BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00039406
         (1379 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [The...   185   4e-44
ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma ca...   185   4e-44
ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   184   1e-43
gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus...   180   2e-42
ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   175   4e-41
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform...   175   4e-41
ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   173   2e-40
gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlise...   171   7e-40
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   171   7e-40
ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   170   2e-39
ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [F...   169   3e-39
ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Caps...   168   5e-39
ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [S...   168   6e-39
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   168   6e-39
ref|XP_007137778.1| hypothetical protein PHAVU_009G154800g [Phas...   167   8e-39
ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana] gi|...   167   1e-38
ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arab...   167   1e-38
ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [A...   167   1e-38
ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, part...   166   3e-38
ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [C...   165   4e-38

>ref|XP_007048481.1| Topoisomerase 3alpha isoform 2, partial [Theobroma cacao]
            gi|508700742|gb|EOX92638.1| Topoisomerase 3alpha isoform
            2, partial [Theobroma cacao]
          Length = 845

 Score =  185 bits (470), Expect = 4e-44
 Identities = 125/379 (32%), Positives = 195/379 (51%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  D F   TD  L  I+ +Q++HP+WG +A    
Sbjct: 316  FRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTD--LHAIVQEQQDHPEWGSYAQRLL 373

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E+ W  +  K++ L+ + FLA 
Sbjct: 374  DPGTSLWRNPSSGGHDDKA------HPPIHPTKFSAG-EHNWSQDHRKLYELVVRHFLAC 426

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++   D+ F++ G  I    +LD++  E+  GS +P Y   Q+F   S
Sbjct: 427  VSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTS 486

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLLS MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 487  LTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNT-RFSPTK 545

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W  +L   +E   + +  G K KD VL   L++++  F D    
Sbjct: 546  LGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLN 605

Query: 203  QLGIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            ++ ++  M   ++           +   VV QC  C++S   L+K+  GNF V CL   +
Sbjct: 606  KVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQ 665

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  + EA VTS+
Sbjct: 666  CRNAIWLPGSVLEAAVTSN 684


>ref|XP_007048480.1| Topoisomerase 3alpha isoform 1 [Theobroma cacao]
            gi|508700741|gb|EOX92637.1| Topoisomerase 3alpha isoform
            1 [Theobroma cacao]
          Length = 914

 Score =  185 bits (470), Expect = 4e-44
 Identities = 125/379 (32%), Positives = 195/379 (51%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  D F   TD  L  I+ +Q++HP+WG +A    
Sbjct: 316  FRMSSEHTMKVAEDLYQAGFISYPRTETDCFSSRTD--LHAIVQEQQDHPEWGSYAQRLL 373

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E+ W  +  K++ L+ + FLA 
Sbjct: 374  DPGTSLWRNPSSGGHDDKA------HPPIHPTKFSAG-EHNWSQDHRKLYELVVRHFLAC 426

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++   D+ F++ G  I    +LD++  E+  GS +P Y   Q+F   S
Sbjct: 427  VSQPAVGAETTVEIDIADEQFSTSGRVILERNYLDVYRYESWGGSMIPTYTLGQQFIPTS 486

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLLS MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 487  LTLDTGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDSNT-RFSPTK 545

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W  +L   +E   + +  G K KD VL   L++++  F D    
Sbjct: 546  LGEALVMGYDDMGYELWKPNLRSMMEFDMKEVSVGNKRKDEVLATCLQQMKACFLDARLN 605

Query: 203  QLGIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            ++ ++  M   ++           +   VV QC  C++S   L+K+  GNF V CL   +
Sbjct: 606  KVKLLEAMAVFFERSNQSAGDDNHVAGEVVRQCGLCRESSMVLKKNRDGNFMVGCLGFPQ 665

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  + EA VTS+
Sbjct: 666  CRNAIWLPGSVLEAAVTSN 684


>ref|XP_004502963.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cicer arietinum]
          Length = 920

 Score =  184 bits (466), Expect = 1e-43
 Identities = 125/379 (32%), Positives = 196/379 (51%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA+ LY  G ISYPRT  D+F   TD  L  I+ +Q+ HP WG +A    
Sbjct: 317  FRMSSEHTMKVAEELYQSGFISYPRTETDNFSSRTD--LHAIVQEQQGHPQWGVYAQRLL 374

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E+ W  +  K++ L+ + FLA 
Sbjct: 375  DPEAGLWRNPRGGGHDDKA------HPPIHPTKFSAG-ESGWSQDHRKLYELVVRHFLAC 427

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I    +LD++  E+  GS +P Y   Q+F   +
Sbjct: 428  VSKPAVGAETTVEIDIAGELFSACGRVILEKNYLDVYQYESWGGSIIPTYTIGQQFIPTT 487

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   PP++++DLLS MD E IGT ATMH HI+KL+D+    +++ +M  TPT+
Sbjct: 488  LTLDSGVTRPPPPLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDA-SMRFTPTN 546

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  K W   L   +E   + +  G K K  VLD +L++++  F D    
Sbjct: 547  LGEALVMGYDDMGYKLWKPYLRAVMERDMKSVSEGTKSKTEVLDTSLQQMKACFLDARLN 606

Query: 203  QLGIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            ++ ++  M   ++               VV +C  C++S   L+KS  GNF V CL   +
Sbjct: 607  KVKLLEAMGIFFERSNRSGGEEQNAIGEVVRRCGLCRESDMVLKKSRDGNFMVGCLGFPQ 666

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  ++EA VT++
Sbjct: 667  CRNAVWLPGSVSEAVVTTN 685


>gb|EYU20574.1| hypothetical protein MIMGU_mgv1a000984mg [Mimulus guttatus]
          Length = 923

 Score =  180 bits (456), Expect = 2e-42
 Identities = 124/378 (32%), Positives = 193/378 (51%), Gaps = 14/378 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS ++TM VA++LY  G ISYPRT  DSF   TD  L  I+ +Q+ HP WG +A    
Sbjct: 323  FRMSSEQTMKVAEDLYQAGFISYPRTETDSFSVRTD--LHTIVQEQQGHPTWGSYAQRLL 380

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E+ W  +  K++ L+ + FLA 
Sbjct: 381  DPEAGLWRNPSSGGHDDKA------HPPIHPTKFSAG-ESGWSQDHHKVYELVVRHFLAC 433

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA      VD+    + F++ G  I +  +LD++  E   GS +P Y   Q+F   +
Sbjct: 434  VSQPAIGAVTTVDIDIAGEQFSASGTVILAKNYLDVYRFETWGGSMIPTYNYGQQFTPTT 493

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLLS MD+  IGT ATMH HI+KL+D+    ++S  M  +PT 
Sbjct: 494  LTLDSGVTRPPPLLSEADLLSCMDNAGIGTDATMHDHIKKLLDRFYATKDS-NMRFSPTK 552

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALVKGY+ M  + W  +L   +E   + +  G K K  VLD+ L++++  F D    
Sbjct: 553  LGEALVKGYDDMGYELWKPNLRAMMESDMKAVSMGTKRKSEVLDSCLQQMKACFVDARLN 612

Query: 203  QLGIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            +  +   M+  ++               VV +C  C++S   L+K   GNF V CL   +
Sbjct: 613  KEKLFEAMDVFFERSNRANGNEQQAIGEVVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQ 672

Query: 62   CSSTYCCPSCIAEADVTS 9
            C +    P  ++EA VT+
Sbjct: 673  CRNVVWLPGSVSEATVTT 690


>ref|XP_006581777.1| PREDICTED: DNA topoisomerase 3-alpha isoform X3 [Glycine max]
          Length = 910

 Score =  175 bits (444), Expect = 4e-41
 Identities = 124/380 (32%), Positives = 195/380 (51%), Gaps = 15/380 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS D TM VA+ LY  G ISYPRT  DSF   TD  L  I+ +Q+ HP+WG +A    
Sbjct: 313  FRMSSDHTMKVAEELYQAGFISYPRTETDSFSPGTD--LHTIVQEQQGHPEWGIYAQRLM 370

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  + G E+ W  +  K++ L+ + FLA 
Sbjct: 371  DPEAGLWRNPRGGGHDDKA------HPPIYPTKFSTG-ESGWSQDHRKLYELVVRHFLAC 423

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I    +LD++  E+  GS +P Y   Q+F    
Sbjct: 424  VSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTK 483

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSE--KIGTPATMHRHIQKLIDKKLIERNSGTMEITP 387
            ++    ++   P ++++DLLS+MD E  KIGT ATM  HI+K++D+    ++S T   TP
Sbjct: 484  LTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSST-RFTP 542

Query: 386  THLGLALVKGYN--CMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRD 216
            T+LG ALV GY+   M  K W  DL   +E+    +  G K K  VL   L+K+E  F +
Sbjct: 543  TNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLE 602

Query: 215  ILNGQLGIVRGMEQTWDIKTN--------VVDQCPDCKQSCRKLQKS-GGNFRVVCLN-T 66
                ++ ++  M   ++  ++        VV +C  C++S   L+K+  GNF V C+   
Sbjct: 603  ARLNKVKLLEAMAIFFERSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCMGYP 662

Query: 65   RCSSTYCCPSCIAEADVTSD 6
            +C +    P  ++EA VT++
Sbjct: 663  QCRNAVWLPGSVSEAVVTTN 682


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha isoform X1 [Glycine max]
            gi|571460704|ref|XP_006581776.1| PREDICTED: DNA
            topoisomerase 3-alpha isoform X2 [Glycine max]
          Length = 913

 Score =  175 bits (444), Expect = 4e-41
 Identities = 125/383 (32%), Positives = 194/383 (50%), Gaps = 18/383 (4%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS D TM VA+ LY  G ISYPRT  DSF   TD  L  I+ +Q+ HP+WG +A    
Sbjct: 313  FRMSSDHTMKVAEELYQAGFISYPRTETDSFSPGTD--LHTIVQEQQGHPEWGIYAQRLM 370

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  + G E+ W  +  K++ L+ + FLA 
Sbjct: 371  DPEAGLWRNPRGGGHDDKA------HPPIYPTKFSTG-ESGWSQDHRKLYELVVRHFLAC 423

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I    +LD++  E+  GS +P Y   Q+F    
Sbjct: 424  VSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFNPTK 483

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSE--KIGTPATMHRHIQKLIDKKLIERNSGTMEITP 387
            ++    ++   P ++++DLLS+MD E  KIGT ATM  HI+K++D+    ++S T   TP
Sbjct: 484  LTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSST-RFTP 542

Query: 386  THLGLALVKGYN--CMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRD 216
            T+LG ALV GY+   M  K W  DL   +E+    +  G K K  VL   L+K+E  F +
Sbjct: 543  TNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACFLE 602

Query: 215  ILNGQLGIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKLQKS-GGNFRVVCL 72
                ++ ++  M   ++  T            VV +C  C++S   L+K+  GNF V C+
Sbjct: 603  ARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVGCM 662

Query: 71   N-TRCSSTYCCPSCIAEADVTSD 6
               +C +    P  ++EA VT++
Sbjct: 663  GYPQCRNAVWLPGSVSEAVVTTN 685


>ref|XP_004136599.1| PREDICTED: DNA topoisomerase 3-alpha-like [Cucumis sativus]
          Length = 925

 Score =  173 bits (438), Expect = 2e-40
 Identities = 124/381 (32%), Positives = 192/381 (50%), Gaps = 15/381 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  D F + TD  L  I+ +Q+EH  WG +A    
Sbjct: 318  FRMSSEHTMKVAEDLYQAGFISYPRTETDCFSQRTD--LHGIVREQQEHQIWGAYAQRLL 375

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E  W  +  +++ L+ + FLA 
Sbjct: 376  DPESRLWRNPSGGGHDDKA------HPPIHPTKFSAG-ERGWSQDHHRLYELVVRHFLAC 428

Query: 740  LSDPAYTRKFAVDMGFGDKSFA-SRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIP 564
            +S PA      V++    + F+ S+  N     +LD++  E+  GS +P Y   Q+F   
Sbjct: 429  VSQPAVGAVTTVEIDIAGELFSTSKRANSILRNYLDVYRFESWGGSTIPTYVSGQQFVPT 488

Query: 563  SISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPT 384
            +++    ++   P ++++DLLS MD E IGT ATMH HI+KL+D+    +++ T   TPT
Sbjct: 489  TLTLDSGVTRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANT-RFTPT 547

Query: 383  HLGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILN 207
            +LG ALV GY+ M    W  +L   +E   + +  G K KD VL + L++++  F D   
Sbjct: 548  NLGEALVMGYDDMGYNLWKPNLRAIMEHEMKAVSEGTKRKDEVLASCLQQMKTCFLDARV 607

Query: 206  GQLGIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-T 66
             +  ++  ME  ++               VV  C  C+ S   L+++  GN+ V CL   
Sbjct: 608  NKQKLLEAMEVFFERSNGSGGDENRAVGEVVQLCGLCQDSDMVLKRNRDGNYMVGCLGFP 667

Query: 65   RCSSTYCCPSCIAEADVTSDQ 3
            +C +    P  IAEA VTSD+
Sbjct: 668  QCRNVVWLPGSIAEATVTSDR 688


>gb|EPS73635.1| hypothetical protein M569_01118, partial [Genlisea aurea]
          Length = 813

 Score =  171 bits (433), Expect = 7e-40
 Identities = 120/378 (31%), Positives = 192/378 (50%), Gaps = 14/378 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS ++TM VA++LY  G ISYPRT  D F + TD  L+ I+ +Q+ HP WG +A    
Sbjct: 221  FRMSSEQTMKVAEDLYQAGFISYPRTETDCFSERTD--LRTIVQEQQGHPAWGSYAQRLL 278

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +  K++ L+ + FLA 
Sbjct: 279  DPETGLWKNPGAGGHDDKA------HPPIHPTKFSSG-ESGWSQDHHKVYELVVRHFLAC 331

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +LD++  E   GS +P Y   Q+F   +
Sbjct: 332  VSQPAIGAETTVEIDIASEQFSASGRAIIAKNYLDVYRFEKWGGSLIPAYAYGQQFIPTT 391

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLL  MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 392  LTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDSNT-RFSPTK 450

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W   L   +E   + +  G K K  VL+A L++++  F D    
Sbjct: 451  LGEALVMGYDDMGYELWKPHLRAMMESDMKSVSMGTKRKGEVLEACLQQMKACFLDARAN 510

Query: 203  QLGIVRGM---------EQTWD--IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            +  +   M          QT D  +  ++V +C  C++S   L+K   GNF V CL   +
Sbjct: 511  KEKLFEAMGVFFERSNRSQTADQHMSGDIVRKCGLCQESDMVLRKKPDGNFMVGCLGYPQ 570

Query: 62   CSSTYCCPSCIAEADVTS 9
            C +    P  ++ A VT+
Sbjct: 571  CRNVVWLPGSVSSASVTT 588


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  171 bits (433), Expect = 7e-40
 Identities = 117/376 (31%), Positives = 190/376 (50%), Gaps = 14/376 (3%)
 Frame = -1

Query: 1094 MSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXXXX 915
            MS ++TM VA++LY  G ISYPRT  D F   TD  L  I+ DQ+ HP WG +A      
Sbjct: 317  MSSEQTMKVAEDLYQSGFISYPRTETDGFSSRTD--LHTIVRDQQAHPIWGSYAQRLLDP 374

Query: 914  XXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLASLS 735
                          D        H PI PT  + G E  W  +  +++ L+ + FLA +S
Sbjct: 375  GTGLWRNPSTGGHDDKA------HPPIHPTKFSPG-ETGWSQDHHRVYELVVRHFLACVS 427

Query: 734  DPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPSIS 555
             PA   +  V++    + F++ G  I +  +LD++  E+  GS +P Y   Q+F   +++
Sbjct: 428  QPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTTLT 487

Query: 554  RGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTHLG 375
                ++   P +++SDLLS MD   IGT ATMH HI+KL+D+    +++ T   +PT+LG
Sbjct: 488  LDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANT-RFSPTNLG 546

Query: 374  LALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNGQL 198
             ALV GY+ M  + W  +L   +E   + +  G K K  VL+  L++++  F D    ++
Sbjct: 547  EALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDARINKV 606

Query: 197  GIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TRCS 57
             ++  M   ++              ++V QC  C+++   L+++  GNF V C+   +C 
Sbjct: 607  KLLEAMAVFFERSDRSSGNDNHATVDIVRQCGLCRETNMVLRRNRDGNFMVGCMGYPQCR 666

Query: 56   STYCCPSCIAEADVTS 9
            +    P  I EA VT+
Sbjct: 667  NAIWLPGPIIEATVTT 682


>ref|XP_006341743.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum tuberosum]
          Length = 915

 Score =  170 bits (430), Expect = 2e-39
 Identities = 121/379 (31%), Positives = 192/379 (50%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS ++TM VA++LY  G ISYPRT  DSF + TD  L+ ++ +QE HP WG +A    
Sbjct: 322  FRMSSEQTMKVAEDLYQNGFISYPRTETDSFSEKTD--LRTMVQEQEGHPVWGIYAQRLL 379

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E  W  +  +++ L+ + FLA 
Sbjct: 380  DPQSGLWRNPSGGGHDDKA------HPPIHPTKFSAG-ETRWSQDHHRVYELVVRHFLAC 432

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    +SF++ G  I +  +LD++  E+  GS +P Y   Q+F   +
Sbjct: 433  VSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTT 492

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLL  MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 493  LTLDSGVTRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNT-RFSPTK 551

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W   L   +E   + +  G K K  VL+  L++++  F D    
Sbjct: 552  LGEALVMGYDDMGYELWKPYLRAMMECDMKAVSIGTKRKAEVLETCLQQMKACFSDARTN 611

Query: 203  QLGIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKL-QKSGGNFRVVCLN-TR 63
            +  ++  M   ++              +VV +C  C +S   L QK  GNF V CL   +
Sbjct: 612  KGKLLEAMAIFFERSNRSSGGEQQAVGDVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQ 671

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  ++EA VT +
Sbjct: 672  CRNVVWLPGSVSEASVTEN 690


>ref|XP_004289288.1| PREDICTED: DNA topoisomerase 3-alpha-like [Fragaria vesca subsp.
            vesca]
          Length = 908

 Score =  169 bits (428), Expect = 3e-39
 Identities = 115/379 (30%), Positives = 189/379 (49%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA+ LY  G ISYPRT  D F   TD  L  I+ +Q+ HP WG +A    
Sbjct: 313  FRMSSEHTMKVAEELYQAGFISYPRTETDGFSPRTD--LHAIVQEQQGHPGWGSYAQRLL 370

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E+ W  +  +++ L+ + FLA 
Sbjct: 371  DPASGLWRNPSSGGHDDKA------HPPIHPTKFSAG-ESNWSQDHNRLYELVVRHFLAC 423

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +LD++  E+  GS LP Y   Q+F   +
Sbjct: 424  VSQPAVGAETTVEIDIAGEMFSASGRVILAKNYLDVYRFESWGGSLLPTYAVGQQFMPTT 483

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLL  MD E IGT ATMH HI+KL+D+    +++ T   +PT+
Sbjct: 484  LTLDSGVTRPPPLLSEADLLGCMDKEGIGTDATMHDHIKKLLDRFYATKDANT-RFSPTN 542

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  K W   L   +E   + +  G K K  VL+  L++++  F D    
Sbjct: 543  LGEALVMGYDDMGYKLWKPYLRAVMERDMKAVSEGNKSKAEVLETCLQQMKGCFLDARQN 602

Query: 203  QLGIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            ++ +   M   ++                + +C  C+++   L+K+  GNF V C+   +
Sbjct: 603  KVKLFEAMAVFFERSNRPGGDDQHTSGEFIRRCGLCQEADMVLRKNRDGNFMVGCMGYPQ 662

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  ++EA  T++
Sbjct: 663  CRNAIWLPGSVSEAVATTN 681


>ref|XP_006279975.1| hypothetical protein CARUB_v10025845mg [Capsella rubella]
            gi|482548679|gb|EOA12873.1| hypothetical protein
            CARUB_v10025845mg [Capsella rubella]
          Length = 919

 Score =  168 bits (426), Expect = 5e-39
 Identities = 116/379 (30%), Positives = 191/379 (50%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            +++S + TM VA+ LY  G ISYPRT  D+F   TD  L+ ++ +Q  HP+WG +A    
Sbjct: 320  FRLSSEHTMKVAEELYQAGFISYPRTETDAFSSRTD--LRAMVEEQTRHPEWGAYAQRLL 377

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +   ++ L+ + +LA 
Sbjct: 378  EPEGGLWRNPGNGGHDDKA------HPPIHPTKFSSG-ESNWSRDHLNVYELVVRHYLAC 430

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +L+++  E+  GS +P YE  Q+F   S
Sbjct: 431  VSQPAVAAETTVEIDISGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTS 490

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P + ++DLLS MD   IGT ATMH HI+KL+D+    +++ T   +PT+
Sbjct: 491  LTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT-RFSPTN 549

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W  +L   +E     +  G K K  VL+  L++++  F D    
Sbjct: 550  LGEALVMGYDDMGYELWKPNLRAIMEHDMNEVSVGRKTKAEVLETCLQQMKACFLDARVK 609

Query: 203  QLGIVRGMEQTWDIKTN-----------VVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            +  ++  M   ++   N           VV +C  C +S   L+K+  GNF V C+N  +
Sbjct: 610  KSKLLEAMTIFFERSNNTDEGENQTAGEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQ 669

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P    EA VT++
Sbjct: 670  CRNAVWLPGPTLEASVTTN 688


>ref|XP_004239191.1| PREDICTED: DNA topoisomerase 3-alpha-like [Solanum lycopersicum]
          Length = 910

 Score =  168 bits (425), Expect = 6e-39
 Identities = 120/379 (31%), Positives = 189/379 (49%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS ++TM VA++LY  G ISYPRT  D F   TD  L+ ++ +QE HP WG +A    
Sbjct: 322  FRMSSEQTMKVAEDLYQNGFISYPRTETDCFSDKTD--LRTMVQEQEGHPVWGTYAQRLL 379

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  +AG E  W  +  +++ L+ + FLA 
Sbjct: 380  DPQSGLWRNPSGGGHDDKA------HPPIHPTKFSAG-ETRWSQDHHRVYELVVRHFLAC 432

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    +SF++ G  I +  +LD++  E+  GS +P Y   Q+F   +
Sbjct: 433  VSQPAVGAETIVEIDIAGESFSACGRVILAKNYLDVYRFESWGGSVIPTYSFGQQFTPTT 492

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    +    P ++++DLL  MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 493  LTLDSGVIRPPPLLSEADLLGCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNT-RFSPTK 551

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W   L   +E   + + +G K K  VL+  L++++  F D    
Sbjct: 552  LGEALVMGYDDMGYELWKPYLRAMMECDMKAVSTGTKRKAEVLETCLQQMKACFSDARTN 611

Query: 203  QLGIVRGMEQTWDIKTN-----------VVDQCPDCKQSCRKL-QKSGGNFRVVCLN-TR 63
            +  ++  M   ++               VV +C  C +S   L QK  GNF V CL   +
Sbjct: 612  KEKLLEAMAIFFERSNRSSSGEQQAVGAVVRRCGLCLESDMVLRQKPDGNFMVGCLGYPQ 671

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P  ++EA VT +
Sbjct: 672  CRNVVWLPGSVSEASVTEN 690


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  168 bits (425), Expect = 6e-39
 Identities = 120/376 (31%), Positives = 192/376 (51%), Gaps = 14/376 (3%)
 Frame = -1

Query: 1094 MSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXXXX 915
            MS + TM VA++LY  G ISYPRT  D F + TD  L  I+ +Q  HP WG +A      
Sbjct: 314  MSSEHTMKVAEDLYQTGFISYPRTETDYFSERTD--LHGIVQEQLGHPIWGSYAQRLLDP 371

Query: 914  XXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLASLS 735
                          D        H PI PT  +AG E+ W  + ++++ L+ + FLA +S
Sbjct: 372  GAGLWRNPSNGGHDDKA------HPPIHPTKFSAG-ESGWSQDHQRLYELVVRHFLACVS 424

Query: 734  DPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPSIS 555
             PA   +  V++    +SF+S G  I +  +LD++  E+  GS +P Y   Q+F   +++
Sbjct: 425  QPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLT 484

Query: 554  RGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTHLG 375
                ++   P ++++DLL+ MD   IGT ATMH HI+KL+D+    ++S T   +PT+LG
Sbjct: 485  LDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNT-RFSPTNLG 543

Query: 374  LALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNGQL 198
             ALV GY+ M  + W   L   +E   + +  G K ++ VL   L++++  F D    ++
Sbjct: 544  EALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKV 603

Query: 197  GIVRGMEQTWDIKT-----------NVVDQCPDCKQSCRKL-QKSGGNFRVVCLN-TRCS 57
             ++  M   ++              +VV QC  C++S   L +K  GNF V CL   +C 
Sbjct: 604  KLLEAMALFFERSNRSSGDEQHEVGDVVRQCTLCQESDMVLRRKPDGNFMVGCLGYPQCR 663

Query: 56   STYCCPSCIAEADVTS 9
            +    P  I+EA +T+
Sbjct: 664  NVVWLPGSISEAAITT 679


>ref|XP_007137778.1| hypothetical protein PHAVU_009G154800g [Phaseolus vulgaris]
            gi|561010865|gb|ESW09772.1| hypothetical protein
            PHAVU_009G154800g [Phaseolus vulgaris]
          Length = 693

 Score =  167 bits (424), Expect = 8e-39
 Identities = 117/356 (32%), Positives = 181/356 (50%), Gaps = 13/356 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA+ LY  G ISYPRT  D+F   TD  L  I+ +Q+ HP+WG +A    
Sbjct: 312  FRMSSEHTMKVAEELYQAGFISYPRTETDNFSSRTD--LHTIVQEQQGHPEWGVYAQRLL 369

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  + G E+ W  +  K++ L+ + FLA 
Sbjct: 370  DPGTGLWRNPRGGGHDDKA------HPPIHPTKFSTG-ESGWSQDHRKLYELVVRHFLAC 422

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I    +LD+++ E+  GS +P Y   Q+F   +
Sbjct: 423  VSKPAIGAETTVEIDIAGELFSACGRVILEKNYLDVYHYESWGGSLIPTYTIGQQFIPTT 482

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            +     ++   P ++++DLLS+MD E IGT ATMH HI+KL+D+    +++ T   TPT+
Sbjct: 483  LILDSGVTRPPPLLSEADLLSYMDKEGIGTDATMHDHIKKLLDRFYATKDANT-RFTPTN 541

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  K W   L   +E   + +  G K K  VL  +L+ +E  F D    
Sbjct: 542  LGEALVMGYDDMGYKLWKPYLRAVMERDMKFVSEGNKSKADVLATSLQLMEACFLDARLN 601

Query: 203  QLGIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCL 72
            ++ ++  M   ++               VV QC  C++S   L+K+  GNF V CL
Sbjct: 602  KVKLLEAMAIFFERSGRSGNDELHAMGEVVRQCGLCQESDMVLRKNRDGNFMVGCL 657


>ref|NP_201197.1| topoisomerase 3alpha [Arabidopsis thaliana]
            gi|8777305|dbj|BAA96895.1| DNA topoisomerase III
            [Arabidopsis thaliana] gi|169218912|gb|ACA50279.1|
            topoisomerase 3 alpha [Arabidopsis thaliana]
            gi|332010433|gb|AED97816.1| topoisomerase 3alpha
            [Arabidopsis thaliana]
          Length = 926

 Score =  167 bits (423), Expect = 1e-38
 Identities = 116/379 (30%), Positives = 190/379 (50%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            +++S + TM VA+ LY  G ISYPRT  DSF   TD  L+ ++ +Q  HP WG +A    
Sbjct: 320  FRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTD--LRAMVEEQTRHPAWGSYAQRLL 377

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +   ++ L+ + +LA 
Sbjct: 378  EPEGGLWRNPANGGHDDKA------HPPIHPTKFSSG-ESNWSRDHLNVYELVVRHYLAC 430

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +L+++  E+  GS +P YE  Q+F   +
Sbjct: 431  VSQPAVAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTT 490

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P + ++DLLS MD   IGT ATMH HI+KL+D+    +++ T   +PT+
Sbjct: 491  LTLDAAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT-RFSPTN 549

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W  +L   +E     +  G K K  VL+  L++++  F D    
Sbjct: 550  LGEALVMGYDDMGYELWKPNLRALMEHDMNEVSVGRKTKAEVLETCLQQMKACFLDARVK 609

Query: 203  QLGIVRGMEQTWDIKTN-----------VVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            +  ++  M   ++   N           VV +C  C +S   L+K+  GNF V C+N  +
Sbjct: 610  KSKLLEAMTIFFERSNNTDESESQTAGEVVRRCNLCNESDMALRKNRDGNFMVGCMNYPQ 669

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P    EA VT++
Sbjct: 670  CRNAVWLPGPTLEASVTTN 688


>ref|XP_002864876.1| hypothetical protein ARALYDRAFT_496584 [Arabidopsis lyrata subsp.
            lyrata] gi|297310711|gb|EFH41135.1| hypothetical protein
            ARALYDRAFT_496584 [Arabidopsis lyrata subsp. lyrata]
          Length = 923

 Score =  167 bits (423), Expect = 1e-38
 Identities = 116/379 (30%), Positives = 189/379 (49%), Gaps = 14/379 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            +++S + TM VA+ LY  G ISYPRT  DSF   TD  L  ++ +Q  HP WG +A    
Sbjct: 320  FRLSSEHTMKVAEELYQAGFISYPRTETDSFSSRTD--LCAMVEEQRRHPAWGSYAQRLL 377

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +   ++ L+ + +LA 
Sbjct: 378  EPEGGLWRNPGNGGHDDKA------HPPIHPTKFSSG-ESNWSRDHLNVYELVVRHYLAC 430

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +L+++  E+  GS +P YE  Q+F   +
Sbjct: 431  VSQPAKAAETTVEIDIAGERFSASGRAILAKNYLEVYRFESWGGSVIPVYEKGQQFIPTT 490

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P + ++DLLS MD   IGT ATMH HI+KL+D+    +++ T   +PT+
Sbjct: 491  LTLDSAVTRPPPLLCEADLLSCMDKAGIGTDATMHDHIKKLLDRGYATKDANT-RFSPTN 549

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+ M  + W  +L   +E     +  G K K  VL+  L++++  F D    
Sbjct: 550  LGEALVMGYDDMGYELWKPNLRALMERDMNEVSVGRKTKAEVLETCLQQMKACFLDARVK 609

Query: 203  QLGIVRGMEQTWDIKTN-----------VVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TR 63
            +  ++  M   ++   N           V+ +C  C +S   L+K+  GNF V C+N  +
Sbjct: 610  KSKLLEAMTIFFERSNNTDESESQTAGEVIRRCNLCNESDMALRKNRDGNFMVGCMNYPQ 669

Query: 62   CSSTYCCPSCIAEADVTSD 6
            C +    P    EA VT+D
Sbjct: 670  CRNAVWLPGPTLEASVTTD 688


>ref|XP_006829322.1| hypothetical protein AMTR_s00202p00033660 [Amborella trichopoda]
            gi|548834342|gb|ERM96738.1| hypothetical protein
            AMTR_s00202p00033660 [Amborella trichopoda]
          Length = 988

 Score =  167 bits (422), Expect = 1e-38
 Identities = 118/377 (31%), Positives = 187/377 (49%), Gaps = 14/377 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  DSF   TD  LQ ++ +Q+ HP+WG +A    
Sbjct: 391  FRMSSEHTMKVAEDLYQAGFISYPRTETDSFSPNTD--LQALVREQQGHPEWGSYAQRLL 448

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                                     H PI PT  +AG E++W  +  +++ L+ + FLA 
Sbjct: 449  SPEGLWRNPSSGGHDDKA-------HPPIHPTKFSAG-ESSWSPDHHRLYELVVRHFLAC 500

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA      V++    + F + G  I    +L+++  E+  GS +P Y   Q+F    
Sbjct: 501  VSQPAIGAGTTVEIDIAGEVFVASGLMIIEKNYLEVYRFESWGGSTIPTYAFGQQFIPTR 560

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P +++SDLLS MD   IGT ATMH HI+KL+D+    ++S T   +PT 
Sbjct: 561  LTLDSSVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDSNT-RFSPTT 619

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            LG ALV GY+CM    W  +L   +E   + +  G K K  VL + L++++  F D+ + 
Sbjct: 620  LGEALVMGYDCMGWDLWKPNLRSAMESDMKAVSEGRKTKSEVLASCLQQMKDCFLDVKSH 679

Query: 203  QLGIVRGMEQTWD-----------IKTNVVDQCPDCKQSCRKL-QKSGGNFRVVCLN-TR 63
            +  +   M   ++           +    V  C  C++S   L ++  G+F V CL    
Sbjct: 680  KAKLFETMGIFFERSNTPGGDNLHLAGGKVRSCQQCQESEMVLRRRPDGSFMVGCLRFPL 739

Query: 62   CSSTYCCPSCIAEADVT 12
            C +    P  I+EA VT
Sbjct: 740  CRNVVWLPGAISEALVT 756


>ref|XP_006432122.1| hypothetical protein CICLE_v10003112mg, partial [Citrus clementina]
            gi|557534244|gb|ESR45362.1| hypothetical protein
            CICLE_v10003112mg, partial [Citrus clementina]
          Length = 794

 Score =  166 bits (419), Expect = 3e-38
 Identities = 119/377 (31%), Positives = 191/377 (50%), Gaps = 12/377 (3%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  DSF   T+  L  I+ +Q  HPDWG +A    
Sbjct: 318  FRMSSEHTMKVAEDLYQAGFISYPRTETDSFSSGTN--LHGIVQEQIGHPDWGPYAQRLL 375

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +  K++ L+ + FLA 
Sbjct: 376  DHAAGLWRNPGSGGHDDKA------HPPIHPTKFSSG-ESRWSQDHYKLYELVVRHFLAC 428

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +LD++  E+  G  +P Y   Q+F   +
Sbjct: 429  VSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVHGQQFIPTT 488

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLLS MD   IGT ATMH HI+KL+D+    +++ T    PT+
Sbjct: 489  LTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDANT-RFAPTN 547

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            +G ALV GY+ M  + W  +L   +E   + +  G K K  VL   L++++  F D    
Sbjct: 548  IGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKACFLDARLK 607

Query: 203  QLGIVRGME---QTW------DIKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TRCS 57
            ++ ++  M    + W           VV QC  C++S   L+KS  GN  V CL   +C 
Sbjct: 608  KVKLLEAMGIFFERWSGGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMVGCLAFPQCR 667

Query: 56   STYCCPSCIAEADVTSD 6
            +    P  ++EA VT++
Sbjct: 668  NAVWLPGSVSEAAVTTN 684


>ref|XP_006465105.1| PREDICTED: DNA topoisomerase 3-alpha-like [Citrus sinensis]
          Length = 940

 Score =  165 bits (418), Expect = 4e-38
 Identities = 118/376 (31%), Positives = 190/376 (50%), Gaps = 11/376 (2%)
 Frame = -1

Query: 1100 WKMSPDRTMVVAQNLYARGRISYPRTTDDSFEKFTDIELQRILYDQEEHPDWGEHAXXXX 921
            ++MS + TM VA++LY  G ISYPRT  DSF   T+  L  I+ +Q  HPDWG +A    
Sbjct: 348  FRMSSEHTMKVAEDLYQAGFISYPRTETDSFSSGTN--LHGIVQEQIGHPDWGPYAQRLL 405

Query: 920  XXXXXXXXXXXXXXXRDIPRTRAIPHTPIIPTMGTAGTENTWKDEEEKMFRLITQCFLAS 741
                            D        H PI PT  ++G E+ W  +  K++ L+ + FLA 
Sbjct: 406  DHAAGLWRNPGSGGHDDKA------HPPIHPTKFSSG-ESRWSQDHYKLYELVVRHFLAC 458

Query: 740  LSDPAYTRKFAVDMGFGDKSFASRGENITSPGFLDIFNSENLVGSDLPNYEGKQEFKIPS 561
            +S PA   +  V++    + F++ G  I +  +LD++  E+  G  +P Y   Q+F   +
Sbjct: 459  VSQPAVGAETIVEINIAGEVFSTSGRVILAKNYLDVYRFESWGGLVIPTYVHGQQFIPTT 518

Query: 560  ISRGPLISMSAPPVTDSDLLSFMDSEKIGTPATMHRHIQKLIDKKLIERNSGTMEITPTH 381
            ++    ++   P ++++DLLS MD   IGT ATMH HI+KL+D+    +++ T    PT+
Sbjct: 519  LTLDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYAIKDANT-RFAPTN 577

Query: 380  LGLALVKGYNCMVNKNWWRDLIGYIEEGKRRILSG-KDKDLVLDATLKKLEIWFRDILNG 204
            +G ALV GY+ M  + W  +L   +E   + +  G K K  VL   L++++  F D    
Sbjct: 578  IGEALVMGYDDMGYELWKPNLRSMMESDMKEVSVGNKSKADVLANCLQQMKACFLDARLK 637

Query: 203  QLGIVRGM--------EQTWDIKTNVVDQCPDCKQSCRKLQKS-GGNFRVVCLN-TRCSS 54
            ++ ++  M         +       VV QC  C++S   L+KS  GN  V CL   +C +
Sbjct: 638  KVKLLEAMGIFFERSGGEDQQAAGEVVRQCGICQESNMVLKKSRDGNLMVGCLAFPQCRN 697

Query: 53   TYCCPSCIAEADVTSD 6
                P  ++EA VT++
Sbjct: 698  AVWLPGSVSEAAVTTN 713