BLASTX nr result

ID: Papaver25_contig00041422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00041422
         (528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006606038.1| PREDICTED: putative F-box protein At3g58860-...    72   6e-11
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    64   2e-08
ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-...    56   6e-06
ref|XP_006293205.1| hypothetical protein CARUB_v10019525mg, part...    56   6e-06

>ref|XP_006606038.1| PREDICTED: putative F-box protein At3g58860-like isoform X1
           [Glycine max]
          Length = 468

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 50/163 (30%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
 Frame = +3

Query: 3   LQSFKYSSVLAKDFVLHNFFSLLDAEIVLSRSADMGETGELGSLATK---LFCGLSYVKR 173
           L SF Y   L  D+ ++N  SL    + L  + D+GE+  L  +A +   L  G+S  K 
Sbjct: 251 LNSFYYIGTLRNDYWIYNSVSLDWGLMGLCSTDDIGESSRLREVAQRAGRLLRGISCAKE 310

Query: 174 LTMSDNSLKLLSYQDHFHTSMPSFYNLIDLEIMSAGVYDGYGCRDAGNLHCWIVRILLNF 353
           L ++  + ++L+Y ++    MP  Y +  L  +S G    +GC           R L  F
Sbjct: 311 LLLTPYAFEVLTYSEYLCACMPVLYKVTYLGFLSPGTAINFGC-----------RALAKF 359

Query: 354 LHISPNLESLVFVDGFGNNKSTNNGGWSLDLIPQCLLLHLKSI 482
           L   P LE LVF  G   + +   G W LD +P C   +LK I
Sbjct: 360 LEKLPCLELLVFQSGVCLSGNHEEGSWILDPVPSCFSRYLKLI 402


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 7/182 (3%)
 Frame = +3

Query: 3   LQSFKYSSVLAKDFVLHNFFSLLDAEIVLSR-SADMGETGELGSLAT-----KLFCGLSY 164
           L+    +  L+KD+ + +  SL+ A I + + S +  E+   G ++      +L   +S 
Sbjct: 246 LEYLSITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISN 305

Query: 165 VKRLTMSDNSLKLLSYQDHFHTSMPSFYNLIDLEIMSAGVYDGYGCRDAGNLHCWIVRIL 344
           VK L+++  +L  LS     +  +P+F+N+  LE +  G ++            W    L
Sbjct: 306 VKCLSLTGVTLDSLSGTIGDY-KLPTFHNMTRLEFLFIGGFN------------W--DFL 350

Query: 345 LNFLHISPNLESLVFVDGFGNNKSTNNGGWSLDL-IPQCLLLHLKSIEFRRCFWNEFEKD 521
            NFLH SPNLE+LV   G+ N       GW + L +P CL+LHLK IE RR    ++E +
Sbjct: 351 PNFLHSSPNLEALVIETGYTNELIPE--GWLMPLQVPACLVLHLKEIEIRRIVGEDYELE 408

Query: 522 LI 527
            +
Sbjct: 409 AV 410


>ref|XP_006366040.1| PREDICTED: putative F-box protein At3g58860-like [Solanum
           tuberosum]
          Length = 474

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/171 (25%), Positives = 72/171 (42%)
 Frame = +3

Query: 3   LQSFKYSSVLAKDFVLHNFFSLLDAEIVLSRSADMGETGELGSLATKLFCGLSYVKRLTM 182
           L   KYS  L+ +  L+N  S ++A I +    +  +  ++   A KLF GL  +    +
Sbjct: 265 LTFLKYSGYLSNEICLYNLSSSVNASIHIPILYE--KRNQIAFRAVKLFRGLHKISAARI 322

Query: 183 SDNSLKLLSYQDHFHTSMPSFYNLIDLEIMSAGVYDGYGCRDAGNLHCWIVRILLNFLHI 362
           S+ +++ L   D     +P FYNL  LE+                L    +  L   L  
Sbjct: 323 SNRAIESLFIADIEKDQLPIFYNLTHLELSM-------------ELENHSIGPLKELLQC 369

Query: 363 SPNLESLVFVDGFGNNKSTNNGGWSLDLIPQCLLLHLKSIEFRRCFWNEFE 515
            P L+SL F +G           W+L  +P C L  LK++++     N+ E
Sbjct: 370 LPKLQSLHFSEGLDPCMHLCEDDWNLRSVPPCFLSSLKTVKYSNFHGNDTE 420


>ref|XP_006293205.1| hypothetical protein CARUB_v10019525mg, partial [Capsella rubella]
           gi|482561912|gb|EOA26103.1| hypothetical protein
           CARUB_v10019525mg, partial [Capsella rubella]
          Length = 383

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 59/171 (34%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
 Frame = +3

Query: 12  FKYSSVLAKDFVLHNFFSLLDAEIVLSRSADM-------------GETGELGSLATKLFC 152
           F+YS  +A  + + NF SL  A + L  + D               + G +G+ AT L  
Sbjct: 146 FEYSDTIADQYPIVNFNSLTGASLNLRMAHDQINKAKFSDDDLIKPDEGMVGN-ATDLII 204

Query: 153 GLSYVKRLTMSDNSLKLLSYQDHFHTSMPSFYNLIDLEIMSAGVYDGYGCRDAGNLHCWI 332
           G+S VK L +SDN+L++LS+       MP+F NLI L I +         RD G    W 
Sbjct: 205 GISNVKTLYLSDNTLEVLSF---CCEPMPTFNNLIRLTIKTD--------RDVG----W- 248

Query: 333 VRILLNFLHISPNLESLVFVDG----FGNN-KSTNN---GGWSLDLIPQCL 461
              L   L  SPNL++L+F DG    FG+  KST+      W  + IP CL
Sbjct: 249 -ESLTALLKNSPNLKTLIF-DGLLHRFGDKCKSTDECLCSPWEEEDIPTCL 297


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