BLASTX nr result
ID: Papaver25_contig00041407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00041407
(935 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prun... 112 1e-45
gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officin... 147 6e-33
ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, part... 140 9e-31
ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, part... 126 1e-26
ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, part... 123 9e-26
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 90 3e-22
gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 90 3e-22
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 88 5e-22
ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group] g... 89 6e-22
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 90 8e-22
gb|ABD63147.1| Integrase core domain containing protein [Asparag... 81 8e-22
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 84 2e-21
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 84 8e-21
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 86 1e-20
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 85 3e-20
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 83 3e-20
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 85 4e-20
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 86 7e-20
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 86 7e-20
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 86 7e-20
>ref|XP_007219137.1| hypothetical protein PRUPE_ppa015965mg [Prunus persica]
gi|462415599|gb|EMJ20336.1| hypothetical protein
PRUPE_ppa015965mg [Prunus persica]
Length = 1484
Score = 112 bits (281), Expect(3) = 1e-45
Identities = 46/71 (64%), Positives = 60/71 (84%)
Frame = +3
Query: 6 FHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYG 185
FHPQTDGQTEVVNRT+V+LLR YN + P++WD++LPY+Q+ +NRA+HGS+ K PFEVC G
Sbjct: 1228 FHPQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCLG 1287
Query: 186 FIPNSPSTLCF 218
++P SP L F
Sbjct: 1288 YLPQSPFDLAF 1298
Score = 84.7 bits (208), Expect(3) = 1e-45
Identities = 38/89 (42%), Positives = 55/89 (61%)
Frame = +2
Query: 191 SKFSFDIVLSGSAIGNNSRTGEVTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQ 370
S F +S + + A+KF+ R+++IH +V L+++Q +YK RHDKHR+
Sbjct: 1292 SPFDLAFTMSDQPLSGKEEEEHIRAKKFLERVRKIHIEVEAQLKRSQQRYKARHDKHRVP 1351
Query: 371 HTFQVGDSVWLYLGKARLQGPNKKLKPLR 457
F+ GD VWL+LGK RL G KKLKP+R
Sbjct: 1352 CNFKEGDLVWLHLGKERLTGEGKKLKPIR 1380
Score = 34.3 bits (77), Expect(3) = 1e-45
Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +3
Query: 456 ENLKLFEPSLL-DEREESPLLPTMHDL 533
ENLKLFEPSLL D+ EE LP++ DL
Sbjct: 1412 ENLKLFEPSLLDDDPEEDTRLPSVDDL 1438
>gb|ABD63115.1| hypothetical protein 18.t00011 [Asparagus officinalis]
Length = 887
Score = 147 bits (371), Expect = 6e-33
Identities = 92/245 (37%), Positives = 134/245 (54%), Gaps = 13/245 (5%)
Frame = +3
Query: 6 FHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYG 185
FHPQTDGQTEVVNRTI+Y+LR YN + P+ WD++LPY+Q+ +NRA+HGSS K PFE CYG
Sbjct: 644 FHPQTDGQTEVVNRTIIYMLRGYNFKHPKIWDESLPYLQFVFNRAIHGSSGKSPFETCYG 703
Query: 186 FIPNSPSTLCF-LEVQ*VTIQGPER*LQRSLFIVYNRFMRRFIRIWKKLNLSTRSDMINI 362
F+P+SP + F E +G ER F+ + + K + S + +
Sbjct: 704 FLPSSPFDIVFSSEATADGKEGSER-QHAQRFLEKIAHIHATVEAQLKKSQSKYKERLKG 762
Query: 363 ECSTHFRLEIRCGYILERRVCKVLIRN*SH---------*ENLKLFEPSLL-DEREESPL 512
E + IL++ V + H E LKLFEP LL DE ++ +
Sbjct: 763 EGKKLKPIYYGSFRILDQMGDNVFRLDLPHYLGMYSVINAEYLKLFEPPLLDDEGDDKVI 822
Query: 513 LPTMHDL--VPSEAATEDYLLGKKTRMTQSGEQEFF*VCAKGRYPNRAKWYSLEQVQKNF 686
LP + DL E ED +L +KT MT+ G +E F + +G+ P++ KW++ E+ + F
Sbjct: 823 LPHVEDLWFDREEPLNEDCILERKTIMTRRGTKESFLIRRQGQVPSKTKWFNRERGAREF 882
Query: 687 PHFLY 701
P +
Sbjct: 883 PQLKF 887
>ref|XP_007203318.1| hypothetical protein PRUPE_ppa019964mg, partial [Prunus persica]
gi|462398849|gb|EMJ04517.1| hypothetical protein
PRUPE_ppa019964mg, partial [Prunus persica]
Length = 1488
Score = 140 bits (352), Expect = 9e-31
Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 31/261 (11%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
AFH QTDGQTEVVNRT+V+LLR YN + P++WD++LPY+Q+ +NRA+HGS+ K PFEVC
Sbjct: 1229 AFHLQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCL 1288
Query: 183 GFIPNSPSTLCF-LEVQ*VTIQGPER*LQRSLFIVYNRFMRRFIRIWKKLNLS-----TR 344
G++P SP L F + Q ++ + E ++ F+ R + I + +L S R
Sbjct: 1289 GYLPQSPFDLAFTMSDQPLSGKEEEEHIRAKKFL--ERIRKIHIEVEAQLKRSQQRYKAR 1346
Query: 345 SDMINIECS--------THFRLE-----------IRCGYILERRVCKVLIRN*SH*E--- 458
D + C+ H E IR G ++ K + N E
Sbjct: 1347 HDKHRVPCNFKEGDLVWLHLGKERLTGEGKKLKPIRYGPF---KIIKQIGDNAFQLELPP 1403
Query: 459 NLKLFEPSLL-DEREESPLLPTMHDL--VPSEAATEDYLLGKKTRMTQSGEQEFF*VCAK 629
+ ++ PSLL D+ EE LP++ DL + +D +L +K R T+ G+ E+F + +K
Sbjct: 1404 YMHMYSPSLLDDDPEEDTRLPSVDDLQIEQEDPLQQDCILEQKVRETRHGKYEYFRIGSK 1463
Query: 630 GRYPNRAKWYSLEQVQKNFPH 692
G+ P+++KWY ++ FPH
Sbjct: 1464 GQLPSKSKWYIRDKAILEFPH 1484
>ref|XP_007225525.1| hypothetical protein PRUPE_ppa026504mg, partial [Prunus persica]
gi|462422461|gb|EMJ26724.1| hypothetical protein
PRUPE_ppa026504mg, partial [Prunus persica]
Length = 750
Score = 126 bits (317), Expect = 1e-26
Identities = 78/217 (35%), Positives = 112/217 (51%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
AFHPQTDGQTEVVNRT+V+LL YN + PR+WD++LPY+Q+ +NRA+HGS+ K PFEVC
Sbjct: 599 AFHPQTDGQTEVVNRTMVHLLWGYNSKHPRTWDESLPYLQFAFNRAIHGSTLKSPFEVCL 658
Query: 183 GFIPNSPSTLCFLEVQ*VTIQGPER*LQRSLFIVYNRFMRRFIRIWKKLNLSTRSDMINI 362
G++P SP L F T SD
Sbjct: 659 GYLPQSPFDLAF----------------------------------------TMSD---- 674
Query: 363 ECSTHFRLEIRCGYILERRVCKVLIRN*SH*ENLKLFEPSLLDEREESPLLPTMHDLVPS 542
+ + H + + C + K +I EN+KLF+PSLLD+ E +
Sbjct: 675 QPARHDKHRVPCNF-------KEVINP----ENIKLFKPSLLDDDPEE----------DT 713
Query: 543 EAATEDYLLGKKTRMTQSGEQEFF*VCAKGRYPNRAK 653
++ED LL +K R T+ G+ E+F + K + P+++K
Sbjct: 714 RLSSEDCLLEQKVRETRHGKYEYFCIDRKCQLPSKSK 750
>ref|XP_007224256.1| hypothetical protein PRUPE_ppa018408mg, partial [Prunus persica]
gi|462421192|gb|EMJ25455.1| hypothetical protein
PRUPE_ppa018408mg, partial [Prunus persica]
Length = 1440
Score = 123 bits (309), Expect = 9e-26
Identities = 93/270 (34%), Positives = 136/270 (50%), Gaps = 40/270 (14%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
AFHPQTDGQTEVVNRT+V+LLR YN + P++WD++LPY+Q+ +NRA+HGS+ K PFEVC
Sbjct: 1193 AFHPQTDGQTEVVNRTMVHLLRGYNSKHPKTWDESLPYLQFAFNRAIHGSTLKSPFEVCL 1252
Query: 183 GFIPNSPSTLCF-LEVQ*VTIQGPER*LQRSLFIVYNRFMRRFIRIWKKLNLS-----TR 344
G++P SP L F + Q ++ + E ++ F+ R + I + +L S R
Sbjct: 1253 GYLPQSPFDLAFTMSDQPLSGKEEEEHIRAKKFL--ERVRKIHIEVEAQLKRSQQRYKAR 1310
Query: 345 SDMINIECS--------THFRLE-----------IRCGYILERRVCKVLIRN*SH*E--- 458
D ++ C+ H E IR G ++ K + N E
Sbjct: 1311 HDKHHVPCNFKEGDLVWLHLGKERLTGEGKKLKPIRYGPF---KIIKQIGDNAFQLELPP 1367
Query: 459 -----------NLKLFEPSLL-DEREESPLLPTMHDLVPSEAATEDYLLGKKTRMTQSGE 602
NLKLFEPSLL D+ EE LP++ DL + ED L +
Sbjct: 1368 YMHMYSVINAENLKLFEPSLLDDDPEEDTRLPSVDDL---QIEQEDAL-----------Q 1413
Query: 603 QEFF*VCAKGRYPNRAKWYSLEQVQKNFPH 692
Q++ + P+++KWY ++ FPH
Sbjct: 1414 QDW-------QLPSKSKWYIRDKAIIEFPH 1436
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 90.1 bits (222), Expect(2) = 3e-22
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ LLRA ++ + W++ LP++++ YNRAVH ++ CPFEV YGF
Sbjct: 1362 HPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 1421
Query: 189 IPNSPSTLCFLEVQ 230
P SP L L +Q
Sbjct: 1422 KPLSPIDLLPLPLQ 1435
Score = 42.7 bits (99), Expect(2) = 3e-22
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 EVTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARL-QG 430
++ A K +++IHEK + +EK Y +K+R + TF+ GD VW++L K R Q
Sbjct: 1439 DMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQK 1498
Query: 431 PNKKLKP 451
KL P
Sbjct: 1499 RKSKLMP 1505
>gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]
gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 681
Score = 90.1 bits (222), Expect(2) = 3e-22
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ LLRA ++ + W++ LP++++ YNRAVH ++ CPFEV YGF
Sbjct: 330 HPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 389
Query: 189 IPNSPSTLCFLEVQ 230
P SP L L +Q
Sbjct: 390 KPLSPIDLLPLPLQ 403
Score = 42.7 bits (99), Expect(2) = 3e-22
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 EVTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARL-QG 430
++ A K +++IHEK + +EK Y +K+R + TF+ GD VW++L K R Q
Sbjct: 407 DMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQK 466
Query: 431 PNKKLKP 451
KL P
Sbjct: 467 RKSKLMP 473
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 87.8 bits (216), Expect(2) = 5e-22
Identities = 35/68 (51%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA + + W++ LP+I++ YNR++H +++ CPFE+ YGF
Sbjct: 1403 HPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCPFEIVYGF 1462
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1463 LPRAPIDL 1470
Score = 44.3 bits (103), Expect(2) = 5e-22
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 IQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
I +IHE +N+E+ KYK DK R F GD VWL+L K R K KL P
Sbjct: 1490 ILKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMP 1546
>ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]
gi|113631773|dbj|BAF25454.1| Os09g0491900 [Oryza sativa
Japonica Group]
Length = 681
Score = 89.0 bits (219), Expect(2) = 6e-22
Identities = 40/74 (54%), Positives = 54/74 (72%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ LLRA ++ + W++ LP++++ YNRAVH ++ CPFEV YGF
Sbjct: 330 HPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGF 389
Query: 189 IPNSPSTLCFLEVQ 230
P +P L L +Q
Sbjct: 390 KPLAPIDLLPLPLQ 403
Score = 42.7 bits (99), Expect(2) = 6e-22
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 254 EVTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARL-QG 430
++ A K +++IHEK + +EK Y +K R + TF+ GD VW++L K R Q
Sbjct: 407 DMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKDRKKVTFEPGDLVWVHLRKDRFPQK 466
Query: 431 PNKKLKP 451
KL P
Sbjct: 467 RKSKLMP 473
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 89.7 bits (221), Expect(2) = 8e-22
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
A HPQTDGQTEVVNRT+ LLR ++ +SW+++LPY+++ YNRA+H ++ PFEV Y
Sbjct: 1080 ACHPQTDGQTEVVNRTLTQLLRVVIRKNLKSWEESLPYVEFAYNRAIHSTTNMSPFEVAY 1139
Query: 183 GFIPNSPSTLCFLEV 227
GF P +P L L V
Sbjct: 1140 GFNPLTPLDLIPLHV 1154
Score = 41.6 bits (96), Expect(2) = 8e-22
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 257 VTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPN 436
V A K I++ H KV +EK +Y ++ +K R F+ GD VW++ K R
Sbjct: 1160 VDAAKKAQGIREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNRFPNQR 1219
Query: 437 K-KLKP 451
K KL P
Sbjct: 1220 KSKLMP 1225
>gb|ABD63147.1| Integrase core domain containing protein [Asparagus officinalis]
Length = 870
Score = 81.3 bits (199), Expect(2) = 8e-22
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 203 FDIVLSGSAIGNNSRTGE-VTAEKFIHRIQQIHEKVHQNLEKAQPKYKERHDKHRMQHTF 379
FDIV SG A + E A++F+ +I IH V L+K+Q KYK +HD+HR+ F
Sbjct: 627 FDIVFSGEATADGKEGNERQRAQQFLEKIAHIHASVEAQLKKSQAKYKVKHDQHRVPCNF 686
Query: 380 QVGDSVWLYLGKARLQGPNKKLKPLR 457
GD VWL LGK RL+G KK KP+R
Sbjct: 687 GKGDMVWLKLGKERLKGEEKKSKPIR 712
Score = 50.1 bits (118), Expect(2) = 8e-22
Identities = 26/64 (40%), Positives = 31/64 (48%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
AFHPQTDGQTE + +NRA++GSS K PFE CY
Sbjct: 589 AFHPQTDGQTE-----------------------------FTFNRAIYGSSGKSPFETCY 619
Query: 183 GFIP 194
GF+P
Sbjct: 620 GFLP 623
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 84.0 bits (206), Expect(2) = 2e-21
Identities = 33/68 (48%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W++ LP+I++ YNR++H +++ CPF++ YG
Sbjct: 1359 HPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCPFQIVYGL 1418
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1419 LPRAPIDL 1426
Score = 46.2 bits (108), Expect(2) = 2e-21
Identities = 24/55 (43%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++HE +N+E+ KYK DK R + TF+ GD VWL+L K R K KL P
Sbjct: 1448 KLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLMP 1502
Score = 61.2 bits (147), Expect = 6e-07
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 3 AFHPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCY 182
A+HPQTDGQTE +N+ + +L A ++WDK+LPY ++ YN + S + P+E Y
Sbjct: 2179 AYHPQTDGQTERLNQILEDMLHACVLDFGKTWDKSLPYAEFSYNNSYQASIQMAPYEALY 2238
Query: 183 G 185
G
Sbjct: 2239 G 2239
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 83.6 bits (205), Expect(2) = 8e-21
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ LLRA Q+ ++W++ LP++++ YNR VH +++ PFE+ YGF
Sbjct: 285 HPQTDGQTEVVNRTLSTLLRAIIQKNLKTWEECLPHVEFAYNRTVHSATKFSPFEIVYGF 344
Query: 189 IPNSPSTLCFLEV 227
P +P L L +
Sbjct: 345 NPLTPLDLLPLPI 357
Score = 44.3 bits (103), Expect(2) = 8e-21
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 IQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++Q+HE+ Q++EK +Y + +K R Q FQ GD VW+++ K R + KL P
Sbjct: 372 VKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPGDWVWVHMRKERFPAQRRSKLLP 428
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 86.3 bits (212), Expect(2) = 1e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W++ LP++++ YNR+ H +++KCPFE+ YG
Sbjct: 1283 HPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGL 1342
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1343 LPRAPIDL 1350
Score = 40.8 bits (94), Expect(2) = 1e-20
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNKKLKPLRKSEA 469
++HE +N+E+ KYK K + F+ GD VWL+L K R K P R
Sbjct: 1372 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADGP 1431
Query: 470 F 472
F
Sbjct: 1432 F 1432
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 85.1 bits (209), Expect(2) = 3e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNR++ +LRA + + W++ LP+I++ YNR++H +++ CPFE+ YGF
Sbjct: 1418 HPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGF 1477
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1478 LPRAPIDL 1485
Score = 40.8 bits (94), Expect(2) = 3e-20
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 IQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
I ++HE +N+E+ +YK DK R F GD VWL+L K R K KL P
Sbjct: 1505 ILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMP 1561
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 83.2 bits (204), Expect(2) = 3e-20
Identities = 33/68 (48%), Positives = 51/68 (75%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W+ LP+I++ YNR++H +++ CPF++ YG
Sbjct: 1362 HPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGL 1421
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1422 LPRAPIDL 1429
Score = 42.7 bits (99), Expect(2) = 3e-20
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++HE +N+E+ +YK DK R + F+ GD VWL+L K R K KL P
Sbjct: 1451 KLHETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLP 1505
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 84.7 bits (208), Expect(2) = 4e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNR++ +LRA + + W++ LP+I++ YNR++H +++ CPFE+ YGF
Sbjct: 1415 HPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCPFEIVYGF 1474
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1475 LPRAPIDL 1482
Score = 40.8 bits (94), Expect(2) = 4e-20
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 IQQIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
I ++HE +N+E+ +YK DK R F GD VWL+L K R K KL P
Sbjct: 1502 ILKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMP 1558
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 85.9 bits (211), Expect(2) = 7e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W++ LP++++ YNR+ H +++KCPFE+ YG
Sbjct: 1387 HPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGL 1446
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1447 LPRAPIDL 1454
Score = 38.9 bits (89), Expect(2) = 7e-20
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++HE +N+E+ KYK K + F+ GD VWL+L K R K KL P
Sbjct: 1476 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLP 1530
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 85.9 bits (211), Expect(2) = 7e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W++ LP++++ YNR+ H +++KCPFE+ YG
Sbjct: 1387 HPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGL 1446
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1447 LPRAPIDL 1454
Score = 38.9 bits (89), Expect(2) = 7e-20
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++HE +N+E+ KYK K + F+ GD VWL+L K R K KL P
Sbjct: 1476 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLP 1530
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 85.9 bits (211), Expect(2) = 7e-20
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +3
Query: 9 HPQTDGQTEVVNRTIVYLLRAYNQQRPRSWDKNLPYIQYCYNRAVHGSSRKCPFEVCYGF 188
HPQTDGQTEVVNRT+ +LRA ++ + W++ LP++++ YNR+ H +++KCPFE+ YG
Sbjct: 1387 HPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCPFEIVYGL 1446
Query: 189 IPNSPSTL 212
+P +P L
Sbjct: 1447 LPRAPIDL 1454
Score = 38.9 bits (89), Expect(2) = 7e-20
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 QIHEKVHQNLEKAQPKYKERHDKHRMQHTFQVGDSVWLYLGKARLQGPNK-KLKP 451
++HE +N+E+ KYK K + F+ GD VWL+L K R K KL P
Sbjct: 1476 KLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLP 1530