BLASTX nr result

ID: Papaver25_contig00040598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00040598
         (378 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB82461.1| F-box/kelch-repeat protein [Morus notabilis]            59   7e-07
ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula] ...    59   7e-07
ref|XP_003611119.1| F-box family protein [Medicago truncatula] g...    59   9e-07
ref|XP_004295779.1| PREDICTED: F-box protein At3g07870-like [Fra...    56   5e-06
ref|XP_002531145.1| conserved hypothetical protein [Ricinus comm...    56   5e-06
gb|EMT03121.1| hypothetical protein F775_19232 [Aegilops tauschii]     56   6e-06

>gb|EXB82461.1| F-box/kelch-repeat protein [Morus notabilis]
          Length = 381

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/90 (40%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = +1

Query: 109 VGSSNGLICLAGCDRPSISICNPITREQFMLPEIKTQYCDTSKYYNWTSGFGYISSTDVY 288
           V   +G+ICLA      I +CNP TRE  +LP     Y +  +Y     GFGY S  DVY
Sbjct: 112 VSHCDGIICLADYYDGRILLCNPATREFKLLPTDPCFY-EAKEYRLANVGFGYDSIDDVY 170

Query: 289 KVVAVHVAEDDFIEVHIYTLGS-HNGWRNL 375
           KVV V        + H+YTLG+ +  WR++
Sbjct: 171 KVVCVCAWPSGEFKAHVYTLGNDYTYWRDI 200


>ref|XP_003611132.1| S-locus F-box protein [Medicago truncatula]
           gi|355512467|gb|AES94090.1| S-locus F-box protein
           [Medicago truncatula]
          Length = 464

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 12/115 (10%)
 Frame = +1

Query: 67  RRVNLIAPFEATSIVGSSNGLICLAGCDRPS-ISICNPITREQFMLPEIKTQYCDTSKYY 243
           R +   +  +   IV S NGL+CL+     S ++ICNP+TRE  +LPE+ T    TS ++
Sbjct: 121 RYITCTSSTDKFGIVNSCNGLLCLSETSTGSPLAICNPVTREFTILPELTT----TSDWF 176

Query: 244 NWT---SGFGYISSTDVYKVVAV---HV--AEDDFIE---VHIYTLGSHNGWRNL 375
           N     +GFG+   T+ YKV+ +   HV  A D   E   + I+TLG+   WRNL
Sbjct: 177 NSARVQAGFGFQPKTNEYKVIIMWNKHVRRANDLVFERLVLEIHTLGT-TSWRNL 230


>ref|XP_003611119.1| F-box family protein [Medicago truncatula]
           gi|355512454|gb|AES94077.1| F-box family protein
           [Medicago truncatula]
          Length = 560

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
 Frame = +1

Query: 61  RIRRVNLIAPFEATSIVGSSNGLICLAGCDRPS-ISICNPITREQFMLPEIKTQYCDTSK 237
           +IR   L +  +   IV S NGL+CL+     S + ICNP+TRE  +LPE+ T    TS 
Sbjct: 246 KIRYFTLTSSRDKFGIVNSCNGLLCLSETSIGSPLVICNPVTREFTILPELTT----TSD 301

Query: 238 YYNWT---SGFGYISSTDVYKVVAV---HVAED-----DFIEVHIYTLGSHNGWRNL 375
           ++N     +GFG+   T+ YKV+ +   +V  D     + + + I+TLG+ + WRN+
Sbjct: 302 WFNSARVQAGFGFQPKTNEYKVIIMWNKYVRRDNRLVFERVVLEIHTLGT-SSWRNV 357


>ref|XP_004295779.1| PREDICTED: F-box protein At3g07870-like [Fragaria vesca subsp.
           vesca]
          Length = 198

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +1

Query: 106 IVGSSNGLICLAGCDRPSISICNPITREQFMLPE-IKTQYCDTSKYYNWTSGFGYISSTD 282
           +VGS NGL+CL    R    I NPIT E  +LPE +K +         + SGFG+    D
Sbjct: 15  VVGSCNGLLCLNDLGR-RFYISNPITGESLLLPEPVKNEKI----VIPYVSGFGFSPIND 69

Query: 283 VYKVVAVHVAE-DDFIEVHIYTLGSHNGWRNLG 378
           VY V+ ++  +  D  EV + +LGS   WR++G
Sbjct: 70  VYTVLLIYTIQGSDVGEVMVLSLGSSGLWRSVG 102


>ref|XP_002531145.1| conserved hypothetical protein [Ricinus communis]
           gi|223529258|gb|EEF31230.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 427

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = +1

Query: 16  YFEYNQNNESTTPVE--RIRRVNLIAPFEATSIVGSSNGLICLAGCDRPSISICNPITRE 189
           +F     N  ++P++   IR V +I+  +  S+VGS NGL+CL   D   I I NP TR+
Sbjct: 58  FFNELFGNLCSSPLDTLEIRNVPIISQVQPVSLVGSCNGLLCLRNVDTQDICIMNPATRK 117

Query: 190 QFMLPEIKTQYC--DTSKYYNWTSGFGYISSTDVYKVVAV 303
              L  +    C  + +K      GFGY    D YKVV +
Sbjct: 118 HMYLQNLLPNNCRDEQNKVSLTGYGFGYDCVNDDYKVVRI 157


>gb|EMT03121.1| hypothetical protein F775_19232 [Aegilops tauschii]
          Length = 397

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
 Frame = +1

Query: 91  FEATSIVGSSNGLICLAGCDRP--SISICNPITREQFMLPEIKT-QYCDTSKYYNWTSGF 261
           + A S+VG+ NGL+CL     P  +I++ N +T E   +P + T Q  D S  ++    F
Sbjct: 90  YNAMSVVGTCNGLVCLYDDQVPGGAITVANRVTDEALSVPRLPTPQPADGSTSWHEAYSF 149

Query: 262 GYISSTDVYKVVAVHVAEDDFIEVHIYTLGSHNGWR 369
            Y+ +T  YKV  VHV    F  VH++TLG    WR
Sbjct: 150 TYLPATGRYKV--VHVGLHAFDAVHVFTLGKPR-WR 182


Top