BLASTX nr result
ID: Papaver25_contig00039956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00039956
(492 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale] 138 2e-36
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 97 2e-22
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata] 76 5e-17
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 74 1e-16
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 74 1e-16
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 73 4e-16
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic... 74 1e-15
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba] 70 2e-15
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 72 3e-15
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 70 4e-15
gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri] 67 4e-15
gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mir... 67 4e-14
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 63 7e-14
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 62 9e-14
gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra] 64 2e-13
gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parvif... 64 2e-13
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 61 2e-13
gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum] 67 1e-12
gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis] 63 1e-12
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 61 4e-12
>gb|ACJ63311.1| RNA polymerase III large subunit [Papaver orientale]
Length = 554
Score = 138 bits (347), Expect(2) = 2e-36
Identities = 75/119 (63%), Positives = 85/119 (71%), Gaps = 6/119 (5%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G+PLN DRLY+K KA SLSP EI KL AR HDMTPEG CS+AFKK
Sbjct: 403 MEGKDGTPLNLDRLYMKVKATCPARGHSSLSPAEILKLVVARLSKHDMTPEGGCSDAFKK 462
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLGKFSANVAGITLQQLQ 440
SLLD+E F + KEGGFL KC TSL NTR+ L LD K S+SL K SAN+AGITLQQLQ
Sbjct: 463 SLLDEEGFMQNKEGGFLGKCITSLKNTRRDLQLDGVKKGSESLEKVSANIAGITLQQLQ 521
Score = 40.4 bits (93), Expect(2) = 2e-36
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRLIKA EDLSI YD+TV AS
Sbjct: 361 YMSRRLIKALEDLSIHYDSTVRSAS 385
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 97.4 bits (241), Expect(2) = 2e-22
Identities = 58/120 (48%), Positives = 70/120 (58%), Gaps = 7/120 (5%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAIL-------SLSPKEIKKLADARF*AHDMTPEGDCSEAFK 260
++ K G PLN DRL++K KA SLSP EI K AD R HDMTPEG CS AFK
Sbjct: 405 MEGKEGMPLNLDRLFMKTKATFPATRAHTSLSPSEILKAADDRLSKHDMTPEGGCSAAFK 464
Query: 261 KSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLGKFSANVAGITLQQLQ 440
+SL D FL KC +L TR+ L LDE+K+ L +AN++GIT QQLQ
Sbjct: 465 ESLSD-----------FLKKCVVALRKTRRELGLDEDKVREHVLENVAANISGITSQQLQ 513
Score = 34.3 bits (77), Expect(2) = 2e-22
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+K+ EDLS YD TV +S
Sbjct: 363 YMSRRLMKSLEDLSTYYDETVRNSS 387
>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
Length = 548
Score = 76.3 bits (186), Expect(2) = 5e-17
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
+ ++ K G+PLN DR+ +KAKA SLSP EI K + R HDMTPEG CS AF
Sbjct: 403 VNMEGKNGTPLNLDRILMKAKATCPANGAFSLSPSEISKRVEDRLSKHDMTPEGGCSAAF 462
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTR--KGLPLDEE-KMDSQSLGKFSANVAGITL 428
K SL FL K + + NTR GLP+D + +L + +++++G+T
Sbjct: 463 KNSLAQ-----------FLEKQISLIQNTRCVLGLPMDANGDPNLSTLERIASDISGLTA 511
Query: 429 QQLQN*SWVCNRSY 470
QQ + C R Y
Sbjct: 512 QQFEVFMETCIRRY 525
Score = 37.0 bits (84), Expect(2) = 5e-17
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV AS
Sbjct: 363 YMSRRLMKALEDLSTHYDGTVRNAS 387
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 74.3 bits (181), Expect(2) = 1e-16
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 272
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLS 966
Query: 273 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 440
D FL K +L N R+ L L EE+ + G K + N++GIT +QLQ
Sbjct: 967 D-----------FLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Score = 37.4 bits (85), Expect(2) = 1e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDL++ YD+TV AS
Sbjct: 862 YMSRRLMKALEDLAVYYDSTVRNAS 886
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 74.3 bits (181), Expect(2) = 1e-16
Identities = 51/120 (42%), Positives = 65/120 (54%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 272
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRSSLS 966
Query: 273 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 440
D FL K +L N R+ L L EE+ + G K + N++GIT +QLQ
Sbjct: 967 D-----------FLIKNLAETLKNLRESLLLGEEQYEGDDRGYLEKIALNISGITKRQLQ 1015
Score = 37.4 bits (85), Expect(2) = 1e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDL++ YD+TV AS
Sbjct: 862 YMSRRLMKALEDLAVYYDSTVRNAS 886
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 72.8 bits (177), Expect(2) = 4e-16
Identities = 51/120 (42%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Frame = +3
Query: 111 KCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLL 272
K G PLNF RL++K KA SLS EI ++ + R HDMTPEG CSEAF+ SL
Sbjct: 907 KKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLSYHDMTPEGGCSEAFRASLS 966
Query: 273 DDEAFKEGKEGGFLYK-CTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQLQ 440
D FL K +L N R+ L L EE+ + G K N++GIT +QLQ
Sbjct: 967 D-----------FLIKSLAETLKNLRESLLLGEEQYEGDDRGYLEKIVLNISGITKKQLQ 1015
Score = 37.4 bits (85), Expect(2) = 4e-16
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDL++ YD+TV AS
Sbjct: 862 YMSRRLMKALEDLAVYYDSTVRNAS 886
>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
Length = 544
Score = 73.9 bits (180), Expect(2) = 1e-15
Identities = 52/129 (40%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Frame = +3
Query: 117 GSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLLDD 278
G+PLN D+LY K A SLSP EI L + R +DMTPEG CS AFK LLD
Sbjct: 408 GTPLNLDQLYKKVMATCPCRPQDSLSPSEIICLINERLSKYDMTPEGGCSSAFKNLLLD- 466
Query: 279 EAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQS-LGKFSANVAGITLQQLQN*SWV 455
FL+K L TR L L E+ ++ S L +AN++GI+ QQL+
Sbjct: 467 ----------FLHKHVAELRKTRIRLQLQEDHKETSSVLENVAANISGISAQQLKVFMET 516
Query: 456 CNRSYWSSK 482
C Y K
Sbjct: 517 CISRYHKKK 525
Score = 34.3 bits (77), Expect(2) = 1e-15
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+K+ EDLS+ YD TV ++
Sbjct: 361 YMSRRLMKSLEDLSLYYDQTVRSSN 385
>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
Length = 548
Score = 70.1 bits (170), Expect(2) = 2e-15
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 9/138 (6%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
+ ++ K G PLN DRL +K KA ++LSP EI + + R HDMTPEG CS AF
Sbjct: 403 VNMEGKDGPPLNLDRLLMKTKATCPANGSVALSPSEIIRKVEERLLKHDMTPEGGCSAAF 462
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRK--GLPLDEE-KMDSQSLGKFSANVAGITL 428
K SL F K S+ +R GLP+D + D L + +A+++G+T
Sbjct: 463 KSSLTK-----------FFEKSIYSIRKSRSVLGLPMDPNGEQDLSILERTAADISGLTA 511
Query: 429 QQLQN*SWVCNRSYWSSK 482
+Q + C + Y S +
Sbjct: 512 RQFEVFVETCIKRYHSKR 529
Score = 37.4 bits (85), Expect(2) = 2e-15
Identities = 18/25 (72%), Positives = 20/25 (80%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD+TV AS
Sbjct: 363 YMSRRLMKALEDLSTHYDSTVRNAS 387
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 72.0 bits (175), Expect(2) = 3e-15
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G PLN DRL++K KA SLSP EI + + R HDMTPE CS AFK+
Sbjct: 903 MEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPERGCSMAFKE 962
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQ---SLGKFSANVAGITLQQ 434
L F+ K ++ TR L LDE+ +D + L +AN++GI+ QQ
Sbjct: 963 EL-----------SNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQ 1011
Query: 435 LQ 440
L+
Sbjct: 1012 LR 1013
Score = 35.0 bits (79), Expect(2) = 3e-15
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
Y+SRRLIK+ EDLS YD+TV +S
Sbjct: 861 YLSRRLIKSLEDLSTHYDDTVRNSS 885
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 69.7 bits (169), Expect(2) = 4e-15
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
+ ++ K G+PLN DRL +K KAI +SLSP EI K + R HDMTPEG CS AF
Sbjct: 403 VNMEGKDGTPLNLDRLLMKTKAICPANGVISLSPAEISKRVEERLSKHDMTPEGGCSAAF 462
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQS---LGKFSANVAGITL 428
K SL F K + + TR L L + D + L + +++++G+T
Sbjct: 463 KNSL-----------AKFFEKHISVIRKTRCALGLPMDASDDSNFFILERIASDISGLTA 511
Query: 429 QQLQ 440
+Q +
Sbjct: 512 RQFE 515
Score = 37.0 bits (84), Expect(2) = 4e-15
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV AS
Sbjct: 363 YMSRRLMKALEDLSTHYDGTVRNAS 387
>gb|ACJ63308.1| RNA polymerase III large subunit [Drimys winteri]
Length = 547
Score = 67.4 bits (163), Expect(2) = 4e-15
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAI-------LSLSPKEIKKLADARF*AHDMTPEGDCSEAFK 260
++ K G+PLN DRL++K +A + LSP EI + A+ R HD TPEG CS AFK
Sbjct: 403 MEGKSGTPLNLDRLFMKIQATCPTTNASIPLSPSEISQYANDRLSKHDATPEGGCSSAFK 462
Query: 261 KSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEE---KMDSQSLGKFSANVAGITLQ 431
+ LLD F+++ +L N + L +D+ D L +A + I+ Q
Sbjct: 463 QMLLD-----------FIHEKIATLRNVSRILQIDDNYGGDSDGDMLQTIAAKIFSISSQ 511
Query: 432 QLQ 440
QL+
Sbjct: 512 QLK 514
Score = 39.3 bits (90), Expect(2) = 4e-15
Identities = 21/34 (61%), Positives = 25/34 (73%), Gaps = 2/34 (5%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS--VVSSNHG 96
YMSRRL+KA EDLSI YD TV AS +V ++G
Sbjct: 361 YMSRRLMKALEDLSIHYDETVRNASGGIVQFHYG 394
>gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mirabilis]
Length = 548
Score = 67.4 bits (163), Expect(2) = 4e-14
Identities = 51/138 (36%), Positives = 64/138 (46%), Gaps = 9/138 (6%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
+ ++ K G+PLN DRL +K KAI +L EI + R DM PE CS AF
Sbjct: 403 VHMEGKDGAPLNLDRLLMKTKAICPANGYDALPCSEISRKVHERLSQPDMQPEAGCSAAF 462
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQS---LGKFSANVAGITL 428
K SLL FL S+ R L L EEK DSQ L K AN+ G T
Sbjct: 463 KNSLLT-----------FLENYIVSVRKVRSALGLPEEKNDSQEHNVLEKTVANICGFTS 511
Query: 429 QQLQN*SWVCNRSYWSSK 482
+QL+ C + Y S +
Sbjct: 512 RQLEVFLETCIKRYHSKR 529
Score = 35.8 bits (81), Expect(2) = 4e-14
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV A+
Sbjct: 363 YMSRRLMKALEDLSAHYDGTVRSAN 387
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 62.8 bits (151), Expect(2) = 7e-14
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G PLNF+RL+LK KA SLS +I++ R H+ + EG CS+AFK
Sbjct: 909 MEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAEG-CSDAFKT 966
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQ 434
+L GFL +C NTR+ L L E + ++L KF+ N++GIT +Q
Sbjct: 967 NL-----------SGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQ 1015
Query: 435 LQN 443
LQ+
Sbjct: 1016 LQH 1018
Score = 39.7 bits (91), Expect(2) = 7e-14
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLSIQYD TV A+
Sbjct: 867 YMSRRLMKALEDLSIQYDETVRNAN 891
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 62.4 bits (150), Expect(2) = 9e-14
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAI------LSLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G PLNF+RL+LK KA SLS +I++ R H+ + EG CS+AFK
Sbjct: 909 MEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRLKEHNTSAEG-CSDAFKT 966
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLG---KFSANVAGITLQQ 434
+L GFL +C NTR+ L L E + ++L KF+ N++GIT +Q
Sbjct: 967 NL-----------SGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNISGITSKQ 1015
Query: 435 LQ 440
LQ
Sbjct: 1016 LQ 1017
Score = 39.7 bits (91), Expect(2) = 9e-14
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLSIQYD TV A+
Sbjct: 867 YMSRRLMKALEDLSIQYDETVRNAN 891
>gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra]
Length = 548
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Frame = +3
Query: 117 GSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLLDD 278
G+PLN DRL +K KA +LS EI + + R HDM EG CS AF +SL +
Sbjct: 410 GAPLNMDRLLMKTKATCPRKGSCALSLVEISRKVEDRLLMHDMQLEGGCSAAFSRSLSE- 468
Query: 279 EAFKEGKEGGFLYKCTTSLTNTRK--GLPLDEE-KMDSQSLGKFSANVAGITLQQLQN*S 449
F KC +S+ +TR GLP+D + S L + +A ++G+T +Q Q
Sbjct: 469 ----------FFGKCISSIRHTRSLLGLPMDANGEHGSSVLERIAAEISGLTPRQFQVFI 518
Query: 450 WVCNRSYWSSK 482
C + Y S +
Sbjct: 519 ETCIKRYHSKR 529
Score = 37.0 bits (84), Expect(2) = 2e-13
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV AS
Sbjct: 363 YMSRRLMKALEDLSTHYDGTVRNAS 387
>gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parviflorum]
Length = 546
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Frame = +3
Query: 117 GSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKKSLLDD 278
G+PLN DRL +K KA +LS EI + + R HDM EG CS AF +SL +
Sbjct: 408 GAPLNMDRLLMKTKATCPRKGSCALSLVEISRKVEDRLLMHDMQLEGGCSAAFSRSLSE- 466
Query: 279 EAFKEGKEGGFLYKCTTSLTNTRK--GLPLDEE-KMDSQSLGKFSANVAGITLQQLQN*S 449
F KC +S+ +TR GLP+D + S L + +A ++G+T +Q Q
Sbjct: 467 ----------FFGKCISSIRHTRSLLGLPMDANGEHGSSVLERIAAEISGLTPRQFQVFI 516
Query: 450 WVCNRSYWSSK 482
C + Y S +
Sbjct: 517 ETCIKRYHSKR 527
Score = 37.0 bits (84), Expect(2) = 2e-13
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV AS
Sbjct: 361 YMSRRLMKALEDLSTHYDGTVRNAS 385
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 61.2 bits (147), Expect(2) = 2e-13
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 7/134 (5%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G+PLNF+RL+LKAKA LSP+++ +L ++R DMTPEG CS AFK
Sbjct: 695 MEGKNGAPLNFERLFLKAKATCPAGGTEKLSPEKVSELVESRLSKKDMTPEGGCSAAFKN 754
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEKMDSQSLGK-FSANVAGITLQQLQ 440
SL ++F + F K T + +G KM++ + K ++G T +QL+
Sbjct: 755 SL---KSFLDNYVKAF--KRTWDPCESTEG----HAKMENSATTKNIVLQLSGATARQLE 805
Query: 441 N*SWVCNRSYWSSK 482
C Y S K
Sbjct: 806 VFLDTCISRYHSKK 819
Score = 39.7 bits (91), Expect(2) = 2e-13
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRLIKA EDL + YDNTV AS
Sbjct: 653 YMSRRLIKALEDLFVHYDNTVRNAS 677
>gb|AAS79698.1| RNA polymerase III large subunit [Psilotum nudum]
Length = 549
Score = 66.6 bits (161), Expect(2) = 1e-12
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
I ++ K G+PLN +RL LK KAI +L P E + + R HDMTPEG CS AF
Sbjct: 404 INMEGKDGTPLNLERLMLKTKAICPAFGASALPPLEYLEKVEGRLGMHDMTPEGGCSMAF 463
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRK--GLPL--DEEKMDSQSLGKFSANVAGIT 425
K+SL + F+ K ++ R GLPL +E+ D + +AN+ G+T
Sbjct: 464 KQSLAE-----------FMEKNIFAVKRIRSILGLPLYNSKEEFDLHK-ERLAANICGLT 511
Query: 426 LQQLQN*SWVCNRSYWSSK 482
+QL+ C R Y S +
Sbjct: 512 ARQLEVFLETCIRRYHSKR 530
Score = 32.0 bits (71), Expect(2) = 1e-12
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+K+ EDL YD TV S
Sbjct: 364 YMSRRLMKSLEDLYTHYDGTVRNGS 388
>gb|AAS79690.1| RNA polymerase III large subunit [Ephedra viridis]
Length = 548
Score = 62.8 bits (151), Expect(2) = 1e-12
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 9/138 (6%)
Frame = +3
Query: 96 IPLKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAF 257
+ ++ K G PLN DRL +K KA +LS E+ K D R +DM PE CS AF
Sbjct: 403 VHMEGKDGEPLNLDRLLIKTKATCPANGSPALSVSELSKRVDERLSKYDMQPEAGCSAAF 462
Query: 258 KKSLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDEEK---MDSQSLGKFSANVAGITL 428
+ SL + FL K +++ TR L L EEK D L + ++ G T
Sbjct: 463 RNSLFN-----------FLEKYISNVKKTRLTLGLSEEKNNDPDLAGLENIALDICGFTA 511
Query: 429 QQLQN*SWVCNRSYWSSK 482
+Q++ C + Y S +
Sbjct: 512 RQVEVFLETCIKRYHSKR 529
Score = 35.8 bits (81), Expect(2) = 1e-12
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+KA EDLS YD TV A+
Sbjct: 363 YMSRRLMKALEDLSTHYDGTVRSAN 387
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 60.8 bits (146), Expect(2) = 4e-12
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Frame = +3
Query: 102 LKWKCGSPLNFDRLYLKAKAIL------SLSPKEIKKLADARF*AHDMTPEGDCSEAFKK 263
++ K G PLN D+L++K A +LSP+ IK++ + + HD + +G CSE FKK
Sbjct: 910 MEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLEDKLLQHDTSSDGGCSEEFKK 969
Query: 264 SLLDDEAFKEGKEGGFLYKCTTSLTNTRKGLPLDE---EKMDSQSLGKFSANVAGITLQQ 434
+L + FL K + TR+ L L E EK DS +A ++GI+ +Q
Sbjct: 970 NLTE-----------FLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAAIISGISAKQ 1018
Query: 435 LQN*SWVCNRSYWSSK 482
LQ C Y S K
Sbjct: 1019 LQVFLDTCLSRYQSKK 1034
Score = 35.8 bits (81), Expect(2) = 4e-12
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +1
Query: 1 YMSRRLIKA*EDLSIQYDNTVHKAS 75
YMSRRL+K EDLS+ YD TV AS
Sbjct: 868 YMSRRLMKGLEDLSVFYDQTVRNAS 892