDGGHCFLKCKQMRRCWRELQL-------DSVRCLLLNAQ 273

Query: 517 TINDG-----GADNEVCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFS 681
           T  +      G   + CL   +  +LWK W  RN    S  P      ++ A N+   F 
Sbjct: 274 TSKEFIRCILGLKTDQCLRTCL--LLWKWWDARNKANAS-EPMPSCLDVVCAVNSI--FR 328

Query: 682 RILDLNCRTMDTTAHPVQWFPPPNSCIKLN 771
            +     +T        +W PP    +K+N
Sbjct: 329 ELSIEESKTTQIQVPRKRWKPPDQQFLKIN 358


>ref|XP_004293049.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
            vesca subsp. vesca]
          Length = 677

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 73/272 (26%), Positives = 117/272 (43%), Gaps = 15/272 (5%)
 Frame = +1

Query: 1    YPPLKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVS 180
            + PL VA +ID +   W +  L+  +     + I+AIP+   S+ D   VW HSK    S
Sbjct: 333  FTPLLVAEVID-ENREWQIDHLKPFLRDSDFNSIKAIPIGAASERDVL-VWPHSKSENYS 390

Query: 181  VKACYN-----WLQQQQHVISSSSMVPQ--WRSLWRLKCPSHIKHFLWLLAHXXXXXXXX 339
            V++ Y      W+ +     S+S  V    W+  W  K    + +F W            
Sbjct: 391  VRSGYYKTLSAWVPKASIKASTSHKVDPHVWKIAWGSKLAPKVSNFTWKALANALPTCEN 450

Query: 340  XXXXGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQT 519
                 +    +C +C    ETI H  L CE    +W      Y++  +  T    W+L+T
Sbjct: 451  LHKRNIGNSPLCKICGLFPETIEHCLLLCEWTELVWFGSLAGYSLNKQSITTLEKWLLET 510

Query: 520  INDG---GADNEVCLEVLVPFILWKIWCCRNDLVFSY---RPFLWKNLIITAFN--AAAE 675
               G     D + CL+ L+ + LW+IW  R ++V S+    P +    I   F    AA+
Sbjct: 511  DKKGAFLADDKQFCLQ-LILWHLWEIWKHRYEIVMSHGKPNPKVVIEKIKHNFGEWGAAQ 569

Query: 676  FSRILDLNCRTMDTTAHPVQWFPPPNSCIKLN 771
             S +  LN  +  + ++   W PPPN  +K+N
Sbjct: 570  VSNLKSLNMTSSQSASN--DWCPPPNHVVKVN 599


>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
            gi|462406722|gb|EMJ12186.1| hypothetical protein
            PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 71/271 (26%), Positives = 109/271 (40%), Gaps = 17/271 (6%)
 Frame = +1

Query: 10   LKVAALIDPQTHSWNLSALENEVPIETLDQIRAIPLAEWSQLDDRRVWSHSKDGTVSVKA 189
            L+V A+I+ +   WNL  + + +       I  +     S+L DR +W   ++G+ SV++
Sbjct: 354  LRVEAIINRELDEWNLDPIRHAISDSDARAITRVKFGS-SRLPDRLIWPMERNGSYSVRS 412

Query: 190  CYNWLQ----QQQHVISSSSMVPQ---WRSLWRLKCPSHIKHFLWLLAHXXXXXXXXXXX 348
             Y+WL     ++++   SSSM      W+ +W+   P  I++FLW               
Sbjct: 413  GYHWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRNFLWRALRNCLATSANLHK 472

Query: 349  XGMNIPTMCPLCQREDETISHLFLSCEKVYPIWAALSYVYNIPIRDSTMSLDWILQTIND 528
              +    MCPLC    ET  H+ L C  V P+W   S    I  +  T    W+   I  
Sbjct: 473  KKIARSPMCPLCNDHPETAEHILLLCPWVEPVWFRCSLNLRINRQAVTSFGQWLGNVIEK 532

Query: 529  GGADNE--VCLEVLVPFILWKIWCCRNDLVFSYRPFLWKNLIITAFNAAAEFSRILDLNC 702
            G    E   CL V + +  W+IW  +   V  +           A  A  EF   LD   
Sbjct: 533  GKTPQERSRCLTV-IAYFCWQIWKDKCKAVLEHISPSPARTTHAASIAINEFLGSLD--- 588

Query: 703  RTMDTTAHPV--------QWFPPPNSCIKLN 771
                 T HP          W PP +  +K+N
Sbjct: 589  HGRHQTEHPTLSNDNQQQLWNPPTSPFVKVN 619