BLASTX nr result

ID: Papaver25_contig00040025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00040025
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307766.2| ubiquitin family protein [Populus trichocarp...    57   2e-06

>ref|XP_002307766.2| ubiquitin family protein [Populus trichocarpa]
           gi|550339818|gb|EEE94762.2| ubiquitin family protein
           [Populus trichocarpa]
          Length = 922

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 15/114 (13%)
 Frame = -2

Query: 345 QSGEGSLDSPLLLEQLNATNKASQAAESEGTRGNVAGG--------VGRPFQINHFNL*L 190
           Q+   S+   LL    N T +ASQ +E+  +RGN+ G          G PFQ        
Sbjct: 169 QAATNSIGGMLLSNMPNVTGQASQGSETGASRGNIGGQSPAGNQTQFGHPFQS------- 221

Query: 189 SPCSLGFPLTGP-------APIPHSLSTLLEFINHMELVLRVNGDNQQISCSSI 49
           +P  +  PLT         +PIP SL+TLLEFI  ME VL  NG+    S +SI
Sbjct: 222 APQVVQVPLTAAIPVPSLHSPIPDSLNTLLEFITRMERVLAQNGNLPNTSAASI 275


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